FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
leaf

Fusion Gene Summary

leaf

Fusion Gene ORF analysis

leaf

Fusion Genomic Features

leaf

Fusion Protein Features

leaf

Fusion Gene Sequence

leaf

Fusion Gene PPI analysis

leaf

Related Drugs

leaf

Related Diseases

Fusion gene:CPT1A-GDPD4 (FusionGDB2 ID:19217)

Fusion Gene Summary for CPT1A-GDPD4

check button Fusion gene summary
Fusion gene informationFusion gene name: CPT1A-GDPD4
Fusion gene ID: 19217
HgeneTgene
Gene symbol

CPT1A

GDPD4

Gene ID

1374

220032

Gene namecarnitine palmitoyltransferase 1Aglycerophosphodiester phosphodiesterase domain containing 4
SynonymsCPT1|CPT1-L|L-CPT1GDE6
Cytomap

11q13.3

11q13.5

Type of geneprotein-codingprotein-coding
Descriptioncarnitine O-palmitoyltransferase 1, liver isoformCPT ICPTI-Lcarnitine O-palmitoyltransferase I, liver isoformcarnitine palmitoyltransferase 1A (liver)carnitine palmitoyltransferase I, liverglycerophosphodiester phosphodiesterase domain-containing protein 4GDPD domain containing proteinglycerophosphodiester phosphodiesterase 6ugpQ
Modification date2020031520200313
UniProtAcc

P50416

.
Ensembl transtripts involved in fusion geneENST00000265641, ENST00000376618, 
ENST00000539743, ENST00000540367, 
ENST00000537756, ENST00000538994, 
ENST00000527489, ENST00000315938, 
ENST00000376217, 
Fusion gene scores* DoF score25 X 23 X 12=690010 X 5 X 3=150
# samples 3211
** MAII scorelog2(32/6900*10)=-4.43045255166553
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(11/150*10)=-0.447458976971221
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: CPT1A [Title/Abstract] AND GDPD4 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointCPT1A(68571468)-GDPD4(76998465), # samples:1
CPT1A(68571467)-GDPD4(76998463), # samples:1
Anticipated loss of major functional domain due to fusion event.CPT1A-GDPD4 seems lost the major protein functional domain in Hgene partner, which is a cell metabolism gene due to the frame-shifted ORF.
CPT1A-GDPD4 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneCPT1A

GO:0001676

long-chain fatty acid metabolic process

11350182

HgeneCPT1A

GO:0009437

carnitine metabolic process

11350182


check buttonFusion gene breakpoints across CPT1A (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across GDPD4 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4BRCATCGA-A8-A086-01ACPT1Achr11

68571468

-GDPD4chr11

76998465

-
ChimerDB4BRCATCGA-A8-A086CPT1Achr11

68571467

-GDPD4chr11

76998463

-


Top

Fusion Gene ORF analysis for CPT1A-GDPD4

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-5UTRENST00000265641ENST00000527489CPT1Achr11

68571468

-GDPD4chr11

76998465

-
5CDS-5UTRENST00000265641ENST00000527489CPT1Achr11

68571467

-GDPD4chr11

76998463

-
5CDS-5UTRENST00000376618ENST00000527489CPT1Achr11

68571468

-GDPD4chr11

76998465

-
5CDS-5UTRENST00000376618ENST00000527489CPT1Achr11

68571467

-GDPD4chr11

76998463

-
5CDS-5UTRENST00000539743ENST00000527489CPT1Achr11

68571468

-GDPD4chr11

76998465

-
5CDS-5UTRENST00000539743ENST00000527489CPT1Achr11

68571467

-GDPD4chr11

76998463

-
5CDS-5UTRENST00000540367ENST00000527489CPT1Achr11

68571468

-GDPD4chr11

76998465

-
5CDS-5UTRENST00000540367ENST00000527489CPT1Achr11

68571467

-GDPD4chr11

76998463

-
Frame-shiftENST00000265641ENST00000315938CPT1Achr11

68571468

-GDPD4chr11

76998465

-
Frame-shiftENST00000265641ENST00000315938CPT1Achr11

68571467

-GDPD4chr11

76998463

-
Frame-shiftENST00000265641ENST00000376217CPT1Achr11

68571468

-GDPD4chr11

76998465

-
Frame-shiftENST00000265641ENST00000376217CPT1Achr11

68571467

-GDPD4chr11

76998463

-
Frame-shiftENST00000376618ENST00000315938CPT1Achr11

68571468

-GDPD4chr11

76998465

-
Frame-shiftENST00000376618ENST00000315938CPT1Achr11

68571467

-GDPD4chr11

76998463

-
Frame-shiftENST00000376618ENST00000376217CPT1Achr11

68571468

-GDPD4chr11

76998465

-
Frame-shiftENST00000376618ENST00000376217CPT1Achr11

68571467

-GDPD4chr11

76998463

-
In-frameENST00000539743ENST00000315938CPT1Achr11

68571468

-GDPD4chr11

76998465

-
In-frameENST00000539743ENST00000315938CPT1Achr11

68571467

-GDPD4chr11

76998463

-
In-frameENST00000539743ENST00000376217CPT1Achr11

68571468

-GDPD4chr11

76998465

-
In-frameENST00000539743ENST00000376217CPT1Achr11

68571467

-GDPD4chr11

76998463

-
In-frameENST00000540367ENST00000315938CPT1Achr11

68571468

-GDPD4chr11

76998465

-
In-frameENST00000540367ENST00000315938CPT1Achr11

68571467

-GDPD4chr11

76998463

-
In-frameENST00000540367ENST00000376217CPT1Achr11

68571468

-GDPD4chr11

76998465

-
In-frameENST00000540367ENST00000376217CPT1Achr11

68571467

-GDPD4chr11

76998463

-
intron-3CDSENST00000537756ENST00000315938CPT1Achr11

68571468

-GDPD4chr11

76998465

-
intron-3CDSENST00000537756ENST00000315938CPT1Achr11

68571467

-GDPD4chr11

76998463

-
intron-3CDSENST00000537756ENST00000376217CPT1Achr11

68571468

-GDPD4chr11

76998465

-
intron-3CDSENST00000537756ENST00000376217CPT1Achr11

68571467

-GDPD4chr11

76998463

-
intron-3CDSENST00000538994ENST00000315938CPT1Achr11

68571468

-GDPD4chr11

76998465

-
intron-3CDSENST00000538994ENST00000315938CPT1Achr11

68571467

-GDPD4chr11

76998463

-
intron-3CDSENST00000538994ENST00000376217CPT1Achr11

68571468

-GDPD4chr11

76998465

-
intron-3CDSENST00000538994ENST00000376217CPT1Achr11

68571467

-GDPD4chr11

76998463

-
intron-5UTRENST00000537756ENST00000527489CPT1Achr11

68571468

-GDPD4chr11

76998465

-
intron-5UTRENST00000537756ENST00000527489CPT1Achr11

68571467

-GDPD4chr11

76998463

-
intron-5UTRENST00000538994ENST00000527489CPT1Achr11

68571468

-GDPD4chr11

76998465

-
intron-5UTRENST00000538994ENST00000527489CPT1Achr11

68571467

-GDPD4chr11

76998463

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000540367CPT1Achr1168571468-ENST00000376217GDPD4chr1176998465-30865847692706645
ENST00000540367CPT1Achr1168571468-ENST00000315938GDPD4chr1176998465-31175847692397542
ENST00000539743CPT1Achr1168571468-ENST00000376217GDPD4chr1176998465-30865847692706645
ENST00000539743CPT1Achr1168571468-ENST00000315938GDPD4chr1176998465-31175847692397542
ENST00000540367CPT1Achr1168571467-ENST00000376217GDPD4chr1176998463-30865847692706645
ENST00000540367CPT1Achr1168571467-ENST00000315938GDPD4chr1176998463-31175847692397542
ENST00000539743CPT1Achr1168571467-ENST00000376217GDPD4chr1176998463-30865847692706645
ENST00000539743CPT1Achr1168571467-ENST00000315938GDPD4chr1176998463-31175847692397542

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000540367ENST00000376217CPT1Achr1168571468-GDPD4chr1176998465-0.0049138930.99508613
ENST00000540367ENST00000315938CPT1Achr1168571468-GDPD4chr1176998465-0.0077964410.9922036
ENST00000539743ENST00000376217CPT1Achr1168571468-GDPD4chr1176998465-0.0049138930.99508613
ENST00000539743ENST00000315938CPT1Achr1168571468-GDPD4chr1176998465-0.0077964410.9922036
ENST00000540367ENST00000376217CPT1Achr1168571467-GDPD4chr1176998463-0.0049138930.99508613
ENST00000540367ENST00000315938CPT1Achr1168571467-GDPD4chr1176998463-0.0077964410.9922036
ENST00000539743ENST00000376217CPT1Achr1168571467-GDPD4chr1176998463-0.0049138930.99508613
ENST00000539743ENST00000315938CPT1Achr1168571467-GDPD4chr1176998463-0.0077964410.9922036

Top

Fusion Genomic Features for CPT1A-GDPD4


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

Top

Fusion Protein Features for CPT1A-GDPD4


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr11:68571468/chr11:76998465)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
CPT1A

P50416

.
FUNCTION: Catalyzes the transfer of the acyl group of long-chain fatty acid-CoA conjugates onto carnitine, an essential step for the mitochondrial uptake of long-chain fatty acids and their subsequent beta-oxidation in the mitochondrion (PubMed:9691089, PubMed:11350182, PubMed:14517221). Plays an important role in hepatic triglyceride metabolism (By similarity). {ECO:0000250|UniProtKB:P32198, ECO:0000269|PubMed:11350182, ECO:0000269|PubMed:14517221, ECO:0000269|PubMed:9691089}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneCPT1Achr11:68571467chr11:76998463ENST00000265641-5192_47185774.0Topological domainCytoplasmic
HgeneCPT1Achr11:68571467chr11:76998463ENST00000265641-51974_102185774.0Topological domainMitochondrial intermembrane
HgeneCPT1Achr11:68571467chr11:76998463ENST00000376618-5192_47185757.0Topological domainCytoplasmic
HgeneCPT1Achr11:68571467chr11:76998463ENST00000376618-51974_102185757.0Topological domainMitochondrial intermembrane
HgeneCPT1Achr11:68571467chr11:76998463ENST00000539743-4182_47185774.0Topological domainCytoplasmic
HgeneCPT1Achr11:68571467chr11:76998463ENST00000539743-41874_102185774.0Topological domainMitochondrial intermembrane
HgeneCPT1Achr11:68571467chr11:76998463ENST00000540367-4182_47185757.0Topological domainCytoplasmic
HgeneCPT1Achr11:68571467chr11:76998463ENST00000540367-41874_102185757.0Topological domainMitochondrial intermembrane
HgeneCPT1Achr11:68571468chr11:76998465ENST00000265641-5192_47185774.0Topological domainCytoplasmic
HgeneCPT1Achr11:68571468chr11:76998465ENST00000265641-51974_102185774.0Topological domainMitochondrial intermembrane
HgeneCPT1Achr11:68571468chr11:76998465ENST00000376618-5192_47185757.0Topological domainCytoplasmic
HgeneCPT1Achr11:68571468chr11:76998465ENST00000376618-51974_102185757.0Topological domainMitochondrial intermembrane
HgeneCPT1Achr11:68571468chr11:76998465ENST00000539743-4182_47185774.0Topological domainCytoplasmic
HgeneCPT1Achr11:68571468chr11:76998465ENST00000539743-41874_102185774.0Topological domainMitochondrial intermembrane
HgeneCPT1Achr11:68571468chr11:76998465ENST00000540367-4182_47185757.0Topological domainCytoplasmic
HgeneCPT1Achr11:68571468chr11:76998465ENST00000540367-41874_102185757.0Topological domainMitochondrial intermembrane
HgeneCPT1Achr11:68571467chr11:76998463ENST00000265641-519103_122185774.0TransmembraneHelical
HgeneCPT1Achr11:68571467chr11:76998463ENST00000265641-51948_73185774.0TransmembraneHelical
HgeneCPT1Achr11:68571467chr11:76998463ENST00000376618-519103_122185757.0TransmembraneHelical
HgeneCPT1Achr11:68571467chr11:76998463ENST00000376618-51948_73185757.0TransmembraneHelical
HgeneCPT1Achr11:68571467chr11:76998463ENST00000539743-418103_122185774.0TransmembraneHelical
HgeneCPT1Achr11:68571467chr11:76998463ENST00000539743-41848_73185774.0TransmembraneHelical
HgeneCPT1Achr11:68571467chr11:76998463ENST00000540367-418103_122185757.0TransmembraneHelical
HgeneCPT1Achr11:68571467chr11:76998463ENST00000540367-41848_73185757.0TransmembraneHelical
HgeneCPT1Achr11:68571468chr11:76998465ENST00000265641-519103_122185774.0TransmembraneHelical
HgeneCPT1Achr11:68571468chr11:76998465ENST00000265641-51948_73185774.0TransmembraneHelical
HgeneCPT1Achr11:68571468chr11:76998465ENST00000376618-519103_122185757.0TransmembraneHelical
HgeneCPT1Achr11:68571468chr11:76998465ENST00000376618-51948_73185757.0TransmembraneHelical
HgeneCPT1Achr11:68571468chr11:76998465ENST00000539743-418103_122185774.0TransmembraneHelical
HgeneCPT1Achr11:68571468chr11:76998465ENST00000539743-41848_73185774.0TransmembraneHelical
HgeneCPT1Achr11:68571468chr11:76998465ENST00000540367-418103_122185757.0TransmembraneHelical
HgeneCPT1Achr11:68571468chr11:76998465ENST00000540367-41848_73185757.0TransmembraneHelical
TgeneGDPD4chr11:68571467chr11:76998463ENST00000315938-116198_4570521.0DomainNote=GP-PDE
TgeneGDPD4chr11:68571467chr11:76998463ENST00000376217-117198_4570624.0DomainNote=GP-PDE
TgeneGDPD4chr11:68571468chr11:76998465ENST00000315938-116198_4570521.0DomainNote=GP-PDE
TgeneGDPD4chr11:68571468chr11:76998465ENST00000376217-117198_4570624.0DomainNote=GP-PDE
TgeneGDPD4chr11:68571467chr11:76998463ENST00000315938-116131_1620521.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571467chr11:76998463ENST00000315938-116184_4680521.0Topological domainExtracellular
TgeneGDPD4chr11:68571467chr11:76998463ENST00000315938-1161_170521.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571467chr11:76998463ENST00000315938-11639_390521.0Topological domainExtracellular
TgeneGDPD4chr11:68571467chr11:76998463ENST00000315938-116490_6230521.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571467chr11:76998463ENST00000315938-11661_690521.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571467chr11:76998463ENST00000315938-11691_1090521.0Topological domainExtracellular
TgeneGDPD4chr11:68571467chr11:76998463ENST00000376217-117131_1620624.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571467chr11:76998463ENST00000376217-117184_4680624.0Topological domainExtracellular
TgeneGDPD4chr11:68571467chr11:76998463ENST00000376217-1171_170624.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571467chr11:76998463ENST00000376217-11739_390624.0Topological domainExtracellular
TgeneGDPD4chr11:68571467chr11:76998463ENST00000376217-117490_6230624.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571467chr11:76998463ENST00000376217-11761_690624.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571467chr11:76998463ENST00000376217-11791_1090624.0Topological domainExtracellular
TgeneGDPD4chr11:68571468chr11:76998465ENST00000315938-116131_1620521.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571468chr11:76998465ENST00000315938-116184_4680521.0Topological domainExtracellular
TgeneGDPD4chr11:68571468chr11:76998465ENST00000315938-1161_170521.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571468chr11:76998465ENST00000315938-11639_390521.0Topological domainExtracellular
TgeneGDPD4chr11:68571468chr11:76998465ENST00000315938-116490_6230521.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571468chr11:76998465ENST00000315938-11661_690521.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571468chr11:76998465ENST00000315938-11691_1090521.0Topological domainExtracellular
TgeneGDPD4chr11:68571468chr11:76998465ENST00000376217-117131_1620624.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571468chr11:76998465ENST00000376217-117184_4680624.0Topological domainExtracellular
TgeneGDPD4chr11:68571468chr11:76998465ENST00000376217-1171_170624.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571468chr11:76998465ENST00000376217-11739_390624.0Topological domainExtracellular
TgeneGDPD4chr11:68571468chr11:76998465ENST00000376217-117490_6230624.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571468chr11:76998465ENST00000376217-11761_690624.0Topological domainCytoplasmic
TgeneGDPD4chr11:68571468chr11:76998465ENST00000376217-11791_1090624.0Topological domainExtracellular
TgeneGDPD4chr11:68571467chr11:76998463ENST00000315938-116110_1300521.0TransmembraneHelical
TgeneGDPD4chr11:68571467chr11:76998463ENST00000315938-116163_1830521.0TransmembraneHelical
TgeneGDPD4chr11:68571467chr11:76998463ENST00000315938-11618_380521.0TransmembraneHelical
TgeneGDPD4chr11:68571467chr11:76998463ENST00000315938-11640_600521.0TransmembraneHelical
TgeneGDPD4chr11:68571467chr11:76998463ENST00000315938-116469_4890521.0TransmembraneHelical
TgeneGDPD4chr11:68571467chr11:76998463ENST00000315938-11670_900521.0TransmembraneHelical
TgeneGDPD4chr11:68571467chr11:76998463ENST00000376217-117110_1300624.0TransmembraneHelical
TgeneGDPD4chr11:68571467chr11:76998463ENST00000376217-117163_1830624.0TransmembraneHelical
TgeneGDPD4chr11:68571467chr11:76998463ENST00000376217-11718_380624.0TransmembraneHelical
TgeneGDPD4chr11:68571467chr11:76998463ENST00000376217-11740_600624.0TransmembraneHelical
TgeneGDPD4chr11:68571467chr11:76998463ENST00000376217-117469_4890624.0TransmembraneHelical
TgeneGDPD4chr11:68571467chr11:76998463ENST00000376217-11770_900624.0TransmembraneHelical
TgeneGDPD4chr11:68571468chr11:76998465ENST00000315938-116110_1300521.0TransmembraneHelical
TgeneGDPD4chr11:68571468chr11:76998465ENST00000315938-116163_1830521.0TransmembraneHelical
TgeneGDPD4chr11:68571468chr11:76998465ENST00000315938-11618_380521.0TransmembraneHelical
TgeneGDPD4chr11:68571468chr11:76998465ENST00000315938-11640_600521.0TransmembraneHelical
TgeneGDPD4chr11:68571468chr11:76998465ENST00000315938-116469_4890521.0TransmembraneHelical
TgeneGDPD4chr11:68571468chr11:76998465ENST00000315938-11670_900521.0TransmembraneHelical
TgeneGDPD4chr11:68571468chr11:76998465ENST00000376217-117110_1300624.0TransmembraneHelical
TgeneGDPD4chr11:68571468chr11:76998465ENST00000376217-117163_1830624.0TransmembraneHelical
TgeneGDPD4chr11:68571468chr11:76998465ENST00000376217-11718_380624.0TransmembraneHelical
TgeneGDPD4chr11:68571468chr11:76998465ENST00000376217-11740_600624.0TransmembraneHelical
TgeneGDPD4chr11:68571468chr11:76998465ENST00000376217-117469_4890624.0TransmembraneHelical
TgeneGDPD4chr11:68571468chr11:76998465ENST00000376217-11770_900624.0TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneCPT1Achr11:68571467chr11:76998463ENST00000265641-519555_567185774.0RegionCoenzyme A binding
HgeneCPT1Achr11:68571467chr11:76998463ENST00000376618-519555_567185757.0RegionCoenzyme A binding
HgeneCPT1Achr11:68571467chr11:76998463ENST00000539743-418555_567185774.0RegionCoenzyme A binding
HgeneCPT1Achr11:68571467chr11:76998463ENST00000540367-418555_567185757.0RegionCoenzyme A binding
HgeneCPT1Achr11:68571468chr11:76998465ENST00000265641-519555_567185774.0RegionCoenzyme A binding
HgeneCPT1Achr11:68571468chr11:76998465ENST00000376618-519555_567185757.0RegionCoenzyme A binding
HgeneCPT1Achr11:68571468chr11:76998465ENST00000539743-418555_567185774.0RegionCoenzyme A binding
HgeneCPT1Achr11:68571468chr11:76998465ENST00000540367-418555_567185757.0RegionCoenzyme A binding
HgeneCPT1Achr11:68571467chr11:76998463ENST00000265641-519123_773185774.0Topological domainCytoplasmic
HgeneCPT1Achr11:68571467chr11:76998463ENST00000376618-519123_773185757.0Topological domainCytoplasmic
HgeneCPT1Achr11:68571467chr11:76998463ENST00000539743-418123_773185774.0Topological domainCytoplasmic
HgeneCPT1Achr11:68571467chr11:76998463ENST00000540367-418123_773185757.0Topological domainCytoplasmic
HgeneCPT1Achr11:68571468chr11:76998465ENST00000265641-519123_773185774.0Topological domainCytoplasmic
HgeneCPT1Achr11:68571468chr11:76998465ENST00000376618-519123_773185757.0Topological domainCytoplasmic
HgeneCPT1Achr11:68571468chr11:76998465ENST00000539743-418123_773185774.0Topological domainCytoplasmic
HgeneCPT1Achr11:68571468chr11:76998465ENST00000540367-418123_773185757.0Topological domainCytoplasmic


Top

Fusion Gene Sequence for CPT1A-GDPD4


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>19217_19217_1_CPT1A-GDPD4_CPT1A_chr11_68571467_ENST00000539743_GDPD4_chr11_76998463_ENST00000315938_length(transcript)=3117nt_BP=584nt
CTCCTTCTCCTTCCAGGTACTCTCTGAAGATGGCAGAAGCTCACCAAGCTGTGGCCTTTCAGTTCACGGTCACTCCGGACGGGATTGACC
TGCGGCTGAGCCATGAAGCTCTTAGACAAATCTATCTCTCTGGACTTCATTCCTGGAAAAAGAAGTTCATCAGATTCAAGAACGGCATCA
TCACTGGCGTGTACCCGGCAAGCCCCTCCAGTTGGCTTATCGTGGTGGTGGGCGTGATGACAACGATGTACGCCAAGATCGACCCCTCGT
TAGGAATAATTGCAAAAATCAATCGGACTCTGGAAACGGCCAACTGCATGTCCAGCCAGACGAAGAACGTGGTCAGCGGCGTGCTGTTTG
GCACCGGCCTGTGGGTGGCCCTCATCGTCACCATGCGCTACTCCCTGAAAGTGCTGCTCTCCTACCACGGGTGGATGTTCACTGAGCACG
GCAAGATGAGTCGTGCCACCAAGATCTGGATGGGTATGGTCAAGATCTTTTCAGGCCGAAAACCCATGTTGTACAGCTTCCAGACATCGC
TGCCTCGCCTGCCGGTCCCGGCTGTCAAAGACACTGTGAACAGGAAAGGGTGAATCATGTTTAAGAAGGTCAACAGGATTGAGCACAAGA
GGAATAAGACAGAAAAACCAAAAAAGCTTAATCCATGGATTCCACGCATCTTCAACCACAAATGCTTTGTCACCTTCCTTACTGGCTGCT
ATAGTTGCCTCTGGAAATTCAGACAATGGGAAAAAACTAAAGTTGGATTTTGTTGCTGCACTTGGAAAGAGCAATTATTTTGCCGTGCCT
GGTAATTTCATTTGTCTTGTCTCTGATGTTGCTGTTCCTGTGGATAGAAACATCCAGTGAATACTTTAACTTTGACTGGGTCACTTTTCT
AGGAACAGGATACTGGTTTTTCTGGTCTATTTTTATTCTGAGTTTAGCTAGGATCCTGACTGCCTACTCTTCATTGCTGTTGTTACTTGG
ATTTTTGTTGCTTTGGGAAAGGATTGAACTATACCTGCACTTGTGTCATAAGATCCTGATTCTGCTAGTGATTCTTCTGTGTGTCATTTT
AATGTTCATTATATGCAAATTCTGGAAAGAAAGGTGGCTGGTAGCTGGGCTGTCAATGCAGATCTTTGCTCCCTACGTGCACCTGGTCAG
CATAACTGTGATGGTTATCCTTTTCTGGCCTGTGGCCTTCTACGTGGCATGTTTGGAAAGAGAAGTTAGAATGAGAAGATACAGGATGAC
ACATTCTGAGAAAAAAAGACTCAAGCAATGTAATGTAATCACAAGGTTAAGAGGTCTACAAGTGCCTGTTGGATTACCCTTTCTTCTTAT
CCTTTTAGGTCTCTATTTGATGCCACTGGGGATTTATTCTCCCTGCATTCAGGAGAAGGAGAATTTGGGGCCCAAGCCAACCATCTTTGG
ACATAGAGGTGCACCCATGTTGGGGCCTGAGAATACCATGATGTCCTTTGAGAAAGCTGTTGAACATGGAGCCCATGGATTGGAGACTGA
TATACACTTAAGTTATGATCATGTGCCTTTCCTCATGCATGACTTTGACCTGAAAAGAACAACCAATATTGGGGAAGTTCAGCCAGAATC
TGCCTGCGAGAACCCTGCCTTCTTCAACTGGGATTTCCTATCGACTCTGAATGCAGGCAAATGGTTTGTAAAACCAGAGCTCAGGCCATT
TTACAATATGAAACCTCTATCAGAGGCAGATAAAGAAAGAGCAAGAAATCAGTCAATTCCAACACTAGCTGATTTATTGACACTTGCAGA
GAAGGAAAGAAAATTTGTGATATTTGATCTTCATCGCCCTCCACCAAAACATCCTCTCAGACACACATTTGTCCGCCAAGTAGTAAGCGT
GATCCTTGCCTCTAAAATCGAGCAACATCTGATTTTTTGGTTGCCAGCTCATGATAGGCAATACGTCAGGTCCGTGGCTCCTGGTTTTCA
GCATGTGGGCCGTTTAGTATCCATTGAAACCCTTGCTAAAAACAATATCAGTATAATAAATGTTGACTACAAGAAGTTGTTCCCTAATGG
GTTAAGAGATTATAAAGCAGCTAACATCCATATCAACGTATACACCGTCAATGAGCCTTGGCTTTTCTCACTGGCCTGGTGCTCCAGGAT
TAACTCAGTGACCACAGACAACATTGGGCTCCTGAGTCAGCTTGATCACCCTCACTTCTTCATGACACCAAAGTTCTATGTGTTCATGTG
GCTCCTTGCAGATATCATTTCTGTGCTTTTTATTGTTGCCATATTTTGTTTTCACTGGCGGAGAGAGACTGAAAAAGAAAAATTGTTTGA
AACCTCCAGCACTCGCACAGATACTCAGAGTGGAAGTAAGAATGAGGAAGATAGATAGATAGATAGATTTGCACATAGCCATGAAACCTC
CTGTCCGAGTTGTGGAAGGTCCTTGGACTCTAGCAGCCCTCTACCCGGCTCTACCCAAGAGTGGAAAGGAACACCAAGGCCATTTCAATT
TTGCAGCACCATCCAAGAAACTACTACCTATCAAGAATGCTGTCACACCTTTGAAGCCTGGCAAGCATGAGATTCAACCACCGATGCCCA
CCGTGGTCTTTGAACTCACCCAAGCACCCACCAGGCAGGCTACAAGTGAGGCTACCTTTCAAACTACATTGCCCACCCTGAAGGTGGATA
AGCCAACCATGCCCTCCATAGAGGTCCCCTATCCTTAAATAAGAGACCTCTAAGAGATCCCCATGGCTGAATACTCCAAATAATCCTATG
TCACAATATATTCCATTGCATCTGACATAGCCTTCTGTGTTTCCAAAGAAGAATTAGCCACATCTCCCCTGCTTCTTCCTCTCTCTGCCT
AAGGGTGGTGATGGTGGGGAGTGGTTGATAAAGGCACACAGAAGGGCCACGGAGGCTCTCAGGGGAACCATTGTGCTCTCGCTATCAAGA
ATGCATCTCAAGGGGCTAGGCAAGGGGAAAACTGCTGTGTGTGGTCTTGGAACTGGTTGCTGTCAGGTTTATCTCATCCTAACACCTCCA

>19217_19217_1_CPT1A-GDPD4_CPT1A_chr11_68571467_ENST00000539743_GDPD4_chr11_76998463_ENST00000315938_length(amino acids)=542AA_BP=
MLLHLERAIILPCLVISFVLSLMLLFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIELYLHLCH
KILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRL
RGLQVPVGLPFLLILLGLYLMPLGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHVPFLMHDFD
LKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSEADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPK
HPLRHTFVRQVVSVILASKIEQHLIFWLPAHDRQYVRSVAPGFQHVGRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAANIHINVYTV
NEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISVLFIVAIFCFHWRRETEKEKLFETSSTRTDTQSGSKNEE

--------------------------------------------------------------
>19217_19217_2_CPT1A-GDPD4_CPT1A_chr11_68571467_ENST00000539743_GDPD4_chr11_76998463_ENST00000376217_length(transcript)=3086nt_BP=584nt
CTCCTTCTCCTTCCAGGTACTCTCTGAAGATGGCAGAAGCTCACCAAGCTGTGGCCTTTCAGTTCACGGTCACTCCGGACGGGATTGACC
TGCGGCTGAGCCATGAAGCTCTTAGACAAATCTATCTCTCTGGACTTCATTCCTGGAAAAAGAAGTTCATCAGATTCAAGAACGGCATCA
TCACTGGCGTGTACCCGGCAAGCCCCTCCAGTTGGCTTATCGTGGTGGTGGGCGTGATGACAACGATGTACGCCAAGATCGACCCCTCGT
TAGGAATAATTGCAAAAATCAATCGGACTCTGGAAACGGCCAACTGCATGTCCAGCCAGACGAAGAACGTGGTCAGCGGCGTGCTGTTTG
GCACCGGCCTGTGGGTGGCCCTCATCGTCACCATGCGCTACTCCCTGAAAGTGCTGCTCTCCTACCACGGGTGGATGTTCACTGAGCACG
GCAAGATGAGTCGTGCCACCAAGATCTGGATGGGTATGGTCAAGATCTTTTCAGGCCGAAAACCCATGTTGTACAGCTTCCAGACATCGC
TGCCTCGCCTGCCGGTCCCGGCTGTCAAAGACACTGTGAACAGGAAAGGGTGAATCATGTTTAAGAAGGTCAACAGGATTGAGCACAAGA
GGAATAAGACAGAAAAACCAAAAAAGCTTAATCCATGGATTCCACGCATCTTCAACCACAAATGCTTTGTCACCTTCCTTACTGGCTGCT
ATAGTTGCCTCTGGAAATTCAGACAATGGGAAAAAACTAAAGTTGGATTTTGTTGCTGCACTTGGAAAGAGCAATTATTTTGCCGTGCCT
GGTAATTTCATTTGTCTTGTCTCTGATGTTGCTGTTCCTGTGGATAGAAACATCCAGTGAATACTTTAACTTTGACTGGGTCACTTTTCT
AGGAACAGGATACTGGTTTTTCTGGTCTATTTTTATTCTGAGTTTAGCTAGGATCCTGACTGCCTACTCTTCATTGCTGTTGTTACTTGG
ATTTTTGTTGCTTTGGGAAAGGATTGAACTATACCTGCACTTGTGTCATAAGATCCTGATTCTGCTAGTGATTCTTCTGTGTGTCATTTT
AATGTTCATTATATGCAAATTCTGGAAAGAAAGGTGGCTGGTAGCTGGGCTGTCAATGCAGATCTTTGCTCCCTACGTGCACCTGGTCAG
CATAACTGTGATGGTTATCCTTTTCTGGCCTGTGGCCTTCTACGTGGCATGTTTGGAAAGAGAAGTTAGAATGAGAAGATACAGGATGAC
ACATTCTGAGAAAAAAAGACTCAAGCAATGTAATGTAATCACAAGGTTAAGAGGTCTACAAGTGCCTGTTGGATTACCCTTTCTTCTTAT
CCTTTTAGGTCTCTATTTGATGCCACTGGGGATTTATTCTCCCTGCATTCAGGAGAAGGAGAATTTGGGGCCCAAGCCAACCATCTTTGG
ACATAGAGGTGCACCCATGTTGGGGCCTGAGAATACCATGATGTCCTTTGAGAAAGCTGTTGAACATGGAGCCCATGGATTGGAGACTGA
TATACACTTAAGTTATGATCATGTGCCTTTCCTCATGCATGACTTTGACCTGAAAAGAACAACCAATATTGGGGAAGTTCAGCCAGAATC
TGCCTGCGAGAACCCTGCCTTCTTCAACTGGGATTTCCTATCGACTCTGAATGCAGGCAAATGGTTTGTAAAACCAGAGCTCAGGCCATT
TTACAATATGAAACCTCTATCAGAGGCAGATAAAGAAAGAGCAAGAAATCAGTCAATTCCAACACTAGCTGATTTATTGACACTTGCAGA
GAAGGAAAGAAAATTTGTGATATTTGATCTTCATCGCCCTCCACCAAAACATCCTCTCAGACACACATTTGTCCGCCAAGTAGTAAGCGT
GATCCTTGCCTCTAAAATCGAGCAACATCTGATTTTTTGGTTGCCAGCTCATGATAGGCAATACGTCAGGTCCGTGGCTCCTGGTTTTCA
GCATGTGGGCCGTTTAGTATCCATTGAAACCCTTGCTAAAAACAATATCAGTATAATAAATGTTGACTACAAGAAGTTGTTCCCTAATGG
GTTAAGAGATTATAAAGCAGCTAACATCCATATCAACGTATACACCGTCAATGAGCCTTGGCTTTTCTCACTGGCCTGGTGCTCCAGGAT
TAACTCAGTGACCACAGACAACATTGGGCTCCTGAGTCAGCTTGATCACCCTCACTTCTTCATGACACCAAAGTTCTATGTGTTCATGTG
GCTCCTTGCAGATATCATTTCTGTGCTTTTTATTGTTGCCATATTTTGTTTTCACTGGCGGAGAGAGACTGAAAAAGAAAAATTGTTTGA
AACCTCCAGCACTCGCACAGATACTCAGAGTGGAAATTTGCACATAGCCATGAAACCTCCTGTCCGAGTTGTGGAAGGTCCTTGGACTCT
AGCAGCCCTCTACCCGGCTCTACCCAAGAGTGGAAAGGAACACCAAGGCCATTTCAATTTTGCAGCACCATCCAAGAAACTACTACCTAT
CAAGAATGCTGTCACACCTTTGAAGCCTGGCAAGCATGAGATTCAACCACCGATGCCCACCGTGGTCTTTGAACTCACCCAAGCACCCAC
CAGGCAGGCTACAAGTGAGGCTACCTTTCAAACTACATTGCCCACCCTGAAGGTGGATAAGCCAACCATGCCCTCCATAGAGGTCCCCTA
TCCTTAAATAAGAGACCTCTAAGAGATCCCCATGGCTGAATACTCCAAATAATCCTATGTCACAATATATTCCATTGCATCTGACATAGC
CTTCTGTGTTTCCAAAGAAGAATTAGCCACATCTCCCCTGCTTCTTCCTCTCTCTGCCTAAGGGTGGTGATGGTGGGGAGTGGTTGATAA
AGGCACACAGAAGGGCCACGGAGGCTCTCAGGGGAACCATTGTGCTCTCGCTATCAAGAATGCATCTCAAGGGGCTAGGCAAGGGGAAAA
CTGCTGTGTGTGGTCTTGGAACTGGTTGCTGTCAGGTTTATCTCATCCTAACACCTCCATAATATTTTCTGCTAAAGGAGTGACTGTGCA

>19217_19217_2_CPT1A-GDPD4_CPT1A_chr11_68571467_ENST00000539743_GDPD4_chr11_76998463_ENST00000376217_length(amino acids)=645AA_BP=
MLLHLERAIILPCLVISFVLSLMLLFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIELYLHLCH
KILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRL
RGLQVPVGLPFLLILLGLYLMPLGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHVPFLMHDFD
LKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSEADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPK
HPLRHTFVRQVVSVILASKIEQHLIFWLPAHDRQYVRSVAPGFQHVGRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAANIHINVYTV
NEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISVLFIVAIFCFHWRRETEKEKLFETSSTRTDTQSGNLHIA
MKPPVRVVEGPWTLAALYPALPKSGKEHQGHFNFAAPSKKLLPIKNAVTPLKPGKHEIQPPMPTVVFELTQAPTRQATSEATFQTTLPTL

--------------------------------------------------------------
>19217_19217_3_CPT1A-GDPD4_CPT1A_chr11_68571467_ENST00000540367_GDPD4_chr11_76998463_ENST00000315938_length(transcript)=3117nt_BP=584nt
CTCCTTCTCCTTCCAGGTACTCTCTGAAGATGGCAGAAGCTCACCAAGCTGTGGCCTTTCAGTTCACGGTCACTCCGGACGGGATTGACC
TGCGGCTGAGCCATGAAGCTCTTAGACAAATCTATCTCTCTGGACTTCATTCCTGGAAAAAGAAGTTCATCAGATTCAAGAACGGCATCA
TCACTGGCGTGTACCCGGCAAGCCCCTCCAGTTGGCTTATCGTGGTGGTGGGCGTGATGACAACGATGTACGCCAAGATCGACCCCTCGT
TAGGAATAATTGCAAAAATCAATCGGACTCTGGAAACGGCCAACTGCATGTCCAGCCAGACGAAGAACGTGGTCAGCGGCGTGCTGTTTG
GCACCGGCCTGTGGGTGGCCCTCATCGTCACCATGCGCTACTCCCTGAAAGTGCTGCTCTCCTACCACGGGTGGATGTTCACTGAGCACG
GCAAGATGAGTCGTGCCACCAAGATCTGGATGGGTATGGTCAAGATCTTTTCAGGCCGAAAACCCATGTTGTACAGCTTCCAGACATCGC
TGCCTCGCCTGCCGGTCCCGGCTGTCAAAGACACTGTGAACAGGAAAGGGTGAATCATGTTTAAGAAGGTCAACAGGATTGAGCACAAGA
GGAATAAGACAGAAAAACCAAAAAAGCTTAATCCATGGATTCCACGCATCTTCAACCACAAATGCTTTGTCACCTTCCTTACTGGCTGCT
ATAGTTGCCTCTGGAAATTCAGACAATGGGAAAAAACTAAAGTTGGATTTTGTTGCTGCACTTGGAAAGAGCAATTATTTTGCCGTGCCT
GGTAATTTCATTTGTCTTGTCTCTGATGTTGCTGTTCCTGTGGATAGAAACATCCAGTGAATACTTTAACTTTGACTGGGTCACTTTTCT
AGGAACAGGATACTGGTTTTTCTGGTCTATTTTTATTCTGAGTTTAGCTAGGATCCTGACTGCCTACTCTTCATTGCTGTTGTTACTTGG
ATTTTTGTTGCTTTGGGAAAGGATTGAACTATACCTGCACTTGTGTCATAAGATCCTGATTCTGCTAGTGATTCTTCTGTGTGTCATTTT
AATGTTCATTATATGCAAATTCTGGAAAGAAAGGTGGCTGGTAGCTGGGCTGTCAATGCAGATCTTTGCTCCCTACGTGCACCTGGTCAG
CATAACTGTGATGGTTATCCTTTTCTGGCCTGTGGCCTTCTACGTGGCATGTTTGGAAAGAGAAGTTAGAATGAGAAGATACAGGATGAC
ACATTCTGAGAAAAAAAGACTCAAGCAATGTAATGTAATCACAAGGTTAAGAGGTCTACAAGTGCCTGTTGGATTACCCTTTCTTCTTAT
CCTTTTAGGTCTCTATTTGATGCCACTGGGGATTTATTCTCCCTGCATTCAGGAGAAGGAGAATTTGGGGCCCAAGCCAACCATCTTTGG
ACATAGAGGTGCACCCATGTTGGGGCCTGAGAATACCATGATGTCCTTTGAGAAAGCTGTTGAACATGGAGCCCATGGATTGGAGACTGA
TATACACTTAAGTTATGATCATGTGCCTTTCCTCATGCATGACTTTGACCTGAAAAGAACAACCAATATTGGGGAAGTTCAGCCAGAATC
TGCCTGCGAGAACCCTGCCTTCTTCAACTGGGATTTCCTATCGACTCTGAATGCAGGCAAATGGTTTGTAAAACCAGAGCTCAGGCCATT
TTACAATATGAAACCTCTATCAGAGGCAGATAAAGAAAGAGCAAGAAATCAGTCAATTCCAACACTAGCTGATTTATTGACACTTGCAGA
GAAGGAAAGAAAATTTGTGATATTTGATCTTCATCGCCCTCCACCAAAACATCCTCTCAGACACACATTTGTCCGCCAAGTAGTAAGCGT
GATCCTTGCCTCTAAAATCGAGCAACATCTGATTTTTTGGTTGCCAGCTCATGATAGGCAATACGTCAGGTCCGTGGCTCCTGGTTTTCA
GCATGTGGGCCGTTTAGTATCCATTGAAACCCTTGCTAAAAACAATATCAGTATAATAAATGTTGACTACAAGAAGTTGTTCCCTAATGG
GTTAAGAGATTATAAAGCAGCTAACATCCATATCAACGTATACACCGTCAATGAGCCTTGGCTTTTCTCACTGGCCTGGTGCTCCAGGAT
TAACTCAGTGACCACAGACAACATTGGGCTCCTGAGTCAGCTTGATCACCCTCACTTCTTCATGACACCAAAGTTCTATGTGTTCATGTG
GCTCCTTGCAGATATCATTTCTGTGCTTTTTATTGTTGCCATATTTTGTTTTCACTGGCGGAGAGAGACTGAAAAAGAAAAATTGTTTGA
AACCTCCAGCACTCGCACAGATACTCAGAGTGGAAGTAAGAATGAGGAAGATAGATAGATAGATAGATTTGCACATAGCCATGAAACCTC
CTGTCCGAGTTGTGGAAGGTCCTTGGACTCTAGCAGCCCTCTACCCGGCTCTACCCAAGAGTGGAAAGGAACACCAAGGCCATTTCAATT
TTGCAGCACCATCCAAGAAACTACTACCTATCAAGAATGCTGTCACACCTTTGAAGCCTGGCAAGCATGAGATTCAACCACCGATGCCCA
CCGTGGTCTTTGAACTCACCCAAGCACCCACCAGGCAGGCTACAAGTGAGGCTACCTTTCAAACTACATTGCCCACCCTGAAGGTGGATA
AGCCAACCATGCCCTCCATAGAGGTCCCCTATCCTTAAATAAGAGACCTCTAAGAGATCCCCATGGCTGAATACTCCAAATAATCCTATG
TCACAATATATTCCATTGCATCTGACATAGCCTTCTGTGTTTCCAAAGAAGAATTAGCCACATCTCCCCTGCTTCTTCCTCTCTCTGCCT
AAGGGTGGTGATGGTGGGGAGTGGTTGATAAAGGCACACAGAAGGGCCACGGAGGCTCTCAGGGGAACCATTGTGCTCTCGCTATCAAGA
ATGCATCTCAAGGGGCTAGGCAAGGGGAAAACTGCTGTGTGTGGTCTTGGAACTGGTTGCTGTCAGGTTTATCTCATCCTAACACCTCCA

>19217_19217_3_CPT1A-GDPD4_CPT1A_chr11_68571467_ENST00000540367_GDPD4_chr11_76998463_ENST00000315938_length(amino acids)=542AA_BP=
MLLHLERAIILPCLVISFVLSLMLLFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIELYLHLCH
KILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRL
RGLQVPVGLPFLLILLGLYLMPLGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHVPFLMHDFD
LKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSEADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPK
HPLRHTFVRQVVSVILASKIEQHLIFWLPAHDRQYVRSVAPGFQHVGRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAANIHINVYTV
NEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISVLFIVAIFCFHWRRETEKEKLFETSSTRTDTQSGSKNEE

--------------------------------------------------------------
>19217_19217_4_CPT1A-GDPD4_CPT1A_chr11_68571467_ENST00000540367_GDPD4_chr11_76998463_ENST00000376217_length(transcript)=3086nt_BP=584nt
CTCCTTCTCCTTCCAGGTACTCTCTGAAGATGGCAGAAGCTCACCAAGCTGTGGCCTTTCAGTTCACGGTCACTCCGGACGGGATTGACC
TGCGGCTGAGCCATGAAGCTCTTAGACAAATCTATCTCTCTGGACTTCATTCCTGGAAAAAGAAGTTCATCAGATTCAAGAACGGCATCA
TCACTGGCGTGTACCCGGCAAGCCCCTCCAGTTGGCTTATCGTGGTGGTGGGCGTGATGACAACGATGTACGCCAAGATCGACCCCTCGT
TAGGAATAATTGCAAAAATCAATCGGACTCTGGAAACGGCCAACTGCATGTCCAGCCAGACGAAGAACGTGGTCAGCGGCGTGCTGTTTG
GCACCGGCCTGTGGGTGGCCCTCATCGTCACCATGCGCTACTCCCTGAAAGTGCTGCTCTCCTACCACGGGTGGATGTTCACTGAGCACG
GCAAGATGAGTCGTGCCACCAAGATCTGGATGGGTATGGTCAAGATCTTTTCAGGCCGAAAACCCATGTTGTACAGCTTCCAGACATCGC
TGCCTCGCCTGCCGGTCCCGGCTGTCAAAGACACTGTGAACAGGAAAGGGTGAATCATGTTTAAGAAGGTCAACAGGATTGAGCACAAGA
GGAATAAGACAGAAAAACCAAAAAAGCTTAATCCATGGATTCCACGCATCTTCAACCACAAATGCTTTGTCACCTTCCTTACTGGCTGCT
ATAGTTGCCTCTGGAAATTCAGACAATGGGAAAAAACTAAAGTTGGATTTTGTTGCTGCACTTGGAAAGAGCAATTATTTTGCCGTGCCT
GGTAATTTCATTTGTCTTGTCTCTGATGTTGCTGTTCCTGTGGATAGAAACATCCAGTGAATACTTTAACTTTGACTGGGTCACTTTTCT
AGGAACAGGATACTGGTTTTTCTGGTCTATTTTTATTCTGAGTTTAGCTAGGATCCTGACTGCCTACTCTTCATTGCTGTTGTTACTTGG
ATTTTTGTTGCTTTGGGAAAGGATTGAACTATACCTGCACTTGTGTCATAAGATCCTGATTCTGCTAGTGATTCTTCTGTGTGTCATTTT
AATGTTCATTATATGCAAATTCTGGAAAGAAAGGTGGCTGGTAGCTGGGCTGTCAATGCAGATCTTTGCTCCCTACGTGCACCTGGTCAG
CATAACTGTGATGGTTATCCTTTTCTGGCCTGTGGCCTTCTACGTGGCATGTTTGGAAAGAGAAGTTAGAATGAGAAGATACAGGATGAC
ACATTCTGAGAAAAAAAGACTCAAGCAATGTAATGTAATCACAAGGTTAAGAGGTCTACAAGTGCCTGTTGGATTACCCTTTCTTCTTAT
CCTTTTAGGTCTCTATTTGATGCCACTGGGGATTTATTCTCCCTGCATTCAGGAGAAGGAGAATTTGGGGCCCAAGCCAACCATCTTTGG
ACATAGAGGTGCACCCATGTTGGGGCCTGAGAATACCATGATGTCCTTTGAGAAAGCTGTTGAACATGGAGCCCATGGATTGGAGACTGA
TATACACTTAAGTTATGATCATGTGCCTTTCCTCATGCATGACTTTGACCTGAAAAGAACAACCAATATTGGGGAAGTTCAGCCAGAATC
TGCCTGCGAGAACCCTGCCTTCTTCAACTGGGATTTCCTATCGACTCTGAATGCAGGCAAATGGTTTGTAAAACCAGAGCTCAGGCCATT
TTACAATATGAAACCTCTATCAGAGGCAGATAAAGAAAGAGCAAGAAATCAGTCAATTCCAACACTAGCTGATTTATTGACACTTGCAGA
GAAGGAAAGAAAATTTGTGATATTTGATCTTCATCGCCCTCCACCAAAACATCCTCTCAGACACACATTTGTCCGCCAAGTAGTAAGCGT
GATCCTTGCCTCTAAAATCGAGCAACATCTGATTTTTTGGTTGCCAGCTCATGATAGGCAATACGTCAGGTCCGTGGCTCCTGGTTTTCA
GCATGTGGGCCGTTTAGTATCCATTGAAACCCTTGCTAAAAACAATATCAGTATAATAAATGTTGACTACAAGAAGTTGTTCCCTAATGG
GTTAAGAGATTATAAAGCAGCTAACATCCATATCAACGTATACACCGTCAATGAGCCTTGGCTTTTCTCACTGGCCTGGTGCTCCAGGAT
TAACTCAGTGACCACAGACAACATTGGGCTCCTGAGTCAGCTTGATCACCCTCACTTCTTCATGACACCAAAGTTCTATGTGTTCATGTG
GCTCCTTGCAGATATCATTTCTGTGCTTTTTATTGTTGCCATATTTTGTTTTCACTGGCGGAGAGAGACTGAAAAAGAAAAATTGTTTGA
AACCTCCAGCACTCGCACAGATACTCAGAGTGGAAATTTGCACATAGCCATGAAACCTCCTGTCCGAGTTGTGGAAGGTCCTTGGACTCT
AGCAGCCCTCTACCCGGCTCTACCCAAGAGTGGAAAGGAACACCAAGGCCATTTCAATTTTGCAGCACCATCCAAGAAACTACTACCTAT
CAAGAATGCTGTCACACCTTTGAAGCCTGGCAAGCATGAGATTCAACCACCGATGCCCACCGTGGTCTTTGAACTCACCCAAGCACCCAC
CAGGCAGGCTACAAGTGAGGCTACCTTTCAAACTACATTGCCCACCCTGAAGGTGGATAAGCCAACCATGCCCTCCATAGAGGTCCCCTA
TCCTTAAATAAGAGACCTCTAAGAGATCCCCATGGCTGAATACTCCAAATAATCCTATGTCACAATATATTCCATTGCATCTGACATAGC
CTTCTGTGTTTCCAAAGAAGAATTAGCCACATCTCCCCTGCTTCTTCCTCTCTCTGCCTAAGGGTGGTGATGGTGGGGAGTGGTTGATAA
AGGCACACAGAAGGGCCACGGAGGCTCTCAGGGGAACCATTGTGCTCTCGCTATCAAGAATGCATCTCAAGGGGCTAGGCAAGGGGAAAA
CTGCTGTGTGTGGTCTTGGAACTGGTTGCTGTCAGGTTTATCTCATCCTAACACCTCCATAATATTTTCTGCTAAAGGAGTGACTGTGCA

>19217_19217_4_CPT1A-GDPD4_CPT1A_chr11_68571467_ENST00000540367_GDPD4_chr11_76998463_ENST00000376217_length(amino acids)=645AA_BP=
MLLHLERAIILPCLVISFVLSLMLLFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIELYLHLCH
KILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRL
RGLQVPVGLPFLLILLGLYLMPLGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHVPFLMHDFD
LKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSEADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPK
HPLRHTFVRQVVSVILASKIEQHLIFWLPAHDRQYVRSVAPGFQHVGRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAANIHINVYTV
NEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISVLFIVAIFCFHWRRETEKEKLFETSSTRTDTQSGNLHIA
MKPPVRVVEGPWTLAALYPALPKSGKEHQGHFNFAAPSKKLLPIKNAVTPLKPGKHEIQPPMPTVVFELTQAPTRQATSEATFQTTLPTL

--------------------------------------------------------------
>19217_19217_5_CPT1A-GDPD4_CPT1A_chr11_68571468_ENST00000539743_GDPD4_chr11_76998465_ENST00000315938_length(transcript)=3117nt_BP=584nt
CTCCTTCTCCTTCCAGGTACTCTCTGAAGATGGCAGAAGCTCACCAAGCTGTGGCCTTTCAGTTCACGGTCACTCCGGACGGGATTGACC
TGCGGCTGAGCCATGAAGCTCTTAGACAAATCTATCTCTCTGGACTTCATTCCTGGAAAAAGAAGTTCATCAGATTCAAGAACGGCATCA
TCACTGGCGTGTACCCGGCAAGCCCCTCCAGTTGGCTTATCGTGGTGGTGGGCGTGATGACAACGATGTACGCCAAGATCGACCCCTCGT
TAGGAATAATTGCAAAAATCAATCGGACTCTGGAAACGGCCAACTGCATGTCCAGCCAGACGAAGAACGTGGTCAGCGGCGTGCTGTTTG
GCACCGGCCTGTGGGTGGCCCTCATCGTCACCATGCGCTACTCCCTGAAAGTGCTGCTCTCCTACCACGGGTGGATGTTCACTGAGCACG
GCAAGATGAGTCGTGCCACCAAGATCTGGATGGGTATGGTCAAGATCTTTTCAGGCCGAAAACCCATGTTGTACAGCTTCCAGACATCGC
TGCCTCGCCTGCCGGTCCCGGCTGTCAAAGACACTGTGAACAGGAAAGGGTGAATCATGTTTAAGAAGGTCAACAGGATTGAGCACAAGA
GGAATAAGACAGAAAAACCAAAAAAGCTTAATCCATGGATTCCACGCATCTTCAACCACAAATGCTTTGTCACCTTCCTTACTGGCTGCT
ATAGTTGCCTCTGGAAATTCAGACAATGGGAAAAAACTAAAGTTGGATTTTGTTGCTGCACTTGGAAAGAGCAATTATTTTGCCGTGCCT
GGTAATTTCATTTGTCTTGTCTCTGATGTTGCTGTTCCTGTGGATAGAAACATCCAGTGAATACTTTAACTTTGACTGGGTCACTTTTCT
AGGAACAGGATACTGGTTTTTCTGGTCTATTTTTATTCTGAGTTTAGCTAGGATCCTGACTGCCTACTCTTCATTGCTGTTGTTACTTGG
ATTTTTGTTGCTTTGGGAAAGGATTGAACTATACCTGCACTTGTGTCATAAGATCCTGATTCTGCTAGTGATTCTTCTGTGTGTCATTTT
AATGTTCATTATATGCAAATTCTGGAAAGAAAGGTGGCTGGTAGCTGGGCTGTCAATGCAGATCTTTGCTCCCTACGTGCACCTGGTCAG
CATAACTGTGATGGTTATCCTTTTCTGGCCTGTGGCCTTCTACGTGGCATGTTTGGAAAGAGAAGTTAGAATGAGAAGATACAGGATGAC
ACATTCTGAGAAAAAAAGACTCAAGCAATGTAATGTAATCACAAGGTTAAGAGGTCTACAAGTGCCTGTTGGATTACCCTTTCTTCTTAT
CCTTTTAGGTCTCTATTTGATGCCACTGGGGATTTATTCTCCCTGCATTCAGGAGAAGGAGAATTTGGGGCCCAAGCCAACCATCTTTGG
ACATAGAGGTGCACCCATGTTGGGGCCTGAGAATACCATGATGTCCTTTGAGAAAGCTGTTGAACATGGAGCCCATGGATTGGAGACTGA
TATACACTTAAGTTATGATCATGTGCCTTTCCTCATGCATGACTTTGACCTGAAAAGAACAACCAATATTGGGGAAGTTCAGCCAGAATC
TGCCTGCGAGAACCCTGCCTTCTTCAACTGGGATTTCCTATCGACTCTGAATGCAGGCAAATGGTTTGTAAAACCAGAGCTCAGGCCATT
TTACAATATGAAACCTCTATCAGAGGCAGATAAAGAAAGAGCAAGAAATCAGTCAATTCCAACACTAGCTGATTTATTGACACTTGCAGA
GAAGGAAAGAAAATTTGTGATATTTGATCTTCATCGCCCTCCACCAAAACATCCTCTCAGACACACATTTGTCCGCCAAGTAGTAAGCGT
GATCCTTGCCTCTAAAATCGAGCAACATCTGATTTTTTGGTTGCCAGCTCATGATAGGCAATACGTCAGGTCCGTGGCTCCTGGTTTTCA
GCATGTGGGCCGTTTAGTATCCATTGAAACCCTTGCTAAAAACAATATCAGTATAATAAATGTTGACTACAAGAAGTTGTTCCCTAATGG
GTTAAGAGATTATAAAGCAGCTAACATCCATATCAACGTATACACCGTCAATGAGCCTTGGCTTTTCTCACTGGCCTGGTGCTCCAGGAT
TAACTCAGTGACCACAGACAACATTGGGCTCCTGAGTCAGCTTGATCACCCTCACTTCTTCATGACACCAAAGTTCTATGTGTTCATGTG
GCTCCTTGCAGATATCATTTCTGTGCTTTTTATTGTTGCCATATTTTGTTTTCACTGGCGGAGAGAGACTGAAAAAGAAAAATTGTTTGA
AACCTCCAGCACTCGCACAGATACTCAGAGTGGAAGTAAGAATGAGGAAGATAGATAGATAGATAGATTTGCACATAGCCATGAAACCTC
CTGTCCGAGTTGTGGAAGGTCCTTGGACTCTAGCAGCCCTCTACCCGGCTCTACCCAAGAGTGGAAAGGAACACCAAGGCCATTTCAATT
TTGCAGCACCATCCAAGAAACTACTACCTATCAAGAATGCTGTCACACCTTTGAAGCCTGGCAAGCATGAGATTCAACCACCGATGCCCA
CCGTGGTCTTTGAACTCACCCAAGCACCCACCAGGCAGGCTACAAGTGAGGCTACCTTTCAAACTACATTGCCCACCCTGAAGGTGGATA
AGCCAACCATGCCCTCCATAGAGGTCCCCTATCCTTAAATAAGAGACCTCTAAGAGATCCCCATGGCTGAATACTCCAAATAATCCTATG
TCACAATATATTCCATTGCATCTGACATAGCCTTCTGTGTTTCCAAAGAAGAATTAGCCACATCTCCCCTGCTTCTTCCTCTCTCTGCCT
AAGGGTGGTGATGGTGGGGAGTGGTTGATAAAGGCACACAGAAGGGCCACGGAGGCTCTCAGGGGAACCATTGTGCTCTCGCTATCAAGA
ATGCATCTCAAGGGGCTAGGCAAGGGGAAAACTGCTGTGTGTGGTCTTGGAACTGGTTGCTGTCAGGTTTATCTCATCCTAACACCTCCA

>19217_19217_5_CPT1A-GDPD4_CPT1A_chr11_68571468_ENST00000539743_GDPD4_chr11_76998465_ENST00000315938_length(amino acids)=542AA_BP=
MLLHLERAIILPCLVISFVLSLMLLFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIELYLHLCH
KILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRL
RGLQVPVGLPFLLILLGLYLMPLGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHVPFLMHDFD
LKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSEADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPK
HPLRHTFVRQVVSVILASKIEQHLIFWLPAHDRQYVRSVAPGFQHVGRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAANIHINVYTV
NEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISVLFIVAIFCFHWRRETEKEKLFETSSTRTDTQSGSKNEE

--------------------------------------------------------------
>19217_19217_6_CPT1A-GDPD4_CPT1A_chr11_68571468_ENST00000539743_GDPD4_chr11_76998465_ENST00000376217_length(transcript)=3086nt_BP=584nt
CTCCTTCTCCTTCCAGGTACTCTCTGAAGATGGCAGAAGCTCACCAAGCTGTGGCCTTTCAGTTCACGGTCACTCCGGACGGGATTGACC
TGCGGCTGAGCCATGAAGCTCTTAGACAAATCTATCTCTCTGGACTTCATTCCTGGAAAAAGAAGTTCATCAGATTCAAGAACGGCATCA
TCACTGGCGTGTACCCGGCAAGCCCCTCCAGTTGGCTTATCGTGGTGGTGGGCGTGATGACAACGATGTACGCCAAGATCGACCCCTCGT
TAGGAATAATTGCAAAAATCAATCGGACTCTGGAAACGGCCAACTGCATGTCCAGCCAGACGAAGAACGTGGTCAGCGGCGTGCTGTTTG
GCACCGGCCTGTGGGTGGCCCTCATCGTCACCATGCGCTACTCCCTGAAAGTGCTGCTCTCCTACCACGGGTGGATGTTCACTGAGCACG
GCAAGATGAGTCGTGCCACCAAGATCTGGATGGGTATGGTCAAGATCTTTTCAGGCCGAAAACCCATGTTGTACAGCTTCCAGACATCGC
TGCCTCGCCTGCCGGTCCCGGCTGTCAAAGACACTGTGAACAGGAAAGGGTGAATCATGTTTAAGAAGGTCAACAGGATTGAGCACAAGA
GGAATAAGACAGAAAAACCAAAAAAGCTTAATCCATGGATTCCACGCATCTTCAACCACAAATGCTTTGTCACCTTCCTTACTGGCTGCT
ATAGTTGCCTCTGGAAATTCAGACAATGGGAAAAAACTAAAGTTGGATTTTGTTGCTGCACTTGGAAAGAGCAATTATTTTGCCGTGCCT
GGTAATTTCATTTGTCTTGTCTCTGATGTTGCTGTTCCTGTGGATAGAAACATCCAGTGAATACTTTAACTTTGACTGGGTCACTTTTCT
AGGAACAGGATACTGGTTTTTCTGGTCTATTTTTATTCTGAGTTTAGCTAGGATCCTGACTGCCTACTCTTCATTGCTGTTGTTACTTGG
ATTTTTGTTGCTTTGGGAAAGGATTGAACTATACCTGCACTTGTGTCATAAGATCCTGATTCTGCTAGTGATTCTTCTGTGTGTCATTTT
AATGTTCATTATATGCAAATTCTGGAAAGAAAGGTGGCTGGTAGCTGGGCTGTCAATGCAGATCTTTGCTCCCTACGTGCACCTGGTCAG
CATAACTGTGATGGTTATCCTTTTCTGGCCTGTGGCCTTCTACGTGGCATGTTTGGAAAGAGAAGTTAGAATGAGAAGATACAGGATGAC
ACATTCTGAGAAAAAAAGACTCAAGCAATGTAATGTAATCACAAGGTTAAGAGGTCTACAAGTGCCTGTTGGATTACCCTTTCTTCTTAT
CCTTTTAGGTCTCTATTTGATGCCACTGGGGATTTATTCTCCCTGCATTCAGGAGAAGGAGAATTTGGGGCCCAAGCCAACCATCTTTGG
ACATAGAGGTGCACCCATGTTGGGGCCTGAGAATACCATGATGTCCTTTGAGAAAGCTGTTGAACATGGAGCCCATGGATTGGAGACTGA
TATACACTTAAGTTATGATCATGTGCCTTTCCTCATGCATGACTTTGACCTGAAAAGAACAACCAATATTGGGGAAGTTCAGCCAGAATC
TGCCTGCGAGAACCCTGCCTTCTTCAACTGGGATTTCCTATCGACTCTGAATGCAGGCAAATGGTTTGTAAAACCAGAGCTCAGGCCATT
TTACAATATGAAACCTCTATCAGAGGCAGATAAAGAAAGAGCAAGAAATCAGTCAATTCCAACACTAGCTGATTTATTGACACTTGCAGA
GAAGGAAAGAAAATTTGTGATATTTGATCTTCATCGCCCTCCACCAAAACATCCTCTCAGACACACATTTGTCCGCCAAGTAGTAAGCGT
GATCCTTGCCTCTAAAATCGAGCAACATCTGATTTTTTGGTTGCCAGCTCATGATAGGCAATACGTCAGGTCCGTGGCTCCTGGTTTTCA
GCATGTGGGCCGTTTAGTATCCATTGAAACCCTTGCTAAAAACAATATCAGTATAATAAATGTTGACTACAAGAAGTTGTTCCCTAATGG
GTTAAGAGATTATAAAGCAGCTAACATCCATATCAACGTATACACCGTCAATGAGCCTTGGCTTTTCTCACTGGCCTGGTGCTCCAGGAT
TAACTCAGTGACCACAGACAACATTGGGCTCCTGAGTCAGCTTGATCACCCTCACTTCTTCATGACACCAAAGTTCTATGTGTTCATGTG
GCTCCTTGCAGATATCATTTCTGTGCTTTTTATTGTTGCCATATTTTGTTTTCACTGGCGGAGAGAGACTGAAAAAGAAAAATTGTTTGA
AACCTCCAGCACTCGCACAGATACTCAGAGTGGAAATTTGCACATAGCCATGAAACCTCCTGTCCGAGTTGTGGAAGGTCCTTGGACTCT
AGCAGCCCTCTACCCGGCTCTACCCAAGAGTGGAAAGGAACACCAAGGCCATTTCAATTTTGCAGCACCATCCAAGAAACTACTACCTAT
CAAGAATGCTGTCACACCTTTGAAGCCTGGCAAGCATGAGATTCAACCACCGATGCCCACCGTGGTCTTTGAACTCACCCAAGCACCCAC
CAGGCAGGCTACAAGTGAGGCTACCTTTCAAACTACATTGCCCACCCTGAAGGTGGATAAGCCAACCATGCCCTCCATAGAGGTCCCCTA
TCCTTAAATAAGAGACCTCTAAGAGATCCCCATGGCTGAATACTCCAAATAATCCTATGTCACAATATATTCCATTGCATCTGACATAGC
CTTCTGTGTTTCCAAAGAAGAATTAGCCACATCTCCCCTGCTTCTTCCTCTCTCTGCCTAAGGGTGGTGATGGTGGGGAGTGGTTGATAA
AGGCACACAGAAGGGCCACGGAGGCTCTCAGGGGAACCATTGTGCTCTCGCTATCAAGAATGCATCTCAAGGGGCTAGGCAAGGGGAAAA
CTGCTGTGTGTGGTCTTGGAACTGGTTGCTGTCAGGTTTATCTCATCCTAACACCTCCATAATATTTTCTGCTAAAGGAGTGACTGTGCA

>19217_19217_6_CPT1A-GDPD4_CPT1A_chr11_68571468_ENST00000539743_GDPD4_chr11_76998465_ENST00000376217_length(amino acids)=645AA_BP=
MLLHLERAIILPCLVISFVLSLMLLFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIELYLHLCH
KILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRL
RGLQVPVGLPFLLILLGLYLMPLGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHVPFLMHDFD
LKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSEADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPK
HPLRHTFVRQVVSVILASKIEQHLIFWLPAHDRQYVRSVAPGFQHVGRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAANIHINVYTV
NEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISVLFIVAIFCFHWRRETEKEKLFETSSTRTDTQSGNLHIA
MKPPVRVVEGPWTLAALYPALPKSGKEHQGHFNFAAPSKKLLPIKNAVTPLKPGKHEIQPPMPTVVFELTQAPTRQATSEATFQTTLPTL

--------------------------------------------------------------
>19217_19217_7_CPT1A-GDPD4_CPT1A_chr11_68571468_ENST00000540367_GDPD4_chr11_76998465_ENST00000315938_length(transcript)=3117nt_BP=584nt
CTCCTTCTCCTTCCAGGTACTCTCTGAAGATGGCAGAAGCTCACCAAGCTGTGGCCTTTCAGTTCACGGTCACTCCGGACGGGATTGACC
TGCGGCTGAGCCATGAAGCTCTTAGACAAATCTATCTCTCTGGACTTCATTCCTGGAAAAAGAAGTTCATCAGATTCAAGAACGGCATCA
TCACTGGCGTGTACCCGGCAAGCCCCTCCAGTTGGCTTATCGTGGTGGTGGGCGTGATGACAACGATGTACGCCAAGATCGACCCCTCGT
TAGGAATAATTGCAAAAATCAATCGGACTCTGGAAACGGCCAACTGCATGTCCAGCCAGACGAAGAACGTGGTCAGCGGCGTGCTGTTTG
GCACCGGCCTGTGGGTGGCCCTCATCGTCACCATGCGCTACTCCCTGAAAGTGCTGCTCTCCTACCACGGGTGGATGTTCACTGAGCACG
GCAAGATGAGTCGTGCCACCAAGATCTGGATGGGTATGGTCAAGATCTTTTCAGGCCGAAAACCCATGTTGTACAGCTTCCAGACATCGC
TGCCTCGCCTGCCGGTCCCGGCTGTCAAAGACACTGTGAACAGGAAAGGGTGAATCATGTTTAAGAAGGTCAACAGGATTGAGCACAAGA
GGAATAAGACAGAAAAACCAAAAAAGCTTAATCCATGGATTCCACGCATCTTCAACCACAAATGCTTTGTCACCTTCCTTACTGGCTGCT
ATAGTTGCCTCTGGAAATTCAGACAATGGGAAAAAACTAAAGTTGGATTTTGTTGCTGCACTTGGAAAGAGCAATTATTTTGCCGTGCCT
GGTAATTTCATTTGTCTTGTCTCTGATGTTGCTGTTCCTGTGGATAGAAACATCCAGTGAATACTTTAACTTTGACTGGGTCACTTTTCT
AGGAACAGGATACTGGTTTTTCTGGTCTATTTTTATTCTGAGTTTAGCTAGGATCCTGACTGCCTACTCTTCATTGCTGTTGTTACTTGG
ATTTTTGTTGCTTTGGGAAAGGATTGAACTATACCTGCACTTGTGTCATAAGATCCTGATTCTGCTAGTGATTCTTCTGTGTGTCATTTT
AATGTTCATTATATGCAAATTCTGGAAAGAAAGGTGGCTGGTAGCTGGGCTGTCAATGCAGATCTTTGCTCCCTACGTGCACCTGGTCAG
CATAACTGTGATGGTTATCCTTTTCTGGCCTGTGGCCTTCTACGTGGCATGTTTGGAAAGAGAAGTTAGAATGAGAAGATACAGGATGAC
ACATTCTGAGAAAAAAAGACTCAAGCAATGTAATGTAATCACAAGGTTAAGAGGTCTACAAGTGCCTGTTGGATTACCCTTTCTTCTTAT
CCTTTTAGGTCTCTATTTGATGCCACTGGGGATTTATTCTCCCTGCATTCAGGAGAAGGAGAATTTGGGGCCCAAGCCAACCATCTTTGG
ACATAGAGGTGCACCCATGTTGGGGCCTGAGAATACCATGATGTCCTTTGAGAAAGCTGTTGAACATGGAGCCCATGGATTGGAGACTGA
TATACACTTAAGTTATGATCATGTGCCTTTCCTCATGCATGACTTTGACCTGAAAAGAACAACCAATATTGGGGAAGTTCAGCCAGAATC
TGCCTGCGAGAACCCTGCCTTCTTCAACTGGGATTTCCTATCGACTCTGAATGCAGGCAAATGGTTTGTAAAACCAGAGCTCAGGCCATT
TTACAATATGAAACCTCTATCAGAGGCAGATAAAGAAAGAGCAAGAAATCAGTCAATTCCAACACTAGCTGATTTATTGACACTTGCAGA
GAAGGAAAGAAAATTTGTGATATTTGATCTTCATCGCCCTCCACCAAAACATCCTCTCAGACACACATTTGTCCGCCAAGTAGTAAGCGT
GATCCTTGCCTCTAAAATCGAGCAACATCTGATTTTTTGGTTGCCAGCTCATGATAGGCAATACGTCAGGTCCGTGGCTCCTGGTTTTCA
GCATGTGGGCCGTTTAGTATCCATTGAAACCCTTGCTAAAAACAATATCAGTATAATAAATGTTGACTACAAGAAGTTGTTCCCTAATGG
GTTAAGAGATTATAAAGCAGCTAACATCCATATCAACGTATACACCGTCAATGAGCCTTGGCTTTTCTCACTGGCCTGGTGCTCCAGGAT
TAACTCAGTGACCACAGACAACATTGGGCTCCTGAGTCAGCTTGATCACCCTCACTTCTTCATGACACCAAAGTTCTATGTGTTCATGTG
GCTCCTTGCAGATATCATTTCTGTGCTTTTTATTGTTGCCATATTTTGTTTTCACTGGCGGAGAGAGACTGAAAAAGAAAAATTGTTTGA
AACCTCCAGCACTCGCACAGATACTCAGAGTGGAAGTAAGAATGAGGAAGATAGATAGATAGATAGATTTGCACATAGCCATGAAACCTC
CTGTCCGAGTTGTGGAAGGTCCTTGGACTCTAGCAGCCCTCTACCCGGCTCTACCCAAGAGTGGAAAGGAACACCAAGGCCATTTCAATT
TTGCAGCACCATCCAAGAAACTACTACCTATCAAGAATGCTGTCACACCTTTGAAGCCTGGCAAGCATGAGATTCAACCACCGATGCCCA
CCGTGGTCTTTGAACTCACCCAAGCACCCACCAGGCAGGCTACAAGTGAGGCTACCTTTCAAACTACATTGCCCACCCTGAAGGTGGATA
AGCCAACCATGCCCTCCATAGAGGTCCCCTATCCTTAAATAAGAGACCTCTAAGAGATCCCCATGGCTGAATACTCCAAATAATCCTATG
TCACAATATATTCCATTGCATCTGACATAGCCTTCTGTGTTTCCAAAGAAGAATTAGCCACATCTCCCCTGCTTCTTCCTCTCTCTGCCT
AAGGGTGGTGATGGTGGGGAGTGGTTGATAAAGGCACACAGAAGGGCCACGGAGGCTCTCAGGGGAACCATTGTGCTCTCGCTATCAAGA
ATGCATCTCAAGGGGCTAGGCAAGGGGAAAACTGCTGTGTGTGGTCTTGGAACTGGTTGCTGTCAGGTTTATCTCATCCTAACACCTCCA

>19217_19217_7_CPT1A-GDPD4_CPT1A_chr11_68571468_ENST00000540367_GDPD4_chr11_76998465_ENST00000315938_length(amino acids)=542AA_BP=
MLLHLERAIILPCLVISFVLSLMLLFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIELYLHLCH
KILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRL
RGLQVPVGLPFLLILLGLYLMPLGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHVPFLMHDFD
LKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSEADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPK
HPLRHTFVRQVVSVILASKIEQHLIFWLPAHDRQYVRSVAPGFQHVGRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAANIHINVYTV
NEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISVLFIVAIFCFHWRRETEKEKLFETSSTRTDTQSGSKNEE

--------------------------------------------------------------
>19217_19217_8_CPT1A-GDPD4_CPT1A_chr11_68571468_ENST00000540367_GDPD4_chr11_76998465_ENST00000376217_length(transcript)=3086nt_BP=584nt
CTCCTTCTCCTTCCAGGTACTCTCTGAAGATGGCAGAAGCTCACCAAGCTGTGGCCTTTCAGTTCACGGTCACTCCGGACGGGATTGACC
TGCGGCTGAGCCATGAAGCTCTTAGACAAATCTATCTCTCTGGACTTCATTCCTGGAAAAAGAAGTTCATCAGATTCAAGAACGGCATCA
TCACTGGCGTGTACCCGGCAAGCCCCTCCAGTTGGCTTATCGTGGTGGTGGGCGTGATGACAACGATGTACGCCAAGATCGACCCCTCGT
TAGGAATAATTGCAAAAATCAATCGGACTCTGGAAACGGCCAACTGCATGTCCAGCCAGACGAAGAACGTGGTCAGCGGCGTGCTGTTTG
GCACCGGCCTGTGGGTGGCCCTCATCGTCACCATGCGCTACTCCCTGAAAGTGCTGCTCTCCTACCACGGGTGGATGTTCACTGAGCACG
GCAAGATGAGTCGTGCCACCAAGATCTGGATGGGTATGGTCAAGATCTTTTCAGGCCGAAAACCCATGTTGTACAGCTTCCAGACATCGC
TGCCTCGCCTGCCGGTCCCGGCTGTCAAAGACACTGTGAACAGGAAAGGGTGAATCATGTTTAAGAAGGTCAACAGGATTGAGCACAAGA
GGAATAAGACAGAAAAACCAAAAAAGCTTAATCCATGGATTCCACGCATCTTCAACCACAAATGCTTTGTCACCTTCCTTACTGGCTGCT
ATAGTTGCCTCTGGAAATTCAGACAATGGGAAAAAACTAAAGTTGGATTTTGTTGCTGCACTTGGAAAGAGCAATTATTTTGCCGTGCCT
GGTAATTTCATTTGTCTTGTCTCTGATGTTGCTGTTCCTGTGGATAGAAACATCCAGTGAATACTTTAACTTTGACTGGGTCACTTTTCT
AGGAACAGGATACTGGTTTTTCTGGTCTATTTTTATTCTGAGTTTAGCTAGGATCCTGACTGCCTACTCTTCATTGCTGTTGTTACTTGG
ATTTTTGTTGCTTTGGGAAAGGATTGAACTATACCTGCACTTGTGTCATAAGATCCTGATTCTGCTAGTGATTCTTCTGTGTGTCATTTT
AATGTTCATTATATGCAAATTCTGGAAAGAAAGGTGGCTGGTAGCTGGGCTGTCAATGCAGATCTTTGCTCCCTACGTGCACCTGGTCAG
CATAACTGTGATGGTTATCCTTTTCTGGCCTGTGGCCTTCTACGTGGCATGTTTGGAAAGAGAAGTTAGAATGAGAAGATACAGGATGAC
ACATTCTGAGAAAAAAAGACTCAAGCAATGTAATGTAATCACAAGGTTAAGAGGTCTACAAGTGCCTGTTGGATTACCCTTTCTTCTTAT
CCTTTTAGGTCTCTATTTGATGCCACTGGGGATTTATTCTCCCTGCATTCAGGAGAAGGAGAATTTGGGGCCCAAGCCAACCATCTTTGG
ACATAGAGGTGCACCCATGTTGGGGCCTGAGAATACCATGATGTCCTTTGAGAAAGCTGTTGAACATGGAGCCCATGGATTGGAGACTGA
TATACACTTAAGTTATGATCATGTGCCTTTCCTCATGCATGACTTTGACCTGAAAAGAACAACCAATATTGGGGAAGTTCAGCCAGAATC
TGCCTGCGAGAACCCTGCCTTCTTCAACTGGGATTTCCTATCGACTCTGAATGCAGGCAAATGGTTTGTAAAACCAGAGCTCAGGCCATT
TTACAATATGAAACCTCTATCAGAGGCAGATAAAGAAAGAGCAAGAAATCAGTCAATTCCAACACTAGCTGATTTATTGACACTTGCAGA
GAAGGAAAGAAAATTTGTGATATTTGATCTTCATCGCCCTCCACCAAAACATCCTCTCAGACACACATTTGTCCGCCAAGTAGTAAGCGT
GATCCTTGCCTCTAAAATCGAGCAACATCTGATTTTTTGGTTGCCAGCTCATGATAGGCAATACGTCAGGTCCGTGGCTCCTGGTTTTCA
GCATGTGGGCCGTTTAGTATCCATTGAAACCCTTGCTAAAAACAATATCAGTATAATAAATGTTGACTACAAGAAGTTGTTCCCTAATGG
GTTAAGAGATTATAAAGCAGCTAACATCCATATCAACGTATACACCGTCAATGAGCCTTGGCTTTTCTCACTGGCCTGGTGCTCCAGGAT
TAACTCAGTGACCACAGACAACATTGGGCTCCTGAGTCAGCTTGATCACCCTCACTTCTTCATGACACCAAAGTTCTATGTGTTCATGTG
GCTCCTTGCAGATATCATTTCTGTGCTTTTTATTGTTGCCATATTTTGTTTTCACTGGCGGAGAGAGACTGAAAAAGAAAAATTGTTTGA
AACCTCCAGCACTCGCACAGATACTCAGAGTGGAAATTTGCACATAGCCATGAAACCTCCTGTCCGAGTTGTGGAAGGTCCTTGGACTCT
AGCAGCCCTCTACCCGGCTCTACCCAAGAGTGGAAAGGAACACCAAGGCCATTTCAATTTTGCAGCACCATCCAAGAAACTACTACCTAT
CAAGAATGCTGTCACACCTTTGAAGCCTGGCAAGCATGAGATTCAACCACCGATGCCCACCGTGGTCTTTGAACTCACCCAAGCACCCAC
CAGGCAGGCTACAAGTGAGGCTACCTTTCAAACTACATTGCCCACCCTGAAGGTGGATAAGCCAACCATGCCCTCCATAGAGGTCCCCTA
TCCTTAAATAAGAGACCTCTAAGAGATCCCCATGGCTGAATACTCCAAATAATCCTATGTCACAATATATTCCATTGCATCTGACATAGC
CTTCTGTGTTTCCAAAGAAGAATTAGCCACATCTCCCCTGCTTCTTCCTCTCTCTGCCTAAGGGTGGTGATGGTGGGGAGTGGTTGATAA
AGGCACACAGAAGGGCCACGGAGGCTCTCAGGGGAACCATTGTGCTCTCGCTATCAAGAATGCATCTCAAGGGGCTAGGCAAGGGGAAAA
CTGCTGTGTGTGGTCTTGGAACTGGTTGCTGTCAGGTTTATCTCATCCTAACACCTCCATAATATTTTCTGCTAAAGGAGTGACTGTGCA

>19217_19217_8_CPT1A-GDPD4_CPT1A_chr11_68571468_ENST00000540367_GDPD4_chr11_76998465_ENST00000376217_length(amino acids)=645AA_BP=
MLLHLERAIILPCLVISFVLSLMLLFLWIETSSEYFNFDWVTFLGTGYWFFWSIFILSLARILTAYSSLLLLLGFLLLWERIELYLHLCH
KILILLVILLCVILMFIICKFWKERWLVAGLSMQIFAPYVHLVSITVMVILFWPVAFYVACLEREVRMRRYRMTHSEKKRLKQCNVITRL
RGLQVPVGLPFLLILLGLYLMPLGIYSPCIQEKENLGPKPTIFGHRGAPMLGPENTMMSFEKAVEHGAHGLETDIHLSYDHVPFLMHDFD
LKRTTNIGEVQPESACENPAFFNWDFLSTLNAGKWFVKPELRPFYNMKPLSEADKERARNQSIPTLADLLTLAEKERKFVIFDLHRPPPK
HPLRHTFVRQVVSVILASKIEQHLIFWLPAHDRQYVRSVAPGFQHVGRLVSIETLAKNNISIINVDYKKLFPNGLRDYKAANIHINVYTV
NEPWLFSLAWCSRINSVTTDNIGLLSQLDHPHFFMTPKFYVFMWLLADIISVLFIVAIFCFHWRRETEKEKLFETSSTRTDTQSGNLHIA
MKPPVRVVEGPWTLAALYPALPKSGKEHQGHFNFAAPSKKLLPIKNAVTPLKPGKHEIQPPMPTVVFELTQAPTRQATSEATFQTTLPTL

--------------------------------------------------------------

Top

Fusion Gene PPI Analysis for CPT1A-GDPD4


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

Related Drugs for CPT1A-GDPD4


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

Related Diseases for CPT1A-GDPD4


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource