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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:ELMOD3-TTC27 (FusionGDB2 ID:26262)

Fusion Gene Summary for ELMOD3-TTC27

check button Fusion gene summary
Fusion gene informationFusion gene name: ELMOD3-TTC27
Fusion gene ID: 26262
HgeneTgene
Gene symbol

ELMOD3

TTC27

Gene ID

84173

55622

Gene nameELMO domain containing 3tetratricopeptide repeat domain 27
SynonymsDFNB88|LST3|RBED1|RBM29-
Cytomap

2p11.2

2p22.3

Type of geneprotein-codingprotein-coding
DescriptionELMO domain-containing protein 3ELMO/CED-12 domain containing 3RNA binding motif and ELMO/CED-12 domain 1RNA-binding motif and ELMO domain-containing protein 1RNA-binding motif protein 29deafness, autosomal recessive 88liver-specific organic anion ttetratricopeptide repeat protein 27TPR repeat protein 27
Modification date2020032020200313
UniProtAcc

Q96FG2

.
Ensembl transtripts involved in fusion geneENST00000490508, ENST00000315658, 
ENST00000393852, ENST00000409013, 
ENST00000409344, ENST00000409890, 
ENST00000428955, 
ENST00000317907, 
Fusion gene scores* DoF score3 X 2 X 2=1211 X 15 X 8=1320
# samples 320
** MAII scorelog2(3/12*10)=1.32192809488736
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
log2(20/1320*10)=-2.72246602447109
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: ELMOD3 [Title/Abstract] AND TTC27 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointELMOD3(85589383)-TTC27(32927874), # samples:2
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across ELMOD3 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across TTC27 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4BRCATCGA-AN-A0XU-01AELMOD3chr2

85589383

-TTC27chr2

32927874

+
ChimerDB4BRCATCGA-AN-A0XU-01AELMOD3chr2

85589383

+TTC27chr2

32927874

+


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Fusion Gene ORF analysis for ELMOD3-TTC27

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
3UTR-3CDSENST00000490508ENST00000317907ELMOD3chr2

85589383

+TTC27chr2

32927874

+
In-frameENST00000315658ENST00000317907ELMOD3chr2

85589383

+TTC27chr2

32927874

+
In-frameENST00000393852ENST00000317907ELMOD3chr2

85589383

+TTC27chr2

32927874

+
In-frameENST00000409013ENST00000317907ELMOD3chr2

85589383

+TTC27chr2

32927874

+
In-frameENST00000409344ENST00000317907ELMOD3chr2

85589383

+TTC27chr2

32927874

+
In-frameENST00000409890ENST00000317907ELMOD3chr2

85589383

+TTC27chr2

32927874

+
In-frameENST00000428955ENST00000317907ELMOD3chr2

85589383

+TTC27chr2

32927874

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000409013ELMOD3chr285589383+ENST00000317907TTC27chr232927874+21366104812022513
ENST00000409890ELMOD3chr285589383+ENST00000317907TTC27chr232927874+23227966672208513
ENST00000409344ELMOD3chr285589383+ENST00000317907TTC27chr232927874+22877616322173513
ENST00000428955ELMOD3chr285589383+ENST00000317907TTC27chr232927874+20555294001941513
ENST00000393852ELMOD3chr285589383+ENST00000317907TTC27chr232927874+20555294001941513
ENST00000315658ELMOD3chr285589383+ENST00000317907TTC27chr232927874+19143882591800513

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000409013ENST00000317907ELMOD3chr285589383+TTC27chr232927874+0.0011790780.99882096
ENST00000409890ENST00000317907ELMOD3chr285589383+TTC27chr232927874+0.0010791880.9989208
ENST00000409344ENST00000317907ELMOD3chr285589383+TTC27chr232927874+0.0016063560.9983936
ENST00000428955ENST00000317907ELMOD3chr285589383+TTC27chr232927874+0.0012061070.99879384
ENST00000393852ENST00000317907ELMOD3chr285589383+TTC27chr232927874+0.0012061070.99879384
ENST00000315658ENST00000317907ELMOD3chr285589383+TTC27chr232927874+0.0009061340.9990939

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Fusion Genomic Features for ELMOD3-TTC27


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
ELMOD3chr285589383+TTC27chr232927873+3.14E-060.9999969
ELMOD3chr285589383+TTC27chr232927873+3.14E-060.9999969

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

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Fusion Protein Features for ELMOD3-TTC27


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr2:85589383/chr2:32927874)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
ELMOD3

Q96FG2

.
FUNCTION: Acts as a GTPase-activating protein (GAP) for ARL2 with low specific activity. {ECO:0000269|PubMed:24039609}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneTTC27chr2:85589383chr2:32927874ENST00000317907820453_486373844.0RepeatNote=TPR 1
TgeneTTC27chr2:85589383chr2:32927874ENST00000317907820492_525373844.0RepeatNote=TPR 2
TgeneTTC27chr2:85589383chr2:32927874ENST00000317907820527_560373844.0RepeatNote=TPR 3
TgeneTTC27chr2:85589383chr2:32927874ENST00000317907820561_594373844.0RepeatNote=TPR 4
TgeneTTC27chr2:85589383chr2:32927874ENST00000317907820596_628373844.0RepeatNote=TPR 5
TgeneTTC27chr2:85589383chr2:32927874ENST00000317907820629_662373844.0RepeatNote=TPR 6

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneELMOD3chr2:85589383chr2:32927874ENST00000315658+311170_32443392.0DomainELMO
HgeneELMOD3chr2:85589383chr2:32927874ENST00000393852+413170_32443382.0DomainELMO
HgeneELMOD3chr2:85589383chr2:32927874ENST00000409013+514170_32443382.0DomainELMO
HgeneELMOD3chr2:85589383chr2:32927874ENST00000409344+615170_32443382.0DomainELMO
HgeneELMOD3chr2:85589383chr2:32927874ENST00000409890+514170_32443382.0DomainELMO
HgeneELMOD3chr2:85589383chr2:32927874ENST00000428955+411170_32443255.0DomainELMO


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Fusion Gene Sequence for ELMOD3-TTC27


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>26262_26262_1_ELMOD3-TTC27_ELMOD3_chr2_85589383_ENST00000315658_TTC27_chr2_32927874_ENST00000317907_length(transcript)=1914nt_BP=388nt
CCCCAAGTTTGGAAAGCTCTTTTAACGAGCTGAGGCTTCGAAGACCTCAGAGGACTTCTCTCAGCACTCACAGAAACCTCCTACACCCTC
GGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTCTGAGTGACTGCCAAGGAAGGCAAAGGTAGAGCAACTGGATCTCTGGCTCTCCAC
ATAGCTTCTGATCTCAGACCTTACTAAAATGCTTTCTGGGCCCAAGGACAAAGCTCACATGAACAAATGATTTTGAGTCATGAATGAAAA
ATCTTGCTCTTTCCATAGTAAAGAAGAATTAAGAGATGGACAGGGTGAAAGATTGTCTGCTGGATATTCTCCATCATATGACAAGGACAA
GAGTGTTCTGGCTTTCAGAGGAATCCCTTGTTTGCTTTCACAACCAAAGTTCTGGGCCATTCAGACATCAGCCTTGATCCTCCGGACAAA
ACTTGAGAAAGGAAGTACTCGCCGAGTGGAACGGGCAATGAGGCAGACACAGGCTCTTGCAGACCAATTTGAAGATAAAACTACATCTGT
ATTGGAACGCCTGAAGATTTTCTATTGCTGTCAAGTACCACCTCACTGGGCCATTCAGCGCCAACTTGCAAGTTTGCTCTTTGAGTTGGG
ATGTACCAGTTCAGCCCTTCAGATATTTGAAAAGCTAGAAATGTGGGAAGATGTTGTCATTTGTTATGAAAGAGCCGGGCAGCACGGAAA
GGCAGAAGAAATCCTTAGACAAGAGCTGGAGAAAAAAGAAACGCCTAGTTTATACTGCTTGCTTGGAGATGTCCTCGGAGACCATTCTTG
CTATGACAAGGCCTGGGAGTTGTCCCGGTACCGCAGTGCTCGTGCTCAGCGCTCCAAAGCCCTCCTTCATCTTCGGAACAAGGAGTTTCA
AGAGTGTGTAGAGTGCTTCGAACGCTCGGTTAAGATTAATCCCATGCAGCTCGGGGTGTGGTTTTCTCTCGGTTGTGCCTATTTGGCCTT
GGAAGACTATCAAGGTTCAGCAAAGGCATTTCAGCGCTGTGTGACTCTAGAACCCGATAATGCTGAAGCTTGGAACAATTTGTCAACTTC
CTATATCCGATTAAAACAAAAAGTAAAAGCTTTTAGAACTTTACAAGAAGCTCTCAAGTGTAACTATGAACACTGGCAGATTTGGGAAAA
CTACATCCTCACCAGCACTGACGTTGGGGAATTTTCAGAAGCCATTAAAGCTTATCACCGGCTCTTGGACTTACGTGACAAATACAAAGA
TGTTCAGGTCCTTAAAATTCTAGTCAGGGCAGTGATTGATGGGATGACTGATCGAAGTGGAGATGTTGCAACTGGCCTCAAAGGAAAGCT
GCAGGAGTTATTTGGCAGAGTGACTTCAAGAGTGACAAATGATGGAGAAATCTGGAGGCTGTATGCCCACGTATATGGAAATGGGCAGAG
TGAAAAGCCTGATGAAAATGAAAAGGCATTCCAGTGCCTCTCAAAGGCATACAAGTGTGACACCCAGTCCAATTGTTGGGAGAAAGATAT
TACATCATTTAAGGAAGTTGTTCAAAGAGCCTTAGGACTTGCACATGTGGCCATAAAATGCAGTAAAAACAAATCCAGTTCCCAAGAAGC
TGTACAAATGCTTTCTTCTGTTCGACTCAATTTACGGGGCTTGTTATCTAAAGCAAAGCAACTTTTTACAGATGTGGCAACTGGAGAAAT
GTCCAGGGAATTAGCTGATGACATAACAGCTATGGACACCTTAGTGACAGAGCTCCAAGACCTAAGCAACCAGTTTCGAAATCAGTATTG
ATTCTGCTGGAAGCAGATTCTGGAAAAGGTGCTTTCACCTGCTGGTAAAAGATACATCTGTATATCTGAAATGCAAGATATTGATTTTTA

>26262_26262_1_ELMOD3-TTC27_ELMOD3_chr2_85589383_ENST00000315658_TTC27_chr2_32927874_ENST00000317907_length(amino acids)=513AA_BP=43
MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPCLLSQPKFWAIQTSALILRTKLEKGSTRRVERAMRQTQALADQFEDK
TTSVLERLKIFYCCQVPPHWAIQRQLASLLFELGCTSSALQIFEKLEMWEDVVICYERAGQHGKAEEILRQELEKKETPSLYCLLGDVLG
DHSCYDKAWELSRYRSARAQRSKALLHLRNKEFQECVECFERSVKINPMQLGVWFSLGCAYLALEDYQGSAKAFQRCVTLEPDNAEAWNN
LSTSYIRLKQKVKAFRTLQEALKCNYEHWQIWENYILTSTDVGEFSEAIKAYHRLLDLRDKYKDVQVLKILVRAVIDGMTDRSGDVATGL
KGKLQELFGRVTSRVTNDGEIWRLYAHVYGNGQSEKPDENEKAFQCLSKAYKCDTQSNCWEKDITSFKEVVQRALGLAHVAIKCSKNKSS

--------------------------------------------------------------
>26262_26262_2_ELMOD3-TTC27_ELMOD3_chr2_85589383_ENST00000393852_TTC27_chr2_32927874_ENST00000317907_length(transcript)=2055nt_BP=529nt
GCGGCTGTGCGCATGAGCAGATGAGGCCTAGCCGAGGCGGCGGGACCCCCAAGTTTGGAAAGCTCTTTTAACGGCTATGCGAAAGTTCTG
TCCAAAGGCTGCTCACAGCCCCTGTCTGACTGGTTGTCATGATGAATTGAGCTCTCTGTTACCTGCGCATCACAACCGAGCTGAGGCTTC
GAAGACCTCAGAGGACTTCTCTCAGCACTCACAGAAACCTCCTACACCCTCGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTCTGA
GTGACTGCCAAGGAAGGCAAAGGTAGAGCAACTGGATCTCTGGCTCTCCACATAGCTTCTGATCTCAGACCTTACTAAAATGCTTTCTGG
GCCCAAGGACAAAGCTCACATGAACAAATGATTTTGAGTCATGAATGAAAAATCTTGCTCTTTCCATAGTAAAGAAGAATTAAGAGATGG
ACAGGGTGAAAGATTGTCTGCTGGATATTCTCCATCATATGACAAGGACAAGAGTGTTCTGGCTTTCAGAGGAATCCCTTGTTTGCTTTC
ACAACCAAAGTTCTGGGCCATTCAGACATCAGCCTTGATCCTCCGGACAAAACTTGAGAAAGGAAGTACTCGCCGAGTGGAACGGGCAAT
GAGGCAGACACAGGCTCTTGCAGACCAATTTGAAGATAAAACTACATCTGTATTGGAACGCCTGAAGATTTTCTATTGCTGTCAAGTACC
ACCTCACTGGGCCATTCAGCGCCAACTTGCAAGTTTGCTCTTTGAGTTGGGATGTACCAGTTCAGCCCTTCAGATATTTGAAAAGCTAGA
AATGTGGGAAGATGTTGTCATTTGTTATGAAAGAGCCGGGCAGCACGGAAAGGCAGAAGAAATCCTTAGACAAGAGCTGGAGAAAAAAGA
AACGCCTAGTTTATACTGCTTGCTTGGAGATGTCCTCGGAGACCATTCTTGCTATGACAAGGCCTGGGAGTTGTCCCGGTACCGCAGTGC
TCGTGCTCAGCGCTCCAAAGCCCTCCTTCATCTTCGGAACAAGGAGTTTCAAGAGTGTGTAGAGTGCTTCGAACGCTCGGTTAAGATTAA
TCCCATGCAGCTCGGGGTGTGGTTTTCTCTCGGTTGTGCCTATTTGGCCTTGGAAGACTATCAAGGTTCAGCAAAGGCATTTCAGCGCTG
TGTGACTCTAGAACCCGATAATGCTGAAGCTTGGAACAATTTGTCAACTTCCTATATCCGATTAAAACAAAAAGTAAAAGCTTTTAGAAC
TTTACAAGAAGCTCTCAAGTGTAACTATGAACACTGGCAGATTTGGGAAAACTACATCCTCACCAGCACTGACGTTGGGGAATTTTCAGA
AGCCATTAAAGCTTATCACCGGCTCTTGGACTTACGTGACAAATACAAAGATGTTCAGGTCCTTAAAATTCTAGTCAGGGCAGTGATTGA
TGGGATGACTGATCGAAGTGGAGATGTTGCAACTGGCCTCAAAGGAAAGCTGCAGGAGTTATTTGGCAGAGTGACTTCAAGAGTGACAAA
TGATGGAGAAATCTGGAGGCTGTATGCCCACGTATATGGAAATGGGCAGAGTGAAAAGCCTGATGAAAATGAAAAGGCATTCCAGTGCCT
CTCAAAGGCATACAAGTGTGACACCCAGTCCAATTGTTGGGAGAAAGATATTACATCATTTAAGGAAGTTGTTCAAAGAGCCTTAGGACT
TGCACATGTGGCCATAAAATGCAGTAAAAACAAATCCAGTTCCCAAGAAGCTGTACAAATGCTTTCTTCTGTTCGACTCAATTTACGGGG
CTTGTTATCTAAAGCAAAGCAACTTTTTACAGATGTGGCAACTGGAGAAATGTCCAGGGAATTAGCTGATGACATAACAGCTATGGACAC
CTTAGTGACAGAGCTCCAAGACCTAAGCAACCAGTTTCGAAATCAGTATTGATTCTGCTGGAAGCAGATTCTGGAAAAGGTGCTTTCACC

>26262_26262_2_ELMOD3-TTC27_ELMOD3_chr2_85589383_ENST00000393852_TTC27_chr2_32927874_ENST00000317907_length(amino acids)=513AA_BP=43
MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPCLLSQPKFWAIQTSALILRTKLEKGSTRRVERAMRQTQALADQFEDK
TTSVLERLKIFYCCQVPPHWAIQRQLASLLFELGCTSSALQIFEKLEMWEDVVICYERAGQHGKAEEILRQELEKKETPSLYCLLGDVLG
DHSCYDKAWELSRYRSARAQRSKALLHLRNKEFQECVECFERSVKINPMQLGVWFSLGCAYLALEDYQGSAKAFQRCVTLEPDNAEAWNN
LSTSYIRLKQKVKAFRTLQEALKCNYEHWQIWENYILTSTDVGEFSEAIKAYHRLLDLRDKYKDVQVLKILVRAVIDGMTDRSGDVATGL
KGKLQELFGRVTSRVTNDGEIWRLYAHVYGNGQSEKPDENEKAFQCLSKAYKCDTQSNCWEKDITSFKEVVQRALGLAHVAIKCSKNKSS

--------------------------------------------------------------
>26262_26262_3_ELMOD3-TTC27_ELMOD3_chr2_85589383_ENST00000409013_TTC27_chr2_32927874_ENST00000317907_length(transcript)=2136nt_BP=610nt
AAATGTAGTTCTCGGGGCCAGGGGAGCCGGCACGGAAGCGGCTGTGCGCATGAGCAGATGAGGCCTAGCCGAGGCGGCGGGACCCCCAAG
TTTGGAAAGCTCTTTTAACGGCTATGCGAAAGTTCTGTCCAAAGGCTGCTCACAGCCCCTGTCTGACTGGTTGTCATGATGAATTGAGCT
CTCTGTTACCTGCGCATCACAACCGATAGTAACTGTCCCTACTGAAGGCCCCAGGAGTGCTCCAGCCAGAGCTGAGGCTTCGAAGACCTC
AGAGGACTTCTCTCAGCACTCACAGAAACCTCCTACACCCTCGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTCTGAGTGACTGCC
AAGGAAGGCAAAGGTAGAGCAACTGGATCTCTGGCTCTCCACATAGCTTCTGATCTCAGACCTTACTAAAATGCTTTCTGGGCCCAAGGA
CAAAGCTCACATGAACAAATGATTTTGAGTCATGAATGAAAAATCTTGCTCTTTCCATAGTAAAGAAGAATTAAGAGATGGACAGGGTGA
AAGATTGTCTGCTGGATATTCTCCATCATATGACAAGGACAAGAGTGTTCTGGCTTTCAGAGGAATCCCTTGTTTGCTTTCACAACCAAA
GTTCTGGGCCATTCAGACATCAGCCTTGATCCTCCGGACAAAACTTGAGAAAGGAAGTACTCGCCGAGTGGAACGGGCAATGAGGCAGAC
ACAGGCTCTTGCAGACCAATTTGAAGATAAAACTACATCTGTATTGGAACGCCTGAAGATTTTCTATTGCTGTCAAGTACCACCTCACTG
GGCCATTCAGCGCCAACTTGCAAGTTTGCTCTTTGAGTTGGGATGTACCAGTTCAGCCCTTCAGATATTTGAAAAGCTAGAAATGTGGGA
AGATGTTGTCATTTGTTATGAAAGAGCCGGGCAGCACGGAAAGGCAGAAGAAATCCTTAGACAAGAGCTGGAGAAAAAAGAAACGCCTAG
TTTATACTGCTTGCTTGGAGATGTCCTCGGAGACCATTCTTGCTATGACAAGGCCTGGGAGTTGTCCCGGTACCGCAGTGCTCGTGCTCA
GCGCTCCAAAGCCCTCCTTCATCTTCGGAACAAGGAGTTTCAAGAGTGTGTAGAGTGCTTCGAACGCTCGGTTAAGATTAATCCCATGCA
GCTCGGGGTGTGGTTTTCTCTCGGTTGTGCCTATTTGGCCTTGGAAGACTATCAAGGTTCAGCAAAGGCATTTCAGCGCTGTGTGACTCT
AGAACCCGATAATGCTGAAGCTTGGAACAATTTGTCAACTTCCTATATCCGATTAAAACAAAAAGTAAAAGCTTTTAGAACTTTACAAGA
AGCTCTCAAGTGTAACTATGAACACTGGCAGATTTGGGAAAACTACATCCTCACCAGCACTGACGTTGGGGAATTTTCAGAAGCCATTAA
AGCTTATCACCGGCTCTTGGACTTACGTGACAAATACAAAGATGTTCAGGTCCTTAAAATTCTAGTCAGGGCAGTGATTGATGGGATGAC
TGATCGAAGTGGAGATGTTGCAACTGGCCTCAAAGGAAAGCTGCAGGAGTTATTTGGCAGAGTGACTTCAAGAGTGACAAATGATGGAGA
AATCTGGAGGCTGTATGCCCACGTATATGGAAATGGGCAGAGTGAAAAGCCTGATGAAAATGAAAAGGCATTCCAGTGCCTCTCAAAGGC
ATACAAGTGTGACACCCAGTCCAATTGTTGGGAGAAAGATATTACATCATTTAAGGAAGTTGTTCAAAGAGCCTTAGGACTTGCACATGT
GGCCATAAAATGCAGTAAAAACAAATCCAGTTCCCAAGAAGCTGTACAAATGCTTTCTTCTGTTCGACTCAATTTACGGGGCTTGTTATC
TAAAGCAAAGCAACTTTTTACAGATGTGGCAACTGGAGAAATGTCCAGGGAATTAGCTGATGACATAACAGCTATGGACACCTTAGTGAC
AGAGCTCCAAGACCTAAGCAACCAGTTTCGAAATCAGTATTGATTCTGCTGGAAGCAGATTCTGGAAAAGGTGCTTTCACCTGCTGGTAA

>26262_26262_3_ELMOD3-TTC27_ELMOD3_chr2_85589383_ENST00000409013_TTC27_chr2_32927874_ENST00000317907_length(amino acids)=513AA_BP=43
MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPCLLSQPKFWAIQTSALILRTKLEKGSTRRVERAMRQTQALADQFEDK
TTSVLERLKIFYCCQVPPHWAIQRQLASLLFELGCTSSALQIFEKLEMWEDVVICYERAGQHGKAEEILRQELEKKETPSLYCLLGDVLG
DHSCYDKAWELSRYRSARAQRSKALLHLRNKEFQECVECFERSVKINPMQLGVWFSLGCAYLALEDYQGSAKAFQRCVTLEPDNAEAWNN
LSTSYIRLKQKVKAFRTLQEALKCNYEHWQIWENYILTSTDVGEFSEAIKAYHRLLDLRDKYKDVQVLKILVRAVIDGMTDRSGDVATGL
KGKLQELFGRVTSRVTNDGEIWRLYAHVYGNGQSEKPDENEKAFQCLSKAYKCDTQSNCWEKDITSFKEVVQRALGLAHVAIKCSKNKSS

--------------------------------------------------------------
>26262_26262_4_ELMOD3-TTC27_ELMOD3_chr2_85589383_ENST00000409344_TTC27_chr2_32927874_ENST00000317907_length(transcript)=2287nt_BP=761nt
GGAAGCGGCTGTGCGCATGAGCAGATGAGGCCTAGCCGAGGCGGCGGGACCCCCAAGTTTGGAAAGCTCTTTTAACGGCTATGCGAAAGT
TCTGTCCAAAGGCTGCTCACAGCCCCTGTCTGACTGGTTGTCATGATGAATTGAGCTCTCTGTTACCTGCGCATCACAACCGATAGTAAC
TGTCCCTACTGAAGGCCCCAGGAGTGCTCCAGCCAGGTGTGGAAAGCTGGTCACGATTCTATGCTACTTGGTTCATTTTCTACACAGCAA
CAGAAGAGCCCTCCTGAGATTGCTATTACCATACCCGCCTGTCACCTTGCCAAGGCTGGCCAATGCCGAGCGTGTTGGCTCATGCCTGTA
ATCCCAGCACTTTGGAAGGCCGAGGCAGGCGGATCACGAGAGCTGAGGCTTCGAAGACCTCAGAGGACTTCTCTCAGCACTCACAGAAAC
CTCCTACACCCTCGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTCTGAGTGACTGCCAAGGAAGGCAAAGGTAGAGCAACTGGATC
TCTGGCTCTCCACATAGCTTCTGATCTCAGACCTTACTAAAATGCTTTCTGGGCCCAAGGACAAAGCTCACATGAACAAATGATTTTGAG
TCATGAATGAAAAATCTTGCTCTTTCCATAGTAAAGAAGAATTAAGAGATGGACAGGGTGAAAGATTGTCTGCTGGATATTCTCCATCAT
ATGACAAGGACAAGAGTGTTCTGGCTTTCAGAGGAATCCCTTGTTTGCTTTCACAACCAAAGTTCTGGGCCATTCAGACATCAGCCTTGA
TCCTCCGGACAAAACTTGAGAAAGGAAGTACTCGCCGAGTGGAACGGGCAATGAGGCAGACACAGGCTCTTGCAGACCAATTTGAAGATA
AAACTACATCTGTATTGGAACGCCTGAAGATTTTCTATTGCTGTCAAGTACCACCTCACTGGGCCATTCAGCGCCAACTTGCAAGTTTGC
TCTTTGAGTTGGGATGTACCAGTTCAGCCCTTCAGATATTTGAAAAGCTAGAAATGTGGGAAGATGTTGTCATTTGTTATGAAAGAGCCG
GGCAGCACGGAAAGGCAGAAGAAATCCTTAGACAAGAGCTGGAGAAAAAAGAAACGCCTAGTTTATACTGCTTGCTTGGAGATGTCCTCG
GAGACCATTCTTGCTATGACAAGGCCTGGGAGTTGTCCCGGTACCGCAGTGCTCGTGCTCAGCGCTCCAAAGCCCTCCTTCATCTTCGGA
ACAAGGAGTTTCAAGAGTGTGTAGAGTGCTTCGAACGCTCGGTTAAGATTAATCCCATGCAGCTCGGGGTGTGGTTTTCTCTCGGTTGTG
CCTATTTGGCCTTGGAAGACTATCAAGGTTCAGCAAAGGCATTTCAGCGCTGTGTGACTCTAGAACCCGATAATGCTGAAGCTTGGAACA
ATTTGTCAACTTCCTATATCCGATTAAAACAAAAAGTAAAAGCTTTTAGAACTTTACAAGAAGCTCTCAAGTGTAACTATGAACACTGGC
AGATTTGGGAAAACTACATCCTCACCAGCACTGACGTTGGGGAATTTTCAGAAGCCATTAAAGCTTATCACCGGCTCTTGGACTTACGTG
ACAAATACAAAGATGTTCAGGTCCTTAAAATTCTAGTCAGGGCAGTGATTGATGGGATGACTGATCGAAGTGGAGATGTTGCAACTGGCC
TCAAAGGAAAGCTGCAGGAGTTATTTGGCAGAGTGACTTCAAGAGTGACAAATGATGGAGAAATCTGGAGGCTGTATGCCCACGTATATG
GAAATGGGCAGAGTGAAAAGCCTGATGAAAATGAAAAGGCATTCCAGTGCCTCTCAAAGGCATACAAGTGTGACACCCAGTCCAATTGTT
GGGAGAAAGATATTACATCATTTAAGGAAGTTGTTCAAAGAGCCTTAGGACTTGCACATGTGGCCATAAAATGCAGTAAAAACAAATCCA
GTTCCCAAGAAGCTGTACAAATGCTTTCTTCTGTTCGACTCAATTTACGGGGCTTGTTATCTAAAGCAAAGCAACTTTTTACAGATGTGG
CAACTGGAGAAATGTCCAGGGAATTAGCTGATGACATAACAGCTATGGACACCTTAGTGACAGAGCTCCAAGACCTAAGCAACCAGTTTC
GAAATCAGTATTGATTCTGCTGGAAGCAGATTCTGGAAAAGGTGCTTTCACCTGCTGGTAAAAGATACATCTGTATATCTGAAATGCAAG

>26262_26262_4_ELMOD3-TTC27_ELMOD3_chr2_85589383_ENST00000409344_TTC27_chr2_32927874_ENST00000317907_length(amino acids)=513AA_BP=43
MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPCLLSQPKFWAIQTSALILRTKLEKGSTRRVERAMRQTQALADQFEDK
TTSVLERLKIFYCCQVPPHWAIQRQLASLLFELGCTSSALQIFEKLEMWEDVVICYERAGQHGKAEEILRQELEKKETPSLYCLLGDVLG
DHSCYDKAWELSRYRSARAQRSKALLHLRNKEFQECVECFERSVKINPMQLGVWFSLGCAYLALEDYQGSAKAFQRCVTLEPDNAEAWNN
LSTSYIRLKQKVKAFRTLQEALKCNYEHWQIWENYILTSTDVGEFSEAIKAYHRLLDLRDKYKDVQVLKILVRAVIDGMTDRSGDVATGL
KGKLQELFGRVTSRVTNDGEIWRLYAHVYGNGQSEKPDENEKAFQCLSKAYKCDTQSNCWEKDITSFKEVVQRALGLAHVAIKCSKNKSS

--------------------------------------------------------------
>26262_26262_5_ELMOD3-TTC27_ELMOD3_chr2_85589383_ENST00000409890_TTC27_chr2_32927874_ENST00000317907_length(transcript)=2322nt_BP=796nt
AAATGTAGTTCTCGGGGCCAGGGGAGCCGGCACGGAAGCGGCTGTGCGCATGAGCAGATGAGGCCTAGCCGAGGCGGCGGGACCCCCAAG
TTTGGAAAGCTCTTTTAACGGCTATGCGAAAGTTCTGTCCAAAGGCTGCTCACAGCCCCTGTCTGACTGGTTGTCATGATGAATTGAGCT
CTCTGTTACCTGCGCATCACAACCGATAGTAACTGTCCCTACTGAAGGCCCCAGGAGTGCTCCAGCCAGGTGTGGAAAGCTGGTCACGAT
TCTATGCTACTTGGTTCATTTTCTACACAGCAACAGAAGAGCCCTCCTGAGATTGCTATTACCATACCCGCCTGTCACCTTGCCAAGGCT
GGCCAATGTGTGTTTTGTCATAGGCTGTCATGGAGGCCATGATGGAGGAAAAGGAAAGGGGAGGCAGATGTTGAGAGCTGAGGCTTCGAA
GACCTCAGAGGACTTCTCTCAGCACTCACAGAAACCTCCTACACCCTCGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTCTGAGTG
ACTGCCAAGGAAGGCAAAGGTAGAGCAACTGGATCTCTGGCTCTCCACATAGCTTCTGATCTCAGACCTTACTAAAATGCTTTCTGGGCC
CAAGGACAAAGCTCACATGAACAAATGATTTTGAGTCATGAATGAAAAATCTTGCTCTTTCCATAGTAAAGAAGAATTAAGAGATGGACA
GGGTGAAAGATTGTCTGCTGGATATTCTCCATCATATGACAAGGACAAGAGTGTTCTGGCTTTCAGAGGAATCCCTTGTTTGCTTTCACA
ACCAAAGTTCTGGGCCATTCAGACATCAGCCTTGATCCTCCGGACAAAACTTGAGAAAGGAAGTACTCGCCGAGTGGAACGGGCAATGAG
GCAGACACAGGCTCTTGCAGACCAATTTGAAGATAAAACTACATCTGTATTGGAACGCCTGAAGATTTTCTATTGCTGTCAAGTACCACC
TCACTGGGCCATTCAGCGCCAACTTGCAAGTTTGCTCTTTGAGTTGGGATGTACCAGTTCAGCCCTTCAGATATTTGAAAAGCTAGAAAT
GTGGGAAGATGTTGTCATTTGTTATGAAAGAGCCGGGCAGCACGGAAAGGCAGAAGAAATCCTTAGACAAGAGCTGGAGAAAAAAGAAAC
GCCTAGTTTATACTGCTTGCTTGGAGATGTCCTCGGAGACCATTCTTGCTATGACAAGGCCTGGGAGTTGTCCCGGTACCGCAGTGCTCG
TGCTCAGCGCTCCAAAGCCCTCCTTCATCTTCGGAACAAGGAGTTTCAAGAGTGTGTAGAGTGCTTCGAACGCTCGGTTAAGATTAATCC
CATGCAGCTCGGGGTGTGGTTTTCTCTCGGTTGTGCCTATTTGGCCTTGGAAGACTATCAAGGTTCAGCAAAGGCATTTCAGCGCTGTGT
GACTCTAGAACCCGATAATGCTGAAGCTTGGAACAATTTGTCAACTTCCTATATCCGATTAAAACAAAAAGTAAAAGCTTTTAGAACTTT
ACAAGAAGCTCTCAAGTGTAACTATGAACACTGGCAGATTTGGGAAAACTACATCCTCACCAGCACTGACGTTGGGGAATTTTCAGAAGC
CATTAAAGCTTATCACCGGCTCTTGGACTTACGTGACAAATACAAAGATGTTCAGGTCCTTAAAATTCTAGTCAGGGCAGTGATTGATGG
GATGACTGATCGAAGTGGAGATGTTGCAACTGGCCTCAAAGGAAAGCTGCAGGAGTTATTTGGCAGAGTGACTTCAAGAGTGACAAATGA
TGGAGAAATCTGGAGGCTGTATGCCCACGTATATGGAAATGGGCAGAGTGAAAAGCCTGATGAAAATGAAAAGGCATTCCAGTGCCTCTC
AAAGGCATACAAGTGTGACACCCAGTCCAATTGTTGGGAGAAAGATATTACATCATTTAAGGAAGTTGTTCAAAGAGCCTTAGGACTTGC
ACATGTGGCCATAAAATGCAGTAAAAACAAATCCAGTTCCCAAGAAGCTGTACAAATGCTTTCTTCTGTTCGACTCAATTTACGGGGCTT
GTTATCTAAAGCAAAGCAACTTTTTACAGATGTGGCAACTGGAGAAATGTCCAGGGAATTAGCTGATGACATAACAGCTATGGACACCTT
AGTGACAGAGCTCCAAGACCTAAGCAACCAGTTTCGAAATCAGTATTGATTCTGCTGGAAGCAGATTCTGGAAAAGGTGCTTTCACCTGC

>26262_26262_5_ELMOD3-TTC27_ELMOD3_chr2_85589383_ENST00000409890_TTC27_chr2_32927874_ENST00000317907_length(amino acids)=513AA_BP=43
MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPCLLSQPKFWAIQTSALILRTKLEKGSTRRVERAMRQTQALADQFEDK
TTSVLERLKIFYCCQVPPHWAIQRQLASLLFELGCTSSALQIFEKLEMWEDVVICYERAGQHGKAEEILRQELEKKETPSLYCLLGDVLG
DHSCYDKAWELSRYRSARAQRSKALLHLRNKEFQECVECFERSVKINPMQLGVWFSLGCAYLALEDYQGSAKAFQRCVTLEPDNAEAWNN
LSTSYIRLKQKVKAFRTLQEALKCNYEHWQIWENYILTSTDVGEFSEAIKAYHRLLDLRDKYKDVQVLKILVRAVIDGMTDRSGDVATGL
KGKLQELFGRVTSRVTNDGEIWRLYAHVYGNGQSEKPDENEKAFQCLSKAYKCDTQSNCWEKDITSFKEVVQRALGLAHVAIKCSKNKSS

--------------------------------------------------------------
>26262_26262_6_ELMOD3-TTC27_ELMOD3_chr2_85589383_ENST00000428955_TTC27_chr2_32927874_ENST00000317907_length(transcript)=2055nt_BP=529nt
GCGGCTGTGCGCATGAGCAGATGAGGCCTAGCCGAGGCGGCGGGACCCCCAAGTTTGGAAAGCTCTTTTAACGGCTATGCGAAAGTTCTG
TCCAAAGGCTGCTCACAGCCCCTGTCTGACTGGTTGTCATGATGAATTGAGCTCTCTGTTACCTGCGCATCACAACCGAGCTGAGGCTTC
GAAGACCTCAGAGGACTTCTCTCAGCACTCACAGAAACCTCCTACACCCTCGGATGGCACAAAGGGACTGTTTTCTTACTCTTAGTCTGA
GTGACTGCCAAGGAAGGCAAAGGTAGAGCAACTGGATCTCTGGCTCTCCACATAGCTTCTGATCTCAGACCTTACTAAAATGCTTTCTGG
GCCCAAGGACAAAGCTCACATGAACAAATGATTTTGAGTCATGAATGAAAAATCTTGCTCTTTCCATAGTAAAGAAGAATTAAGAGATGG
ACAGGGTGAAAGATTGTCTGCTGGATATTCTCCATCATATGACAAGGACAAGAGTGTTCTGGCTTTCAGAGGAATCCCTTGTTTGCTTTC
ACAACCAAAGTTCTGGGCCATTCAGACATCAGCCTTGATCCTCCGGACAAAACTTGAGAAAGGAAGTACTCGCCGAGTGGAACGGGCAAT
GAGGCAGACACAGGCTCTTGCAGACCAATTTGAAGATAAAACTACATCTGTATTGGAACGCCTGAAGATTTTCTATTGCTGTCAAGTACC
ACCTCACTGGGCCATTCAGCGCCAACTTGCAAGTTTGCTCTTTGAGTTGGGATGTACCAGTTCAGCCCTTCAGATATTTGAAAAGCTAGA
AATGTGGGAAGATGTTGTCATTTGTTATGAAAGAGCCGGGCAGCACGGAAAGGCAGAAGAAATCCTTAGACAAGAGCTGGAGAAAAAAGA
AACGCCTAGTTTATACTGCTTGCTTGGAGATGTCCTCGGAGACCATTCTTGCTATGACAAGGCCTGGGAGTTGTCCCGGTACCGCAGTGC
TCGTGCTCAGCGCTCCAAAGCCCTCCTTCATCTTCGGAACAAGGAGTTTCAAGAGTGTGTAGAGTGCTTCGAACGCTCGGTTAAGATTAA
TCCCATGCAGCTCGGGGTGTGGTTTTCTCTCGGTTGTGCCTATTTGGCCTTGGAAGACTATCAAGGTTCAGCAAAGGCATTTCAGCGCTG
TGTGACTCTAGAACCCGATAATGCTGAAGCTTGGAACAATTTGTCAACTTCCTATATCCGATTAAAACAAAAAGTAAAAGCTTTTAGAAC
TTTACAAGAAGCTCTCAAGTGTAACTATGAACACTGGCAGATTTGGGAAAACTACATCCTCACCAGCACTGACGTTGGGGAATTTTCAGA
AGCCATTAAAGCTTATCACCGGCTCTTGGACTTACGTGACAAATACAAAGATGTTCAGGTCCTTAAAATTCTAGTCAGGGCAGTGATTGA
TGGGATGACTGATCGAAGTGGAGATGTTGCAACTGGCCTCAAAGGAAAGCTGCAGGAGTTATTTGGCAGAGTGACTTCAAGAGTGACAAA
TGATGGAGAAATCTGGAGGCTGTATGCCCACGTATATGGAAATGGGCAGAGTGAAAAGCCTGATGAAAATGAAAAGGCATTCCAGTGCCT
CTCAAAGGCATACAAGTGTGACACCCAGTCCAATTGTTGGGAGAAAGATATTACATCATTTAAGGAAGTTGTTCAAAGAGCCTTAGGACT
TGCACATGTGGCCATAAAATGCAGTAAAAACAAATCCAGTTCCCAAGAAGCTGTACAAATGCTTTCTTCTGTTCGACTCAATTTACGGGG
CTTGTTATCTAAAGCAAAGCAACTTTTTACAGATGTGGCAACTGGAGAAATGTCCAGGGAATTAGCTGATGACATAACAGCTATGGACAC
CTTAGTGACAGAGCTCCAAGACCTAAGCAACCAGTTTCGAAATCAGTATTGATTCTGCTGGAAGCAGATTCTGGAAAAGGTGCTTTCACC

>26262_26262_6_ELMOD3-TTC27_ELMOD3_chr2_85589383_ENST00000428955_TTC27_chr2_32927874_ENST00000317907_length(amino acids)=513AA_BP=43
MNEKSCSFHSKEELRDGQGERLSAGYSPSYDKDKSVLAFRGIPCLLSQPKFWAIQTSALILRTKLEKGSTRRVERAMRQTQALADQFEDK
TTSVLERLKIFYCCQVPPHWAIQRQLASLLFELGCTSSALQIFEKLEMWEDVVICYERAGQHGKAEEILRQELEKKETPSLYCLLGDVLG
DHSCYDKAWELSRYRSARAQRSKALLHLRNKEFQECVECFERSVKINPMQLGVWFSLGCAYLALEDYQGSAKAFQRCVTLEPDNAEAWNN
LSTSYIRLKQKVKAFRTLQEALKCNYEHWQIWENYILTSTDVGEFSEAIKAYHRLLDLRDKYKDVQVLKILVRAVIDGMTDRSGDVATGL
KGKLQELFGRVTSRVTNDGEIWRLYAHVYGNGQSEKPDENEKAFQCLSKAYKCDTQSNCWEKDITSFKEVVQRALGLAHVAIKCSKNKSS

--------------------------------------------------------------

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Fusion Gene PPI Analysis for ELMOD3-TTC27


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for ELMOD3-TTC27


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for ELMOD3-TTC27


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource