|
Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:DHCR24-TADA2B (FusionGDB2 ID:22523) |
Fusion Gene Summary for DHCR24-TADA2B |
Fusion gene summary |
Fusion gene information | Fusion gene name: DHCR24-TADA2B | Fusion gene ID: 22523 | Hgene | Tgene | Gene symbol | DHCR24 | TADA2B | Gene ID | 1718 | 93624 |
Gene name | 24-dehydrocholesterol reductase | transcriptional adaptor 2B | |
Synonyms | DCE|Nbla03646|SELADIN1|seladin-1 | ADA2(beta)|ADA2B | |
Cytomap | 1p32.3 | 4p16.1 | |
Type of gene | protein-coding | protein-coding | |
Description | delta(24)-sterol reductase3 beta-hydroxysterol delta 24-reductasedesmosterol-to-cholesterol enzymediminuto/dwarf1 homologseladin 1selective AD indicator 1 | transcriptional adapter 2-betaADA2-betaADA2-like protein betatranscriptional adaptor 2 (ADA2 homolog, yeast)-beta | |
Modification date | 20200320 | 20200313 | |
UniProtAcc | Q15392 | . | |
Ensembl transtripts involved in fusion gene | ENST00000371269, ENST00000535035, ENST00000537443, | ENST00000515646, ENST00000512388, ENST00000310074, | |
Fusion gene scores | * DoF score | 21 X 16 X 8=2688 | 3 X 3 X 2=18 |
# samples | 22 | 3 | |
** MAII score | log2(22/2688*10)=-3.6109577092541 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: DHCR24 [Title/Abstract] AND TADA2B [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | DHCR24(55330976)-TADA2B(7055789), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | DHCR24-TADA2B seems lost the major protein functional domain in Hgene partner, which is a cell metabolism gene due to the frame-shifted ORF. DHCR24-TADA2B seems lost the major protein functional domain in Tgene partner, which is a epigenetic factor due to the frame-shifted ORF. DHCR24-TADA2B seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | DHCR24 | GO:0043066 | negative regulation of apoptotic process | 15688385 |
Hgene | DHCR24 | GO:0043154 | negative regulation of cysteine-type endopeptidase activity involved in apoptotic process | 11007892 |
Fusion gene breakpoints across DHCR24 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across TADA2B (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUAD | TCGA-NJ-A4YF-01A | DHCR24 | chr1 | 55330976 | - | TADA2B | chr4 | 7055789 | + |
Top |
Fusion Gene ORF analysis for DHCR24-TADA2B |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000371269 | ENST00000515646 | DHCR24 | chr1 | 55330976 | - | TADA2B | chr4 | 7055789 | + |
5CDS-5UTR | ENST00000535035 | ENST00000515646 | DHCR24 | chr1 | 55330976 | - | TADA2B | chr4 | 7055789 | + |
Frame-shift | ENST00000371269 | ENST00000512388 | DHCR24 | chr1 | 55330976 | - | TADA2B | chr4 | 7055789 | + |
Frame-shift | ENST00000535035 | ENST00000512388 | DHCR24 | chr1 | 55330976 | - | TADA2B | chr4 | 7055789 | + |
In-frame | ENST00000371269 | ENST00000310074 | DHCR24 | chr1 | 55330976 | - | TADA2B | chr4 | 7055789 | + |
In-frame | ENST00000535035 | ENST00000310074 | DHCR24 | chr1 | 55330976 | - | TADA2B | chr4 | 7055789 | + |
intron-3CDS | ENST00000537443 | ENST00000310074 | DHCR24 | chr1 | 55330976 | - | TADA2B | chr4 | 7055789 | + |
intron-3CDS | ENST00000537443 | ENST00000512388 | DHCR24 | chr1 | 55330976 | - | TADA2B | chr4 | 7055789 | + |
intron-5UTR | ENST00000537443 | ENST00000515646 | DHCR24 | chr1 | 55330976 | - | TADA2B | chr4 | 7055789 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000371269 | DHCR24 | chr1 | 55330976 | - | ENST00000310074 | TADA2B | chr4 | 7055789 | + | 5010 | 1119 | 6 | 2111 | 701 |
ENST00000535035 | DHCR24 | chr1 | 55330976 | - | ENST00000310074 | TADA2B | chr4 | 7055789 | + | 4871 | 980 | 2 | 1972 | 656 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000371269 | ENST00000310074 | DHCR24 | chr1 | 55330976 | - | TADA2B | chr4 | 7055789 | + | 0.001833139 | 0.9981668 |
ENST00000535035 | ENST00000310074 | DHCR24 | chr1 | 55330976 | - | TADA2B | chr4 | 7055789 | + | 0.001151983 | 0.99884796 |
Top |
Fusion Genomic Features for DHCR24-TADA2B |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
DHCR24 | chr1 | 55330975 | - | TADA2B | chr4 | 7055788 | + | 3.89E-06 | 0.99999607 |
DHCR24 | chr1 | 55330975 | - | TADA2B | chr4 | 7055788 | + | 3.89E-06 | 0.99999607 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for DHCR24-TADA2B |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:55330976/chr4:7055789) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
DHCR24 | . |
FUNCTION: Catalyzes the reduction of the delta-24 double bond of sterol intermediates during cholesterol biosynthesis (PubMed:11519011, PubMed:21671375, PubMed:25637936, PubMed:22178193). In addition to its cholesterol-synthesizing activity, can protect cells from oxidative stress by reducing caspase 3 activity during apoptosis induced by oxidative stress (PubMed:11007892, PubMed:22010141). Also protects against amyloid-beta peptide-induced apoptosis (PubMed:11007892). {ECO:0000269|PubMed:11007892, ECO:0000269|PubMed:11519011, ECO:0000269|PubMed:21671375, ECO:0000269|PubMed:22010141, ECO:0000269|PubMed:22178193, ECO:0000269|PubMed:25637936}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | DHCR24 | chr1:55330976 | chr4:7055789 | ENST00000371269 | - | 6 | 9 | 58_234 | 340 | 517.0 | Domain | FAD-binding PCMH-type |
Hgene | DHCR24 | chr1:55330976 | chr4:7055789 | ENST00000371269 | - | 6 | 9 | 163_175 | 340 | 517.0 | Nucleotide binding | FAD |
Hgene | DHCR24 | chr1:55330976 | chr4:7055789 | ENST00000371269 | - | 6 | 9 | 23_31 | 340 | 517.0 | Topological domain | Lumenal |
Hgene | DHCR24 | chr1:55330976 | chr4:7055789 | ENST00000371269 | - | 6 | 9 | 32_52 | 340 | 517.0 | Transmembrane | Helical |
Tgene | TADA2B | chr1:55330976 | chr4:7055789 | ENST00000512388 | 0 | 2 | 65_118 | 15 | 346.0 | Domain | SANT | |
Tgene | TADA2B | chr1:55330976 | chr4:7055789 | ENST00000515646 | 0 | 1 | 65_118 | 0 | 329.0 | Domain | SANT | |
Tgene | TADA2B | chr1:55330976 | chr4:7055789 | ENST00000515646 | 0 | 1 | 3_49 | 0 | 329.0 | Zinc finger | ZZ-type |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | DHCR24 | chr1:55330976 | chr4:7055789 | ENST00000371269 | - | 6 | 9 | 53_516 | 340 | 517.0 | Topological domain | Cytoplasmic |
Tgene | TADA2B | chr1:55330976 | chr4:7055789 | ENST00000310074 | 0 | 2 | 65_118 | 90 | 421.0 | Domain | SANT | |
Tgene | TADA2B | chr1:55330976 | chr4:7055789 | ENST00000310074 | 0 | 2 | 3_49 | 90 | 421.0 | Zinc finger | ZZ-type | |
Tgene | TADA2B | chr1:55330976 | chr4:7055789 | ENST00000512388 | 0 | 2 | 3_49 | 15 | 346.0 | Zinc finger | ZZ-type |
Top |
Fusion Gene Sequence for DHCR24-TADA2B |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>22523_22523_1_DHCR24-TADA2B_DHCR24_chr1_55330976_ENST00000371269_TADA2B_chr4_7055789_ENST00000310074_length(transcript)=5010nt_BP=1119nt CCCGGGCTGTGGGCTACAGGCGCAGAGCGGGCCAGGCGCGGAGCTGGCGGCAGTGACAGGAGGCGCGAACCCGCAGCGCTTACCGCGCGG CGCCGCACCATGGAGCCCGCCGTGTCGCTGGCCGTGTGCGCGCTGCTCTTCCTGCTGTGGGTGCGCCTGAAGGGGCTGGAGTTCGTGCTC ATCCACCAGCGCTGGGTGTTCGTGTGCCTCTTCCTCCTGCCGCTCTCGCTTATCTTCGATATCTACTACTACGTGCGCGCCTGGGTGGTG TTCAAGCTCAGCAGCGCTCCGCGCCTGCACGAGCAGCGCGTGCGGGACATCCAGAAGCAGGTGCGGGAATGGAAGGAGCAGGGTAGCAAG ACCTTCATGTGCACGGGGCGCCCTGGCTGGCTCACTGTCTCACTACGTGTCGGGAAGTACAAGAAGACACACAAAAACATCATGATCAAC CTGATGGACATTCTGGAAGTGGACACCAAGAAACAGATTGTCCGTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACC TCCATTGGCTGGACTCTCCCCGTGTTGCCTGAGCTTGATGACCTCACAGTGGGGGGCTTGATCATGGGCACAGGCATCGAGTCATCATCC CACAAGTACGGCCTGTTCCAACACATCTGCACTGCTTACGAGCTGGTCCTGGCTGATGGCAGCTTTGTGCGATGCACTCCGTCCGAAAAC TCAGACCTGTTCTATGCCGTACCCTGGTCCTGTGGGACGCTGGGTTTCCTGGTGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGTAC GTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGCTATCTGTGCCAAGTTCACCCACGAGTCCCAGCGGCAGGAGAACCACTTCGTG GAAGGGCTGCTCTACTCCCTGGATGAGGCTGTCATTATGACAGGGGTCATGACAGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTGGC AATTACTACAAGCCGTGGTTCTTTAAGCATGTGGAGAACTATCTGAAGACAAACCGAGAGGGCCTGGAGTACATTCCCTTGAGACACTAC TACCACCGCCACACGCGCAGCATCTTCTGGGAGCTCCAGGAAGATATGGCTGCCCACGTTGGTGCTTCCCGGACTCCCCAAGAGGTGATG GAGCATTACGTGAGCATGTACATCCACGGGAACCTGGGGAAGGCCTGCATCCCCGACACCATCCCCAACCGCGTGACAGACCACACCTGT CCCAGCGGAGGCCCCCTCTCACCCAGCCTCACCACCCCGCTGCCCCCGCTGGACATCTCTGTGGCTGAGCAGCAGCAGCTGGGCTACATG CCGCTGCGGGATGATTACGAGATCGAGTATGACCAGGATGCCGAGACGCTCATCAGCGGGCTCTCTGTCAACTATGATGACGACGACGTG GAGATCGAGCTGAAGCGCGCCCACGTGGACATGTACGTGCGGAAGCTGAAAGAGAGACAGCGGCGGAAGAACATCGCCCGTGACTACAAT CTGGTGCCAGCCTTCCTGGGGAAGGACAAGAAGGAGAAGGAAAAGGCGCTGAAGCGCAAGATCACCAAGGAGGAGAAGGAGCTGCGCCTG AAGCTGAGGCCGCTGTACCAGTTCATGTCATGCAAGGAGTTTGATGACCTTTTTGAAAACATGCACAAAGAAAAAATGCTCCGGGCCAAG ATCCGAGAACTGCAGCGGTACCGGCGAAACGGGATCACCAAGATGGAAGAGTCGGCAGAGTACGAGGCAGCGCGGCATAAACGGGAGAAG AGGAAGGAGAACAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCGCCGCCATTGAGAACCTTCCAGGC TTCGAGCTCCTGTCAGATCGCGAGAAGGTGCTCTGCAGCTCTTTAAACTTGAGTCCAGCCCGCTACGTGACTGTGAAGACTATTATAATT AAAGACCACCTCCAGAAGCGGCAAGGAATCCCCTCCAAAAGCCGCCTTCCTAGCTACCTGGACAAAGTCCTAAAGAAAAGGATTTTGAAT TTCCTCACAGAAAGCGGCTGGATCTCCAGGGACGCGTCTTGAAGCTGAGACGCTTTGAAAGCCAGGGTGATGCTCAGACAGTGTGCCAGC CAAAATGACTTGGGGGAGGGGAGCCGCTTCCCCACTGTTGCTCTTTTTTAAACAAATTGAGTTCCTTTTTTTAAGATAGAAATTCTTTTC ATGGTCCTCTGAAAGAAGCAATAGTAACAATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCA TACACTGCGATGATGCTCCGCCTTTACCCGTTCAGTTGGGAGCTTATTGTGAGATTGGATCATTTCCTTTTGAGTGTTCTTCTCTTTGGT ACAAAAGCTATTGTGGGTGACAGGAGCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGACACAAGCTCTTCTCAGG CGGGGCTGCCTGCAGGCTCCCGTTTTCTGAGCCCACGCTGCCCACAGCTGACCCCAGCGCAGCCCCGGGCACGCGGCACTTTACATGGGG GCAGCTTGGGCCCAGACTCCTCCGCTGTGTAGCAGATGAGGAAAATCAGGCCAGAGGACAACAGGCTGGCGTTTTGTTGGGAACTGAAGA GGAATCTGTTGAACACAGCGACCAGATGACCTTCCATTTCACCGGCGGCAGCAGTTTCAGCGTGCAGTTCCCAAACCCCAAAGCTGACCC TGCGCCCCATTTGAATACGGCCAGAGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCC ACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGGCCCTCTCAGTCCATTTTCCGGGGCTGCTCGGTGCT GCTGTTAAGACGTGAGTGCATTTCACTTGGAAGAACCCATTGTACAAAGTTCAAGGCTAAGAGTTCTGAATTCTGGCGTCAGCTTCCTCA GGATTTTCTTCAGTTGCAAGTACCTTTCCACTGAAAATATGAGCATGCCCGCCTGGCTAGTAGGCATCTGTAAGAGTGTCGCCAGGCCCG CGCCAGCTGAGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGG TGCCCTGAGCCTCGAGCTGCTCTCTGTCACTGTCTTGAATCAGACTCAGAAATGGCTTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGG GGTCCTCTTTCAAGGATGTCCACGGTACCTTCCTCCTGAAACTTGAGGAAGTCTTTTGTCTTCCAGCTGCTCAGGGTTCTCTGGTCCAAG ACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTAC CAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATTAAAGTGAAGTTATTTGAAAGAAAGAAAACCTCATCATTTCTAAG GATGACTTAATTACTGTGCCTTTTCCTTTCTTTTTACACATCCTACTGTCCCTTAGGGTAAAATTTTCAGCATTAAATAAAACATTTCAA ATATATTGTATATGGCTTTAGTTGTAAACTATACTGCATGCTGACAGAGAAGCGCTCTTTTAGCTAAGCCCAGAACTTCTCTTTTGACAA TAAAGTACTGAGCAGTGGTATCATGAGGGCCACCTCCACATTGTCCCCTGCAGAATAAATGCGGATGACAGAAAGCTTATGCTGTCTACC ACTGAACAGTGATGGAGATGGTGCTAAGTTTTTACAGTTGTCTTAGCCCCAGTGGTTCTCAAGGTGGGGCTCCTGGCCCAGCAGCAGCAA CTTGTTTGTTAGAATGCAGACGCGCAGGCCCCACCTGGCCTCCTGAATCAAAATGGTGTGCGGCAGGGTGCAGCGAGCTGTTTTCACGAG GCCTCCAGGTGACTGGATGTAAGCTTGCTTGAGAACTATGGGTTTTAGCTATTCTGGTGTCTCCCTGATTTTCTACAGCGCCAGGATCCT AGTTTGGTGAGGTTTTAAATTTAATCTTATTTTTATATAAAATGATTGCCAGACGTACTATATTAAGCTTGAAGAAGCAGAAGATCCCTG TTAATGTGTATGGCCCAGGCCAAGAGCTGTCAAATGAAAAACTTTGTGCTGAAGCAGGTTTTTAGTATGTATATCTTTTTGATGGTATGA AGAATTTATTTAGGCTTGACTGTTTTAAAACACCATAATGAATGTATAATTAATTTATGTTAAAGTATTAACCCTTTGTCACAAAGGAAT GGTAATGTGATTGGCTGCCTGTTAGCCCATCGACTATTCCCGTCACGGTAGTCCTTACCTCTGTCGGCAGCTCAGAGCCTCCACATTTTT ATATTTAATTCTCATGATAAATTAGCCACCATAATCCCATGGAATTAGGTCTTGTTAAAATCTAGTCCGGGCGCAGTGGCTCACGCCTGT AATCCCAGCACTTTGGGAGGCCAAGGCGGGCTGATCACGAGGTCAAGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCTGTCTCTA CTAAAAATACAAAAATTAGCTGGGTGTGGTGGTGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATTGCTTGAACCTG GGAGGCGGAGGTTGCGGTGAGCTGAGATCACGCCACTACACTCCAGCCTGGTGACAGAGCAAGACTCCATCTCAAAAAAAATCTAAGCAA ACTATCTTTGAGTCAAAAAAAGTTGGATAACTCATCTATATTTGAAATAATGCTGTCTGAATGGCCAACATCCCAAGAATGTATTAAAAA >22523_22523_1_DHCR24-TADA2B_DHCR24_chr1_55330976_ENST00000371269_TADA2B_chr4_7055789_ENST00000310074_length(amino acids)=701AA_BP=371 MWATGAERARRGAGGSDRRREPAALTARRRTMEPAVSLAVCALLFLLWVRLKGLEFVLIHQRWVFVCLFLLPLSLIFDIYYYVRAWVVFK LSSAPRLHEQRVRDIQKQVREWKEQGSKTFMCTGRPGWLTVSLRVGKYKKTHKNIMINLMDILEVDTKKQIVRVEPLVTMGQVTALLTSI GWTLPVLPELDDLTVGGLIMGTGIESSSHKYGLFQHICTAYELVLADGSFVRCTPSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVK LRFEPVRGLEAICAKFTHESQRQENHFVEGLLYSLDEAVIMTGVMTDEAEPSKLNSIGNYYKPWFFKHVENYLKTNREGLEYIPLRHYYH RHTRSIFWELQEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPL RDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKL RPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREKRKENKNLAGSKRGKEDGKDSEFAAIENLPGFE -------------------------------------------------------------- >22523_22523_2_DHCR24-TADA2B_DHCR24_chr1_55330976_ENST00000535035_TADA2B_chr4_7055789_ENST00000310074_length(transcript)=4871nt_BP=980nt AGCTGCGGTGCGGGGGCGGCCAGGACTTCCTGGGGGGGTGGGGAGCTGGCGTTGGAGAGGGGTTGGAACGAAACAAAAATGTGATGGGGG CGGGGGAACAGAACAGGCAAAGTGCCCACTGTGTGCAGGGCATATGCGGGTACCTGGAGGGAGATGAAGAAGGGGAAGAGGGGGAGGTGC GAAGCACTCAGGTGCGGGAATGGAAGGAGCAGGGTAGCAAGACCTTCATGTGCACGGGGCGCCCTGGCTGGCTCACTGTCTCACTACGTG TCGGGAAGTACAAGAAGACACACAAAAACATCATGATCAACCTGATGGACATTCTGGAAGTGGACACCAAGAAACAGATTGTCCGTGTGG AGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCCCCGTGTTGCCTGAGCTTGATGACCTCACAG TGGGGGGCTTGATCATGGGCACAGGCATCGAGTCATCATCCCACAAGTACGGCCTGTTCCAACACATCTGCACTGCTTACGAGCTGGTCC TGGCTGATGGCAGCTTTGTGCGATGCACTCCGTCCGAAAACTCAGACCTGTTCTATGCCGTACCCTGGTCCTGTGGGACGCTGGGTTTCC TGGTGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGCTATCTGTGCCA AGTTCACCCACGAGTCCCAGCGGCAGGAGAACCACTTCGTGGAAGGGCTGCTCTACTCCCTGGATGAGGCTGTCATTATGACAGGGGTCA TGACAGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTGGCAATTACTACAAGCCGTGGTTCTTTAAGCATGTGGAGAACTATCTGAAGA CAAACCGAGAGGGCCTGGAGTACATTCCCTTGAGACACTACTACCACCGCCACACGCGCAGCATCTTCTGGGAGCTCCAGGAAGATATGG CTGCCCACGTTGGTGCTTCCCGGACTCCCCAAGAGGTGATGGAGCATTACGTGAGCATGTACATCCACGGGAACCTGGGGAAGGCCTGCA TCCCCGACACCATCCCCAACCGCGTGACAGACCACACCTGTCCCAGCGGAGGCCCCCTCTCACCCAGCCTCACCACCCCGCTGCCCCCGC TGGACATCTCTGTGGCTGAGCAGCAGCAGCTGGGCTACATGCCGCTGCGGGATGATTACGAGATCGAGTATGACCAGGATGCCGAGACGC TCATCAGCGGGCTCTCTGTCAACTATGATGACGACGACGTGGAGATCGAGCTGAAGCGCGCCCACGTGGACATGTACGTGCGGAAGCTGA AAGAGAGACAGCGGCGGAAGAACATCGCCCGTGACTACAATCTGGTGCCAGCCTTCCTGGGGAAGGACAAGAAGGAGAAGGAAAAGGCGC TGAAGCGCAAGATCACCAAGGAGGAGAAGGAGCTGCGCCTGAAGCTGAGGCCGCTGTACCAGTTCATGTCATGCAAGGAGTTTGATGACC TTTTTGAAAACATGCACAAAGAAAAAATGCTCCGGGCCAAGATCCGAGAACTGCAGCGGTACCGGCGAAACGGGATCACCAAGATGGAAG AGTCGGCAGAGTACGAGGCAGCGCGGCATAAACGGGAGAAGAGGAAGGAGAACAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGGACG GCAAAGACAGCGAGTTCGCCGCCATTGAGAACCTTCCAGGCTTCGAGCTCCTGTCAGATCGCGAGAAGGTGCTCTGCAGCTCTTTAAACT TGAGTCCAGCCCGCTACGTGACTGTGAAGACTATTATAATTAAAGACCACCTCCAGAAGCGGCAAGGAATCCCCTCCAAAAGCCGCCTTC CTAGCTACCTGGACAAAGTCCTAAAGAAAAGGATTTTGAATTTCCTCACAGAAAGCGGCTGGATCTCCAGGGACGCGTCTTGAAGCTGAG ACGCTTTGAAAGCCAGGGTGATGCTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGAGGGGAGCCGCTTCCCCACTGTTGCTCTTTTTT AAACAAATTGAGTTCCTTTTTTTAAGATAGAAATTCTTTTCATGGTCCTCTGAAAGAAGCAATAGTAACAATCTTATATTGGATCATGGG GGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGCTCCGCCTTTACCCGTTCAGTTGGGAGCTTATTG TGAGATTGGATCATTTCCTTTTGAGTGTTCTTCTCTTTGGTACAAAAGCTATTGTGGGTGACAGGAGCAGTGTTTTCCTGCTGGACCCGC AAGCCACCAGCTATTTCCTGGTGACACAAGCTCTTCTCAGGCGGGGCTGCCTGCAGGCTCCCGTTTTCTGAGCCCACGCTGCCCACAGCT GACCCCAGCGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACTCCTCCGCTGTGTAGCAGATGAGGAAAATCAG GCCAGAGGACAACAGGCTGGCGTTTTGTTGGGAACTGAAGAGGAATCTGTTGAACACAGCGACCAGATGACCTTCCATTTCACCGGCGGC AGCAGTTTCAGCGTGCAGTTCCCAAACCCCAAAGCTGACCCTGCGCCCCATTTGAATACGGCCAGAGCCTGCTGGTTCACTTTGGGTAGA GCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACC GCCAGGCCCTCTCAGTCCATTTTCCGGGGCTGCTCGGTGCTGCTGTTAAGACGTGAGTGCATTTCACTTGGAAGAACCCATTGTACAAAG TTCAAGGCTAAGAGTTCTGAATTCTGGCGTCAGCTTCCTCAGGATTTTCTTCAGTTGCAAGTACCTTTCCACTGAAAATATGAGCATGCC CGCCTGGCTAGTAGGCATCTGTAAGAGTGTCGCCAGGCCCGCGCCAGCTGAGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCAGTTG GCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGGTGCCCTGAGCCTCGAGCTGCTCTCTGTCACTGTCTTGAATCAGACTCAG AAATGGCTTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGGGGTCCTCTTTCAAGGATGTCCACGGTACCTTCCTCCTGAAACTTGAGGA AGTCTTTTGTCTTCCAGCTGCTCAGGGTTCTCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCAGCGCTCCGT TCTTCAAGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATTAAA GTGAAGTTATTTGAAAGAAAGAAAACCTCATCATTTCTAAGGATGACTTAATTACTGTGCCTTTTCCTTTCTTTTTACACATCCTACTGT CCCTTAGGGTAAAATTTTCAGCATTAAATAAAACATTTCAAATATATTGTATATGGCTTTAGTTGTAAACTATACTGCATGCTGACAGAG AAGCGCTCTTTTAGCTAAGCCCAGAACTTCTCTTTTGACAATAAAGTACTGAGCAGTGGTATCATGAGGGCCACCTCCACATTGTCCCCT GCAGAATAAATGCGGATGACAGAAAGCTTATGCTGTCTACCACTGAACAGTGATGGAGATGGTGCTAAGTTTTTACAGTTGTCTTAGCCC CAGTGGTTCTCAAGGTGGGGCTCCTGGCCCAGCAGCAGCAACTTGTTTGTTAGAATGCAGACGCGCAGGCCCCACCTGGCCTCCTGAATC AAAATGGTGTGCGGCAGGGTGCAGCGAGCTGTTTTCACGAGGCCTCCAGGTGACTGGATGTAAGCTTGCTTGAGAACTATGGGTTTTAGC TATTCTGGTGTCTCCCTGATTTTCTACAGCGCCAGGATCCTAGTTTGGTGAGGTTTTAAATTTAATCTTATTTTTATATAAAATGATTGC CAGACGTACTATATTAAGCTTGAAGAAGCAGAAGATCCCTGTTAATGTGTATGGCCCAGGCCAAGAGCTGTCAAATGAAAAACTTTGTGC TGAAGCAGGTTTTTAGTATGTATATCTTTTTGATGGTATGAAGAATTTATTTAGGCTTGACTGTTTTAAAACACCATAATGAATGTATAA TTAATTTATGTTAAAGTATTAACCCTTTGTCACAAAGGAATGGTAATGTGATTGGCTGCCTGTTAGCCCATCGACTATTCCCGTCACGGT AGTCCTTACCTCTGTCGGCAGCTCAGAGCCTCCACATTTTTATATTTAATTCTCATGATAAATTAGCCACCATAATCCCATGGAATTAGG TCTTGTTAAAATCTAGTCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCTGATCACGAGGTCAAGAG ATCGAGACCATCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGTGTGGTGGTGCATGCCTGTAGTCCC AGCTACTTGGGAGGCTGAGGTAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCGGTGAGCTGAGATCACGCCACTACACTCCAGCCT GGTGACAGAGCAAGACTCCATCTCAAAAAAAATCTAAGCAAACTATCTTTGAGTCAAAAAAAGTTGGATAACTCATCTATATTTGAAATA ATGCTGTCTGAATGGCCAACATCCCAAGAATGTATTAAAAACAGCAACCCTGCCTACCGTTTTGATGACCTTTTTCCATATTAAACAAGT >22523_22523_2_DHCR24-TADA2B_DHCR24_chr1_55330976_ENST00000535035_TADA2B_chr4_7055789_ENST00000310074_length(amino acids)=656AA_BP=326 LRCGGGQDFLGGWGAGVGEGLERNKNVMGAGEQNRQSAHCVQGICGYLEGDEEGEEGEVRSTQVREWKEQGSKTFMCTGRPGWLTVSLRV GKYKKTHKNIMINLMDILEVDTKKQIVRVEPLVTMGQVTALLTSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKYGLFQHICTAYELVL ADGSFVRCTPSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVKLRFEPVRGLEAICAKFTHESQRQENHFVEGLLYSLDEAVIMTGVM TDEAEPSKLNSIGNYYKPWFFKHVENYLKTNREGLEYIPLRHYYHRHTRSIFWELQEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKACI PDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLK ERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEE SAEYEAARHKREKRKENKNLAGSKRGKEDGKDSEFAAIENLPGFELLSDREKVLCSSLNLSPARYVTVKTIIIKDHLQKRQGIPSKSRLP -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for DHCR24-TADA2B |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for DHCR24-TADA2B |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for DHCR24-TADA2B |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |