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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:EPB41L4A-SCN9A (FusionGDB2 ID:26859) |
Fusion Gene Summary for EPB41L4A-SCN9A |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: EPB41L4A-SCN9A | Fusion gene ID: 26859 | Hgene | Tgene | Gene symbol | EPB41L4A | SCN9A | Gene ID | 64097 | 6335 |
| Gene name | erythrocyte membrane protein band 4.1 like 4A | sodium voltage-gated channel alpha subunit 9 | |
| Synonyms | EPB41L4|NBL4 | ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP | |
| Cytomap | 5q22.1-q22.2 | 2q24.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | band 4.1-like protein 4Aerythrocyte protein band 4.1-like 4 | sodium channel protein type 9 subunit alphahNE-Naneuroendocrine sodium channelperipheral sodium channel 1sodium channel protein type IX subunit alphasodium channel, voltage-gated, type IX, alpha polypeptidesodium channel, voltage-gated, type IX, alp | |
| Modification date | 20200320 | 20200313 | |
| UniProtAcc | Q9HCS5 | . | |
| Ensembl transtripts involved in fusion gene | ENST00000261486, ENST00000507810, | ENST00000303354, ENST00000375387, ENST00000409435, ENST00000409672, | |
| Fusion gene scores | * DoF score | 10 X 9 X 8=720 | 5 X 4 X 4=80 |
| # samples | 11 | 5 | |
| ** MAII score | log2(11/720*10)=-2.71049338280502 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/80*10)=-0.678071905112638 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: EPB41L4A [Title/Abstract] AND SCN9A [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | EPB41L4A(111643083)-SCN9A(167108395), # samples:1 | ||
| Anticipated loss of major functional domain due to fusion event. | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Tgene | SCN9A | GO:0035725 | sodium ion transmembrane transport | 17145499 |
| Fusion gene breakpoints across EPB41L4A (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene breakpoints across SCN9A (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | LGG | TCGA-TQ-A7RM-01A | EPB41L4A | chr5 | 111643083 | - | SCN9A | chr2 | 167108395 | - |
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Fusion Gene ORF analysis for EPB41L4A-SCN9A |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000261486 | ENST00000303354 | EPB41L4A | chr5 | 111643083 | - | SCN9A | chr2 | 167108395 | - |
| In-frame | ENST00000261486 | ENST00000375387 | EPB41L4A | chr5 | 111643083 | - | SCN9A | chr2 | 167108395 | - |
| In-frame | ENST00000261486 | ENST00000409435 | EPB41L4A | chr5 | 111643083 | - | SCN9A | chr2 | 167108395 | - |
| In-frame | ENST00000261486 | ENST00000409672 | EPB41L4A | chr5 | 111643083 | - | SCN9A | chr2 | 167108395 | - |
| intron-3CDS | ENST00000507810 | ENST00000303354 | EPB41L4A | chr5 | 111643083 | - | SCN9A | chr2 | 167108395 | - |
| intron-3CDS | ENST00000507810 | ENST00000375387 | EPB41L4A | chr5 | 111643083 | - | SCN9A | chr2 | 167108395 | - |
| intron-3CDS | ENST00000507810 | ENST00000409435 | EPB41L4A | chr5 | 111643083 | - | SCN9A | chr2 | 167108395 | - |
| intron-3CDS | ENST00000507810 | ENST00000409672 | EPB41L4A | chr5 | 111643083 | - | SCN9A | chr2 | 167108395 | - |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000261486 | EPB41L4A | chr5 | 111643083 | - | ENST00000409672 | SCN9A | chr2 | 167108395 | - | 6584 | 481 | 256 | 3096 | 946 |
| ENST00000261486 | EPB41L4A | chr5 | 111643083 | - | ENST00000303354 | SCN9A | chr2 | 167108395 | - | 6573 | 481 | 256 | 3096 | 946 |
| ENST00000261486 | EPB41L4A | chr5 | 111643083 | - | ENST00000375387 | SCN9A | chr2 | 167108395 | - | 6573 | 481 | 256 | 3096 | 946 |
| ENST00000261486 | EPB41L4A | chr5 | 111643083 | - | ENST00000409435 | SCN9A | chr2 | 167108395 | - | 3097 | 481 | 256 | 3096 | 947 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000261486 | ENST00000409672 | EPB41L4A | chr5 | 111643083 | - | SCN9A | chr2 | 167108395 | - | 5.46E-05 | 0.9999454 |
| ENST00000261486 | ENST00000303354 | EPB41L4A | chr5 | 111643083 | - | SCN9A | chr2 | 167108395 | - | 5.51E-05 | 0.9999449 |
| ENST00000261486 | ENST00000375387 | EPB41L4A | chr5 | 111643083 | - | SCN9A | chr2 | 167108395 | - | 5.51E-05 | 0.9999449 |
| ENST00000261486 | ENST00000409435 | EPB41L4A | chr5 | 111643083 | - | SCN9A | chr2 | 167108395 | - | 0.000120975 | 0.999879 |
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Fusion Genomic Features for EPB41L4A-SCN9A |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
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| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for EPB41L4A-SCN9A |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr5:111643083/chr2:167108395) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| EPB41L4A | . |
| FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1889_1918 | 1117 | 1989.0 | Domain | Note=IQ | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1889_1918 | 1106 | 1978.0 | Domain | Note=IQ | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1393_1414 | 1117 | 1989.0 | Intramembrane | Pore-forming | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1684_1706 | 1117 | 1989.0 | Intramembrane | Pore-forming | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1393_1414 | 1106 | 1978.0 | Intramembrane | Pore-forming | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1684_1706 | 1106 | 1978.0 | Intramembrane | Pore-forming | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1180_1488 | 1117 | 1989.0 | Repeat | III | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1497_1795 | 1117 | 1989.0 | Repeat | IV | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1180_1488 | 1106 | 1978.0 | Repeat | III | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1497_1795 | 1106 | 1978.0 | Repeat | IV | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1212_1224 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1244_1257 | 1117 | 1989.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1277_1284 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1304_1320 | 1117 | 1989.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1341_1392 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1415_1431 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1454_1516 | 1117 | 1989.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1535_1545 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1565_1576 | 1117 | 1989.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1595_1607 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1625_1643 | 1117 | 1989.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1662_1683 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1707_1736 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1760_1988 | 1117 | 1989.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1212_1224 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1244_1257 | 1106 | 1978.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1277_1284 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1304_1320 | 1106 | 1978.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1341_1392 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1415_1431 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1454_1516 | 1106 | 1978.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1535_1545 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1565_1576 | 1106 | 1978.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1595_1607 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1625_1643 | 1106 | 1978.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1662_1683 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1707_1736 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1760_1988 | 1106 | 1978.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1194_1211 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS1 of repeat III | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1225_1243 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS2 of repeat III | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1258_1276 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS3 of repeat III | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1285_1303 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS4 of repeat III | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1321_1340 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS5 of repeat III | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1432_1453 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS6 of repeat III | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1517_1534 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS1 of repeat IV | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1546_1564 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS2 of repeat IV | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1577_1594 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS3 of repeat IV | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1608_1624 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS4 of repeat IV | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1644_1661 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS5 of repeat IV | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1737_1759 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS6 of repeat IV | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1194_1211 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS1 of repeat III | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1225_1243 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS2 of repeat III | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1258_1276 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS3 of repeat III | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1285_1303 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS4 of repeat III | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1321_1340 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS5 of repeat III | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1432_1453 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS6 of repeat III | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1517_1534 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS1 of repeat IV | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1546_1564 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS2 of repeat IV | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1577_1594 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS3 of repeat IV | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1608_1624 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS4 of repeat IV | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1644_1661 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS5 of repeat IV | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1737_1759 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS6 of repeat IV |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | EPB41L4A | chr5:111643083 | chr2:167108395 | ENST00000261486 | - | 2 | 23 | 11_299 | 68 | 687.0 | Domain | FERM |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 347_371 | 1117 | 1989.0 | Intramembrane | Pore-forming | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 913_933 | 1117 | 1989.0 | Intramembrane | Pore-forming | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 347_371 | 1106 | 1978.0 | Intramembrane | Pore-forming | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 913_933 | 1106 | 1978.0 | Intramembrane | Pore-forming | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 112_410 | 1117 | 1989.0 | Repeat | I | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 726_989 | 1117 | 1989.0 | Repeat | II | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 112_410 | 1106 | 1978.0 | Repeat | I | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 726_989 | 1106 | 1978.0 | Repeat | II | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 146_152 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 174_187 | 1117 | 1989.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 1_126 | 1117 | 1989.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 206_211 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 229_247 | 1117 | 1989.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 268_346 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 372_378 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 400_744 | 1117 | 1989.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 764_774 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 795_808 | 1117 | 1989.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 829_830 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 849_864 | 1117 | 1989.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 884_912 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 934_946 | 1117 | 1989.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 968_1193 | 1117 | 1989.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 146_152 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 174_187 | 1106 | 1978.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 1_126 | 1106 | 1978.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 206_211 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 229_247 | 1106 | 1978.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 268_346 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 372_378 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 400_744 | 1106 | 1978.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 764_774 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 795_808 | 1106 | 1978.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 829_830 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 849_864 | 1106 | 1978.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 884_912 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 934_946 | 1106 | 1978.0 | Topological domain | Extracellular | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 968_1193 | 1106 | 1978.0 | Topological domain | Cytoplasmic | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 127_145 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS1 of repeat I | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 153_173 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS2 of repeat I | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 188_205 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS3 of repeat I | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 212_228 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS4 of repeat I | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 248_267 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS5 of repeat I | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 379_399 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS6 of repeat I | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 745_763 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS1 of repeat II | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 775_794 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS2 of repeat II | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 809_828 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS3 of repeat II | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 831_848 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS4 of repeat II | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 865_883 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS5 of repeat II | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409435 | 15 | 26 | 947_967 | 1117 | 1989.0 | Transmembrane | Helical%3B Name%3DS6 of repeat II | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 127_145 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS1 of repeat I | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 153_173 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS2 of repeat I | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 188_205 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS3 of repeat I | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 212_228 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS4 of repeat I | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 248_267 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS5 of repeat I | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 379_399 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS6 of repeat I | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 745_763 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS1 of repeat II | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 775_794 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS2 of repeat II | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 809_828 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS3 of repeat II | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 831_848 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS4 of repeat II | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 865_883 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS5 of repeat II | |
| Tgene | SCN9A | chr5:111643083 | chr2:167108395 | ENST00000409672 | 16 | 27 | 947_967 | 1106 | 1978.0 | Transmembrane | Helical%3B Name%3DS6 of repeat II |
Top |
Fusion Gene Sequence for EPB41L4A-SCN9A |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >26859_26859_1_EPB41L4A-SCN9A_EPB41L4A_chr5_111643083_ENST00000261486_SCN9A_chr2_167108395_ENST00000303354_length(transcript)=6573nt_BP=481nt CGCAGGATGCGCGGGGACGCGCCACCGCCCTCCGCGCCCAGTTCCGCCGGCGCTTCCCCGGCGGCTCCCGGGCGCTGACTCTCCCGGGCT TTTCCGCCTTTCTCGCTCCCGCCCCGCCGGGCGGTTCGGCGGCCGGTCCCCGGACCCCGCCGGGAGCTGCTCGTCTCACCCTCGCCACGG CGCGGACAATAAATTAATGCATCGCGCTTGAGTGGAGGGGGCGGCTGGGCGCCTCGGTGGTAGCTTTCTCTCCTGGCTGGAGACGACCAC AACCGACATGGGCTGTTTCTGCGCTGTTCCGGAAGAATTTTACTGCGAAGTTTTGCTCCTGGATGAATCCAAGTTAACCCTTACCACCCA GCAGCAGGGCATCAAGAAGTCAACGAAAGGTTCCGTTGTCCTTGACCACGTATTCCATCACGTAAACCTTGTGGAGATAGATTATTTTGG GCTACGTTACTGTGACAGAAGCCATCAGACGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACCCTTTGCCTGGAGA AGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGGTTGTGTATGGAGGTTCTCATGCTGCCA AGTTAACATAGAGTCAGGGAAAGGAAAAATCTGGTGGAACATCAGGAAAACCTGCTACAAGATTGTTGAACACAGTTGGTTTGAAAGCTT CATTGTCCTCATGATCCTGCTCAGCAGTGGTGCCCTGGCTTTTGAAGATATTTATATTGAAAGGAAAAAGACCATTAAGATTATCCTGGA GTATGCAGACAAGATCTTCACTTACATCTTCATTCTGGAAATGCTTCTAAAATGGATAGCATATGGTTATAAAACATATTTCACCAATGC CTGGTGTTGGCTGGATTTCCTAATTGTTGATGTTTCTTTGGTTACTTTAGTGGCAAACACTCTTGGCTACTCAGATCTTGGCCCCATTAA ATCCCTTCGGACACTGAGAGCTTTAAGACCTCTAAGAGCCTTATCTAGATTTGAAGGAATGAGGGTCGTTGTGAATGCACTCATAGGAGC AATTCCTTCCATCATGAATGTGCTACTTGTGTGTCTTATATTCTGGCTGATATTCAGCATCATGGGAGTAAATTTGTTTGCTGGCAAGTT CTATGAGTGTATTAACACCACAGATGGGTCACGGTTTCCTGCAAGTCAAGTTCCAAATCGTTCCGAATGTTTTGCCCTTATGAATGTTAG TCAAAATGTGCGATGGAAAAACCTGAAAGTGAACTTTGATAATGTCGGACTTGGTTACCTATCTCTGCTTCAAGTTGCAACTTTTAAGGG ATGGACGATTATTATGTATGCAGCAGTGGATTCTGTTAATGTAGACAAGCAGCCCAAATATGAATATAGCCTCTACATGTATATTTATTT TGTCGTCTTTATCATCTTTGGGTCATTCTTCACTTTGAACTTGTTCATTGGTGTCATCATAGATAATTTCAACCAACAGAAAAAGAAGCT TGGAGGTCAAGACATCTTTATGACAGAAGAACAGAAGAAATACTATAATGCAATGAAAAAGCTGGGGTCCAAGAAGCCACAAAAGCCAAT TCCTCGACCAGGGAACAAAATCCAAGGATGTATATTTGACCTAGTGACAAATCAAGCCTTTGATATTAGTATCATGGTTCTTATCTGTCT CAACATGGTAACCATGATGGTAGAAAAGGAGGGTCAAAGTCAACATATGACTGAAGTTTTATATTGGATAAATGTGGTTTTTATAATCCT TTTCACTGGAGAATGTGTGCTAAAACTGATCTCCCTCAGACACTACTACTTCACTGTAGGATGGAATATTTTTGATTTTGTGGTTGTGAT TATCTCCATTGTAGGTATGTTTCTAGCTGATTTGATTGAAACGTATTTTGTGTCCCCTACCCTGTTCCGAGTGATCCGTCTTGCCAGGAT TGGCCGAATCCTACGTCTAGTCAAAGGAGCAAAGGGGATCCGCACGCTGCTCTTTGCTTTGATGATGTCCCTTCCTGCGTTGTTTAACAT CGGCCTCCTGCTCTTCCTGGTCATGTTCATCTACGCCATCTTTGGAATGTCCAACTTTGCCTATGTTAAAAAGGAAGATGGAATTAATGA CATGTTCAATTTTGAGACCTTTGGCAACAGTATGATTTGCCTGTTCCAAATTACAACCTCTGCTGGCTGGGATGGATTGCTAGCACCTAT TCTTAACAGTAAGCCACCCGACTGTGACCCAAAAAAAGTTCATCCTGGAAGTTCAGTTGAAGGAGACTGTGGTAACCCATCTGTTGGAAT ATTCTACTTTGTTAGTTATATCATCATATCCTTCCTGGTTGTGGTGAACATGTACATTGCAGTCATACTGGAGAATTTTAGTGTTGCCAC TGAAGAAAGTACTGAACCTCTGAGTGAGGATGACTTTGAGATGTTCTATGAGGTTTGGGAGAAGTTTGATCCCGATGCGACCCAGTTTAT AGAGTTCTCTAAACTCTCTGATTTTGCAGCTGCCCTGGATCCTCCTCTTCTCATAGCAAAACCCAACAAAGTCCAGCTCATTGCCATGGA TCTGCCCATGGTTAGTGGTGACCGGATCCATTGTCTTGACATCTTATTTGCTTTTACAAAGCGTGTTTTGGGTGAGAGTGGGGAGATGGA TTCTCTTCGTTCACAGATGGAAGAAAGGTTCATGTCTGCAAATCCTTCCAAAGTGTCCTATGAACCCATCACAACCACACTAAAACGGAA ACAAGAGGATGTGTCTGCTACTGTCATTCAGCGTGCTTATAGACGTTACCGCTTAAGGCAAAATGTCAAAAATATATCAAGTATATACAT AAAAGATGGAGACAGAGATGATGATTTACTCAATAAAAAAGATATGGCTTTTGATAATGTTAATGAGAACTCAAGTCCAGAAAAAACAGA TGCCACTTCATCCACCACCTCTCCACCTTCATATGATAGTGTAACAAAGCCAGACAAAGAGAAATATGAACAAGACAGAACAGAAAAGGA AGACAAAGGGAAAGACAGCAAGGAAAGCAAAAAATAGAGCTTCATTTTTGATATATTGTTTACAGCCTGTGAAAGTGATTTATTTGTGTT AATAAAACTCTTTTGAGGAAGTCTATGCCAAAATCCTTTTTATCAAAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAG AAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATTCTTTAAGAATCGTAAGAGAACTCTGTAGGAATTATTGATTATAGC ATACAAAAGTGATTCAGTTTTTTGGTTTTTAATAAATCAGAAGACCATGTAGAAAACTTTTACATCTGCCTTGTCATCTTTTCACAGGAT TGTAATTAGTCTTGTTTCCCATGTAAATAAACAACACACGCATACAGAAAAATCTATTATTTATCTATTATTTGGAAATCAACAAAAGTA TTTGCCTTGGCTTTGCAATGAAATGCTTGATAGAAGTAATGGACATTAGTTATGAATGTTTAGTTAAAATGCATTATTAGGGAGCTTGAC TTTTTATCAATGTACAGAGGTTATTCTATATTTTGAGGTGCTTAAATTTATTCTACATTGCATCAGAACCAATTTATATGTGCCTATAAA ATGCCATGGGATTAAAAATATATGTAGGCTATTCATTTCTACAAATGTTTTTCATTCATCTTGACTCACATGCCAACAAGGATAAGACTT ACCTTTAGAGTATTGTGTTTCATAGCCTTTCTTCTTTCATATCCCTTTTTGTTCATAGAATAACCACAGAACTTGAAAAATTATTCTAAG TACATATTACACTCCTCAAAAAAAACAAAGATAACTGAGAAAAAAGTTATTGACAGAAGTTCTATTTGCTATTATTTACATAGCCTAACA TTTGACTGTGCTGCCCAAAATACTGATAATAGTCTCTTAAACTCTTTTGTCAAATTTTCCTGCTTTCTTATGCAGTATTGTTTAGTCATC CTTTCGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCAGATAATAACTTGGG CACAGTATTTATTGCATCACTTGTATACAATCCCGTGTTTGGCAAGCTTTCAAATCATGTAATATGACAGACTTTACACAGATATGTGTT TAGTATGAATAAAAAAGCATTGAAATAGGGATTCTTGCCAACTTGCTCTCTTGCCACCAACTTACTTTCCTAAATTATGGAAGTAATCTT TTTTGGATATACTTCAATGTATACAATGAGGAAGATGTCACCTTCTCCTTAAAATTCTATGATGTGAAATATATTTTGCCTCAATCAACA CAGTACCATGGGCTTCTAATTTATCAAGCACATATTCATTTTGCATTAGCTGTAGACATCTAGTTTTTTGAAAACACCTATTAATAGTAA TTTGAAAAGAAATAACCATAATGCTTTTTTTCGTGAGTTTATTTCAGGAATATGAGATCTTTCTTCTATAAAGTTATTCATGCACAGGCA AAAATTGAGCTACACAGGTAGAATGTAGTTTTACTTAGAAGATTTTTGTGGGAGGTTTTGAAGCAAATATATAAAACAACTTTCACTAAT TTGCTTTCCATATTTAAAAAATAATAAATTACATTTATATAATAAATGTTTAAAGCACATATTTTTTGTTGTTCTGGCAATTTAAAAAGA AAGAGGATTTAAACGTACCTATAGAAACAAAGATTTATGGTTAAAGAATGAGATCAGAAGTCTAGAATGTTTTTAAATTGTGATATATTT TACAACATCCGTTATTACTTTGAGACATTTGTCCTAATCTACGTATAAAACTCAATCTAGGGCTAAAGATTCTTTATACCATCTTAGGTT CATTCATCTTAGGCTATTTGAACCACTTTTTAATTTAATATGAAAGACACCATGCAGTGTTTTCCGAGACTACATAGATCATTTTATCAC ATACCTACCAAGCCTGTTGGAAATAGGTTTTGATAATTTAAGTAGGGACCTATACAAAATATATTACATTTATCAGATTTTTAAATACAT TCAATTAAGAATTTAACATCACCTTAAATTTGAATTCAATCTACCGTTATTTCAAACTCACAAATATAACTGCATTATGAATACTTACAT AATGTAGTAAGACAAGATGTTTGACAGGTTCGTGTGTAATTTTCTATTAATGTTTTTACATTGCCTTGTTTTTATGTAAAATAAAAAATA TGGGCAACTGGTTTGTTAACAACACAATTTCTTCTTAGCATTTCAAAAATATATATAAAGTTGTTCTTTTTCCTATTTCATGAACTATGT TTTTTTTTAAAATAACATGGTTAAGTTTTATATATATTTACGTTTGTTTCAGGAATGTCTACTTGTGACTTTTTATCAATTAAAAATAAT ATTTGGAAGAAAGAGCTTATTAAGTATAAGCTTGAAGTAAAATTAGACCTCTCTTTCCATGTAGATTACTGTTTGTACTGATGGTTTCAC CCTTCAGAAGGCACTGTCATATTAATATTTAAATTTTATAATCGCTGAACTTATTACACCCAACAATACAGAAAGGCAGTTACACTGAAG AACTTAACTTAGAATAAAATGGAAGCAAACAGGTTTTCTAAAAACTTTTTTAAGTGACCAGGTCTCGCTCTGTCACCCAGGCTAGAGTGC AATGGCATGATCATAGCTCTCTGCAGCCTCAACTCTGGGCTCAAGCAACCCTCCTGCCTCAGCCTCCCAAGTAGCTAAGACTACAGGTAC ATGCCACCATGCCTGGCTAATATTTAAATTTTTGTAGATAAGGGGTCTTGCTATGTTGCCCAGGCTAGTCTCAAACTCCTGGCTTCAAGT GTTCCTACTGTCATGACCTGCCAACATGCTGGGGTTACAGGCATGAGCCACCATGCCCCAAACAGGTTTGAACACAAATCTTTCGGATGA AAATTAGAGAACCTAATTTTAGCTTTTTGATAGTTACCTAGTTTGCAAAAGATTTGGGTGACTTGTGAGCTGTTTTTAAATGCTGATTGT TGAACATCACAACCCAAAATACTTAGCATGATTTTATAGAGTTTTGATAGCTTTATTAAAAAGAGTGAAAATAAAATGCATATGTAAATA AAGCAGTTCTAAATAGCTATTTCAGAGAAATGTTAATAGAAGTGCTGAAAGAAGGGCCAACTAAATTAGGATGGCCAGGGAATTGGCCTG GGTTTAGGACCTATGTATGAAGGCCACCAATTTTTTAAAAATATCTGTGGTTTATTATGTTATTATCTTCTTGAGGAAAACAATCAAGAA TTGCTTCATGAAAATAAATAAATAGCCATGAATATCATAAAGCTGTTTACATAGGATTCTTTACAAATTTCATAGATCTATGAATGCTCA AAATGTTTGAGTTTGCCATAAATTATATTGTAGTTATATTGTAGTTATACTTGAGACTGACACATTGTAATATAATCTAAGAATAAAAGT >26859_26859_1_EPB41L4A-SCN9A_EPB41L4A_chr5_111643083_ENST00000261486_SCN9A_chr2_167108395_ENST00000303354_length(amino acids)=946AA_BP=75 METTTTDMGCFCAVPEEFYCEVLLLDESKLTLTTQQQGIKKSTKGSVVLDHVFHHVNLVEIDYFGLRYCDRSHQTRLNRSSSSECSTVDN PLPGEGEEAEAEPMNSDEPEACFTDGCVWRFSCCQVNIESGKGKIWWNIRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTI KIILEYADKIFTYIFILEMLLKWIAYGYKTYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYECINTTDGSRFPASQVPNRSECFALMNVSQNVRWKNLKVNFDNVGLGYLSLLQV ATFKGWTIIMYAAVDSVNVDKQPKYEYSLYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKK PQKPIPRPGNKIQGCIFDLVTNQAFDISIMVLICLNMVTMMVEKEGQSQHMTEVLYWINVVFIILFTGECVLKLISLRHYYFTVGWNIFD FVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKE DGINDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPKKVHPGSSVEGDCGNPSVGIFYFVSYIIISFLVVVNMYIAVILEN FSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGE SGEMDSLRSQMEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGDRDDDLLNKKDMAFDNVNENSS -------------------------------------------------------------- >26859_26859_2_EPB41L4A-SCN9A_EPB41L4A_chr5_111643083_ENST00000261486_SCN9A_chr2_167108395_ENST00000375387_length(transcript)=6573nt_BP=481nt CGCAGGATGCGCGGGGACGCGCCACCGCCCTCCGCGCCCAGTTCCGCCGGCGCTTCCCCGGCGGCTCCCGGGCGCTGACTCTCCCGGGCT TTTCCGCCTTTCTCGCTCCCGCCCCGCCGGGCGGTTCGGCGGCCGGTCCCCGGACCCCGCCGGGAGCTGCTCGTCTCACCCTCGCCACGG CGCGGACAATAAATTAATGCATCGCGCTTGAGTGGAGGGGGCGGCTGGGCGCCTCGGTGGTAGCTTTCTCTCCTGGCTGGAGACGACCAC AACCGACATGGGCTGTTTCTGCGCTGTTCCGGAAGAATTTTACTGCGAAGTTTTGCTCCTGGATGAATCCAAGTTAACCCTTACCACCCA GCAGCAGGGCATCAAGAAGTCAACGAAAGGTTCCGTTGTCCTTGACCACGTATTCCATCACGTAAACCTTGTGGAGATAGATTATTTTGG GCTACGTTACTGTGACAGAAGCCATCAGACGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACCCTTTGCCTGGAGA AGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGGTTGTGTATGGAGGTTCTCATGCTGCCA AGTTAACATAGAGTCAGGGAAAGGAAAAATCTGGTGGAACATCAGGAAAACCTGCTACAAGATTGTTGAACACAGTTGGTTTGAAAGCTT CATTGTCCTCATGATCCTGCTCAGCAGTGGTGCCCTGGCTTTTGAAGATATTTATATTGAAAGGAAAAAGACCATTAAGATTATCCTGGA GTATGCAGACAAGATCTTCACTTACATCTTCATTCTGGAAATGCTTCTAAAATGGATAGCATATGGTTATAAAACATATTTCACCAATGC CTGGTGTTGGCTGGATTTCCTAATTGTTGATGTTTCTTTGGTTACTTTAGTGGCAAACACTCTTGGCTACTCAGATCTTGGCCCCATTAA ATCCCTTCGGACACTGAGAGCTTTAAGACCTCTAAGAGCCTTATCTAGATTTGAAGGAATGAGGGTCGTTGTGAATGCACTCATAGGAGC AATTCCTTCCATCATGAATGTGCTACTTGTGTGTCTTATATTCTGGCTGATATTCAGCATCATGGGAGTAAATTTGTTTGCTGGCAAGTT CTATGAGTGTATTAACACCACAGATGGGTCACGGTTTCCTGCAAGTCAAGTTCCAAATCGTTCCGAATGTTTTGCCCTTATGAATGTTAG TCAAAATGTGCGATGGAAAAACCTGAAAGTGAACTTTGATAATGTCGGACTTGGTTACCTATCTCTGCTTCAAGTTGCAACTTTTAAGGG ATGGACGATTATTATGTATGCAGCAGTGGATTCTGTTAATGTAGACAAGCAGCCCAAATATGAATATAGCCTCTACATGTATATTTATTT TGTCGTCTTTATCATCTTTGGGTCATTCTTCACTTTGAACTTGTTCATTGGTGTCATCATAGATAATTTCAACCAACAGAAAAAGAAGCT TGGAGGTCAAGACATCTTTATGACAGAAGAACAGAAGAAATACTATAATGCAATGAAAAAGCTGGGGTCCAAGAAGCCACAAAAGCCAAT TCCTCGACCAGGGAACAAAATCCAAGGATGTATATTTGACCTAGTGACAAATCAAGCCTTTGATATTAGTATCATGGTTCTTATCTGTCT CAACATGGTAACCATGATGGTAGAAAAGGAGGGTCAAAGTCAACATATGACTGAAGTTTTATATTGGATAAATGTGGTTTTTATAATCCT TTTCACTGGAGAATGTGTGCTAAAACTGATCTCCCTCAGACACTACTACTTCACTGTAGGATGGAATATTTTTGATTTTGTGGTTGTGAT TATCTCCATTGTAGGTATGTTTCTAGCTGATTTGATTGAAACGTATTTTGTGTCCCCTACCCTGTTCCGAGTGATCCGTCTTGCCAGGAT TGGCCGAATCCTACGTCTAGTCAAAGGAGCAAAGGGGATCCGCACGCTGCTCTTTGCTTTGATGATGTCCCTTCCTGCGTTGTTTAACAT CGGCCTCCTGCTCTTCCTGGTCATGTTCATCTACGCCATCTTTGGAATGTCCAACTTTGCCTATGTTAAAAAGGAAGATGGAATTAATGA CATGTTCAATTTTGAGACCTTTGGCAACAGTATGATTTGCCTGTTCCAAATTACAACCTCTGCTGGCTGGGATGGATTGCTAGCACCTAT TCTTAACAGTAAGCCACCCGACTGTGACCCAAAAAAAGTTCATCCTGGAAGTTCAGTTGAAGGAGACTGTGGTAACCCATCTGTTGGAAT ATTCTACTTTGTTAGTTATATCATCATATCCTTCCTGGTTGTGGTGAACATGTACATTGCAGTCATACTGGAGAATTTTAGTGTTGCCAC TGAAGAAAGTACTGAACCTCTGAGTGAGGATGACTTTGAGATGTTCTATGAGGTTTGGGAGAAGTTTGATCCCGATGCGACCCAGTTTAT AGAGTTCTCTAAACTCTCTGATTTTGCAGCTGCCCTGGATCCTCCTCTTCTCATAGCAAAACCCAACAAAGTCCAGCTCATTGCCATGGA TCTGCCCATGGTTAGTGGTGACCGGATCCATTGTCTTGACATCTTATTTGCTTTTACAAAGCGTGTTTTGGGTGAGAGTGGGGAGATGGA TTCTCTTCGTTCACAGATGGAAGAAAGGTTCATGTCTGCAAATCCTTCCAAAGTGTCCTATGAACCCATCACAACCACACTAAAACGGAA ACAAGAGGATGTGTCTGCTACTGTCATTCAGCGTGCTTATAGACGTTACCGCTTAAGGCAAAATGTCAAAAATATATCAAGTATATACAT AAAAGATGGAGACAGAGATGATGATTTACTCAATAAAAAAGATATGGCTTTTGATAATGTTAATGAGAACTCAAGTCCAGAAAAAACAGA TGCCACTTCATCCACCACCTCTCCACCTTCATATGATAGTGTAACAAAGCCAGACAAAGAGAAATATGAACAAGACAGAACAGAAAAGGA AGACAAAGGGAAAGACAGCAAGGAAAGCAAAAAATAGAGCTTCATTTTTGATATATTGTTTACAGCCTGTGAAAGTGATTTATTTGTGTT AATAAAACTCTTTTGAGGAAGTCTATGCCAAAATCCTTTTTATCAAAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAG AAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATTCTTTAAGAATCGTAAGAGAACTCTGTAGGAATTATTGATTATAGC ATACAAAAGTGATTCAGTTTTTTGGTTTTTAATAAATCAGAAGACCATGTAGAAAACTTTTACATCTGCCTTGTCATCTTTTCACAGGAT TGTAATTAGTCTTGTTTCCCATGTAAATAAACAACACACGCATACAGAAAAATCTATTATTTATCTATTATTTGGAAATCAACAAAAGTA TTTGCCTTGGCTTTGCAATGAAATGCTTGATAGAAGTAATGGACATTAGTTATGAATGTTTAGTTAAAATGCATTATTAGGGAGCTTGAC TTTTTATCAATGTACAGAGGTTATTCTATATTTTGAGGTGCTTAAATTTATTCTACATTGCATCAGAACCAATTTATATGTGCCTATAAA ATGCCATGGGATTAAAAATATATGTAGGCTATTCATTTCTACAAATGTTTTTCATTCATCTTGACTCACATGCCAACAAGGATAAGACTT ACCTTTAGAGTATTGTGTTTCATAGCCTTTCTTCTTTCATATCCCTTTTTGTTCATAGAATAACCACAGAACTTGAAAAATTATTCTAAG TACATATTACACTCCTCAAAAAAAACAAAGATAACTGAGAAAAAAGTTATTGACAGAAGTTCTATTTGCTATTATTTACATAGCCTAACA TTTGACTGTGCTGCCCAAAATACTGATAATAGTCTCTTAAACTCTTTTGTCAAATTTTCCTGCTTTCTTATGCAGTATTGTTTAGTCATC CTTTCGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCAGATAATAACTTGGG CACAGTATTTATTGCATCACTTGTATACAATCCCGTGTTTGGCAAGCTTTCAAATCATGTAATATGACAGACTTTACACAGATATGTGTT TAGTATGAATAAAAAAGCATTGAAATAGGGATTCTTGCCAACTTGCTCTCTTGCCACCAACTTACTTTCCTAAATTATGGAAGTAATCTT TTTTGGATATACTTCAATGTATACAATGAGGAAGATGTCACCTTCTCCTTAAAATTCTATGATGTGAAATATATTTTGCCTCAATCAACA CAGTACCATGGGCTTCTAATTTATCAAGCACATATTCATTTTGCATTAGCTGTAGACATCTAGTTTTTTGAAAACACCTATTAATAGTAA TTTGAAAAGAAATAACCATAATGCTTTTTTTCGTGAGTTTATTTCAGGAATATGAGATCTTTCTTCTATAAAGTTATTCATGCACAGGCA AAAATTGAGCTACACAGGTAGAATGTAGTTTTACTTAGAAGATTTTTGTGGGAGGTTTTGAAGCAAATATATAAAACAACTTTCACTAAT TTGCTTTCCATATTTAAAAAATAATAAATTACATTTATATAATAAATGTTTAAAGCACATATTTTTTGTTGTTCTGGCAATTTAAAAAGA AAGAGGATTTAAACGTACCTATAGAAACAAAGATTTATGGTTAAAGAATGAGATCAGAAGTCTAGAATGTTTTTAAATTGTGATATATTT TACAACATCCGTTATTACTTTGAGACATTTGTCCTAATCTACGTATAAAACTCAATCTAGGGCTAAAGATTCTTTATACCATCTTAGGTT CATTCATCTTAGGCTATTTGAACCACTTTTTAATTTAATATGAAAGACACCATGCAGTGTTTTCCGAGACTACATAGATCATTTTATCAC ATACCTACCAAGCCTGTTGGAAATAGGTTTTGATAATTTAAGTAGGGACCTATACAAAATATATTACATTTATCAGATTTTTAAATACAT TCAATTAAGAATTTAACATCACCTTAAATTTGAATTCAATCTACCGTTATTTCAAACTCACAAATATAACTGCATTATGAATACTTACAT AATGTAGTAAGACAAGATGTTTGACAGGTTCGTGTGTAATTTTCTATTAATGTTTTTACATTGCCTTGTTTTTATGTAAAATAAAAAATA TGGGCAACTGGTTTGTTAACAACACAATTTCTTCTTAGCATTTCAAAAATATATATAAAGTTGTTCTTTTTCCTATTTCATGAACTATGT TTTTTTTTAAAATAACATGGTTAAGTTTTATATATATTTACGTTTGTTTCAGGAATGTCTACTTGTGACTTTTTATCAATTAAAAATAAT ATTTGGAAGAAAGAGCTTATTAAGTATAAGCTTGAAGTAAAATTAGACCTCTCTTTCCATGTAGATTACTGTTTGTACTGATGGTTTCAC CCTTCAGAAGGCACTGTCATATTAATATTTAAATTTTATAATCGCTGAACTTATTACACCCAACAATACAGAAAGGCAGTTACACTGAAG AACTTAACTTAGAATAAAATGGAAGCAAACAGGTTTTCTAAAAACTTTTTTAAGTGACCAGGTCTCGCTCTGTCACCCAGGCTAGAGTGC AATGGCATGATCATAGCTCTCTGCAGCCTCAACTCTGGGCTCAAGCAACCCTCCTGCCTCAGCCTCCCAAGTAGCTAAGACTACAGGTAC ATGCCACCATGCCTGGCTAATATTTAAATTTTTGTAGATAAGGGGTCTTGCTATGTTGCCCAGGCTAGTCTCAAACTCCTGGCTTCAAGT GTTCCTACTGTCATGACCTGCCAACATGCTGGGGTTACAGGCATGAGCCACCATGCCCCAAACAGGTTTGAACACAAATCTTTCGGATGA AAATTAGAGAACCTAATTTTAGCTTTTTGATAGTTACCTAGTTTGCAAAAGATTTGGGTGACTTGTGAGCTGTTTTTAAATGCTGATTGT TGAACATCACAACCCAAAATACTTAGCATGATTTTATAGAGTTTTGATAGCTTTATTAAAAAGAGTGAAAATAAAATGCATATGTAAATA AAGCAGTTCTAAATAGCTATTTCAGAGAAATGTTAATAGAAGTGCTGAAAGAAGGGCCAACTAAATTAGGATGGCCAGGGAATTGGCCTG GGTTTAGGACCTATGTATGAAGGCCACCAATTTTTTAAAAATATCTGTGGTTTATTATGTTATTATCTTCTTGAGGAAAACAATCAAGAA TTGCTTCATGAAAATAAATAAATAGCCATGAATATCATAAAGCTGTTTACATAGGATTCTTTACAAATTTCATAGATCTATGAATGCTCA AAATGTTTGAGTTTGCCATAAATTATATTGTAGTTATATTGTAGTTATACTTGAGACTGACACATTGTAATATAATCTAAGAATAAAAGT >26859_26859_2_EPB41L4A-SCN9A_EPB41L4A_chr5_111643083_ENST00000261486_SCN9A_chr2_167108395_ENST00000375387_length(amino acids)=946AA_BP=75 METTTTDMGCFCAVPEEFYCEVLLLDESKLTLTTQQQGIKKSTKGSVVLDHVFHHVNLVEIDYFGLRYCDRSHQTRLNRSSSSECSTVDN PLPGEGEEAEAEPMNSDEPEACFTDGCVWRFSCCQVNIESGKGKIWWNIRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTI KIILEYADKIFTYIFILEMLLKWIAYGYKTYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYECINTTDGSRFPASQVPNRSECFALMNVSQNVRWKNLKVNFDNVGLGYLSLLQV ATFKGWTIIMYAAVDSVNVDKQPKYEYSLYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKK PQKPIPRPGNKIQGCIFDLVTNQAFDISIMVLICLNMVTMMVEKEGQSQHMTEVLYWINVVFIILFTGECVLKLISLRHYYFTVGWNIFD FVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKE DGINDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPKKVHPGSSVEGDCGNPSVGIFYFVSYIIISFLVVVNMYIAVILEN FSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGE SGEMDSLRSQMEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGDRDDDLLNKKDMAFDNVNENSS -------------------------------------------------------------- >26859_26859_3_EPB41L4A-SCN9A_EPB41L4A_chr5_111643083_ENST00000261486_SCN9A_chr2_167108395_ENST00000409435_length(transcript)=3097nt_BP=481nt CGCAGGATGCGCGGGGACGCGCCACCGCCCTCCGCGCCCAGTTCCGCCGGCGCTTCCCCGGCGGCTCCCGGGCGCTGACTCTCCCGGGCT TTTCCGCCTTTCTCGCTCCCGCCCCGCCGGGCGGTTCGGCGGCCGGTCCCCGGACCCCGCCGGGAGCTGCTCGTCTCACCCTCGCCACGG CGCGGACAATAAATTAATGCATCGCGCTTGAGTGGAGGGGGCGGCTGGGCGCCTCGGTGGTAGCTTTCTCTCCTGGCTGGAGACGACCAC AACCGACATGGGCTGTTTCTGCGCTGTTCCGGAAGAATTTTACTGCGAAGTTTTGCTCCTGGATGAATCCAAGTTAACCCTTACCACCCA GCAGCAGGGCATCAAGAAGTCAACGAAAGGTTCCGTTGTCCTTGACCACGTATTCCATCACGTAAACCTTGTGGAGATAGATTATTTTGG GCTACGTTACTGTGACAGAAGCCATCAGACGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACCCTTTGCCTGGAGA AGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGGTTGTGTATGGAGGTTCTCATGCTGCCA AGTTAACATAGAGTCAGGGAAAGGAAAAATCTGGTGGAACATCAGGAAAACCTGCTACAAGATTGTTGAACACAGTTGGTTTGAAAGCTT CATTGTCCTCATGATCCTGCTCAGCAGTGGTGCCCTGGCTTTTGAAGATATTTATATTGAAAGGAAAAAGACCATTAAGATTATCCTGGA GTATGCAGACAAGATCTTCACTTACATCTTCATTCTGGAAATGCTTCTAAAATGGATAGCATATGGTTATAAAACATATTTCACCAATGC CTGGTGTTGGCTGGATTTCCTAATTGTTGATGTTTCTTTGGTTACTTTAGTGGCAAACACTCTTGGCTACTCAGATCTTGGCCCCATTAA ATCCCTTCGGACACTGAGAGCTTTAAGACCTCTAAGAGCCTTATCTAGATTTGAAGGAATGAGGGTCGTTGTGAATGCACTCATAGGAGC AATTCCTTCCATCATGAATGTGCTACTTGTGTGTCTTATATTCTGGCTGATATTCAGCATCATGGGAGTAAATTTGTTTGCTGGCAAGTT CTATGAGTGTATTAACACCACAGATGGGTCACGGTTTCCTGCAAGTCAAGTTCCAAATCGTTCCGAATGTTTTGCCCTTATGAATGTTAG TCAAAATGTGCGATGGAAAAACCTGAAAGTGAACTTTGATAATGTCGGACTTGGTTACCTATCTCTGCTTCAAGTTGCAACTTTTAAGGG ATGGACGATTATTATGTATGCAGCAGTGGATTCTGTTAATGTAGACAAGCAGCCCAAATATGAATATAGCCTCTACATGTATATTTATTT TGTCGTCTTTATCATCTTTGGGTCATTCTTCACTTTGAACTTGTTCATTGGTGTCATCATAGATAATTTCAACCAACAGAAAAAGAAGCT TGGAGGTCAAGACATCTTTATGACAGAAGAACAGAAGAAATACTATAATGCAATGAAAAAGCTGGGGTCCAAGAAGCCACAAAAGCCAAT TCCTCGACCAGGGAACAAAATCCAAGGATGTATATTTGACCTAGTGACAAATCAAGCCTTTGATATTAGTATCATGGTTCTTATCTGTCT CAACATGGTAACCATGATGGTAGAAAAGGAGGGTCAAAGTCAACATATGACTGAAGTTTTATATTGGATAAATGTGGTTTTTATAATCCT TTTCACTGGAGAATGTGTGCTAAAACTGATCTCCCTCAGACACTACTACTTCACTGTAGGATGGAATATTTTTGATTTTGTGGTTGTGAT TATCTCCATTGTAGGTATGTTTCTAGCTGATTTGATTGAAACGTATTTTGTGTCCCCTACCCTGTTCCGAGTGATCCGTCTTGCCAGGAT TGGCCGAATCCTACGTCTAGTCAAAGGAGCAAAGGGGATCCGCACGCTGCTCTTTGCTTTGATGATGTCCCTTCCTGCGTTGTTTAACAT CGGCCTCCTGCTCTTCCTGGTCATGTTCATCTACGCCATCTTTGGAATGTCCAACTTTGCCTATGTTAAAAAGGAAGATGGAATTAATGA CATGTTCAATTTTGAGACCTTTGGCAACAGTATGATTTGCCTGTTCCAAATTACAACCTCTGCTGGCTGGGATGGATTGCTAGCACCTAT TCTTAACAGTAAGCCACCCGACTGTGACCCAAAAAAAGTTCATCCTGGAAGTTCAGTTGAAGGAGACTGTGGTAACCCATCTGTTGGAAT ATTCTACTTTGTTAGTTATATCATCATATCCTTCCTGGTTGTGGTGAACATGTACATTGCAGTCATACTGGAGAATTTTAGTGTTGCCAC TGAAGAAAGTACTGAACCTCTGAGTGAGGATGACTTTGAGATGTTCTATGAGGTTTGGGAGAAGTTTGATCCCGATGCGACCCAGTTTAT AGAGTTCTCTAAACTCTCTGATTTTGCAGCTGCCCTGGATCCTCCTCTTCTCATAGCAAAACCCAACAAAGTCCAGCTCATTGCCATGGA TCTGCCCATGGTTAGTGGTGACCGGATCCATTGTCTTGACATCTTATTTGCTTTTACAAAGCGTGTTTTGGGTGAGAGTGGGGAGATGGA TTCTCTTCGTTCACAGATGGAAGAAAGGTTCATGTCTGCAAATCCTTCCAAAGTGTCCTATGAACCCATCACAACCACACTAAAACGGAA ACAAGAGGATGTGTCTGCTACTGTCATTCAGCGTGCTTATAGACGTTACCGCTTAAGGCAAAATGTCAAAAATATATCAAGTATATACAT AAAAGATGGAGACAGAGATGATGATTTACTCAATAAAAAAGATATGGCTTTTGATAATGTTAATGAGAACTCAAGTCCAGAAAAAACAGA TGCCACTTCATCCACCACCTCTCCACCTTCATATGATAGTGTAACAAAGCCAGACAAAGAGAAATATGAACAAGACAGAACAGAAAAGGA >26859_26859_3_EPB41L4A-SCN9A_EPB41L4A_chr5_111643083_ENST00000261486_SCN9A_chr2_167108395_ENST00000409435_length(amino acids)=947AA_BP=75 METTTTDMGCFCAVPEEFYCEVLLLDESKLTLTTQQQGIKKSTKGSVVLDHVFHHVNLVEIDYFGLRYCDRSHQTRLNRSSSSECSTVDN PLPGEGEEAEAEPMNSDEPEACFTDGCVWRFSCCQVNIESGKGKIWWNIRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTI KIILEYADKIFTYIFILEMLLKWIAYGYKTYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYECINTTDGSRFPASQVPNRSECFALMNVSQNVRWKNLKVNFDNVGLGYLSLLQV ATFKGWTIIMYAAVDSVNVDKQPKYEYSLYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKK PQKPIPRPGNKIQGCIFDLVTNQAFDISIMVLICLNMVTMMVEKEGQSQHMTEVLYWINVVFIILFTGECVLKLISLRHYYFTVGWNIFD FVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKE DGINDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPKKVHPGSSVEGDCGNPSVGIFYFVSYIIISFLVVVNMYIAVILEN FSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGE SGEMDSLRSQMEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGDRDDDLLNKKDMAFDNVNENSS -------------------------------------------------------------- >26859_26859_4_EPB41L4A-SCN9A_EPB41L4A_chr5_111643083_ENST00000261486_SCN9A_chr2_167108395_ENST00000409672_length(transcript)=6584nt_BP=481nt CGCAGGATGCGCGGGGACGCGCCACCGCCCTCCGCGCCCAGTTCCGCCGGCGCTTCCCCGGCGGCTCCCGGGCGCTGACTCTCCCGGGCT TTTCCGCCTTTCTCGCTCCCGCCCCGCCGGGCGGTTCGGCGGCCGGTCCCCGGACCCCGCCGGGAGCTGCTCGTCTCACCCTCGCCACGG CGCGGACAATAAATTAATGCATCGCGCTTGAGTGGAGGGGGCGGCTGGGCGCCTCGGTGGTAGCTTTCTCTCCTGGCTGGAGACGACCAC AACCGACATGGGCTGTTTCTGCGCTGTTCCGGAAGAATTTTACTGCGAAGTTTTGCTCCTGGATGAATCCAAGTTAACCCTTACCACCCA GCAGCAGGGCATCAAGAAGTCAACGAAAGGTTCCGTTGTCCTTGACCACGTATTCCATCACGTAAACCTTGTGGAGATAGATTATTTTGG GCTACGTTACTGTGACAGAAGCCATCAGACGAGATTAAACCGGTCAAGCTCCTCAGAGTGCAGCACAGTTGATAACCCTTTGCCTGGAGA AGGAGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAGAGGCCTGTTTCACAGATGGTTGTGTATGGAGGTTCTCATGCTGCCA AGTTAACATAGAGTCAGGGAAAGGAAAAATCTGGTGGAACATCAGGAAAACCTGCTACAAGATTGTTGAACACAGTTGGTTTGAAAGCTT CATTGTCCTCATGATCCTGCTCAGCAGTGGTGCCCTGGCTTTTGAAGATATTTATATTGAAAGGAAAAAGACCATTAAGATTATCCTGGA GTATGCAGACAAGATCTTCACTTACATCTTCATTCTGGAAATGCTTCTAAAATGGATAGCATATGGTTATAAAACATATTTCACCAATGC CTGGTGTTGGCTGGATTTCCTAATTGTTGATGTTTCTTTGGTTACTTTAGTGGCAAACACTCTTGGCTACTCAGATCTTGGCCCCATTAA ATCCCTTCGGACACTGAGAGCTTTAAGACCTCTAAGAGCCTTATCTAGATTTGAAGGAATGAGGGTCGTTGTGAATGCACTCATAGGAGC AATTCCTTCCATCATGAATGTGCTACTTGTGTGTCTTATATTCTGGCTGATATTCAGCATCATGGGAGTAAATTTGTTTGCTGGCAAGTT CTATGAGTGTATTAACACCACAGATGGGTCACGGTTTCCTGCAAGTCAAGTTCCAAATCGTTCCGAATGTTTTGCCCTTATGAATGTTAG TCAAAATGTGCGATGGAAAAACCTGAAAGTGAACTTTGATAATGTCGGACTTGGTTACCTATCTCTGCTTCAAGTTGCAACTTTTAAGGG ATGGACGATTATTATGTATGCAGCAGTGGATTCTGTTAATGTAGACAAGCAGCCCAAATATGAATATAGCCTCTACATGTATATTTATTT TGTCGTCTTTATCATCTTTGGGTCATTCTTCACTTTGAACTTGTTCATTGGTGTCATCATAGATAATTTCAACCAACAGAAAAAGAAGCT TGGAGGTCAAGACATCTTTATGACAGAAGAACAGAAGAAATACTATAATGCAATGAAAAAGCTGGGGTCCAAGAAGCCACAAAAGCCAAT TCCTCGACCAGGGAACAAAATCCAAGGATGTATATTTGACCTAGTGACAAATCAAGCCTTTGATATTAGTATCATGGTTCTTATCTGTCT CAACATGGTAACCATGATGGTAGAAAAGGAGGGTCAAAGTCAACATATGACTGAAGTTTTATATTGGATAAATGTGGTTTTTATAATCCT TTTCACTGGAGAATGTGTGCTAAAACTGATCTCCCTCAGACACTACTACTTCACTGTAGGATGGAATATTTTTGATTTTGTGGTTGTGAT TATCTCCATTGTAGGTATGTTTCTAGCTGATTTGATTGAAACGTATTTTGTGTCCCCTACCCTGTTCCGAGTGATCCGTCTTGCCAGGAT TGGCCGAATCCTACGTCTAGTCAAAGGAGCAAAGGGGATCCGCACGCTGCTCTTTGCTTTGATGATGTCCCTTCCTGCGTTGTTTAACAT CGGCCTCCTGCTCTTCCTGGTCATGTTCATCTACGCCATCTTTGGAATGTCCAACTTTGCCTATGTTAAAAAGGAAGATGGAATTAATGA CATGTTCAATTTTGAGACCTTTGGCAACAGTATGATTTGCCTGTTCCAAATTACAACCTCTGCTGGCTGGGATGGATTGCTAGCACCTAT TCTTAACAGTAAGCCACCCGACTGTGACCCAAAAAAAGTTCATCCTGGAAGTTCAGTTGAAGGAGACTGTGGTAACCCATCTGTTGGAAT ATTCTACTTTGTTAGTTATATCATCATATCCTTCCTGGTTGTGGTGAACATGTACATTGCAGTCATACTGGAGAATTTTAGTGTTGCCAC TGAAGAAAGTACTGAACCTCTGAGTGAGGATGACTTTGAGATGTTCTATGAGGTTTGGGAGAAGTTTGATCCCGATGCGACCCAGTTTAT AGAGTTCTCTAAACTCTCTGATTTTGCAGCTGCCCTGGATCCTCCTCTTCTCATAGCAAAACCCAACAAAGTCCAGCTCATTGCCATGGA TCTGCCCATGGTTAGTGGTGACCGGATCCATTGTCTTGACATCTTATTTGCTTTTACAAAGCGTGTTTTGGGTGAGAGTGGGGAGATGGA TTCTCTTCGTTCACAGATGGAAGAAAGGTTCATGTCTGCAAATCCTTCCAAAGTGTCCTATGAACCCATCACAACCACACTAAAACGGAA ACAAGAGGATGTGTCTGCTACTGTCATTCAGCGTGCTTATAGACGTTACCGCTTAAGGCAAAATGTCAAAAATATATCAAGTATATACAT AAAAGATGGAGACAGAGATGATGATTTACTCAATAAAAAAGATATGGCTTTTGATAATGTTAATGAGAACTCAAGTCCAGAAAAAACAGA TGCCACTTCATCCACCACCTCTCCACCTTCATATGATAGTGTAACAAAGCCAGACAAAGAGAAATATGAACAAGACAGAACAGAAAAGGA AGACAAAGGGAAAGACAGCAAGGAAAGCAAAAAATAGAGCTTCATTTTTGATATATTGTTTACAGCCTGTGAAAGTGATTTATTTGTGTT AATAAAACTCTTTTGAGGAAGTCTATGCCAAAATCCTTTTTATCAAAATATTCTCGAAGGCAGTGCAGTCACTAACTCTGATTTCCTAAG AAAGGTGGGCAGCATTAGCAGATGGTTATTTTTGCACTGATGATTCTTTAAGAATCGTAAGAGAACTCTGTAGGAATTATTGATTATAGC ATACAAAAGTGATTCAGTTTTTTGGTTTTTAATAAATCAGAAGACCATGTAGAAAACTTTTACATCTGCCTTGTCATCTTTTCACAGGAT TGTAATTAGTCTTGTTTCCCATGTAAATAAACAACACACGCATACAGAAAAATCTATTATTTATCTATTATTTGGAAATCAACAAAAGTA TTTGCCTTGGCTTTGCAATGAAATGCTTGATAGAAGTAATGGACATTAGTTATGAATGTTTAGTTAAAATGCATTATTAGGGAGCTTGAC TTTTTATCAATGTACAGAGGTTATTCTATATTTTGAGGTGCTTAAATTTATTCTACATTGCATCAGAACCAATTTATATGTGCCTATAAA ATGCCATGGGATTAAAAATATATGTAGGCTATTCATTTCTACAAATGTTTTTCATTCATCTTGACTCACATGCCAACAAGGATAAGACTT ACCTTTAGAGTATTGTGTTTCATAGCCTTTCTTCTTTCATATCCCTTTTTGTTCATAGAATAACCACAGAACTTGAAAAATTATTCTAAG TACATATTACACTCCTCAAAAAAAACAAAGATAACTGAGAAAAAAGTTATTGACAGAAGTTCTATTTGCTATTATTTACATAGCCTAACA TTTGACTGTGCTGCCCAAAATACTGATAATAGTCTCTTAAACTCTTTTGTCAAATTTTCCTGCTTTCTTATGCAGTATTGTTTAGTCATC CTTTCGCTGTAAGCAAAGTTGATGAAATCCTTCCTGATATGCAGTTAGTTGTTTGACCACGGTACATACTTGAGCAGATAATAACTTGGG CACAGTATTTATTGCATCACTTGTATACAATCCCGTGTTTGGCAAGCTTTCAAATCATGTAATATGACAGACTTTACACAGATATGTGTT TAGTATGAATAAAAAAGCATTGAAATAGGGATTCTTGCCAACTTGCTCTCTTGCCACCAACTTACTTTCCTAAATTATGGAAGTAATCTT TTTTGGATATACTTCAATGTATACAATGAGGAAGATGTCACCTTCTCCTTAAAATTCTATGATGTGAAATATATTTTGCCTCAATCAACA CAGTACCATGGGCTTCTAATTTATCAAGCACATATTCATTTTGCATTAGCTGTAGACATCTAGTTTTTTGAAAACACCTATTAATAGTAA TTTGAAAAGAAATAACCATAATGCTTTTTTTCGTGAGTTTATTTCAGGAATATGAGATCTTTCTTCTATAAAGTTATTCATGCACAGGCA AAAATTGAGCTACACAGGTAGAATGTAGTTTTACTTAGAAGATTTTTGTGGGAGGTTTTGAAGCAAATATATAAAACAACTTTCACTAAT TTGCTTTCCATATTTAAAAAATAATAAATTACATTTATATAATAAATGTTTAAAGCACATATTTTTTGTTGTTCTGGCAATTTAAAAAGA AAGAGGATTTAAACGTACCTATAGAAACAAAGATTTATGGTTAAAGAATGAGATCAGAAGTCTAGAATGTTTTTAAATTGTGATATATTT TACAACATCCGTTATTACTTTGAGACATTTGTCCTAATCTACGTATAAAACTCAATCTAGGGCTAAAGATTCTTTATACCATCTTAGGTT CATTCATCTTAGGCTATTTGAACCACTTTTTAATTTAATATGAAAGACACCATGCAGTGTTTTCCGAGACTACATAGATCATTTTATCAC ATACCTACCAAGCCTGTTGGAAATAGGTTTTGATAATTTAAGTAGGGACCTATACAAAATATATTACATTTATCAGATTTTTAAATACAT TCAATTAAGAATTTAACATCACCTTAAATTTGAATTCAATCTACCGTTATTTCAAACTCACAAATATAACTGCATTATGAATACTTACAT AATGTAGTAAGACAAGATGTTTGACAGGTTCGTGTGTAATTTTCTATTAATGTTTTTACATTGCCTTGTTTTTATGTAAAATAAAAAATA TGGGCAACTGGTTTGTTAACAACACAATTTCTTCTTAGCATTTCAAAAATATATATAAAGTTGTTCTTTTTCCTATTTCATGAACTATGT TTTTTTTTAAAATAACATGGTTAAGTTTTATATATATTTACGTTTGTTTCAGGAATGTCTACTTGTGACTTTTTATCAATTAAAAATAAT ATTTGGAAGAAAGAGCTTATTAAGTATAAGCTTGAAGTAAAATTAGACCTCTCTTTCCATGTAGATTACTGTTTGTACTGATGGTTTCAC CCTTCAGAAGGCACTGTCATATTAATATTTAAATTTTATAATCGCTGAACTTATTACACCCAACAATACAGAAAGGCAGTTACACTGAAG AACTTAACTTAGAATAAAATGGAAGCAAACAGGTTTTCTAAAAACTTTTTTAAGTGACCAGGTCTCGCTCTGTCACCCAGGCTAGAGTGC AATGGCATGATCATAGCTCTCTGCAGCCTCAACTCTGGGCTCAAGCAACCCTCCTGCCTCAGCCTCCCAAGTAGCTAAGACTACAGGTAC ATGCCACCATGCCTGGCTAATATTTAAATTTTTGTAGATAAGGGGTCTTGCTATGTTGCCCAGGCTAGTCTCAAACTCCTGGCTTCAAGT GTTCCTACTGTCATGACCTGCCAACATGCTGGGGTTACAGGCATGAGCCACCATGCCCCAAACAGGTTTGAACACAAATCTTTCGGATGA AAATTAGAGAACCTAATTTTAGCTTTTTGATAGTTACCTAGTTTGCAAAAGATTTGGGTGACTTGTGAGCTGTTTTTAAATGCTGATTGT TGAACATCACAACCCAAAATACTTAGCATGATTTTATAGAGTTTTGATAGCTTTATTAAAAAGAGTGAAAATAAAATGCATATGTAAATA AAGCAGTTCTAAATAGCTATTTCAGAGAAATGTTAATAGAAGTGCTGAAAGAAGGGCCAACTAAATTAGGATGGCCAGGGAATTGGCCTG GGTTTAGGACCTATGTATGAAGGCCACCAATTTTTTAAAAATATCTGTGGTTTATTATGTTATTATCTTCTTGAGGAAAACAATCAAGAA TTGCTTCATGAAAATAAATAAATAGCCATGAATATCATAAAGCTGTTTACATAGGATTCTTTACAAATTTCATAGATCTATGAATGCTCA AAATGTTTGAGTTTGCCATAAATTATATTGTAGTTATATTGTAGTTATACTTGAGACTGACACATTGTAATATAATCTAAGAATAAAAGT >26859_26859_4_EPB41L4A-SCN9A_EPB41L4A_chr5_111643083_ENST00000261486_SCN9A_chr2_167108395_ENST00000409672_length(amino acids)=946AA_BP=75 METTTTDMGCFCAVPEEFYCEVLLLDESKLTLTTQQQGIKKSTKGSVVLDHVFHHVNLVEIDYFGLRYCDRSHQTRLNRSSSSECSTVDN PLPGEGEEAEAEPMNSDEPEACFTDGCVWRFSCCQVNIESGKGKIWWNIRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTI KIILEYADKIFTYIFILEMLLKWIAYGYKTYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN ALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYECINTTDGSRFPASQVPNRSECFALMNVSQNVRWKNLKVNFDNVGLGYLSLLQV ATFKGWTIIMYAAVDSVNVDKQPKYEYSLYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKK PQKPIPRPGNKIQGCIFDLVTNQAFDISIMVLICLNMVTMMVEKEGQSQHMTEVLYWINVVFIILFTGECVLKLISLRHYYFTVGWNIFD FVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKE DGINDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPKKVHPGSSVEGDCGNPSVGIFYFVSYIIISFLVVVNMYIAVILEN FSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGE SGEMDSLRSQMEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGDRDDDLLNKKDMAFDNVNENSS -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for EPB41L4A-SCN9A |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for EPB41L4A-SCN9A |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for EPB41L4A-SCN9A |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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