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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:CHST11-PTPRR (FusionGDB2 ID:16689) |
Fusion Gene Summary for CHST11-PTPRR |
Fusion gene summary |
Fusion gene information | Fusion gene name: CHST11-PTPRR | Fusion gene ID: 16689 | Hgene | Tgene | Gene symbol | CHST11 | PTPRR | Gene ID | 50515 | 5801 |
Gene name | carbohydrate sulfotransferase 11 | protein tyrosine phosphatase receptor type R | |
Synonyms | C4ST|C4ST-1|C4ST1|HSA269537|OCBMD | EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ | |
Cytomap | 12q23.3 | 12q15 | |
Type of gene | protein-coding | protein-coding | |
Description | carbohydrate sulfotransferase 11C4S-1IgH/CHST11 fusioncarbohydrate (chondroitin 4) sulfotransferase 11chondroitin 4-O-sulfotransferase 1 | receptor-type tyrosine-protein phosphatase RCh-1 PTPaseNC-PTPCOM1R-PTP-Rch-1PTPaseprotein tyrosine phosphatase Cr1PTPaseprotein-tyrosine phosphatase NC-PTPCOM1protein-tyrosine phosphatase PCPTP1 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000303694, ENST00000546689, ENST00000547956, ENST00000549260, ENST00000550711, | ENST00000342084, ENST00000378778, ENST00000440835, ENST00000537619, ENST00000549308, ENST00000283228, | |
Fusion gene scores | * DoF score | 13 X 8 X 6=624 | 38 X 16 X 13=7904 |
# samples | 15 | 42 | |
** MAII score | log2(15/624*10)=-2.05658352836637 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(42/7904*10)=-4.23412171391856 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: CHST11 [Title/Abstract] AND PTPRR [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | CHST11(104995769)-PTPRR(71158558), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | CHST11 | GO:0030206 | chondroitin sulfate biosynthetic process | 11056388 |
Fusion gene breakpoints across CHST11 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across PTPRR (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | SARC | TCGA-DX-A2IZ-01A | CHST11 | chr12 | 104995769 | - | PTPRR | chr12 | 71158558 | - |
ChimerDB4 | SARC | TCGA-DX-A2IZ-01A | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
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Fusion Gene ORF analysis for CHST11-PTPRR |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000303694 | ENST00000342084 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000303694 | ENST00000378778 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000303694 | ENST00000440835 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000303694 | ENST00000537619 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000303694 | ENST00000549308 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000546689 | ENST00000342084 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000546689 | ENST00000378778 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000546689 | ENST00000440835 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000546689 | ENST00000537619 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000546689 | ENST00000549308 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000547956 | ENST00000342084 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000547956 | ENST00000378778 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000547956 | ENST00000440835 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000547956 | ENST00000537619 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000547956 | ENST00000549308 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000549260 | ENST00000342084 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000549260 | ENST00000378778 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000549260 | ENST00000440835 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000549260 | ENST00000537619 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
5CDS-intron | ENST00000549260 | ENST00000549308 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
In-frame | ENST00000303694 | ENST00000283228 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
In-frame | ENST00000546689 | ENST00000283228 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
In-frame | ENST00000547956 | ENST00000283228 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
In-frame | ENST00000549260 | ENST00000283228 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
intron-3CDS | ENST00000550711 | ENST00000283228 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
intron-intron | ENST00000550711 | ENST00000342084 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
intron-intron | ENST00000550711 | ENST00000378778 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
intron-intron | ENST00000550711 | ENST00000440835 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
intron-intron | ENST00000550711 | ENST00000537619 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
intron-intron | ENST00000550711 | ENST00000549308 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000547956 | CHST11 | chr12 | 104995769 | + | ENST00000283228 | PTPRR | chr12 | 71158558 | - | 3569 | 850 | 814 | 2466 | 550 |
ENST00000549260 | CHST11 | chr12 | 104995769 | + | ENST00000283228 | PTPRR | chr12 | 71158558 | - | 3349 | 630 | 12 | 2246 | 744 |
ENST00000303694 | CHST11 | chr12 | 104995769 | + | ENST00000283228 | PTPRR | chr12 | 71158558 | - | 3362 | 643 | 10 | 2259 | 749 |
ENST00000546689 | CHST11 | chr12 | 104995769 | + | ENST00000283228 | PTPRR | chr12 | 71158558 | - | 3389 | 670 | 673 | 2286 | 537 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000547956 | ENST00000283228 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - | 0.000458559 | 0.9995415 |
ENST00000549260 | ENST00000283228 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - | 0.004047381 | 0.9959526 |
ENST00000303694 | ENST00000283228 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - | 0.001936577 | 0.9980634 |
ENST00000546689 | ENST00000283228 | CHST11 | chr12 | 104995769 | + | PTPRR | chr12 | 71158558 | - | 0.000416802 | 0.9995832 |
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Fusion Genomic Features for CHST11-PTPRR |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for CHST11-PTPRR |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr12:104995769/chr12:71158558) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CHST11 | chr12:104995769 | chr12:71158558 | ENST00000303694 | + | 2 | 3 | 1_16 | 68 | 353.0 | Topological domain | Cytoplasmic |
Hgene | CHST11 | chr12:104995769 | chr12:71158558 | ENST00000549260 | + | 2 | 3 | 1_16 | 63 | 348.0 | Topological domain | Cytoplasmic |
Hgene | CHST11 | chr12:104995769 | chr12:71158558 | ENST00000303694 | + | 2 | 3 | 17_37 | 68 | 353.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Hgene | CHST11 | chr12:104995769 | chr12:71158558 | ENST00000549260 | + | 2 | 3 | 17_37 | 63 | 348.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000283228 | 1 | 14 | 393_647 | 119 | 658.0 | Domain | Tyrosine-protein phosphatase | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000342084 | 0 | 13 | 393_647 | 7 | 546.0 | Domain | Tyrosine-protein phosphatase | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000378778 | 0 | 11 | 393_647 | 0 | 452.0 | Domain | Tyrosine-protein phosphatase | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000440835 | 0 | 10 | 393_647 | 0 | 413.0 | Domain | Tyrosine-protein phosphatase | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000549308 | 0 | 11 | 393_647 | 0 | 413.0 | Domain | Tyrosine-protein phosphatase | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000283228 | 1 | 14 | 588_594 | 119 | 658.0 | Region | Substrate binding | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000342084 | 0 | 13 | 588_594 | 7 | 546.0 | Region | Substrate binding | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000378778 | 0 | 11 | 588_594 | 0 | 452.0 | Region | Substrate binding | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000440835 | 0 | 10 | 588_594 | 0 | 413.0 | Region | Substrate binding | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000549308 | 0 | 11 | 588_594 | 0 | 413.0 | Region | Substrate binding | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000283228 | 1 | 14 | 249_657 | 119 | 658.0 | Topological domain | Cytoplasmic | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000342084 | 0 | 13 | 22_227 | 7 | 546.0 | Topological domain | Extracellular | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000342084 | 0 | 13 | 249_657 | 7 | 546.0 | Topological domain | Cytoplasmic | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000378778 | 0 | 11 | 22_227 | 0 | 452.0 | Topological domain | Extracellular | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000378778 | 0 | 11 | 249_657 | 0 | 452.0 | Topological domain | Cytoplasmic | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000440835 | 0 | 10 | 22_227 | 0 | 413.0 | Topological domain | Extracellular | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000440835 | 0 | 10 | 249_657 | 0 | 413.0 | Topological domain | Cytoplasmic | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000549308 | 0 | 11 | 22_227 | 0 | 413.0 | Topological domain | Extracellular | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000549308 | 0 | 11 | 249_657 | 0 | 413.0 | Topological domain | Cytoplasmic | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000283228 | 1 | 14 | 228_248 | 119 | 658.0 | Transmembrane | Helical | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000342084 | 0 | 13 | 228_248 | 7 | 546.0 | Transmembrane | Helical | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000378778 | 0 | 11 | 228_248 | 0 | 452.0 | Transmembrane | Helical | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000440835 | 0 | 10 | 228_248 | 0 | 413.0 | Transmembrane | Helical | |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000549308 | 0 | 11 | 228_248 | 0 | 413.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CHST11 | chr12:104995769 | chr12:71158558 | ENST00000303694 | + | 2 | 3 | 124_130 | 68 | 353.0 | Nucleotide binding | PAPS |
Hgene | CHST11 | chr12:104995769 | chr12:71158558 | ENST00000303694 | + | 2 | 3 | 186_194 | 68 | 353.0 | Nucleotide binding | PAPS |
Hgene | CHST11 | chr12:104995769 | chr12:71158558 | ENST00000549260 | + | 2 | 3 | 124_130 | 63 | 348.0 | Nucleotide binding | PAPS |
Hgene | CHST11 | chr12:104995769 | chr12:71158558 | ENST00000549260 | + | 2 | 3 | 186_194 | 63 | 348.0 | Nucleotide binding | PAPS |
Hgene | CHST11 | chr12:104995769 | chr12:71158558 | ENST00000303694 | + | 2 | 3 | 38_352 | 68 | 353.0 | Topological domain | Lumenal |
Hgene | CHST11 | chr12:104995769 | chr12:71158558 | ENST00000549260 | + | 2 | 3 | 38_352 | 63 | 348.0 | Topological domain | Lumenal |
Tgene | PTPRR | chr12:104995769 | chr12:71158558 | ENST00000283228 | 1 | 14 | 22_227 | 119 | 658.0 | Topological domain | Extracellular |
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Fusion Gene Sequence for CHST11-PTPRR |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>16689_16689_1_CHST11-PTPRR_CHST11_chr12_104995769_ENST00000303694_PTPRR_chr12_71158558_ENST00000283228_length(transcript)=3362nt_BP=643nt ATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGCAGCGG CGGCGGCACCACCATCACCGCTCGCACCCCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCGGCGGA GCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACCCCTGC CCGGGCTGGGGGCTCCGAGAGCGGCCGCGAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGGCTCCG GTCCGCGCGGCGGGGTCCCTGCTCCTGCGCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAGCCAGC GCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTATTTCCA AAGTATGTTGCACCCAGTCATGCGGAGGAATCCCTTTGGTGTGGACATCTGCTGCCGGAAGGGGTCCCGAAGCCCCCTGCAGGAACTCTA CAACCCAATCCAGACACTGCAAATGGATGTAAACAAGCTGAACATAACCTTGCTTCGGATCTTCCGCCAAGGAGTGGCTGCAGCTTTAGG ACTCTTACCCCAGCAAGTGCACATCAATCGCCTCATTGGAAAGAAGAACAGTATTGAACTGTTTGTGTCTCCCATAAACCGAAAAACAGG AATTTCTGATGCTCTGCCCTCTGAGGAAGTTCTTCGTTCACTTAATATCAATGTTTTGCATCAAAGTTTATCCCAGTTTGGAATTACAGA AGTCTCTCCTGAGAAAAATGTTTTACAAGGGCAGCATGAAGCGGACAAAATCTGGAGCAAAGAAGGATTTTATGCTGTTGTCATTTTTCT CAGCATCTTTGTTATTATAGTAACGTGTTTGATGATTCTTTACAGATTAAAAGAAAGATTTCAGCTTTCCTTAAGACAAGACAAAGAGAA AAACCAGGAGATCCACCTATCGCCCATCACATTACAGCCAGCACTGTCCGAGGCAAAGACAGTCCACAGCATGGTCCAACCTGAGCAGGC CCCAAAGGTACTGAATGTTGTCGTGGACCCTCAAGGCCGAGGTGCTCCTGAGATCAAAGCTACCACCGCTACCTCTGTTTGCCCTTCTCC TTTCAAAATGAAGCCCATAGGACTTCAAGAGAGAAGAGGGTCCAACGTATCTCTTACATTGGACATGAGTAGCTTGGGGAACATTGAACC CTTTGTGTCTATACCAACACCACGGGAGAAGGTAGCAATGGAGTATCTGCAGTCAGCCAGCCGAATTCTCACAAGGTCTCAGCTGAGGGA CGTCGTGGCAAGTTCACATTTACTCCAAAGTGAATTCATGGAAATACCAATGAACTTTGTGGATCCCAAAGAAATTGATATTCCGCGTCA TGGAACTAAAAATCGCTATAAGACCATTTTACCAAATCCCCTCAGCAGAGTGTGTTTAAGACCAAAAAATGTAACCGATTCATTGAGCAC CTACATTAATGCTAATTATATTAGGGGCTACAGTGGCAAGGAGAAAGCCTTCATTGCCACGCAGGGCCCCATGATCAACACCGTGGATGA TTTCTGGCAGATGGTTTGGCAGGAAGACAGCCCTGTGATTGTTATGATCACAAAACTCAAAGAAAAAAATGAGAAATGTGTGCTATACTG GCCGGAAAAGAGAGGGATATATGGAAAAGTTGAGGTTCTGGTTATCAGTGTAAATGAATGTGATAACTACACCATTCGAAACCTTGTCTT AAAGCAAGGAAGCCACACCCAACATGTGAAGCATTACTGGTACACCTCATGGCCTGATCACAAGACTCCAGACAGTGCCCAGCCCCTCCT ACAGCTCATGCTGGATGTAGAAGAAGACAGACTTGCTTCCCAGGGCCGAGGGCCTGTGGTTGTCCACTGCAGTGCAGGAATAGGTAGAAC AGGGTGTTTTATTGCTACATCCATTGGCTGTCAACAGCTGAAAGAAGAAGGAGTTGTGGATGCACTAAGCATTGTCTGCCAGCTTCGTAT GGATAGAGGTGGAATGGTGCAAACCAGTGAGCAGTATGAATTTGTGCACCATGCTCTGTGCCTGTATGAGAGCAGACTTTCAGCAGAGAC TGTCCAGTGAGTCATTGAAGACTTGTCAGACCATCAATCTCTTGGGGTGATTAATCAAATTACCCACCCAAGGCTTCTAGAAGGAGCTTC CTGCAATGGAAGGAAGGAGAAGCTCTGAAGCCCATGTATGGCATGGATTGTGGAAGACTGGGCAACATATTTAAGATTTCCAGCTCCTTG TGTATATGAATGCATTTGTAAGCATCCCCCAAATTATTCTGAAGGTTTTTTGATGATGGAGGTATGATAGGTTTATCACACAGCCTAAGG CAGATTTTGTTTTGTCTGTACTGACTCTATCTGCCACACAGAATGTATGTATGTAATATTCAGTAATAAATGTCATCAGGTGATGACTGG ATGAGCTGCTGAAGACATTCGTATTATGTGTTAGATGCTTTAATGTTTGCAAAATCTGTCTTGTGAATGGACTGTCAGCTGTTAAACTGT TCCTGTTTTGAAGTGCTATTACCTTTCTCAGTTACCAGAATCTTGCTGCTAAAGTTGCAAGTGATTGATAATGGATTTTTAACAGAGAAG TCTTTGTTTTTGAAAAACAAAAATCAAAAACAGTAACTATTTTATATGGAAATGTGTCTTGATAATATTACCTATTAAATGTGTATTTAT AGTCCCTCCTATCAAACAATTACAGAGCACAATGATTGTCATTGGGTATATATGTATTTACTCTCTATTATTGGGCATAAAGGTGGCTTC TGCTCCAGAACTCTATCCACTGTATTTCCACATCGTGAGTCATTTTACTTTAAAAGGGAAAAACAAATTTGTAGCAACTCTGAAGTATCA AGAGTTTTAACTACTTGTCTCTCTTTTGCTAAGAAGGGATTTTTGAATATGCTATCTACCTGGAATCTCTCTCTCAACAAAAGGTATATG CCTTCAGGAATGATATAATCTGTCCCATTTTCGAGGCTCCTTATAAGGACATTTCCATGTATGTCCTTACATTTCTGAAAGCTTTCAATC TTCAAGAGACAAAAAAAATTAAAATAACTACCCTCAGCAAACACTAGCTGTTCTGCTCATATATGAATTTTTAATGCAGCAATGTTGACT >16689_16689_1_CHST11-PTPRR_CHST11_chr12_104995769_ENST00000303694_PTPRR_chr12_71158558_ENST00000283228_length(amino acids)=749AA_BP=211 MERNEVAFGEKGEGPSDSHSGQRSGSGGGTTITARTPAARPATRQRRPPAGSEEAAERRGGGAGARSQRVHASQHFQTNSGTFHTPARAG GSESGREATPILPLSLAQLCPAPPGLRSARRGPCSCAPGALPGHPGPRSQDKAMKPALLEVMRMNRICRMVLATCLGSFILVIFYFQSML HPVMRRNPFGVDICCRKGSRSPLQELYNPIQTLQMDVNKLNITLLRIFRQGVAAALGLLPQQVHINRLIGKKNSIELFVSPINRKTGISD ALPSEEVLRSLNINVLHQSLSQFGITEVSPEKNVLQGQHEADKIWSKEGFYAVVIFLSIFVIIVTCLMILYRLKERFQLSLRQDKEKNQE IHLSPITLQPALSEAKTVHSMVQPEQAPKVLNVVVDPQGRGAPEIKATTATSVCPSPFKMKPIGLQERRGSNVSLTLDMSSLGNIEPFVS IPTPREKVAMEYLQSASRILTRSQLRDVVASSHLLQSEFMEIPMNFVDPKEIDIPRHGTKNRYKTILPNPLSRVCLRPKNVTDSLSTYIN ANYIRGYSGKEKAFIATQGPMINTVDDFWQMVWQEDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVISVNECDNYTIRNLVLKQG SHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRG -------------------------------------------------------------- >16689_16689_2_CHST11-PTPRR_CHST11_chr12_104995769_ENST00000546689_PTPRR_chr12_71158558_ENST00000283228_length(transcript)=3389nt_BP=670nt GCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGCAGCGGCGGCGGCACCACCATCACCGCTCGCACC CCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCGGCGGAGCGGCGAGGAGGAGGAGCAGGAGCGCGC AGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACCCCTGCCCGGGCTGGGGGCTCCGAGAGCGGCCGC GAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGGCTCCGGTCCGCGCGGCGGGGTCCCTGCTCCTGC GCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAGCCAGCGCTGCTGGAAGTGATGAGGATGAACAGA ATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTATTTCCAAAGTAAGCTTCAAGCACTCTGTCAGCAT GTGAATTTTTTTTTTTTGTAGGTATGGATACTAAAAACTCTAAAATTGTGGTCTTTGGGGGATTTAAAACTTCCTTTCACAGCCTGGCAT TTTACCTTCAGTGGTTGCTTTCTCCGTCACCCTTTTTCTAACACTGCAAATGGATGTAAACAAGCTGAACATAACCTTGCTTCGGATCTT CCGCCAAGGAGTGGCTGCAGCTTTAGGACTCTTACCCCAGCAAGTGCACATCAATCGCCTCATTGGAAAGAAGAACAGTATTGAACTGTT TGTGTCTCCCATAAACCGAAAAACAGGAATTTCTGATGCTCTGCCCTCTGAGGAAGTTCTTCGTTCACTTAATATCAATGTTTTGCATCA AAGTTTATCCCAGTTTGGAATTACAGAAGTCTCTCCTGAGAAAAATGTTTTACAAGGGCAGCATGAAGCGGACAAAATCTGGAGCAAAGA AGGATTTTATGCTGTTGTCATTTTTCTCAGCATCTTTGTTATTATAGTAACGTGTTTGATGATTCTTTACAGATTAAAAGAAAGATTTCA GCTTTCCTTAAGACAAGACAAAGAGAAAAACCAGGAGATCCACCTATCGCCCATCACATTACAGCCAGCACTGTCCGAGGCAAAGACAGT CCACAGCATGGTCCAACCTGAGCAGGCCCCAAAGGTACTGAATGTTGTCGTGGACCCTCAAGGCCGAGGTGCTCCTGAGATCAAAGCTAC CACCGCTACCTCTGTTTGCCCTTCTCCTTTCAAAATGAAGCCCATAGGACTTCAAGAGAGAAGAGGGTCCAACGTATCTCTTACATTGGA CATGAGTAGCTTGGGGAACATTGAACCCTTTGTGTCTATACCAACACCACGGGAGAAGGTAGCAATGGAGTATCTGCAGTCAGCCAGCCG AATTCTCACAAGGTCTCAGCTGAGGGACGTCGTGGCAAGTTCACATTTACTCCAAAGTGAATTCATGGAAATACCAATGAACTTTGTGGA TCCCAAAGAAATTGATATTCCGCGTCATGGAACTAAAAATCGCTATAAGACCATTTTACCAAATCCCCTCAGCAGAGTGTGTTTAAGACC AAAAAATGTAACCGATTCATTGAGCACCTACATTAATGCTAATTATATTAGGGGCTACAGTGGCAAGGAGAAAGCCTTCATTGCCACGCA GGGCCCCATGATCAACACCGTGGATGATTTCTGGCAGATGGTTTGGCAGGAAGACAGCCCTGTGATTGTTATGATCACAAAACTCAAAGA AAAAAATGAGAAATGTGTGCTATACTGGCCGGAAAAGAGAGGGATATATGGAAAAGTTGAGGTTCTGGTTATCAGTGTAAATGAATGTGA TAACTACACCATTCGAAACCTTGTCTTAAAGCAAGGAAGCCACACCCAACATGTGAAGCATTACTGGTACACCTCATGGCCTGATCACAA GACTCCAGACAGTGCCCAGCCCCTCCTACAGCTCATGCTGGATGTAGAAGAAGACAGACTTGCTTCCCAGGGCCGAGGGCCTGTGGTTGT CCACTGCAGTGCAGGAATAGGTAGAACAGGGTGTTTTATTGCTACATCCATTGGCTGTCAACAGCTGAAAGAAGAAGGAGTTGTGGATGC ACTAAGCATTGTCTGCCAGCTTCGTATGGATAGAGGTGGAATGGTGCAAACCAGTGAGCAGTATGAATTTGTGCACCATGCTCTGTGCCT GTATGAGAGCAGACTTTCAGCAGAGACTGTCCAGTGAGTCATTGAAGACTTGTCAGACCATCAATCTCTTGGGGTGATTAATCAAATTAC CCACCCAAGGCTTCTAGAAGGAGCTTCCTGCAATGGAAGGAAGGAGAAGCTCTGAAGCCCATGTATGGCATGGATTGTGGAAGACTGGGC AACATATTTAAGATTTCCAGCTCCTTGTGTATATGAATGCATTTGTAAGCATCCCCCAAATTATTCTGAAGGTTTTTTGATGATGGAGGT ATGATAGGTTTATCACACAGCCTAAGGCAGATTTTGTTTTGTCTGTACTGACTCTATCTGCCACACAGAATGTATGTATGTAATATTCAG TAATAAATGTCATCAGGTGATGACTGGATGAGCTGCTGAAGACATTCGTATTATGTGTTAGATGCTTTAATGTTTGCAAAATCTGTCTTG TGAATGGACTGTCAGCTGTTAAACTGTTCCTGTTTTGAAGTGCTATTACCTTTCTCAGTTACCAGAATCTTGCTGCTAAAGTTGCAAGTG ATTGATAATGGATTTTTAACAGAGAAGTCTTTGTTTTTGAAAAACAAAAATCAAAAACAGTAACTATTTTATATGGAAATGTGTCTTGAT AATATTACCTATTAAATGTGTATTTATAGTCCCTCCTATCAAACAATTACAGAGCACAATGATTGTCATTGGGTATATATGTATTTACTC TCTATTATTGGGCATAAAGGTGGCTTCTGCTCCAGAACTCTATCCACTGTATTTCCACATCGTGAGTCATTTTACTTTAAAAGGGAAAAA CAAATTTGTAGCAACTCTGAAGTATCAAGAGTTTTAACTACTTGTCTCTCTTTTGCTAAGAAGGGATTTTTGAATATGCTATCTACCTGG AATCTCTCTCTCAACAAAAGGTATATGCCTTCAGGAATGATATAATCTGTCCCATTTTCGAGGCTCCTTATAAGGACATTTCCATGTATG TCCTTACATTTCTGAAAGCTTTCAATCTTCAAGAGACAAAAAAAATTAAAATAACTACCCTCAGCAAACACTAGCTGTTCTGCTCATATA >16689_16689_2_CHST11-PTPRR_CHST11_chr12_104995769_ENST00000546689_PTPRR_chr12_71158558_ENST00000283228_length(amino acids)=537AA_BP=1 MQMDVNKLNITLLRIFRQGVAAALGLLPQQVHINRLIGKKNSIELFVSPINRKTGISDALPSEEVLRSLNINVLHQSLSQFGITEVSPEK NVLQGQHEADKIWSKEGFYAVVIFLSIFVIIVTCLMILYRLKERFQLSLRQDKEKNQEIHLSPITLQPALSEAKTVHSMVQPEQAPKVLN VVVDPQGRGAPEIKATTATSVCPSPFKMKPIGLQERRGSNVSLTLDMSSLGNIEPFVSIPTPREKVAMEYLQSASRILTRSQLRDVVASS HLLQSEFMEIPMNFVDPKEIDIPRHGTKNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGYSGKEKAFIATQGPMINTVDDFWQMV WQEDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVISVNECDNYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLD -------------------------------------------------------------- >16689_16689_3_CHST11-PTPRR_CHST11_chr12_104995769_ENST00000547956_PTPRR_chr12_71158558_ENST00000283228_length(transcript)=3569nt_BP=850nt GGAATATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGC AGCGGCGGCGGCACCACCATCACCGCTCGCACCCCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCG GCGGAGCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACC CCTGCCCGGGCTGGGGGCTCCGAGAGCGGCCGCGAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGG CTCCGGTCCGCGCGGCGGGGTCCCTGCTCCTGCGCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAG CCAGCGCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTAT TTCCAAAGTATGTTGCACCCAGGTAAGCTTCAAGCACTCTGTCAGCATGTGAATTTTTTTTTTTTGTAGGTATGGATACTAAAAACTCTA AAATTGTGGTCTTTGGGGGATTTAAAACTTCCTTTCACAGCCTGGCATTTTACCTTCAGTGGTTGCTTTCTCCGTCACCCTTTTTCTATG TAGCATCTCTGAAAAATCTAGCAGGGGATGTTTAGAATTAGAGAAATGCCTAGGTTTAGTGCTAAGCATTCAGACCTGCCCAGGGTTTGA ACTCCTGAGATTAACAGTCTCAAGTTCGAGCAATGGGACTACACTGCAAATGGATGTAAACAAGCTGAACATAACCTTGCTTCGGATCTT CCGCCAAGGAGTGGCTGCAGCTTTAGGACTCTTACCCCAGCAAGTGCACATCAATCGCCTCATTGGAAAGAAGAACAGTATTGAACTGTT TGTGTCTCCCATAAACCGAAAAACAGGAATTTCTGATGCTCTGCCCTCTGAGGAAGTTCTTCGTTCACTTAATATCAATGTTTTGCATCA AAGTTTATCCCAGTTTGGAATTACAGAAGTCTCTCCTGAGAAAAATGTTTTACAAGGGCAGCATGAAGCGGACAAAATCTGGAGCAAAGA AGGATTTTATGCTGTTGTCATTTTTCTCAGCATCTTTGTTATTATAGTAACGTGTTTGATGATTCTTTACAGATTAAAAGAAAGATTTCA GCTTTCCTTAAGACAAGACAAAGAGAAAAACCAGGAGATCCACCTATCGCCCATCACATTACAGCCAGCACTGTCCGAGGCAAAGACAGT CCACAGCATGGTCCAACCTGAGCAGGCCCCAAAGGTACTGAATGTTGTCGTGGACCCTCAAGGCCGAGGTGCTCCTGAGATCAAAGCTAC CACCGCTACCTCTGTTTGCCCTTCTCCTTTCAAAATGAAGCCCATAGGACTTCAAGAGAGAAGAGGGTCCAACGTATCTCTTACATTGGA CATGAGTAGCTTGGGGAACATTGAACCCTTTGTGTCTATACCAACACCACGGGAGAAGGTAGCAATGGAGTATCTGCAGTCAGCCAGCCG AATTCTCACAAGGTCTCAGCTGAGGGACGTCGTGGCAAGTTCACATTTACTCCAAAGTGAATTCATGGAAATACCAATGAACTTTGTGGA TCCCAAAGAAATTGATATTCCGCGTCATGGAACTAAAAATCGCTATAAGACCATTTTACCAAATCCCCTCAGCAGAGTGTGTTTAAGACC AAAAAATGTAACCGATTCATTGAGCACCTACATTAATGCTAATTATATTAGGGGCTACAGTGGCAAGGAGAAAGCCTTCATTGCCACGCA GGGCCCCATGATCAACACCGTGGATGATTTCTGGCAGATGGTTTGGCAGGAAGACAGCCCTGTGATTGTTATGATCACAAAACTCAAAGA AAAAAATGAGAAATGTGTGCTATACTGGCCGGAAAAGAGAGGGATATATGGAAAAGTTGAGGTTCTGGTTATCAGTGTAAATGAATGTGA TAACTACACCATTCGAAACCTTGTCTTAAAGCAAGGAAGCCACACCCAACATGTGAAGCATTACTGGTACACCTCATGGCCTGATCACAA GACTCCAGACAGTGCCCAGCCCCTCCTACAGCTCATGCTGGATGTAGAAGAAGACAGACTTGCTTCCCAGGGCCGAGGGCCTGTGGTTGT CCACTGCAGTGCAGGAATAGGTAGAACAGGGTGTTTTATTGCTACATCCATTGGCTGTCAACAGCTGAAAGAAGAAGGAGTTGTGGATGC ACTAAGCATTGTCTGCCAGCTTCGTATGGATAGAGGTGGAATGGTGCAAACCAGTGAGCAGTATGAATTTGTGCACCATGCTCTGTGCCT GTATGAGAGCAGACTTTCAGCAGAGACTGTCCAGTGAGTCATTGAAGACTTGTCAGACCATCAATCTCTTGGGGTGATTAATCAAATTAC CCACCCAAGGCTTCTAGAAGGAGCTTCCTGCAATGGAAGGAAGGAGAAGCTCTGAAGCCCATGTATGGCATGGATTGTGGAAGACTGGGC AACATATTTAAGATTTCCAGCTCCTTGTGTATATGAATGCATTTGTAAGCATCCCCCAAATTATTCTGAAGGTTTTTTGATGATGGAGGT ATGATAGGTTTATCACACAGCCTAAGGCAGATTTTGTTTTGTCTGTACTGACTCTATCTGCCACACAGAATGTATGTATGTAATATTCAG TAATAAATGTCATCAGGTGATGACTGGATGAGCTGCTGAAGACATTCGTATTATGTGTTAGATGCTTTAATGTTTGCAAAATCTGTCTTG TGAATGGACTGTCAGCTGTTAAACTGTTCCTGTTTTGAAGTGCTATTACCTTTCTCAGTTACCAGAATCTTGCTGCTAAAGTTGCAAGTG ATTGATAATGGATTTTTAACAGAGAAGTCTTTGTTTTTGAAAAACAAAAATCAAAAACAGTAACTATTTTATATGGAAATGTGTCTTGAT AATATTACCTATTAAATGTGTATTTATAGTCCCTCCTATCAAACAATTACAGAGCACAATGATTGTCATTGGGTATATATGTATTTACTC TCTATTATTGGGCATAAAGGTGGCTTCTGCTCCAGAACTCTATCCACTGTATTTCCACATCGTGAGTCATTTTACTTTAAAAGGGAAAAA CAAATTTGTAGCAACTCTGAAGTATCAAGAGTTTTAACTACTTGTCTCTCTTTTGCTAAGAAGGGATTTTTGAATATGCTATCTACCTGG AATCTCTCTCTCAACAAAAGGTATATGCCTTCAGGAATGATATAATCTGTCCCATTTTCGAGGCTCCTTATAAGGACATTTCCATGTATG TCCTTACATTTCTGAAAGCTTTCAATCTTCAAGAGACAAAAAAAATTAAAATAACTACCCTCAGCAAACACTAGCTGTTCTGCTCATATA >16689_16689_3_CHST11-PTPRR_CHST11_chr12_104995769_ENST00000547956_PTPRR_chr12_71158558_ENST00000283228_length(amino acids)=550AA_BP=12 MRLTVSSSSNGTTLQMDVNKLNITLLRIFRQGVAAALGLLPQQVHINRLIGKKNSIELFVSPINRKTGISDALPSEEVLRSLNINVLHQS LSQFGITEVSPEKNVLQGQHEADKIWSKEGFYAVVIFLSIFVIIVTCLMILYRLKERFQLSLRQDKEKNQEIHLSPITLQPALSEAKTVH SMVQPEQAPKVLNVVVDPQGRGAPEIKATTATSVCPSPFKMKPIGLQERRGSNVSLTLDMSSLGNIEPFVSIPTPREKVAMEYLQSASRI LTRSQLRDVVASSHLLQSEFMEIPMNFVDPKEIDIPRHGTKNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGYSGKEKAFIATQG PMINTVDDFWQMVWQEDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVISVNECDNYTIRNLVLKQGSHTQHVKHYWYTSWPDHKT PDSAQPLLQLMLDVEEDRLASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSEQYEFVHHALCLY -------------------------------------------------------------- >16689_16689_4_CHST11-PTPRR_CHST11_chr12_104995769_ENST00000549260_PTPRR_chr12_71158558_ENST00000283228_length(transcript)=3349nt_BP=630nt ATATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGCAGC GGCGGCGGCACCACCATCACCGCTCGCACCCCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCGGCG GAGCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACCCCT GCCCGGGCTGGGGGCTCCGAGAGCGGCCGCGAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGGCTC CGGTCCGCGCGGCGGGGTCCCTGCTCCTGCGCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAGCCA GCGCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTATTTC CAAATCATGCGGAGGAATCCCTTTGGTGTGGACATCTGCTGCCGGAAGGGGTCCCGAAGCCCCCTGCAGGAACTCTACAACCCAATCCAG ACACTGCAAATGGATGTAAACAAGCTGAACATAACCTTGCTTCGGATCTTCCGCCAAGGAGTGGCTGCAGCTTTAGGACTCTTACCCCAG CAAGTGCACATCAATCGCCTCATTGGAAAGAAGAACAGTATTGAACTGTTTGTGTCTCCCATAAACCGAAAAACAGGAATTTCTGATGCT CTGCCCTCTGAGGAAGTTCTTCGTTCACTTAATATCAATGTTTTGCATCAAAGTTTATCCCAGTTTGGAATTACAGAAGTCTCTCCTGAG AAAAATGTTTTACAAGGGCAGCATGAAGCGGACAAAATCTGGAGCAAAGAAGGATTTTATGCTGTTGTCATTTTTCTCAGCATCTTTGTT ATTATAGTAACGTGTTTGATGATTCTTTACAGATTAAAAGAAAGATTTCAGCTTTCCTTAAGACAAGACAAAGAGAAAAACCAGGAGATC CACCTATCGCCCATCACATTACAGCCAGCACTGTCCGAGGCAAAGACAGTCCACAGCATGGTCCAACCTGAGCAGGCCCCAAAGGTACTG AATGTTGTCGTGGACCCTCAAGGCCGAGGTGCTCCTGAGATCAAAGCTACCACCGCTACCTCTGTTTGCCCTTCTCCTTTCAAAATGAAG CCCATAGGACTTCAAGAGAGAAGAGGGTCCAACGTATCTCTTACATTGGACATGAGTAGCTTGGGGAACATTGAACCCTTTGTGTCTATA CCAACACCACGGGAGAAGGTAGCAATGGAGTATCTGCAGTCAGCCAGCCGAATTCTCACAAGGTCTCAGCTGAGGGACGTCGTGGCAAGT TCACATTTACTCCAAAGTGAATTCATGGAAATACCAATGAACTTTGTGGATCCCAAAGAAATTGATATTCCGCGTCATGGAACTAAAAAT CGCTATAAGACCATTTTACCAAATCCCCTCAGCAGAGTGTGTTTAAGACCAAAAAATGTAACCGATTCATTGAGCACCTACATTAATGCT AATTATATTAGGGGCTACAGTGGCAAGGAGAAAGCCTTCATTGCCACGCAGGGCCCCATGATCAACACCGTGGATGATTTCTGGCAGATG GTTTGGCAGGAAGACAGCCCTGTGATTGTTATGATCACAAAACTCAAAGAAAAAAATGAGAAATGTGTGCTATACTGGCCGGAAAAGAGA GGGATATATGGAAAAGTTGAGGTTCTGGTTATCAGTGTAAATGAATGTGATAACTACACCATTCGAAACCTTGTCTTAAAGCAAGGAAGC CACACCCAACATGTGAAGCATTACTGGTACACCTCATGGCCTGATCACAAGACTCCAGACAGTGCCCAGCCCCTCCTACAGCTCATGCTG GATGTAGAAGAAGACAGACTTGCTTCCCAGGGCCGAGGGCCTGTGGTTGTCCACTGCAGTGCAGGAATAGGTAGAACAGGGTGTTTTATT GCTACATCCATTGGCTGTCAACAGCTGAAAGAAGAAGGAGTTGTGGATGCACTAAGCATTGTCTGCCAGCTTCGTATGGATAGAGGTGGA ATGGTGCAAACCAGTGAGCAGTATGAATTTGTGCACCATGCTCTGTGCCTGTATGAGAGCAGACTTTCAGCAGAGACTGTCCAGTGAGTC ATTGAAGACTTGTCAGACCATCAATCTCTTGGGGTGATTAATCAAATTACCCACCCAAGGCTTCTAGAAGGAGCTTCCTGCAATGGAAGG AAGGAGAAGCTCTGAAGCCCATGTATGGCATGGATTGTGGAAGACTGGGCAACATATTTAAGATTTCCAGCTCCTTGTGTATATGAATGC ATTTGTAAGCATCCCCCAAATTATTCTGAAGGTTTTTTGATGATGGAGGTATGATAGGTTTATCACACAGCCTAAGGCAGATTTTGTTTT GTCTGTACTGACTCTATCTGCCACACAGAATGTATGTATGTAATATTCAGTAATAAATGTCATCAGGTGATGACTGGATGAGCTGCTGAA GACATTCGTATTATGTGTTAGATGCTTTAATGTTTGCAAAATCTGTCTTGTGAATGGACTGTCAGCTGTTAAACTGTTCCTGTTTTGAAG TGCTATTACCTTTCTCAGTTACCAGAATCTTGCTGCTAAAGTTGCAAGTGATTGATAATGGATTTTTAACAGAGAAGTCTTTGTTTTTGA AAAACAAAAATCAAAAACAGTAACTATTTTATATGGAAATGTGTCTTGATAATATTACCTATTAAATGTGTATTTATAGTCCCTCCTATC AAACAATTACAGAGCACAATGATTGTCATTGGGTATATATGTATTTACTCTCTATTATTGGGCATAAAGGTGGCTTCTGCTCCAGAACTC TATCCACTGTATTTCCACATCGTGAGTCATTTTACTTTAAAAGGGAAAAACAAATTTGTAGCAACTCTGAAGTATCAAGAGTTTTAACTA CTTGTCTCTCTTTTGCTAAGAAGGGATTTTTGAATATGCTATCTACCTGGAATCTCTCTCTCAACAAAAGGTATATGCCTTCAGGAATGA TATAATCTGTCCCATTTTCGAGGCTCCTTATAAGGACATTTCCATGTATGTCCTTACATTTCTGAAAGCTTTCAATCTTCAAGAGACAAA AAAAATTAAAATAACTACCCTCAGCAAACACTAGCTGTTCTGCTCATATATGAATTTTTAATGCAGCAATGTTGACTTTGTTTCATACTG >16689_16689_4_CHST11-PTPRR_CHST11_chr12_104995769_ENST00000549260_PTPRR_chr12_71158558_ENST00000283228_length(amino acids)=744AA_BP=206 MERNEVAFGEKGEGPSDSHSGQRSGSGGGTTITARTPAARPATRQRRPPAGSEEAAERRGGGAGARSQRVHASQHFQTNSGTFHTPARAG GSESGREATPILPLSLAQLCPAPPGLRSARRGPCSCAPGALPGHPGPRSQDKAMKPALLEVMRMNRICRMVLATCLGSFILVIFYFQIMR RNPFGVDICCRKGSRSPLQELYNPIQTLQMDVNKLNITLLRIFRQGVAAALGLLPQQVHINRLIGKKNSIELFVSPINRKTGISDALPSE EVLRSLNINVLHQSLSQFGITEVSPEKNVLQGQHEADKIWSKEGFYAVVIFLSIFVIIVTCLMILYRLKERFQLSLRQDKEKNQEIHLSP ITLQPALSEAKTVHSMVQPEQAPKVLNVVVDPQGRGAPEIKATTATSVCPSPFKMKPIGLQERRGSNVSLTLDMSSLGNIEPFVSIPTPR EKVAMEYLQSASRILTRSQLRDVVASSHLLQSEFMEIPMNFVDPKEIDIPRHGTKNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIR GYSGKEKAFIATQGPMINTVDDFWQMVWQEDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVISVNECDNYTIRNLVLKQGSHTQH VKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQT -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for CHST11-PTPRR |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CHST11-PTPRR |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for CHST11-PTPRR |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |