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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:FAM120B-TIAM2 (FusionGDB2 ID:28423) |
Fusion Gene Summary for FAM120B-TIAM2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: FAM120B-TIAM2 | Fusion gene ID: 28423 | Hgene | Tgene | Gene symbol | FAM120B | TIAM2 | Gene ID | 84498 | 26230 |
Gene name | family with sequence similarity 120B | TIAM Rac1 associated GEF 2 | |
Synonyms | CCPG|KIAA1838|PGCC1|SAN1|dJ894D12.1 | STEF|TIAM-2 | |
Cytomap | 6q27 | 6q25.2-q25.3 | |
Type of gene | protein-coding | protein-coding | |
Description | constitutive coactivator of peroxisome proliferator-activated receptor gammaPPARG constitutive coactivator 1PPARgamma constitutive coactivator 1constitutive coactivator of PPAR-gammasenataxin-associated nuclease 1 | T-lymphoma invasion and metastasis-inducing protein 2SIF and TIAM1-like exchange factorT cell lymphoma invasion and metastasis 2 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q96EK7 | . | |
Ensembl transtripts involved in fusion gene | ENST00000252510, ENST00000476287, ENST00000537664, ENST00000540480, ENST00000496635, | ENST00000275246, ENST00000318981, ENST00000360366, ENST00000367174, ENST00000449545, ENST00000456144, ENST00000456877, ENST00000528391, ENST00000529824, ENST00000461783, | |
Fusion gene scores | * DoF score | 15 X 10 X 4=600 | 18 X 17 X 10=3060 |
# samples | 14 | 23 | |
** MAII score | log2(14/600*10)=-2.09953567355091 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(23/3060*10)=-3.73382588663564 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: FAM120B [Title/Abstract] AND TIAM2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | FAM120B(170639638)-TIAM2(155577618), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across FAM120B (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across TIAM2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | GBM | TCGA-19-5960-01A | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
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Fusion Gene ORF analysis for FAM120B-TIAM2 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000252510 | ENST00000275246 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000252510 | ENST00000318981 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000252510 | ENST00000360366 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000252510 | ENST00000367174 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000252510 | ENST00000449545 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000252510 | ENST00000456144 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000252510 | ENST00000456877 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000252510 | ENST00000528391 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000252510 | ENST00000529824 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000476287 | ENST00000275246 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000476287 | ENST00000318981 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000476287 | ENST00000360366 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000476287 | ENST00000367174 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000476287 | ENST00000449545 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000476287 | ENST00000456144 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000476287 | ENST00000456877 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000476287 | ENST00000528391 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000476287 | ENST00000529824 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000537664 | ENST00000275246 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000537664 | ENST00000318981 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000537664 | ENST00000360366 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000537664 | ENST00000367174 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000537664 | ENST00000449545 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000537664 | ENST00000456144 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000537664 | ENST00000456877 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000537664 | ENST00000528391 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000537664 | ENST00000529824 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000540480 | ENST00000275246 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000540480 | ENST00000318981 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000540480 | ENST00000360366 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000540480 | ENST00000367174 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000540480 | ENST00000449545 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000540480 | ENST00000456144 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000540480 | ENST00000456877 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000540480 | ENST00000528391 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
5CDS-intron | ENST00000540480 | ENST00000529824 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
In-frame | ENST00000252510 | ENST00000461783 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
In-frame | ENST00000476287 | ENST00000461783 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
In-frame | ENST00000537664 | ENST00000461783 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
In-frame | ENST00000540480 | ENST00000461783 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
intron-3CDS | ENST00000496635 | ENST00000461783 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
intron-intron | ENST00000496635 | ENST00000275246 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
intron-intron | ENST00000496635 | ENST00000318981 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
intron-intron | ENST00000496635 | ENST00000360366 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
intron-intron | ENST00000496635 | ENST00000367174 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
intron-intron | ENST00000496635 | ENST00000449545 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
intron-intron | ENST00000496635 | ENST00000456144 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
intron-intron | ENST00000496635 | ENST00000456877 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
intron-intron | ENST00000496635 | ENST00000528391 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
intron-intron | ENST00000496635 | ENST00000529824 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000540480 | FAM120B | chr6 | 170639638 | + | ENST00000461783 | TIAM2 | chr6 | 155577618 | + | 3648 | 2408 | 307 | 3045 | 912 |
ENST00000537664 | FAM120B | chr6 | 170639638 | + | ENST00000461783 | TIAM2 | chr6 | 155577618 | + | 3411 | 2171 | 85 | 2808 | 907 |
ENST00000476287 | FAM120B | chr6 | 170639638 | + | ENST00000461783 | TIAM2 | chr6 | 155577618 | + | 3365 | 2125 | 108 | 2762 | 884 |
ENST00000252510 | FAM120B | chr6 | 170639638 | + | ENST00000461783 | TIAM2 | chr6 | 155577618 | + | 1427 | 187 | 141 | 824 | 227 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000540480 | ENST00000461783 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + | 0.000233068 | 0.9997669 |
ENST00000537664 | ENST00000461783 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + | 0.00031961 | 0.9996804 |
ENST00000476287 | ENST00000461783 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + | 0.000454979 | 0.99954504 |
ENST00000252510 | ENST00000461783 | FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577618 | + | 0.001801751 | 0.99819833 |
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Fusion Genomic Features for FAM120B-TIAM2 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577617 | + | 1.43E-07 | 0.9999999 |
FAM120B | chr6 | 170639638 | + | TIAM2 | chr6 | 155577617 | + | 1.43E-07 | 0.9999999 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for FAM120B-TIAM2 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr6:170639638/chr6:155577618) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
FAM120B | . |
FUNCTION: Functions as a transactivator of PPARG and ESR1. Functions in adipogenesis through PPARG activation (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000275246 | 11 | 13 | 628_695 | 414 | 627.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000275246 | 11 | 13 | 1099_1293 | 414 | 627.0 | Domain | DH | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000275246 | 11 | 13 | 1347_1478 | 414 | 627.0 | Domain | PH 2 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000275246 | 11 | 13 | 506_620 | 414 | 627.0 | Domain | PH 1 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000275246 | 11 | 13 | 810_881 | 414 | 627.0 | Domain | RBD | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000275246 | 11 | 13 | 890_976 | 414 | 627.0 | Domain | PDZ | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000456877 | 19 | 21 | 1099_1293 | 801 | 1014.0 | Domain | DH | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000456877 | 19 | 21 | 1347_1478 | 801 | 1014.0 | Domain | PH 2 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000456877 | 19 | 21 | 810_881 | 801 | 1014.0 | Domain | RBD | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000456877 | 19 | 21 | 890_976 | 801 | 1014.0 | Domain | PDZ |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000318981 | 24 | 26 | 628_695 | 1489 | 1702.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000360366 | 23 | 25 | 628_695 | 1513 | 1726.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000456144 | 25 | 27 | 628_695 | 1518 | 1731.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000456877 | 19 | 21 | 628_695 | 801 | 1014.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000461783 | 27 | 29 | 628_695 | 1489 | 1702.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000529824 | 23 | 25 | 628_695 | 1518 | 1731.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000318981 | 24 | 26 | 1099_1293 | 1489 | 1702.0 | Domain | DH | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000318981 | 24 | 26 | 1347_1478 | 1489 | 1702.0 | Domain | PH 2 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000318981 | 24 | 26 | 506_620 | 1489 | 1702.0 | Domain | PH 1 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000318981 | 24 | 26 | 810_881 | 1489 | 1702.0 | Domain | RBD | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000318981 | 24 | 26 | 890_976 | 1489 | 1702.0 | Domain | PDZ | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000360366 | 23 | 25 | 1099_1293 | 1513 | 1726.0 | Domain | DH | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000360366 | 23 | 25 | 1347_1478 | 1513 | 1726.0 | Domain | PH 2 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000360366 | 23 | 25 | 506_620 | 1513 | 1726.0 | Domain | PH 1 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000360366 | 23 | 25 | 810_881 | 1513 | 1726.0 | Domain | RBD | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000360366 | 23 | 25 | 890_976 | 1513 | 1726.0 | Domain | PDZ | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000456144 | 25 | 27 | 1099_1293 | 1518 | 1731.0 | Domain | DH | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000456144 | 25 | 27 | 1347_1478 | 1518 | 1731.0 | Domain | PH 2 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000456144 | 25 | 27 | 506_620 | 1518 | 1731.0 | Domain | PH 1 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000456144 | 25 | 27 | 810_881 | 1518 | 1731.0 | Domain | RBD | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000456144 | 25 | 27 | 890_976 | 1518 | 1731.0 | Domain | PDZ | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000456877 | 19 | 21 | 506_620 | 801 | 1014.0 | Domain | PH 1 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000461783 | 27 | 29 | 1099_1293 | 1489 | 1702.0 | Domain | DH | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000461783 | 27 | 29 | 1347_1478 | 1489 | 1702.0 | Domain | PH 2 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000461783 | 27 | 29 | 506_620 | 1489 | 1702.0 | Domain | PH 1 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000461783 | 27 | 29 | 810_881 | 1489 | 1702.0 | Domain | RBD | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000461783 | 27 | 29 | 890_976 | 1489 | 1702.0 | Domain | PDZ | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000529824 | 23 | 25 | 1099_1293 | 1518 | 1731.0 | Domain | DH | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000529824 | 23 | 25 | 1347_1478 | 1518 | 1731.0 | Domain | PH 2 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000529824 | 23 | 25 | 506_620 | 1518 | 1731.0 | Domain | PH 1 | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000529824 | 23 | 25 | 810_881 | 1518 | 1731.0 | Domain | RBD | |
Tgene | TIAM2 | chr6:170639638 | chr6:155577618 | ENST00000529824 | 23 | 25 | 890_976 | 1518 | 1731.0 | Domain | PDZ |
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Fusion Gene Sequence for FAM120B-TIAM2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>28423_28423_1_FAM120B-TIAM2_FAM120B_chr6_170639638_ENST00000252510_TIAM2_chr6_155577618_ENST00000461783_length(transcript)=1427nt_BP=187nt GAACGAGGCGGCTGTGGCGGTGGCTGAGGCGGCTGGGCCTAGGGTGCAGCGGGCGCGTCTGCGGCTGGTGTTGGCGCATCTCTAGATGTC ACCAGCACCTGCCTAGCTGTCAAGGAGTGGTTTGTGTATCCTGGGAACCCACTGAGGCACCCGGACCTCGTCAGGCCGCTGCAGATGACC ATTCCAGCTTCATCCAGGTCTTTAAAAGTCCTGAAGAATTCCTCCAGCAACGAGTGGACCGGTGAGACTGGCAAGGGAACCTTGCTGGAC TCTGACGAGGGCAGCTTGAGCAGCGGCACCCAGAGCAGCGGCTGCCCCACGGCTGAGGGCAGGCAGGACTCCAAGAGCACTTCTCCCGGG AAATACCCACACCCCGGCTTGGCAGATTTTGCCGACAATCTCATCAAAGAGAGTGACATCCTGAGCGATGAAGATGATGACCACCGTCAG ACTGTGAAGCAGGGCAGCCCTACTAAAGACATCGAAATTCAGTTCCAGAGACTGAGGATTTCCGAGGACCCAGACGTTCACCCCGAGGCT GAGCAGCAGCCTGGCCCGGAGTCGGGTGAGGGTCAGAAAGGAGGAGAGCAGCCCAAACTGGTCCGGGGGCACTTCTGCCCCATTAAACGA AAAGCCAACAGCACCAAGAGGGACAGAGGAACTTTGCTCAAGGCGCAGATCCGTCACCAGTCCCTTGACAGTCAGTCTGAAAATGCCACC ATCGACCTAAATTCTGTTCTAGAGCGAGAATTCAGTGTCCAGAGTTTAACATCTGTTGTCAGTGAGGAGTGTTTTTATGAAACAGAGAGC CACGGAAAATCATAGTATGATTCAATCCAGATATGGGTTAAATTCCTCATTTTACTTTTAAACTGGTGGTAAAGTGGAAATTGCAAAAAA AAAAAAAAAAAAAAACTGTTCATTCCTGGGTTTTGTGCAGTATACATTTTCCCACAAAATGGTTGTAAAGATTTAAGTTATTTTAATTTA TTGTGGATCAGAAACCTAGATGAAACTGGTCAGAATCTGTAAATTACTTAGTTTATATCCACTTTGAGCAGGTATCAAATGATTTAGGAT CCTTAAAATTACATTCTAATAATTAAGTTATGTGGAAAAAGTAAGGCTGGGGAAGTCGTGATTAATAGTTTTCAAAGGGCCATTTTTTAA AATCCTCTGGGCATTTTCTTTCAGCTGTTTGTTAGTTTTTGCTTTATTTAAAGCATATTTAAGTTATTTTAATGTGGTTTAGGGGCAAAA TGTGCAGATACTTCATTTTTGTAAGATAGATTGTAATAGATGCTGTTTATACTAAACATGTCATAACTATCTATACAGTATATATTAAAA >28423_28423_1_FAM120B-TIAM2_FAM120B_chr6_170639638_ENST00000252510_TIAM2_chr6_155577618_ENST00000461783_length(amino acids)=227AA_BP=15 MRHPDLVRPLQMTIPASSRSLKVLKNSSSNEWTGETGKGTLLDSDEGSLSSGTQSSGCPTAEGRQDSKSTSPGKYPHPGLADFADNLIKE SDILSDEDDDHRQTVKQGSPTKDIEIQFQRLRISEDPDVHPEAEQQPGPESGEGQKGGEQPKLVRGHFCPIKRKANSTKRDRGTLLKAQI -------------------------------------------------------------- >28423_28423_2_FAM120B-TIAM2_FAM120B_chr6_170639638_ENST00000476287_TIAM2_chr6_155577618_ENST00000461783_length(transcript)=3365nt_BP=2125nt GTGAACGAGGCGGCTGTGGCGGTGGCTGAGGCGGCTGGGCCTAGGGTGCAGCGGGCGCGTCTGCGGCTGGTGTTGGCGCATCTCTAGATC CTTTCCCGGAGTTCAGTTATGGGTGTGAGAGGTTTGCAAGGATTTGTGGGAAGTACCTGCCCACATATATGTACAGTAGTAAATTTCAAA GAACTGGCAGAGCACCACCGAAGCAAGTATCCTGGATGTACCCCTACCATTGTGGTTGATGCCATGTGTTGTCTCAGATATTGGTATACT CCAGAATCTTGGATCTGCGGTGGCCAGTGGCGAGAATACTTTTCTGCTTTGCGAGATTTTGTTAAAACTTTTACGGCAGCTGGGATCAAG TTGATATTCTTCTTTGATGGCATGGTGGAGCAGGATAAGAGAGATGAATGGGTGAAACGAAGGCTCAAGAACAACAGGGAGATATCCAGG ATTTTTCATTACATCAAGTCACACAAGGAGCAGCCAGGCAGAAATATGTTCTTCATCCCCTCAGGGCTAGCTGTGTTTACACGATTTGCT CTAAAGACACTGGGCCAGGAAACTTTGTGTTCTTTGCAGGAAGCAGATTATGAGGTAGCTTCCTATGGCCTCCAGCATAACTGTCTTGGG ATTCTGGGGGAAGACACTGATTACCTAATCTATGACACTTGTCCCTACTTTTCAATTAGCGAGCTCTGCCTAGAGAGCCTGGACACCGTC ATGCTCTGCAGAGAGAAGCTCTGTGAGAGTCTGGGCCTCTGTGTGGCCGACCTTCCTCTTCTGGCCTGCCTCCTTGGCAACGACATAATC CCAGAGGGCATGTTTGAAAGCTTTAGGTACAAATGCTTATCGTCCTACACCTCTGTAAAAGAGAACTTTGACAAAAAAGGTAACATCATA TTAGCTGTGTCAGACCATATATCGAAAGTTCTTTACTTGTATCAAGGTGAGAAAAAATTAGAAGAGATATTACCTCTGGGACCAAACAAA GCTCTTTTTTATAAAGGAATGGCATCATATCTTTTACCAGGACAAAAATCTCCATGGTTTTTCCAAAAACCCAAAGGTGTAATAACTTTG GACAAACAAGTAATATCCACGAGTTCAGACGCCGAATCCAGGGAAGAAGTTCCCATGTGTTCAGATGCTGAATCCAGGCAAGAAGTTCCC ATGTGTACAGGCCCTGAATCCAGGCGAGAAGTTCCCGTGTATACAGATTCTGAACCCAGGCAAGAAGTTCCCATGTGTTCAGACCCTGAA CCCAGGCAAGAAGTTCCCACGTGTACAGGCCCTGAATCCAGGCGAGAAGTTCCCATGTGTTCAGACCCTGAACCCAGGCAAGAAGTTCCC ATGTGTACAGGCCCTGAAGCCAGGCAAGAAGTTCCCATGTATACAGACTCTGAACCCAGGCAAGAAGTTCCCATGTATACAGACTCTGAA CCCAGGCAAGAAGTTCCCATGTATACAGGCTCTGAACCCAGGCAAGAAGTTCCCATGTATACAGGCCCTGAATCCAGGCAAGAAGTTCCC ATGTATACAGGCCCTGAATCCAGGCAAGAAGTTTTAATACGGACAGACCCTGAATCTAGGCAAGAAATTATGTGTACAGGCCATGAATCC AAACAGGAAGTTCCCATATGTACAGATCCTATATCCAAGCAAGAAGACTCCATGTGTACACACGCTGAAATCAATCAAAAATTACCTGTA GCAACAGATTTTGAATTTAAGCTAGAAGCTCTCATGTGTACAAACCCTGAAATTAAACAAGAAGACCCCACAAATGTGGGGCCTGAAGTA AAGCAACAAGTAACCATGGTTTCAGACACTGAAATCTTAAAGGTTGCTAGAACACATCACGTCCAAGCAGAAAGCTACCTGGTGTACAAC ATCATGAGCAGTGGAGAGATTGAATGCAGCAACACCCTAGAAGATGAGCTTGACCAGGCCTTACCCAGCCAGGCCTTCATTTACCGTCCC ATTCGACAGCGGGTCTACTCACTCTTACTGGAGGACTGTCAAGATGTCACCAGCACCTGCCTAGCTGTCAAGGAGTGGTTTGTGTATCCT GGGAACCCACTGAGGCACCCGGACCTCGTCAGGCCGCTGCAGATGACCATTCCAGCTTCATCCAGGTCTTTAAAAGTCCTGAAGAATTCC TCCAGCAACGAGTGGACCGGTGAGACTGGCAAGGGAACCTTGCTGGACTCTGACGAGGGCAGCTTGAGCAGCGGCACCCAGAGCAGCGGC TGCCCCACGGCTGAGGGCAGGCAGGACTCCAAGAGCACTTCTCCCGGGAAATACCCACACCCCGGCTTGGCAGATTTTGCCGACAATCTC ATCAAAGAGAGTGACATCCTGAGCGATGAAGATGATGACCACCGTCAGACTGTGAAGCAGGGCAGCCCTACTAAAGACATCGAAATTCAG TTCCAGAGACTGAGGATTTCCGAGGACCCAGACGTTCACCCCGAGGCTGAGCAGCAGCCTGGCCCGGAGTCGGGTGAGGGTCAGAAAGGA GGAGAGCAGCCCAAACTGGTCCGGGGGCACTTCTGCCCCATTAAACGAAAAGCCAACAGCACCAAGAGGGACAGAGGAACTTTGCTCAAG GCGCAGATCCGTCACCAGTCCCTTGACAGTCAGTCTGAAAATGCCACCATCGACCTAAATTCTGTTCTAGAGCGAGAATTCAGTGTCCAG AGTTTAACATCTGTTGTCAGTGAGGAGTGTTTTTATGAAACAGAGAGCCACGGAAAATCATAGTATGATTCAATCCAGATATGGGTTAAA TTCCTCATTTTACTTTTAAACTGGTGGTAAAGTGGAAATTGCAAAAAAAAAAAAAAAAAAAAACTGTTCATTCCTGGGTTTTGTGCAGTA TACATTTTCCCACAAAATGGTTGTAAAGATTTAAGTTATTTTAATTTATTGTGGATCAGAAACCTAGATGAAACTGGTCAGAATCTGTAA ATTACTTAGTTTATATCCACTTTGAGCAGGTATCAAATGATTTAGGATCCTTAAAATTACATTCTAATAATTAAGTTATGTGGAAAAAGT AAGGCTGGGGAAGTCGTGATTAATAGTTTTCAAAGGGCCATTTTTTAAAATCCTCTGGGCATTTTCTTTCAGCTGTTTGTTAGTTTTTGC TTTATTTAAAGCATATTTAAGTTATTTTAATGTGGTTTAGGGGCAAAATGTGCAGATACTTCATTTTTGTAAGATAGATTGTAATAGATG CTGTTTATACTAAACATGTCATAACTATCTATACAGTATATATTAAAAGAAAGCTTGTACTGTATCTTATTTGATGATATTTATTTTCTC >28423_28423_2_FAM120B-TIAM2_FAM120B_chr6_170639638_ENST00000476287_TIAM2_chr6_155577618_ENST00000461783_length(amino acids)=884AA_BP=672 MGVRGLQGFVGSTCPHICTVVNFKELAEHHRSKYPGCTPTIVVDAMCCLRYWYTPESWICGGQWREYFSALRDFVKTFTAAGIKLIFFFD GMVEQDKRDEWVKRRLKNNREISRIFHYIKSHKEQPGRNMFFIPSGLAVFTRFALKTLGQETLCSLQEADYEVASYGLQHNCLGILGEDT DYLIYDTCPYFSISELCLESLDTVMLCREKLCESLGLCVADLPLLACLLGNDIIPEGMFESFRYKCLSSYTSVKENFDKKGNIILAVSDH ISKVLYLYQGEKKLEEILPLGPNKALFYKGMASYLLPGQKSPWFFQKPKGVITLDKQVISTSSDAESREEVPMCSDAESRQEVPMCTGPE SRREVPVYTDSEPRQEVPMCSDPEPRQEVPTCTGPESRREVPMCSDPEPRQEVPMCTGPEARQEVPMYTDSEPRQEVPMYTDSEPRQEVP MYTGSEPRQEVPMYTGPESRQEVPMYTGPESRQEVLIRTDPESRQEIMCTGHESKQEVPICTDPISKQEDSMCTHAEINQKLPVATDFEF KLEALMCTNPEIKQEDPTNVGPEVKQQVTMVSDTEILKVARTHHVQAESYLVYNIMSSGEIECSNTLEDELDQALPSQAFIYRPIRQRVY SLLLEDCQDVTSTCLAVKEWFVYPGNPLRHPDLVRPLQMTIPASSRSLKVLKNSSSNEWTGETGKGTLLDSDEGSLSSGTQSSGCPTAEG RQDSKSTSPGKYPHPGLADFADNLIKESDILSDEDDDHRQTVKQGSPTKDIEIQFQRLRISEDPDVHPEAEQQPGPESGEGQKGGEQPKL -------------------------------------------------------------- >28423_28423_3_FAM120B-TIAM2_FAM120B_chr6_170639638_ENST00000537664_TIAM2_chr6_155577618_ENST00000461783_length(transcript)=3411nt_BP=2171nt ACTCGGTTGCCGCGCGTGGACTTACAAGCCCACGAAGCCATCGTTCGTCACAGCCTGGAAAAGGGAGGGGGCATCGATCTGGTTTATGTT TGGACCTCGAGGCTCCACCAGCGCTGGCGCAGGCAGGAAGGAGATCCTTTCCCGGAGTTCAGTTATGGGTGTGAGAGGTTTGCAAGGATT TGTGGGAAGTACCTGCCCACATATATGTACAGTAGTAAATTTCAAAGAACTGGCAGAGCACCACCGAAGCAAGTATCCTGGATGTACCCC TACCATTGTGGTTGATGCCATGTGTTGTCTCAGATATTGGTATACTCCAGAATCTTGGATCTGCGGTGGCCAGTGGCGAGAATACTTTTC TGCTTTGCGAGATTTTGTTAAAACTTTTACGGCAGCTGGGATCAAGTTGATATTCTTCTTTGATGGCATGGTGGAGCAGGATAAGAGAGA TGAATGGGTGAAACGAAGGCTCAAGAACAACAGGGAGATATCCAGGATTTTTCATTACATCAAGTCACACAAGGAGCAGCCAGGCAGAAA TATGTTCTTCATCCCCTCAGGGCTAGCTGTGTTTACACGATTTGCTCTAAAGACACTGGGCCAGGAAACTTTGTGTTCTTTGCAGGAAGC AGATTATGAGGTAGCTTCCTATGGCCTCCAGCATAACTGTCTTGGGATTCTGGGGGAAGACACTGATTACCTAATCTATGACACTTGTCC CTACTTTTCAATTAGCGAGCTCTGCCTAGAGAGCCTGGACACCGTCATGCTCTGCAGAGAGAAGCTCTGTGAGAGTCTGGGCCTCTGTGT GGCCGACCTTCCTCTTCTGGCCTGCCTCCTTGGCAACGACATAATCCCAGAGGGCATGTTTGAAAGCTTTAGGTACAAATGCTTATCGTC CTACACCTCTGTAAAAGAGAACTTTGACAAAAAAGGTAACATCATATTAGCTGTGTCAGACCATATATCGAAAGTTCTTTACTTGTATCA AGGTGAGAAAAAATTAGAAGAGATATTACCTCTGGGACCAAACAAAGCTCTTTTTTATAAAGGAATGGCATCATATCTTTTACCAGGACA AAAATCTCCATGGTTTTTCCAAAAACCCAAAGGTGTAATAACTTTGGACAAACAAGTAATATCCACGAGTTCAGACGCCGAATCCAGGGA AGAAGTTCCCATGTGTTCAGATGCTGAATCCAGGCAAGAAGTTCCCATGTGTACAGGCCCTGAATCCAGGCGAGAAGTTCCCGTGTATAC AGATTCTGAACCCAGGCAAGAAGTTCCCATGTGTTCAGACCCTGAACCCAGGCAAGAAGTTCCCACGTGTACAGGCCCTGAATCCAGGCG AGAAGTTCCCATGTGTTCAGACCCTGAACCCAGGCAAGAAGTTCCCATGTGTACAGGCCCTGAAGCCAGGCAAGAAGTTCCCATGTATAC AGACTCTGAACCCAGGCAAGAAGTTCCCATGTATACAGACTCTGAACCCAGGCAAGAAGTTCCCATGTATACAGGCTCTGAACCCAGGCA AGAAGTTCCCATGTATACAGGCCCTGAATCCAGGCAAGAAGTTCCCATGTATACAGGCCCTGAATCCAGGCAAGAAGTTTTAATACGGAC AGACCCTGAATCTAGGCAAGAAATTATGTGTACAGGCCATGAATCCAAACAGGAAGTTCCCATATGTACAGATCCTATATCCAAGCAAGA AGACTCCATGTGTACACACGCTGAAATCAATCAAAAATTACCTGTAGCAACAGATTTTGAATTTAAGCTAGAAGCTCTCATGTGTACAAA CCCTGAAATTAAACAAGAAGACCCCACAAATGTGGGGCCTGAAGTAAAGCAACAAGTAACCATGGTTTCAGACACTGAAATCTTAAAGGT TGCTAGAACACATCACGTCCAAGCAGAAAGCTACCTGGTGTACAACATCATGAGCAGTGGAGAGATTGAATGCAGCAACACCCTAGAAGA TGAGCTTGACCAGGCCTTACCCAGCCAGGCCTTCATTTACCGTCCCATTCGACAGCGGGTCTACTCACTCTTACTGGAGGACTGTCAAGA TGTCACCAGCACCTGCCTAGCTGTCAAGGAGTGGTTTGTGTATCCTGGGAACCCACTGAGGCACCCGGACCTCGTCAGGCCGCTGCAGAT GACCATTCCAGCTTCATCCAGGTCTTTAAAAGTCCTGAAGAATTCCTCCAGCAACGAGTGGACCGGTGAGACTGGCAAGGGAACCTTGCT GGACTCTGACGAGGGCAGCTTGAGCAGCGGCACCCAGAGCAGCGGCTGCCCCACGGCTGAGGGCAGGCAGGACTCCAAGAGCACTTCTCC CGGGAAATACCCACACCCCGGCTTGGCAGATTTTGCCGACAATCTCATCAAAGAGAGTGACATCCTGAGCGATGAAGATGATGACCACCG TCAGACTGTGAAGCAGGGCAGCCCTACTAAAGACATCGAAATTCAGTTCCAGAGACTGAGGATTTCCGAGGACCCAGACGTTCACCCCGA GGCTGAGCAGCAGCCTGGCCCGGAGTCGGGTGAGGGTCAGAAAGGAGGAGAGCAGCCCAAACTGGTCCGGGGGCACTTCTGCCCCATTAA ACGAAAAGCCAACAGCACCAAGAGGGACAGAGGAACTTTGCTCAAGGCGCAGATCCGTCACCAGTCCCTTGACAGTCAGTCTGAAAATGC CACCATCGACCTAAATTCTGTTCTAGAGCGAGAATTCAGTGTCCAGAGTTTAACATCTGTTGTCAGTGAGGAGTGTTTTTATGAAACAGA GAGCCACGGAAAATCATAGTATGATTCAATCCAGATATGGGTTAAATTCCTCATTTTACTTTTAAACTGGTGGTAAAGTGGAAATTGCAA AAAAAAAAAAAAAAAAAAACTGTTCATTCCTGGGTTTTGTGCAGTATACATTTTCCCACAAAATGGTTGTAAAGATTTAAGTTATTTTAA TTTATTGTGGATCAGAAACCTAGATGAAACTGGTCAGAATCTGTAAATTACTTAGTTTATATCCACTTTGAGCAGGTATCAAATGATTTA GGATCCTTAAAATTACATTCTAATAATTAAGTTATGTGGAAAAAGTAAGGCTGGGGAAGTCGTGATTAATAGTTTTCAAAGGGCCATTTT TTAAAATCCTCTGGGCATTTTCTTTCAGCTGTTTGTTAGTTTTTGCTTTATTTAAAGCATATTTAAGTTATTTTAATGTGGTTTAGGGGC AAAATGTGCAGATACTTCATTTTTGTAAGATAGATTGTAATAGATGCTGTTTATACTAAACATGTCATAACTATCTATACAGTATATATT >28423_28423_3_FAM120B-TIAM2_FAM120B_chr6_170639638_ENST00000537664_TIAM2_chr6_155577618_ENST00000461783_length(amino acids)=907AA_BP=695 MFGPRGSTSAGAGRKEILSRSSVMGVRGLQGFVGSTCPHICTVVNFKELAEHHRSKYPGCTPTIVVDAMCCLRYWYTPESWICGGQWREY FSALRDFVKTFTAAGIKLIFFFDGMVEQDKRDEWVKRRLKNNREISRIFHYIKSHKEQPGRNMFFIPSGLAVFTRFALKTLGQETLCSLQ EADYEVASYGLQHNCLGILGEDTDYLIYDTCPYFSISELCLESLDTVMLCREKLCESLGLCVADLPLLACLLGNDIIPEGMFESFRYKCL SSYTSVKENFDKKGNIILAVSDHISKVLYLYQGEKKLEEILPLGPNKALFYKGMASYLLPGQKSPWFFQKPKGVITLDKQVISTSSDAES REEVPMCSDAESRQEVPMCTGPESRREVPVYTDSEPRQEVPMCSDPEPRQEVPTCTGPESRREVPMCSDPEPRQEVPMCTGPEARQEVPM YTDSEPRQEVPMYTDSEPRQEVPMYTGSEPRQEVPMYTGPESRQEVPMYTGPESRQEVLIRTDPESRQEIMCTGHESKQEVPICTDPISK QEDSMCTHAEINQKLPVATDFEFKLEALMCTNPEIKQEDPTNVGPEVKQQVTMVSDTEILKVARTHHVQAESYLVYNIMSSGEIECSNTL EDELDQALPSQAFIYRPIRQRVYSLLLEDCQDVTSTCLAVKEWFVYPGNPLRHPDLVRPLQMTIPASSRSLKVLKNSSSNEWTGETGKGT LLDSDEGSLSSGTQSSGCPTAEGRQDSKSTSPGKYPHPGLADFADNLIKESDILSDEDDDHRQTVKQGSPTKDIEIQFQRLRISEDPDVH PEAEQQPGPESGEGQKGGEQPKLVRGHFCPIKRKANSTKRDRGTLLKAQIRHQSLDSQSENATIDLNSVLEREFSVQSLTSVVSEECFYE -------------------------------------------------------------- >28423_28423_4_FAM120B-TIAM2_FAM120B_chr6_170639638_ENST00000540480_TIAM2_chr6_155577618_ENST00000461783_length(transcript)=3648nt_BP=2408nt GTCACTCGGCGGCGGCGGTCGTTCCGGGAGCACTCCGGGCTCCGATCTCCGGTGTCACAGCAAAGATCCGCGTCTTTCCGATGAATCCAG CCAATGCCATCCAGTACACACGCGCAGGACCGGAGGGGCCGGGCCGTGGGAGGAGGCTCTGCGCCGCGGCTGCCCGGGTTCCCCTGCGCT CTGCCCTCGGCCGGGTCGGGTCTCCGCGGGTGCGCGCAGAGGATCTGGCTCTCGCCGGCGCCTGCCGCCCTTATATTCAGCCGGCCGCCC GCATGGCTAATGAGATGCAAATCAGCAGCCCCCCAATCTGGCGAGAGCTGTCACAAAGGAGCCACTTTTCCAAACCCTCCTCTCAATGGA TCGCCAAATGATCCTTTCCCGGAGTTCAGTTATGGGTGTGAGAGGTTTGCAAGGATTTGTGGGAAGTACCTGCCCACATATATGTACAGT AGTAAATTTCAAAGAACTGGCAGAGCACCACCGAAGCAAGTATCCTGGATGTACCCCTACCATTGTGGTTGATGCCATGTGTTGTCTCAG ATATTGGTATACTCCAGAATCTTGGATCTGCGGTGGCCAGTGGCGAGAATACTTTTCTGCTTTGCGAGATTTTGTTAAAACTTTTACGGC AGCTGGGATCAAGTTGATATTCTTCTTTGATGGCATGGTGGAGCAGGATAAGAGAGATGAATGGGTGAAACGAAGGCTCAAGAACAACAG GGAGATATCCAGGATTTTTCATTACATCAAGTCACACAAGGAGCAGCCAGGCAGAAATATGTTCTTCATCCCCTCAGGGCTAGCTGTGTT TACACGATTTGCTCTAAAGACACTGGGCCAGGAAACTTTGTGTTCTTTGCAGGAAGCAGATTATGAGGTAGCTTCCTATGGCCTCCAGCA TAACTGTCTTGGGATTCTGGGGGAAGACACTGATTACCTAATCTATGACACTTGTCCCTACTTTTCAATTAGCGAGCTCTGCCTAGAGAG CCTGGACACCGTCATGCTCTGCAGAGAGAAGCTCTGTGAGAGTCTGGGCCTCTGTGTGGCCGACCTTCCTCTTCTGGCCTGCCTCCTTGG CAACGACATAATCCCAGAGGGCATGTTTGAAAGCTTTAGGTACAAATGCTTATCGTCCTACACCTCTGTAAAAGAGAACTTTGACAAAAA AGGTAACATCATATTAGCTGTGTCAGACCATATATCGAAAGTTCTTTACTTGTATCAAGGTGAGAAAAAATTAGAAGAGATATTACCTCT GGGACCAAACAAAGCTCTTTTTTATAAAGGAATGGCATCATATCTTTTACCAGGACAAAAATCTCCATGGTTTTTCCAAAAACCCAAAGG TGTAATAACTTTGGACAAACAAGTAATATCCACGAGTTCAGACGCCGAATCCAGGGAAGAAGTTCCCATGTGTTCAGATGCTGAATCCAG GCAAGAAGTTCCCATGTGTACAGGCCCTGAATCCAGGCGAGAAGTTCCCGTGTATACAGATTCTGAACCCAGGCAAGAAGTTCCCATGTG TTCAGACCCTGAACCCAGGCAAGAAGTTCCCACGTGTACAGGCCCTGAATCCAGGCGAGAAGTTCCCATGTGTTCAGACCCTGAACCCAG GCAAGAAGTTCCCATGTGTACAGGCCCTGAAGCCAGGCAAGAAGTTCCCATGTATACAGACTCTGAACCCAGGCAAGAAGTTCCCATGTA TACAGACTCTGAACCCAGGCAAGAAGTTCCCATGTATACAGGCTCTGAACCCAGGCAAGAAGTTCCCATGTATACAGGCCCTGAATCCAG GCAAGAAGTTCCCATGTATACAGGCCCTGAATCCAGGCAAGAAGTTTTAATACGGACAGACCCTGAATCTAGGCAAGAAATTATGTGTAC AGGCCATGAATCCAAACAGGAAGTTCCCATATGTACAGATCCTATATCCAAGCAAGAAGACTCCATGTGTACACACGCTGAAATCAATCA AAAATTACCTGTAGCAACAGATTTTGAATTTAAGCTAGAAGCTCTCATGTGTACAAACCCTGAAATTAAACAAGAAGACCCCACAAATGT GGGGCCTGAAGTAAAGCAACAAGTAACCATGGTTTCAGACACTGAAATCTTAAAGGTTGCTAGAACACATCACGTCCAAGCAGAAAGCTA CCTGGTGTACAACATCATGAGCAGTGGAGAGATTGAATGCAGCAACACCCTAGAAGATGAGCTTGACCAGGCCTTACCCAGCCAGGCCTT CATTTACCGTCCCATTCGACAGCGGGTCTACTCACTCTTACTGGAGGACTGTCAAGATGTCACCAGCACCTGCCTAGCTGTCAAGGAGTG GTTTGTGTATCCTGGGAACCCACTGAGGCACCCGGACCTCGTCAGGCCGCTGCAGATGACCATTCCAGCTTCATCCAGGTCTTTAAAAGT CCTGAAGAATTCCTCCAGCAACGAGTGGACCGGTGAGACTGGCAAGGGAACCTTGCTGGACTCTGACGAGGGCAGCTTGAGCAGCGGCAC CCAGAGCAGCGGCTGCCCCACGGCTGAGGGCAGGCAGGACTCCAAGAGCACTTCTCCCGGGAAATACCCACACCCCGGCTTGGCAGATTT TGCCGACAATCTCATCAAAGAGAGTGACATCCTGAGCGATGAAGATGATGACCACCGTCAGACTGTGAAGCAGGGCAGCCCTACTAAAGA CATCGAAATTCAGTTCCAGAGACTGAGGATTTCCGAGGACCCAGACGTTCACCCCGAGGCTGAGCAGCAGCCTGGCCCGGAGTCGGGTGA GGGTCAGAAAGGAGGAGAGCAGCCCAAACTGGTCCGGGGGCACTTCTGCCCCATTAAACGAAAAGCCAACAGCACCAAGAGGGACAGAGG AACTTTGCTCAAGGCGCAGATCCGTCACCAGTCCCTTGACAGTCAGTCTGAAAATGCCACCATCGACCTAAATTCTGTTCTAGAGCGAGA ATTCAGTGTCCAGAGTTTAACATCTGTTGTCAGTGAGGAGTGTTTTTATGAAACAGAGAGCCACGGAAAATCATAGTATGATTCAATCCA GATATGGGTTAAATTCCTCATTTTACTTTTAAACTGGTGGTAAAGTGGAAATTGCAAAAAAAAAAAAAAAAAAAAACTGTTCATTCCTGG GTTTTGTGCAGTATACATTTTCCCACAAAATGGTTGTAAAGATTTAAGTTATTTTAATTTATTGTGGATCAGAAACCTAGATGAAACTGG TCAGAATCTGTAAATTACTTAGTTTATATCCACTTTGAGCAGGTATCAAATGATTTAGGATCCTTAAAATTACATTCTAATAATTAAGTT ATGTGGAAAAAGTAAGGCTGGGGAAGTCGTGATTAATAGTTTTCAAAGGGCCATTTTTTAAAATCCTCTGGGCATTTTCTTTCAGCTGTT TGTTAGTTTTTGCTTTATTTAAAGCATATTTAAGTTATTTTAATGTGGTTTAGGGGCAAAATGTGCAGATACTTCATTTTTGTAAGATAG ATTGTAATAGATGCTGTTTATACTAAACATGTCATAACTATCTATACAGTATATATTAAAAGAAAGCTTGTACTGTATCTTATTTGATGA >28423_28423_4_FAM120B-TIAM2_FAM120B_chr6_170639638_ENST00000540480_TIAM2_chr6_155577618_ENST00000461783_length(amino acids)=912AA_BP=700 MARAVTKEPLFQTLLSMDRQMILSRSSVMGVRGLQGFVGSTCPHICTVVNFKELAEHHRSKYPGCTPTIVVDAMCCLRYWYTPESWICGG QWREYFSALRDFVKTFTAAGIKLIFFFDGMVEQDKRDEWVKRRLKNNREISRIFHYIKSHKEQPGRNMFFIPSGLAVFTRFALKTLGQET LCSLQEADYEVASYGLQHNCLGILGEDTDYLIYDTCPYFSISELCLESLDTVMLCREKLCESLGLCVADLPLLACLLGNDIIPEGMFESF RYKCLSSYTSVKENFDKKGNIILAVSDHISKVLYLYQGEKKLEEILPLGPNKALFYKGMASYLLPGQKSPWFFQKPKGVITLDKQVISTS SDAESREEVPMCSDAESRQEVPMCTGPESRREVPVYTDSEPRQEVPMCSDPEPRQEVPTCTGPESRREVPMCSDPEPRQEVPMCTGPEAR QEVPMYTDSEPRQEVPMYTDSEPRQEVPMYTGSEPRQEVPMYTGPESRQEVPMYTGPESRQEVLIRTDPESRQEIMCTGHESKQEVPICT DPISKQEDSMCTHAEINQKLPVATDFEFKLEALMCTNPEIKQEDPTNVGPEVKQQVTMVSDTEILKVARTHHVQAESYLVYNIMSSGEIE CSNTLEDELDQALPSQAFIYRPIRQRVYSLLLEDCQDVTSTCLAVKEWFVYPGNPLRHPDLVRPLQMTIPASSRSLKVLKNSSSNEWTGE TGKGTLLDSDEGSLSSGTQSSGCPTAEGRQDSKSTSPGKYPHPGLADFADNLIKESDILSDEDDDHRQTVKQGSPTKDIEIQFQRLRISE DPDVHPEAEQQPGPESGEGQKGGEQPKLVRGHFCPIKRKANSTKRDRGTLLKAQIRHQSLDSQSENATIDLNSVLEREFSVQSLTSVVSE -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for FAM120B-TIAM2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for FAM120B-TIAM2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for FAM120B-TIAM2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |