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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:DPY19L4-SNTG1 (FusionGDB2 ID:24089)

Fusion Gene Summary for DPY19L4-SNTG1

check button Fusion gene summary
Fusion gene informationFusion gene name: DPY19L4-SNTG1
Fusion gene ID: 24089
HgeneTgene
Gene symbol

DPY19L4

SNTG1

Gene ID

286148

54212

Gene namedpy-19 like 4syntrophin gamma 1
Synonyms-G1SYN|SYN4
Cytomap

8q22.1

8q11.21

Type of geneprotein-codingprotein-coding
Descriptionprobable C-mannosyltransferase DPY19L4dpy-19-like protein 4protein dpy-19 homolog 4gamma-1-syntrophingamma1-syntrophinsyntrophin 4
Modification date2020031320200313
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000414645, ENST00000520697, 
ENST00000276467, ENST00000518864, 
ENST00000517473, ENST00000522124, 
Fusion gene scores* DoF score4 X 3 X 4=4811 X 11 X 6=726
# samples 512
** MAII scorelog2(5/48*10)=0.0588936890535686
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0		log2(12/726*10)=-2.59693514238723
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: DPY19L4 [Title/Abstract] AND SNTG1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointDPY19L4(95738669)-SNTG1(51705231), # samples:2
Anticipated loss of major functional domain due to fusion event.DPY19L4-SNTG1 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across DPY19L4 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across SNTG1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4OVTCGA-24-2035-01ADPY19L4chr8

95738669

+SNTG1chr8

51705231

+
ChimerDB4OVTCGA-24-2035DPY19L4chr8

95738669

+SNTG1chr8

51705230

+


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Fusion Gene ORF analysis for DPY19L4-SNTG1

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-intronENST00000414645ENST00000520697DPY19L4chr8

95738669

+SNTG1chr8

51705231

+
5CDS-intronENST00000414645ENST00000520697DPY19L4chr8

95738669

+SNTG1chr8

51705230

+
Frame-shiftENST00000414645ENST00000276467DPY19L4chr8

95738669

+SNTG1chr8

51705231

+
Frame-shiftENST00000414645ENST00000276467DPY19L4chr8

95738669

+SNTG1chr8

51705230

+
Frame-shiftENST00000414645ENST00000518864DPY19L4chr8

95738669

+SNTG1chr8

51705231

+
Frame-shiftENST00000414645ENST00000518864DPY19L4chr8

95738669

+SNTG1chr8

51705230

+
In-frameENST00000414645ENST00000517473DPY19L4chr8

95738669

+SNTG1chr8

51705231

+
In-frameENST00000414645ENST00000517473DPY19L4chr8

95738669

+SNTG1chr8

51705230

+
In-frameENST00000414645ENST00000522124DPY19L4chr8

95738669

+SNTG1chr8

51705231

+
In-frameENST00000414645ENST00000522124DPY19L4chr8

95738669

+SNTG1chr8

51705230

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000414645DPY19L4chr895738669+ENST00000522124SNTG1chr851705231+167422617238470
ENST00000414645DPY19L4chr895738669+ENST00000517473SNTG1chr851705231+42322617238470
ENST00000414645DPY19L4chr895738669+ENST00000522124SNTG1chr851705230+167422617238470
ENST00000414645DPY19L4chr895738669+ENST00000517473SNTG1chr851705230+42322617238470

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000414645ENST00000522124DPY19L4chr895738669+SNTG1chr851705231+0.167426870.8325731
ENST00000414645ENST00000517473DPY19L4chr895738669+SNTG1chr851705231+0.222709770.7772902
ENST00000414645ENST00000522124DPY19L4chr895738669+SNTG1chr851705230+0.167426870.8325731
ENST00000414645ENST00000517473DPY19L4chr895738669+SNTG1chr851705230+0.222709770.7772902

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Fusion Genomic Features for DPY19L4-SNTG1


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
DPY19L4chr895738669+SNTG1chr851705230+0.0029780090.997022
DPY19L4chr895738669+SNTG1chr851705230+0.0029780090.997022
DPY19L4chr895738669+SNTG1chr851705230+0.0029780090.997022
DPY19L4chr895738669+SNTG1chr851705230+0.0029780090.997022

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

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Fusion Protein Features for DPY19L4-SNTG1


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr8:95738669/chr8:51705231)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneDPY19L4chr8:95738669chr8:51705230ENST00000414645+219161_17842724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705230ENST00000414645+219184_20242724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705230ENST00000414645+219222_24042724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705230ENST00000414645+219260_28042724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705230ENST00000414645+219292_31042724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705230ENST00000414645+219316_33742724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705230ENST00000414645+219349_37042724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705230ENST00000414645+219421_44142724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705230ENST00000414645+219466_48642724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705230ENST00000414645+219489_50942724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705230ENST00000414645+219522_54242724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705230ENST00000414645+21952_7242724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705231ENST00000414645+219161_17842724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705231ENST00000414645+219184_20242724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705231ENST00000414645+219222_24042724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705231ENST00000414645+219260_28042724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705231ENST00000414645+219292_31042724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705231ENST00000414645+219316_33742724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705231ENST00000414645+219349_37042724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705231ENST00000414645+219421_44142724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705231ENST00000414645+219466_48642724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705231ENST00000414645+219489_50942724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705231ENST00000414645+219522_54242724.0TransmembraneHelical
HgeneDPY19L4chr8:95738669chr8:51705231ENST00000414645+21952_7242724.0TransmembraneHelical
TgeneSNTG1chr8:95738669chr8:51705230ENST000002764671416283_390428481.0DomainPH
TgeneSNTG1chr8:95738669chr8:51705230ENST00000276467141657_140428481.0DomainPDZ
TgeneSNTG1chr8:95738669chr8:51705230ENST000005174731517283_390428481.0DomainPH
TgeneSNTG1chr8:95738669chr8:51705230ENST00000517473151757_140428481.0DomainPDZ
TgeneSNTG1chr8:95738669chr8:51705230ENST000005188641820283_390465518.0DomainPH
TgeneSNTG1chr8:95738669chr8:51705230ENST00000518864182057_140465518.0DomainPDZ
TgeneSNTG1chr8:95738669chr8:51705230ENST000005221241719283_390465518.0DomainPH
TgeneSNTG1chr8:95738669chr8:51705230ENST00000522124171957_140465518.0DomainPDZ
TgeneSNTG1chr8:95738669chr8:51705231ENST000002764671416283_390428481.0DomainPH
TgeneSNTG1chr8:95738669chr8:51705231ENST00000276467141657_140428481.0DomainPDZ
TgeneSNTG1chr8:95738669chr8:51705231ENST000005174731517283_390428481.0DomainPH
TgeneSNTG1chr8:95738669chr8:51705231ENST00000517473151757_140428481.0DomainPDZ
TgeneSNTG1chr8:95738669chr8:51705231ENST000005188641820283_390465518.0DomainPH
TgeneSNTG1chr8:95738669chr8:51705231ENST00000518864182057_140465518.0DomainPDZ
TgeneSNTG1chr8:95738669chr8:51705231ENST000005221241719283_390465518.0DomainPH
TgeneSNTG1chr8:95738669chr8:51705231ENST00000522124171957_140465518.0DomainPDZ


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Fusion Gene Sequence for DPY19L4-SNTG1


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>24089_24089_1_DPY19L4-SNTG1_DPY19L4_chr8_95738669_ENST00000414645_SNTG1_chr8_51705230_ENST00000517473_length(transcript)=423nt_BP=226nt
AGGAGCGGGCCCCCGGAGGCCGAGGGGTTCGGCGACGCGGAGGGAGGGAGAGTCTGGGCCGCGCGGGAGCCGCAGGGCGCCCTAGCCTTC
GCAGAAACGATGGCGGAGGAAGAAGGACCACCTGTAGAGCTGCGCCAAAGAAAAAAGCCAAAGTCTTCAGAAAATAAGGAATCTGCCAAA
GAAGAGAAAATCAGTGACATTCCAATTCCTGAAAGAGCTCCAAAACGAGTTGGAATTTTCTAATTTATTTGCTGTTCTTCACTGCATTCA
TTCCTTCTTTGCTGCCAAGGTAGCTTGTTTGGACCCTCTATTTTTAGGCAATCAAGCTACTGCTTCTACTGCTGCCAGCTCTGCTACCAC

>24089_24089_1_DPY19L4-SNTG1_DPY19L4_chr8_95738669_ENST00000414645_SNTG1_chr8_51705230_ENST00000517473_length(amino acids)=70AA_BP=18

--------------------------------------------------------------
>24089_24089_2_DPY19L4-SNTG1_DPY19L4_chr8_95738669_ENST00000414645_SNTG1_chr8_51705230_ENST00000522124_length(transcript)=1674nt_BP=226nt
AGGAGCGGGCCCCCGGAGGCCGAGGGGTTCGGCGACGCGGAGGGAGGGAGAGTCTGGGCCGCGCGGGAGCCGCAGGGCGCCCTAGCCTTC
GCAGAAACGATGGCGGAGGAAGAAGGACCACCTGTAGAGCTGCGCCAAAGAAAAAAGCCAAAGTCTTCAGAAAATAAGGAATCTGCCAAA
GAAGAGAAAATCAGTGACATTCCAATTCCTGAAAGAGCTCCAAAACGAGTTGGAATTTTCTAATTTATTTGCTGTTCTTCACTGCATTCA
TTCCTTCTTTGCTGCCAAGGTAGCTTGTTTGGACCCTCTATTTTTAGGCAATCAAGCTACTGCTTCTACTGCTGCCAGCTCTGCTACCAC
GAGCAAAGCAAAGTATACAACTTGACATACTGAACTCTTCATTGACACACCCCATGACTGTATAAGCAGGACACATTTACTCATCATTTT
AGACCCTAGAGAAACCATAACATCACCAAGTCGACAGTGGAGGCAAATCAAAATTTCGGCAGAAAAAGAAGGTCATGTGGAACCTCAAAA
ACACTTCTATTCTGGATGACATCTGTGAAATATACTACATGAACAGAACAGCTTGTTCTCACTCAGTTGCTTTGTACCAGTAAGTGTATT
GCTTTCACCAAAAGTGGAGACAAAAGAATAAATTATTTGAAGAAGTATGTAAATAACATAAAAATAGTAAGCTACCTATGAATAAAAATA
CTTATTAAATGATTACTTCTGTATTTTAGATTATTTTGTATGACTAGTACATGTTGGGCAGAGTCATAGGAAAACAAATGCCCTATCTTG
TATTATGAGGGACATAAAAGAGTTAAAAACCATAAATCAGCAAGGAGCATGCAAAAAAATCTCATCAAAGAAGGATGCACTTTAATTTGC
TGATGTAAATTTGCCCTTGTGTTCTCATCCCATGATTTGACACTGGCATTCCAATTGTTTTTATCTTATTGTAAATATTCCGAAGAACTT
CCAAAGGATAATTACATTGACCCATGATAGATACAATGTGAAATGGACTATTCTCCCTTGGATCACTGTTATTGAAATGTCTTATTAGCT
GCCAAAGTCAATCAAATATGCCAACAGTGTATTAATTTAATTATGAGTGATGGAAAATTTCATGAACCTCTCATTTCTTCCTTGGTTTGA
AAGAGATTTGTATTTTACCTAATAAGATTTATTATCAAATTAAAGTTTCATAAATTTTCAGTGAACCCAAAACCTTTTGTAGAGAAAATA
ATATAAACAAATATGGTGTGAGAAACAATTCTTTGTAATCCGAAGTCTACTAGTTAATCATGAACTAAAATGTCCCCCGAAAACAGTCCC
AAAGCTATTATAGATGTTAATTAAATGACATTTTTTCATTTTAGTACTATTTTATGAGAAACAAAGGTGATATTTAAAGATAAAAGTTAA
AATTCTTTAACCTCCCTTGTCATGGAAAGTGATTAAGTAATGCCAACTATGCAGGTTGTTTTAGGTATTTTGTCCTAAGAATGTAAATGT
GAAAGGCTGGGAAATTTGAAAGCCTTAGAGGTGTGCAATTTACTCAGATTCCAGGTATTATTCAACTAGTTGTATAACATGGAACACAGT

>24089_24089_2_DPY19L4-SNTG1_DPY19L4_chr8_95738669_ENST00000414645_SNTG1_chr8_51705230_ENST00000522124_length(amino acids)=70AA_BP=18

--------------------------------------------------------------
>24089_24089_3_DPY19L4-SNTG1_DPY19L4_chr8_95738669_ENST00000414645_SNTG1_chr8_51705231_ENST00000517473_length(transcript)=423nt_BP=226nt
AGGAGCGGGCCCCCGGAGGCCGAGGGGTTCGGCGACGCGGAGGGAGGGAGAGTCTGGGCCGCGCGGGAGCCGCAGGGCGCCCTAGCCTTC
GCAGAAACGATGGCGGAGGAAGAAGGACCACCTGTAGAGCTGCGCCAAAGAAAAAAGCCAAAGTCTTCAGAAAATAAGGAATCTGCCAAA
GAAGAGAAAATCAGTGACATTCCAATTCCTGAAAGAGCTCCAAAACGAGTTGGAATTTTCTAATTTATTTGCTGTTCTTCACTGCATTCA
TTCCTTCTTTGCTGCCAAGGTAGCTTGTTTGGACCCTCTATTTTTAGGCAATCAAGCTACTGCTTCTACTGCTGCCAGCTCTGCTACCAC

>24089_24089_3_DPY19L4-SNTG1_DPY19L4_chr8_95738669_ENST00000414645_SNTG1_chr8_51705231_ENST00000517473_length(amino acids)=70AA_BP=18

--------------------------------------------------------------
>24089_24089_4_DPY19L4-SNTG1_DPY19L4_chr8_95738669_ENST00000414645_SNTG1_chr8_51705231_ENST00000522124_length(transcript)=1674nt_BP=226nt
AGGAGCGGGCCCCCGGAGGCCGAGGGGTTCGGCGACGCGGAGGGAGGGAGAGTCTGGGCCGCGCGGGAGCCGCAGGGCGCCCTAGCCTTC
GCAGAAACGATGGCGGAGGAAGAAGGACCACCTGTAGAGCTGCGCCAAAGAAAAAAGCCAAAGTCTTCAGAAAATAAGGAATCTGCCAAA
GAAGAGAAAATCAGTGACATTCCAATTCCTGAAAGAGCTCCAAAACGAGTTGGAATTTTCTAATTTATTTGCTGTTCTTCACTGCATTCA
TTCCTTCTTTGCTGCCAAGGTAGCTTGTTTGGACCCTCTATTTTTAGGCAATCAAGCTACTGCTTCTACTGCTGCCAGCTCTGCTACCAC
GAGCAAAGCAAAGTATACAACTTGACATACTGAACTCTTCATTGACACACCCCATGACTGTATAAGCAGGACACATTTACTCATCATTTT
AGACCCTAGAGAAACCATAACATCACCAAGTCGACAGTGGAGGCAAATCAAAATTTCGGCAGAAAAAGAAGGTCATGTGGAACCTCAAAA
ACACTTCTATTCTGGATGACATCTGTGAAATATACTACATGAACAGAACAGCTTGTTCTCACTCAGTTGCTTTGTACCAGTAAGTGTATT
GCTTTCACCAAAAGTGGAGACAAAAGAATAAATTATTTGAAGAAGTATGTAAATAACATAAAAATAGTAAGCTACCTATGAATAAAAATA
CTTATTAAATGATTACTTCTGTATTTTAGATTATTTTGTATGACTAGTACATGTTGGGCAGAGTCATAGGAAAACAAATGCCCTATCTTG
TATTATGAGGGACATAAAAGAGTTAAAAACCATAAATCAGCAAGGAGCATGCAAAAAAATCTCATCAAAGAAGGATGCACTTTAATTTGC
TGATGTAAATTTGCCCTTGTGTTCTCATCCCATGATTTGACACTGGCATTCCAATTGTTTTTATCTTATTGTAAATATTCCGAAGAACTT
CCAAAGGATAATTACATTGACCCATGATAGATACAATGTGAAATGGACTATTCTCCCTTGGATCACTGTTATTGAAATGTCTTATTAGCT
GCCAAAGTCAATCAAATATGCCAACAGTGTATTAATTTAATTATGAGTGATGGAAAATTTCATGAACCTCTCATTTCTTCCTTGGTTTGA
AAGAGATTTGTATTTTACCTAATAAGATTTATTATCAAATTAAAGTTTCATAAATTTTCAGTGAACCCAAAACCTTTTGTAGAGAAAATA
ATATAAACAAATATGGTGTGAGAAACAATTCTTTGTAATCCGAAGTCTACTAGTTAATCATGAACTAAAATGTCCCCCGAAAACAGTCCC
AAAGCTATTATAGATGTTAATTAAATGACATTTTTTCATTTTAGTACTATTTTATGAGAAACAAAGGTGATATTTAAAGATAAAAGTTAA
AATTCTTTAACCTCCCTTGTCATGGAAAGTGATTAAGTAATGCCAACTATGCAGGTTGTTTTAGGTATTTTGTCCTAAGAATGTAAATGT
GAAAGGCTGGGAAATTTGAAAGCCTTAGAGGTGTGCAATTTACTCAGATTCCAGGTATTATTCAACTAGTTGTATAACATGGAACACAGT

>24089_24089_4_DPY19L4-SNTG1_DPY19L4_chr8_95738669_ENST00000414645_SNTG1_chr8_51705231_ENST00000522124_length(amino acids)=70AA_BP=18

--------------------------------------------------------------

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Fusion Gene PPI Analysis for DPY19L4-SNTG1


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for DPY19L4-SNTG1


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for DPY19L4-SNTG1


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource