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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:CSGALNACT1-TMEM150A (FusionGDB2 ID:19699)

Fusion Gene Summary for CSGALNACT1-TMEM150A

check button Fusion gene summary
Fusion gene informationFusion gene name: CSGALNACT1-TMEM150A
Fusion gene ID: 19699
HgeneTgene
Gene symbol

CSGALNACT1

TMEM150A

Gene ID

55790

129303

Gene namechondroitin sulfate N-acetylgalactosaminyltransferase 1transmembrane protein 150A
SynonymsCSGalNAcT-1|ChGn|ChGn-1|beta4GalNAcTTM6P1|TMEM150|TTN1
Cytomap

8p21.3

2p11.2

Type of geneprotein-codingprotein-coding
Descriptionchondroitin sulfate N-acetylgalactosaminyltransferase 1beta4GalNAcT-1chondroitin beta-1,4-N-acetylgalactosaminyltransferase 1chondroitin beta1,4 N-acetylgalactosaminyltransferaseglucuronylgalactosylproteoglycan 4-beta-N- acetylgalactosaminyltransferastransmembrane protein 150Afasting-inducible integral membrane protein TM6P1tentonin 1transmembrane protein 150
Modification date2020031320200320
UniProtAcc

Q8TDX6

.
Ensembl transtripts involved in fusion geneENST00000518542, ENST00000311540, 
ENST00000332246, ENST00000454498, 
ENST00000522854, ENST00000544602, 
ENST00000306353, ENST00000334462, 
ENST00000409668, 
Fusion gene scores* DoF score8 X 10 X 4=3202 X 2 X 2=8
# samples 103
** MAII scorelog2(10/320*10)=-1.67807190511264
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(3/8*10)=1.90689059560852
Context

PubMed: CSGALNACT1 [Title/Abstract] AND TMEM150A [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointCSGALNACT1(19315937)-TMEM150A(85826825), # samples:3
Anticipated loss of major functional domain due to fusion event.CSGALNACT1-TMEM150A seems lost the major protein functional domain in Hgene partner, which is a cell metabolism gene due to the frame-shifted ORF.
CSGALNACT1-TMEM150A seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneCSGALNACT1

GO:0019276

UDP-N-acetylgalactosamine metabolic process

11514575

HgeneCSGALNACT1

GO:0030206

chondroitin sulfate biosynthetic process

11514575|12163485

HgeneCSGALNACT1

GO:0046398

UDP-glucuronate metabolic process

11514575

HgeneCSGALNACT1

GO:0050653

chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

12163485

TgeneTMEM150A

GO:0072659

protein localization to plasma membrane

25608530


check buttonFusion gene breakpoints across CSGALNACT1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across TMEM150A (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4PRADTCGA-EJ-A46F-01ACSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
ChimerDB4PRADTCGA-EJ-A46FCSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
ChimerDB4PRADTCGA-EJ-A46FCSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-


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Fusion Gene ORF analysis for CSGALNACT1-TMEM150A

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5UTR-3CDSENST00000518542ENST00000306353CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
5UTR-3CDSENST00000518542ENST00000306353CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
5UTR-3CDSENST00000518542ENST00000334462CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
5UTR-3CDSENST00000518542ENST00000334462CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
5UTR-3CDSENST00000518542ENST00000409668CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
5UTR-3CDSENST00000518542ENST00000409668CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
Frame-shiftENST00000311540ENST00000306353CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
Frame-shiftENST00000311540ENST00000306353CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
Frame-shiftENST00000311540ENST00000334462CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
Frame-shiftENST00000311540ENST00000334462CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
Frame-shiftENST00000311540ENST00000409668CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
Frame-shiftENST00000311540ENST00000409668CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
Frame-shiftENST00000332246ENST00000306353CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
Frame-shiftENST00000332246ENST00000306353CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
Frame-shiftENST00000332246ENST00000334462CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
Frame-shiftENST00000332246ENST00000334462CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
Frame-shiftENST00000332246ENST00000409668CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
Frame-shiftENST00000332246ENST00000409668CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
Frame-shiftENST00000454498ENST00000306353CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
Frame-shiftENST00000454498ENST00000306353CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
Frame-shiftENST00000454498ENST00000334462CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
Frame-shiftENST00000454498ENST00000334462CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
Frame-shiftENST00000454498ENST00000409668CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
Frame-shiftENST00000454498ENST00000409668CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
Frame-shiftENST00000522854ENST00000306353CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
Frame-shiftENST00000522854ENST00000306353CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
Frame-shiftENST00000522854ENST00000334462CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
Frame-shiftENST00000522854ENST00000334462CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
Frame-shiftENST00000522854ENST00000409668CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
Frame-shiftENST00000522854ENST00000409668CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
In-frameENST00000544602ENST00000306353CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
In-frameENST00000544602ENST00000306353CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
In-frameENST00000544602ENST00000334462CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
In-frameENST00000544602ENST00000334462CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-
In-frameENST00000544602ENST00000409668CSGALNACT1chr8

19315937

-TMEM150Achr2

85826825

-
In-frameENST00000544602ENST00000409668CSGALNACT1chr8

19315936

-TMEM150Achr2

85826825

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000544602CSGALNACT1chr819315937-ENST00000306353TMEM150Achr285826825-221212644131678421
ENST00000544602CSGALNACT1chr819315937-ENST00000334462TMEM150Achr285826825-219812644131678421
ENST00000544602CSGALNACT1chr819315937-ENST00000409668TMEM150Achr285826825-217612644131678421
ENST00000544602CSGALNACT1chr819315936-ENST00000306353TMEM150Achr285826825-221212644131678421
ENST00000544602CSGALNACT1chr819315936-ENST00000334462TMEM150Achr285826825-219812644131678421
ENST00000544602CSGALNACT1chr819315936-ENST00000409668TMEM150Achr285826825-217612644131678421

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000544602ENST00000306353CSGALNACT1chr819315937-TMEM150Achr285826825-0.0612119030.9387881
ENST00000544602ENST00000334462CSGALNACT1chr819315937-TMEM150Achr285826825-0.060830120.9391699
ENST00000544602ENST00000409668CSGALNACT1chr819315937-TMEM150Achr285826825-0.069958210.93004185
ENST00000544602ENST00000306353CSGALNACT1chr819315936-TMEM150Achr285826825-0.0612119030.9387881
ENST00000544602ENST00000334462CSGALNACT1chr819315936-TMEM150Achr285826825-0.060830120.9391699
ENST00000544602ENST00000409668CSGALNACT1chr819315936-TMEM150Achr285826825-0.069958210.93004185

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Fusion Genomic Features for CSGALNACT1-TMEM150A


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for CSGALNACT1-TMEM150A


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr8:19315937/chr2:85826825)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
CSGALNACT1

Q8TDX6

.
FUNCTION: Transfers 1,4-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to the non-reducing end of glucuronic acid (GlcUA). Required for addition of the first GalNAc to the core tetrasaccharide linker and for elongation of chondroitin chains. Important role in chondroitin chain biosynthesis in cartilage formation and subsequent endochondral ossification (PubMed:11788602, PubMed:12163485, PubMed:12446672, PubMed:17145758, PubMed:31705726). Moreover, is involved in the metabolism of aggrecan (By similarity). {ECO:0000250|UniProtKB:Q8BJQ9, ECO:0000269|PubMed:11788602, ECO:0000269|PubMed:12163485, ECO:0000269|PubMed:12446672, ECO:0000269|PubMed:17145758, ECO:0000269|PubMed:21160489, ECO:0000269|PubMed:27599773, ECO:0000269|PubMed:31705726}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000311540-4957_100283533.0Coiled coilOntology_term=ECO:0000255
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000332246-51057_100283533.0Coiled coilOntology_term=ECO:0000255
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000454498-51057_100283533.0Coiled coilOntology_term=ECO:0000255
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000522854-3857_100283533.0Coiled coilOntology_term=ECO:0000255
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000544602-4957_100283533.0Coiled coilOntology_term=ECO:0000255
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000311540-4957_100283533.0Coiled coilOntology_term=ECO:0000255
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000332246-51057_100283533.0Coiled coilOntology_term=ECO:0000255
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000454498-51057_100283533.0Coiled coilOntology_term=ECO:0000255
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000522854-3857_100283533.0Coiled coilOntology_term=ECO:0000255
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000544602-4957_100283533.0Coiled coilOntology_term=ECO:0000255
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000311540-491_14283533.0Topological domainCytoplasmic
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000332246-5101_14283533.0Topological domainCytoplasmic
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000454498-5101_14283533.0Topological domainCytoplasmic
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000522854-381_14283533.0Topological domainCytoplasmic
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000544602-491_14283533.0Topological domainCytoplasmic
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000311540-491_14283533.0Topological domainCytoplasmic
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000332246-5101_14283533.0Topological domainCytoplasmic
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000454498-5101_14283533.0Topological domainCytoplasmic
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000522854-381_14283533.0Topological domainCytoplasmic
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000544602-491_14283533.0Topological domainCytoplasmic
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000311540-4915_35283533.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000332246-51015_35283533.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000454498-51015_35283533.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000522854-3815_35283533.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000544602-4915_35283533.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000311540-4915_35283533.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000332246-51015_35283533.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000454498-51015_35283533.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000522854-3815_35283533.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000544602-4915_35283533.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000030635347130_14079219.0Topological domainExtracellular
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000030635347162_17879219.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000030635347200_21179219.0Topological domainExtracellular
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000030635347233_27179219.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315936chr2:85826825ENST000003063534797_10879219.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000033446258130_140132272.0Topological domainExtracellular
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000033446258162_178132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000033446258200_211132272.0Topological domainExtracellular
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000033446258233_271132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000040966847130_140132272.0Topological domainExtracellular
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000040966847162_178132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000040966847200_211132272.0Topological domainExtracellular
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000040966847233_271132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000030635347130_14079219.0Topological domainExtracellular
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000030635347162_17879219.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000030635347200_21179219.0Topological domainExtracellular
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000030635347233_27179219.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315937chr2:85826825ENST000003063534797_10879219.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000033446258130_140132272.0Topological domainExtracellular
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000033446258162_178132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000033446258200_211132272.0Topological domainExtracellular
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000033446258233_271132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000040966847130_140132272.0Topological domainExtracellular
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000040966847162_178132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000040966847200_211132272.0Topological domainExtracellular
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000040966847233_271132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000030635347109_12979219.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000030635347141_16179219.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000030635347179_19979219.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000030635347212_23279219.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST000003063534776_9679219.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000033446258141_161132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000033446258179_199132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000033446258212_232132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000040966847141_161132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000040966847179_199132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000040966847212_232132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000030635347109_12979219.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000030635347141_16179219.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000030635347179_19979219.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000030635347212_23279219.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST000003063534776_9679219.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000033446258141_161132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000033446258179_199132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000033446258212_232132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000040966847141_161132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000040966847179_199132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000040966847212_232132272.0TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000311540-4936_532283533.0Topological domainLumenal
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000332246-51036_532283533.0Topological domainLumenal
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000454498-51036_532283533.0Topological domainLumenal
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000522854-3836_532283533.0Topological domainLumenal
HgeneCSGALNACT1chr8:19315936chr2:85826825ENST00000544602-4936_532283533.0Topological domainLumenal
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000311540-4936_532283533.0Topological domainLumenal
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000332246-51036_532283533.0Topological domainLumenal
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000454498-51036_532283533.0Topological domainLumenal
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000522854-3836_532283533.0Topological domainLumenal
HgeneCSGALNACT1chr8:19315937chr2:85826825ENST00000544602-4936_532283533.0Topological domainLumenal
TgeneTMEM150Achr8:19315936chr2:85826825ENST00000306353471_279219.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315936chr2:85826825ENST000003063534724_7579219.0Topological domainExtracellular
TgeneTMEM150Achr8:19315936chr2:85826825ENST00000334462581_2132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315936chr2:85826825ENST000003344625824_75132272.0Topological domainExtracellular
TgeneTMEM150Achr8:19315936chr2:85826825ENST000003344625897_108132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315936chr2:85826825ENST00000409668471_2132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315936chr2:85826825ENST000004096684724_75132272.0Topological domainExtracellular
TgeneTMEM150Achr8:19315936chr2:85826825ENST000004096684797_108132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315937chr2:85826825ENST00000306353471_279219.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315937chr2:85826825ENST000003063534724_7579219.0Topological domainExtracellular
TgeneTMEM150Achr8:19315937chr2:85826825ENST00000334462581_2132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315937chr2:85826825ENST000003344625824_75132272.0Topological domainExtracellular
TgeneTMEM150Achr8:19315937chr2:85826825ENST000003344625897_108132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315937chr2:85826825ENST00000409668471_2132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315937chr2:85826825ENST000004096684724_75132272.0Topological domainExtracellular
TgeneTMEM150Achr8:19315937chr2:85826825ENST000004096684797_108132272.0Topological domainCytoplasmic
TgeneTMEM150Achr8:19315936chr2:85826825ENST00000306353473_2379219.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000033446258109_129132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST00000334462583_23132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST000003344625876_96132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST0000040966847109_129132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST00000409668473_23132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315936chr2:85826825ENST000004096684776_96132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST00000306353473_2379219.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000033446258109_129132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST00000334462583_23132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST000003344625876_96132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST0000040966847109_129132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST00000409668473_23132272.0TransmembraneHelical
TgeneTMEM150Achr8:19315937chr2:85826825ENST000004096684776_96132272.0TransmembraneHelical


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Fusion Gene Sequence for CSGALNACT1-TMEM150A


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>19699_19699_1_CSGALNACT1-TMEM150A_CSGALNACT1_chr8_19315936_ENST00000544602_TMEM150A_chr2_85826825_ENST00000306353_length(transcript)=2212nt_BP=1264nt
ACAGGGGTTCCTGACCTTCGCTCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCACCT
CCTAACCTTCCCTTCTTGAACCCCCAGGTCCCCTCTTGCTGTTGGCTGCACATCAGGAAGGCTGTGATGGGAATGAAGGTGAAAACTTGG
AGATTTCACTTCAGTCATTGCTTCTGCCTGCAAGATCATCCTTTAAAAGTAGAGAAGCTGCTCTGTGTGGTGGTTAACTCCAAGAGGCAG
AACTCGTTCTAGAAGGAAATGGATGCAAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTGTGGTCTAGCCCAGGGAAGCCCTTCCGTGG
GGGCCCCGGCTTTGAGGGATGCCACCGGTTCTGGACGCATGGCTGATTCCTGAATGATGATGGTTCGCCGGGGGCTGCTTGCGTGGATTT
CCCGGGTGGTGGTTTTGCTGGTGCTCCTCTGCTGTGCTATCTCTGTCCTGTACATGTTGGCCTGCACCCCAAAAGGTGACGAGGAGCAGC
TGGCACTGCCCAGGGCCAACAGCCCCACGGGGAAGGAGGGGTACCAGGCCGTCCTTCAGGAGTGGGAGGAGCAGCACCGCAACTACGTGA
GCAGCCTGAAGCGGCAGATCGCACAGCTCAAGGAGGAGCTGCAGGAGAGGAGTGAGCAGCTCAGGAATGGGCAGTACCAAGCCAGCGATG
CTGCTGGCCTGGGTCTGGACAGGAGCCCCCCAGAGAAAACCCAGGCCGACCTCCTGGCCTTCCTGCACTCGCAGGTGGACAAGGCAGAGG
TGAATGCTGGCGTCAAGCTGGCCACAGAGTATGCAGCAGTGCCTTTCGATAGCTTTACTCTACAGAAGGTGTACCAGCTGGAGACTGGCC
TTACCCGCCACCCCGAGGAGAAGCCTGTGAGGAAGGACAAGCGGGATGAGTTGGTGGAAGCCATTGAATCAGCCTTGGAGACCCTGAACA
GTCCTGCAGAGAACAGCCCCAATCACCGTCCTTACACGGCCTCTGATTTCATAGAAGGGATCTACCGAACAGAAAGGGACAAAGGGACAT
TGTATGAGCTCACCTTCAAAGGGGACCACAAACACGAATTCAAACGGCTCATCTTATTTCGACCATTCGGCCCCATCATGAAAGTGAAAA
ATGAAAAGCTCAACATGGCCAACACGCTTATCAATGTTATCGTGCCTCTAGCAAAAAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATT
TCAGGTGGATCATGCCAGGTCTCTGCACTACGTTGGAGCTGGCGTGGCCTTCCCTGCGGGGCTGCTCTTTGTTTGCCTGCACTGTGCTCT
CTCCTACCAAGGGGCCACCGCCCCGCTGGACCTGGCTGTGGCCTATCTGCGAAGTGTGCTGGCTGTCATCGCCTTTATCACCCTGGTCCT
CAGTGGAGTCTTCTTTGTCCATGAGAGTTCTCAGCTGCAACATGGGGCAGCCCTGTGTGAGTGGGTGTGTGTCATCGATATCCTCATTTT
CTATGGCACCTTCAGCTACGAGTTTGGGGCAGTCTCCTCAGACACACTGGTGGCTGCACTGCAGCCTACCCCTGGCCGGGCCTGCAAGTC
CTCCGGGAGCAGCAGCACCTCCACCCACCTCAACTGTGCCCCCGAGAGCATCGCTATGATCTAAGGTCTGGGGAGGGTGGCTGGCCCGGC
CTCCACAGCACCCCACCCCATATCTTCTTTCCATTTATTTCGTACCAAAAACAATTTTGAGAAAGTATTCTGTTGGGATCTGGGCTTCCT
CACTTCTGGAGAAGTGGCCATCCCATGCCCACCTGTGCCATGGAGGAGTGGGCCCTGCCAGCTGCCACAGCTGCATGACCTGCTTCCCCA
CCCCACGGTGTCGTTTTGTTTTTAAAGGTCACCTGTCCTCACTCACCCAGCCAGCCCTTCAGGTGCCTTCTACTCCCAGTGCCAAAGCCA
GACCACTGGGGTTTCCTGCTGCAGGAATTGGGGGCTGGGAACAGCAGAGGGGATAGAAGTCTGGTGGAGGTGGAGTGGGCACGCCTTAGC
CTACGGAAAGGCCCATTTCTGGGCCCACTGAGCTGCACTGGGATTCTTCACTCTGCCCCTCACTTCCTTTAGGGCAAATAACACAGCAGA

>19699_19699_1_CSGALNACT1-TMEM150A_CSGALNACT1_chr8_19315936_ENST00000544602_TMEM150A_chr2_85826825_ENST00000306353_length(amino acids)=421AA_BP=283
MMMVRRGLLAWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERS
EQLRNGQYQASDAAGLGLDRSPPEKTQADLLAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDEL
VEAIESALETLNSPAENSPNHRPYTASDFIEGIYRTERDKGTLYELTFKGDHKHEFKRLILFRPFGPIMKVKNEKLNMANTLINVIVPLA
KRVDKFRQFMQNFRWIMPGLCTTLELAWPSLRGCSLFACTVLSPTKGPPPRWTWLWPICEVCWLSSPLSPWSSVESSLSMRVLSCNMGQP

--------------------------------------------------------------
>19699_19699_2_CSGALNACT1-TMEM150A_CSGALNACT1_chr8_19315936_ENST00000544602_TMEM150A_chr2_85826825_ENST00000334462_length(transcript)=2198nt_BP=1264nt
ACAGGGGTTCCTGACCTTCGCTCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCACCT
CCTAACCTTCCCTTCTTGAACCCCCAGGTCCCCTCTTGCTGTTGGCTGCACATCAGGAAGGCTGTGATGGGAATGAAGGTGAAAACTTGG
AGATTTCACTTCAGTCATTGCTTCTGCCTGCAAGATCATCCTTTAAAAGTAGAGAAGCTGCTCTGTGTGGTGGTTAACTCCAAGAGGCAG
AACTCGTTCTAGAAGGAAATGGATGCAAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTGTGGTCTAGCCCAGGGAAGCCCTTCCGTGG
GGGCCCCGGCTTTGAGGGATGCCACCGGTTCTGGACGCATGGCTGATTCCTGAATGATGATGGTTCGCCGGGGGCTGCTTGCGTGGATTT
CCCGGGTGGTGGTTTTGCTGGTGCTCCTCTGCTGTGCTATCTCTGTCCTGTACATGTTGGCCTGCACCCCAAAAGGTGACGAGGAGCAGC
TGGCACTGCCCAGGGCCAACAGCCCCACGGGGAAGGAGGGGTACCAGGCCGTCCTTCAGGAGTGGGAGGAGCAGCACCGCAACTACGTGA
GCAGCCTGAAGCGGCAGATCGCACAGCTCAAGGAGGAGCTGCAGGAGAGGAGTGAGCAGCTCAGGAATGGGCAGTACCAAGCCAGCGATG
CTGCTGGCCTGGGTCTGGACAGGAGCCCCCCAGAGAAAACCCAGGCCGACCTCCTGGCCTTCCTGCACTCGCAGGTGGACAAGGCAGAGG
TGAATGCTGGCGTCAAGCTGGCCACAGAGTATGCAGCAGTGCCTTTCGATAGCTTTACTCTACAGAAGGTGTACCAGCTGGAGACTGGCC
TTACCCGCCACCCCGAGGAGAAGCCTGTGAGGAAGGACAAGCGGGATGAGTTGGTGGAAGCCATTGAATCAGCCTTGGAGACCCTGAACA
GTCCTGCAGAGAACAGCCCCAATCACCGTCCTTACACGGCCTCTGATTTCATAGAAGGGATCTACCGAACAGAAAGGGACAAAGGGACAT
TGTATGAGCTCACCTTCAAAGGGGACCACAAACACGAATTCAAACGGCTCATCTTATTTCGACCATTCGGCCCCATCATGAAAGTGAAAA
ATGAAAAGCTCAACATGGCCAACACGCTTATCAATGTTATCGTGCCTCTAGCAAAAAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATT
TCAGGTGGATCATGCCAGGTCTCTGCACTACGTTGGAGCTGGCGTGGCCTTCCCTGCGGGGCTGCTCTTTGTTTGCCTGCACTGTGCTCT
CTCCTACCAAGGGGCCACCGCCCCGCTGGACCTGGCTGTGGCCTATCTGCGAAGTGTGCTGGCTGTCATCGCCTTTATCACCCTGGTCCT
CAGTGGAGTCTTCTTTGTCCATGAGAGTTCTCAGCTGCAACATGGGGCAGCCCTGTGTGAGTGGGTGTGTGTCATCGATATCCTCATTTT
CTATGGCACCTTCAGCTACGAGTTTGGGGCAGTCTCCTCAGACACACTGGTGGCTGCACTGCAGCCTACCCCTGGCCGGGCCTGCAAGTC
CTCCGGGAGCAGCAGCACCTCCACCCACCTCAACTGTGCCCCCGAGAGCATCGCTATGATCTAAGGTCTGGGGAGGGTGGCTGGCCCGGC
CTCCACAGCACCCCACCCCATATCTTCTTTCCATTTATTTCGTACCAAAAACAATTTTGAGAAAGTATTCTGTTGGGATCTGGGCTTCCT
CACTTCTGGAGAAGTGGCCATCCCATGCCCACCTGTGCCATGGAGGAGTGGGCCCTGCCAGCTGCCACAGCTGCATGACCTGCTTCCCCA
CCCCACGGTGTCGTTTTGTTTTTAAAGGTCACCTGTCCTCACTCACCCAGCCAGCCCTTCAGGTGCCTTCTACTCCCAGTGCCAAAGCCA
GACCACTGGGGTTTCCTGCTGCAGGAATTGGGGGCTGGGAACAGCAGAGGGGATAGAAGTCTGGTGGAGGTGGAGTGGGCACGCCTTAGC
CTACGGAAAGGCCCATTTCTGGGCCCACTGAGCTGCACTGGGATTCTTCACTCTGCCCCTCACTTCCTTTAGGGCAAATAACACAGCAGA

>19699_19699_2_CSGALNACT1-TMEM150A_CSGALNACT1_chr8_19315936_ENST00000544602_TMEM150A_chr2_85826825_ENST00000334462_length(amino acids)=421AA_BP=283
MMMVRRGLLAWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERS
EQLRNGQYQASDAAGLGLDRSPPEKTQADLLAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDEL
VEAIESALETLNSPAENSPNHRPYTASDFIEGIYRTERDKGTLYELTFKGDHKHEFKRLILFRPFGPIMKVKNEKLNMANTLINVIVPLA
KRVDKFRQFMQNFRWIMPGLCTTLELAWPSLRGCSLFACTVLSPTKGPPPRWTWLWPICEVCWLSSPLSPWSSVESSLSMRVLSCNMGQP

--------------------------------------------------------------
>19699_19699_3_CSGALNACT1-TMEM150A_CSGALNACT1_chr8_19315936_ENST00000544602_TMEM150A_chr2_85826825_ENST00000409668_length(transcript)=2176nt_BP=1264nt
ACAGGGGTTCCTGACCTTCGCTCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCACCT
CCTAACCTTCCCTTCTTGAACCCCCAGGTCCCCTCTTGCTGTTGGCTGCACATCAGGAAGGCTGTGATGGGAATGAAGGTGAAAACTTGG
AGATTTCACTTCAGTCATTGCTTCTGCCTGCAAGATCATCCTTTAAAAGTAGAGAAGCTGCTCTGTGTGGTGGTTAACTCCAAGAGGCAG
AACTCGTTCTAGAAGGAAATGGATGCAAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTGTGGTCTAGCCCAGGGAAGCCCTTCCGTGG
GGGCCCCGGCTTTGAGGGATGCCACCGGTTCTGGACGCATGGCTGATTCCTGAATGATGATGGTTCGCCGGGGGCTGCTTGCGTGGATTT
CCCGGGTGGTGGTTTTGCTGGTGCTCCTCTGCTGTGCTATCTCTGTCCTGTACATGTTGGCCTGCACCCCAAAAGGTGACGAGGAGCAGC
TGGCACTGCCCAGGGCCAACAGCCCCACGGGGAAGGAGGGGTACCAGGCCGTCCTTCAGGAGTGGGAGGAGCAGCACCGCAACTACGTGA
GCAGCCTGAAGCGGCAGATCGCACAGCTCAAGGAGGAGCTGCAGGAGAGGAGTGAGCAGCTCAGGAATGGGCAGTACCAAGCCAGCGATG
CTGCTGGCCTGGGTCTGGACAGGAGCCCCCCAGAGAAAACCCAGGCCGACCTCCTGGCCTTCCTGCACTCGCAGGTGGACAAGGCAGAGG
TGAATGCTGGCGTCAAGCTGGCCACAGAGTATGCAGCAGTGCCTTTCGATAGCTTTACTCTACAGAAGGTGTACCAGCTGGAGACTGGCC
TTACCCGCCACCCCGAGGAGAAGCCTGTGAGGAAGGACAAGCGGGATGAGTTGGTGGAAGCCATTGAATCAGCCTTGGAGACCCTGAACA
GTCCTGCAGAGAACAGCCCCAATCACCGTCCTTACACGGCCTCTGATTTCATAGAAGGGATCTACCGAACAGAAAGGGACAAAGGGACAT
TGTATGAGCTCACCTTCAAAGGGGACCACAAACACGAATTCAAACGGCTCATCTTATTTCGACCATTCGGCCCCATCATGAAAGTGAAAA
ATGAAAAGCTCAACATGGCCAACACGCTTATCAATGTTATCGTGCCTCTAGCAAAAAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATT
TCAGGTGGATCATGCCAGGTCTCTGCACTACGTTGGAGCTGGCGTGGCCTTCCCTGCGGGGCTGCTCTTTGTTTGCCTGCACTGTGCTCT
CTCCTACCAAGGGGCCACCGCCCCGCTGGACCTGGCTGTGGCCTATCTGCGAAGTGTGCTGGCTGTCATCGCCTTTATCACCCTGGTCCT
CAGTGGAGTCTTCTTTGTCCATGAGAGTTCTCAGCTGCAACATGGGGCAGCCCTGTGTGAGTGGGTGTGTGTCATCGATATCCTCATTTT
CTATGGCACCTTCAGCTACGAGTTTGGGGCAGTCTCCTCAGACACACTGGTGGCTGCACTGCAGCCTACCCCTGGCCGGGCCTGCAAGTC
CTCCGGGAGCAGCAGCACCTCCACCCACCTCAACTGTGCCCCCGAGAGCATCGCTATGATCTAAGGTCTGGGGAGGGTGGCTGGCCCGGC
CTCCACAGCACCCCACCCCATATCTTCTTTCCATTTATTTCGTACCAAAAACAATTTTGAGAAAGTATTCTGTTGGGATCTGGGCTTCCT
CACTTCTGGAGAAGTGGCCATCCCATGCCCACCTGTGCCATGGAGGAGTGGGCCCTGCCAGCTGCCACAGCTGCATGACCTGCTTCCCCA
CCCCACGGTGTCGTTTTGTTTTTAAAGGTCACCTGTCCTCACTCACCCAGCCAGCCCTTCAGGTGCCTTCTACTCCCAGTGCCAAAGCCA
GACCACTGGGGTTTCCTGCTGCAGGAATTGGGGGCTGGGAACAGCAGAGGGGATAGAAGTCTGGTGGAGGTGGAGTGGGCACGCCTTAGC
CTACGGAAAGGCCCATTTCTGGGCCCACTGAGCTGCACTGGGATTCTTCACTCTGCCCCTCACTTCCTTTAGGGCAAATAACACAGCAGA

>19699_19699_3_CSGALNACT1-TMEM150A_CSGALNACT1_chr8_19315936_ENST00000544602_TMEM150A_chr2_85826825_ENST00000409668_length(amino acids)=421AA_BP=283
MMMVRRGLLAWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERS
EQLRNGQYQASDAAGLGLDRSPPEKTQADLLAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDEL
VEAIESALETLNSPAENSPNHRPYTASDFIEGIYRTERDKGTLYELTFKGDHKHEFKRLILFRPFGPIMKVKNEKLNMANTLINVIVPLA
KRVDKFRQFMQNFRWIMPGLCTTLELAWPSLRGCSLFACTVLSPTKGPPPRWTWLWPICEVCWLSSPLSPWSSVESSLSMRVLSCNMGQP

--------------------------------------------------------------
>19699_19699_4_CSGALNACT1-TMEM150A_CSGALNACT1_chr8_19315937_ENST00000544602_TMEM150A_chr2_85826825_ENST00000306353_length(transcript)=2212nt_BP=1264nt
ACAGGGGTTCCTGACCTTCGCTCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCACCT
CCTAACCTTCCCTTCTTGAACCCCCAGGTCCCCTCTTGCTGTTGGCTGCACATCAGGAAGGCTGTGATGGGAATGAAGGTGAAAACTTGG
AGATTTCACTTCAGTCATTGCTTCTGCCTGCAAGATCATCCTTTAAAAGTAGAGAAGCTGCTCTGTGTGGTGGTTAACTCCAAGAGGCAG
AACTCGTTCTAGAAGGAAATGGATGCAAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTGTGGTCTAGCCCAGGGAAGCCCTTCCGTGG
GGGCCCCGGCTTTGAGGGATGCCACCGGTTCTGGACGCATGGCTGATTCCTGAATGATGATGGTTCGCCGGGGGCTGCTTGCGTGGATTT
CCCGGGTGGTGGTTTTGCTGGTGCTCCTCTGCTGTGCTATCTCTGTCCTGTACATGTTGGCCTGCACCCCAAAAGGTGACGAGGAGCAGC
TGGCACTGCCCAGGGCCAACAGCCCCACGGGGAAGGAGGGGTACCAGGCCGTCCTTCAGGAGTGGGAGGAGCAGCACCGCAACTACGTGA
GCAGCCTGAAGCGGCAGATCGCACAGCTCAAGGAGGAGCTGCAGGAGAGGAGTGAGCAGCTCAGGAATGGGCAGTACCAAGCCAGCGATG
CTGCTGGCCTGGGTCTGGACAGGAGCCCCCCAGAGAAAACCCAGGCCGACCTCCTGGCCTTCCTGCACTCGCAGGTGGACAAGGCAGAGG
TGAATGCTGGCGTCAAGCTGGCCACAGAGTATGCAGCAGTGCCTTTCGATAGCTTTACTCTACAGAAGGTGTACCAGCTGGAGACTGGCC
TTACCCGCCACCCCGAGGAGAAGCCTGTGAGGAAGGACAAGCGGGATGAGTTGGTGGAAGCCATTGAATCAGCCTTGGAGACCCTGAACA
GTCCTGCAGAGAACAGCCCCAATCACCGTCCTTACACGGCCTCTGATTTCATAGAAGGGATCTACCGAACAGAAAGGGACAAAGGGACAT
TGTATGAGCTCACCTTCAAAGGGGACCACAAACACGAATTCAAACGGCTCATCTTATTTCGACCATTCGGCCCCATCATGAAAGTGAAAA
ATGAAAAGCTCAACATGGCCAACACGCTTATCAATGTTATCGTGCCTCTAGCAAAAAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATT
TCAGGTGGATCATGCCAGGTCTCTGCACTACGTTGGAGCTGGCGTGGCCTTCCCTGCGGGGCTGCTCTTTGTTTGCCTGCACTGTGCTCT
CTCCTACCAAGGGGCCACCGCCCCGCTGGACCTGGCTGTGGCCTATCTGCGAAGTGTGCTGGCTGTCATCGCCTTTATCACCCTGGTCCT
CAGTGGAGTCTTCTTTGTCCATGAGAGTTCTCAGCTGCAACATGGGGCAGCCCTGTGTGAGTGGGTGTGTGTCATCGATATCCTCATTTT
CTATGGCACCTTCAGCTACGAGTTTGGGGCAGTCTCCTCAGACACACTGGTGGCTGCACTGCAGCCTACCCCTGGCCGGGCCTGCAAGTC
CTCCGGGAGCAGCAGCACCTCCACCCACCTCAACTGTGCCCCCGAGAGCATCGCTATGATCTAAGGTCTGGGGAGGGTGGCTGGCCCGGC
CTCCACAGCACCCCACCCCATATCTTCTTTCCATTTATTTCGTACCAAAAACAATTTTGAGAAAGTATTCTGTTGGGATCTGGGCTTCCT
CACTTCTGGAGAAGTGGCCATCCCATGCCCACCTGTGCCATGGAGGAGTGGGCCCTGCCAGCTGCCACAGCTGCATGACCTGCTTCCCCA
CCCCACGGTGTCGTTTTGTTTTTAAAGGTCACCTGTCCTCACTCACCCAGCCAGCCCTTCAGGTGCCTTCTACTCCCAGTGCCAAAGCCA
GACCACTGGGGTTTCCTGCTGCAGGAATTGGGGGCTGGGAACAGCAGAGGGGATAGAAGTCTGGTGGAGGTGGAGTGGGCACGCCTTAGC
CTACGGAAAGGCCCATTTCTGGGCCCACTGAGCTGCACTGGGATTCTTCACTCTGCCCCTCACTTCCTTTAGGGCAAATAACACAGCAGA

>19699_19699_4_CSGALNACT1-TMEM150A_CSGALNACT1_chr8_19315937_ENST00000544602_TMEM150A_chr2_85826825_ENST00000306353_length(amino acids)=421AA_BP=283
MMMVRRGLLAWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERS
EQLRNGQYQASDAAGLGLDRSPPEKTQADLLAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDEL
VEAIESALETLNSPAENSPNHRPYTASDFIEGIYRTERDKGTLYELTFKGDHKHEFKRLILFRPFGPIMKVKNEKLNMANTLINVIVPLA
KRVDKFRQFMQNFRWIMPGLCTTLELAWPSLRGCSLFACTVLSPTKGPPPRWTWLWPICEVCWLSSPLSPWSSVESSLSMRVLSCNMGQP

--------------------------------------------------------------
>19699_19699_5_CSGALNACT1-TMEM150A_CSGALNACT1_chr8_19315937_ENST00000544602_TMEM150A_chr2_85826825_ENST00000334462_length(transcript)=2198nt_BP=1264nt
ACAGGGGTTCCTGACCTTCGCTCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCACCT
CCTAACCTTCCCTTCTTGAACCCCCAGGTCCCCTCTTGCTGTTGGCTGCACATCAGGAAGGCTGTGATGGGAATGAAGGTGAAAACTTGG
AGATTTCACTTCAGTCATTGCTTCTGCCTGCAAGATCATCCTTTAAAAGTAGAGAAGCTGCTCTGTGTGGTGGTTAACTCCAAGAGGCAG
AACTCGTTCTAGAAGGAAATGGATGCAAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTGTGGTCTAGCCCAGGGAAGCCCTTCCGTGG
GGGCCCCGGCTTTGAGGGATGCCACCGGTTCTGGACGCATGGCTGATTCCTGAATGATGATGGTTCGCCGGGGGCTGCTTGCGTGGATTT
CCCGGGTGGTGGTTTTGCTGGTGCTCCTCTGCTGTGCTATCTCTGTCCTGTACATGTTGGCCTGCACCCCAAAAGGTGACGAGGAGCAGC
TGGCACTGCCCAGGGCCAACAGCCCCACGGGGAAGGAGGGGTACCAGGCCGTCCTTCAGGAGTGGGAGGAGCAGCACCGCAACTACGTGA
GCAGCCTGAAGCGGCAGATCGCACAGCTCAAGGAGGAGCTGCAGGAGAGGAGTGAGCAGCTCAGGAATGGGCAGTACCAAGCCAGCGATG
CTGCTGGCCTGGGTCTGGACAGGAGCCCCCCAGAGAAAACCCAGGCCGACCTCCTGGCCTTCCTGCACTCGCAGGTGGACAAGGCAGAGG
TGAATGCTGGCGTCAAGCTGGCCACAGAGTATGCAGCAGTGCCTTTCGATAGCTTTACTCTACAGAAGGTGTACCAGCTGGAGACTGGCC
TTACCCGCCACCCCGAGGAGAAGCCTGTGAGGAAGGACAAGCGGGATGAGTTGGTGGAAGCCATTGAATCAGCCTTGGAGACCCTGAACA
GTCCTGCAGAGAACAGCCCCAATCACCGTCCTTACACGGCCTCTGATTTCATAGAAGGGATCTACCGAACAGAAAGGGACAAAGGGACAT
TGTATGAGCTCACCTTCAAAGGGGACCACAAACACGAATTCAAACGGCTCATCTTATTTCGACCATTCGGCCCCATCATGAAAGTGAAAA
ATGAAAAGCTCAACATGGCCAACACGCTTATCAATGTTATCGTGCCTCTAGCAAAAAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATT
TCAGGTGGATCATGCCAGGTCTCTGCACTACGTTGGAGCTGGCGTGGCCTTCCCTGCGGGGCTGCTCTTTGTTTGCCTGCACTGTGCTCT
CTCCTACCAAGGGGCCACCGCCCCGCTGGACCTGGCTGTGGCCTATCTGCGAAGTGTGCTGGCTGTCATCGCCTTTATCACCCTGGTCCT
CAGTGGAGTCTTCTTTGTCCATGAGAGTTCTCAGCTGCAACATGGGGCAGCCCTGTGTGAGTGGGTGTGTGTCATCGATATCCTCATTTT
CTATGGCACCTTCAGCTACGAGTTTGGGGCAGTCTCCTCAGACACACTGGTGGCTGCACTGCAGCCTACCCCTGGCCGGGCCTGCAAGTC
CTCCGGGAGCAGCAGCACCTCCACCCACCTCAACTGTGCCCCCGAGAGCATCGCTATGATCTAAGGTCTGGGGAGGGTGGCTGGCCCGGC
CTCCACAGCACCCCACCCCATATCTTCTTTCCATTTATTTCGTACCAAAAACAATTTTGAGAAAGTATTCTGTTGGGATCTGGGCTTCCT
CACTTCTGGAGAAGTGGCCATCCCATGCCCACCTGTGCCATGGAGGAGTGGGCCCTGCCAGCTGCCACAGCTGCATGACCTGCTTCCCCA
CCCCACGGTGTCGTTTTGTTTTTAAAGGTCACCTGTCCTCACTCACCCAGCCAGCCCTTCAGGTGCCTTCTACTCCCAGTGCCAAAGCCA
GACCACTGGGGTTTCCTGCTGCAGGAATTGGGGGCTGGGAACAGCAGAGGGGATAGAAGTCTGGTGGAGGTGGAGTGGGCACGCCTTAGC
CTACGGAAAGGCCCATTTCTGGGCCCACTGAGCTGCACTGGGATTCTTCACTCTGCCCCTCACTTCCTTTAGGGCAAATAACACAGCAGA

>19699_19699_5_CSGALNACT1-TMEM150A_CSGALNACT1_chr8_19315937_ENST00000544602_TMEM150A_chr2_85826825_ENST00000334462_length(amino acids)=421AA_BP=283
MMMVRRGLLAWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERS
EQLRNGQYQASDAAGLGLDRSPPEKTQADLLAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDEL
VEAIESALETLNSPAENSPNHRPYTASDFIEGIYRTERDKGTLYELTFKGDHKHEFKRLILFRPFGPIMKVKNEKLNMANTLINVIVPLA
KRVDKFRQFMQNFRWIMPGLCTTLELAWPSLRGCSLFACTVLSPTKGPPPRWTWLWPICEVCWLSSPLSPWSSVESSLSMRVLSCNMGQP

--------------------------------------------------------------
>19699_19699_6_CSGALNACT1-TMEM150A_CSGALNACT1_chr8_19315937_ENST00000544602_TMEM150A_chr2_85826825_ENST00000409668_length(transcript)=2176nt_BP=1264nt
ACAGGGGTTCCTGACCTTCGCTCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCACCT
CCTAACCTTCCCTTCTTGAACCCCCAGGTCCCCTCTTGCTGTTGGCTGCACATCAGGAAGGCTGTGATGGGAATGAAGGTGAAAACTTGG
AGATTTCACTTCAGTCATTGCTTCTGCCTGCAAGATCATCCTTTAAAAGTAGAGAAGCTGCTCTGTGTGGTGGTTAACTCCAAGAGGCAG
AACTCGTTCTAGAAGGAAATGGATGCAAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTGTGGTCTAGCCCAGGGAAGCCCTTCCGTGG
GGGCCCCGGCTTTGAGGGATGCCACCGGTTCTGGACGCATGGCTGATTCCTGAATGATGATGGTTCGCCGGGGGCTGCTTGCGTGGATTT
CCCGGGTGGTGGTTTTGCTGGTGCTCCTCTGCTGTGCTATCTCTGTCCTGTACATGTTGGCCTGCACCCCAAAAGGTGACGAGGAGCAGC
TGGCACTGCCCAGGGCCAACAGCCCCACGGGGAAGGAGGGGTACCAGGCCGTCCTTCAGGAGTGGGAGGAGCAGCACCGCAACTACGTGA
GCAGCCTGAAGCGGCAGATCGCACAGCTCAAGGAGGAGCTGCAGGAGAGGAGTGAGCAGCTCAGGAATGGGCAGTACCAAGCCAGCGATG
CTGCTGGCCTGGGTCTGGACAGGAGCCCCCCAGAGAAAACCCAGGCCGACCTCCTGGCCTTCCTGCACTCGCAGGTGGACAAGGCAGAGG
TGAATGCTGGCGTCAAGCTGGCCACAGAGTATGCAGCAGTGCCTTTCGATAGCTTTACTCTACAGAAGGTGTACCAGCTGGAGACTGGCC
TTACCCGCCACCCCGAGGAGAAGCCTGTGAGGAAGGACAAGCGGGATGAGTTGGTGGAAGCCATTGAATCAGCCTTGGAGACCCTGAACA
GTCCTGCAGAGAACAGCCCCAATCACCGTCCTTACACGGCCTCTGATTTCATAGAAGGGATCTACCGAACAGAAAGGGACAAAGGGACAT
TGTATGAGCTCACCTTCAAAGGGGACCACAAACACGAATTCAAACGGCTCATCTTATTTCGACCATTCGGCCCCATCATGAAAGTGAAAA
ATGAAAAGCTCAACATGGCCAACACGCTTATCAATGTTATCGTGCCTCTAGCAAAAAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATT
TCAGGTGGATCATGCCAGGTCTCTGCACTACGTTGGAGCTGGCGTGGCCTTCCCTGCGGGGCTGCTCTTTGTTTGCCTGCACTGTGCTCT
CTCCTACCAAGGGGCCACCGCCCCGCTGGACCTGGCTGTGGCCTATCTGCGAAGTGTGCTGGCTGTCATCGCCTTTATCACCCTGGTCCT
CAGTGGAGTCTTCTTTGTCCATGAGAGTTCTCAGCTGCAACATGGGGCAGCCCTGTGTGAGTGGGTGTGTGTCATCGATATCCTCATTTT
CTATGGCACCTTCAGCTACGAGTTTGGGGCAGTCTCCTCAGACACACTGGTGGCTGCACTGCAGCCTACCCCTGGCCGGGCCTGCAAGTC
CTCCGGGAGCAGCAGCACCTCCACCCACCTCAACTGTGCCCCCGAGAGCATCGCTATGATCTAAGGTCTGGGGAGGGTGGCTGGCCCGGC
CTCCACAGCACCCCACCCCATATCTTCTTTCCATTTATTTCGTACCAAAAACAATTTTGAGAAAGTATTCTGTTGGGATCTGGGCTTCCT
CACTTCTGGAGAAGTGGCCATCCCATGCCCACCTGTGCCATGGAGGAGTGGGCCCTGCCAGCTGCCACAGCTGCATGACCTGCTTCCCCA
CCCCACGGTGTCGTTTTGTTTTTAAAGGTCACCTGTCCTCACTCACCCAGCCAGCCCTTCAGGTGCCTTCTACTCCCAGTGCCAAAGCCA
GACCACTGGGGTTTCCTGCTGCAGGAATTGGGGGCTGGGAACAGCAGAGGGGATAGAAGTCTGGTGGAGGTGGAGTGGGCACGCCTTAGC
CTACGGAAAGGCCCATTTCTGGGCCCACTGAGCTGCACTGGGATTCTTCACTCTGCCCCTCACTTCCTTTAGGGCAAATAACACAGCAGA

>19699_19699_6_CSGALNACT1-TMEM150A_CSGALNACT1_chr8_19315937_ENST00000544602_TMEM150A_chr2_85826825_ENST00000409668_length(amino acids)=421AA_BP=283
MMMVRRGLLAWISRVVVLLVLLCCAISVLYMLACTPKGDEEQLALPRANSPTGKEGYQAVLQEWEEQHRNYVSSLKRQIAQLKEELQERS
EQLRNGQYQASDAAGLGLDRSPPEKTQADLLAFLHSQVDKAEVNAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDEL
VEAIESALETLNSPAENSPNHRPYTASDFIEGIYRTERDKGTLYELTFKGDHKHEFKRLILFRPFGPIMKVKNEKLNMANTLINVIVPLA
KRVDKFRQFMQNFRWIMPGLCTTLELAWPSLRGCSLFACTVLSPTKGPPPRWTWLWPICEVCWLSSPLSPWSSVESSLSMRVLSCNMGQP

--------------------------------------------------------------

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Fusion Gene PPI Analysis for CSGALNACT1-TMEM150A


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for CSGALNACT1-TMEM150A


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for CSGALNACT1-TMEM150A


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource