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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:FBXO18-ITGA8 (FusionGDB2 ID:29765) |
Fusion Gene Summary for FBXO18-ITGA8 |
Fusion gene summary |
Fusion gene information | Fusion gene name: FBXO18-ITGA8 | Fusion gene ID: 29765 | Hgene | Tgene | Gene symbol | FBXO18 | ITGA8 | Gene ID | 84893 | 8516 |
Gene name | F-box DNA helicase 1 | integrin subunit alpha 8 | |
Synonyms | FBXO18|Fbx18|hFBH1 | - | |
Cytomap | 10p15.1 | 10p13 | |
Type of gene | protein-coding | protein-coding | |
Description | F-box DNA helicase 1F-box only protein, helicase, 18F-box protein, helicase, 18 | integrin alpha-8integrin, alpha 8 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | P53708 | |
Ensembl transtripts involved in fusion gene | ENST00000362091, ENST00000379999, ENST00000397269, ENST00000470089, | ENST00000477064, ENST00000378076, | |
Fusion gene scores | * DoF score | 3 X 3 X 3=27 | 6 X 6 X 4=144 |
# samples | 3 | 6 | |
** MAII score | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(6/144*10)=-1.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: FBXO18 [Title/Abstract] AND ITGA8 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | FBXO18(5960441)-ITGA8(15648421), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | FBXO18 | GO:0006974 | cellular response to DNA damage stimulus | 19736316|23319600|23361013|25585578 |
Hgene | FBXO18 | GO:0008219 | cell death | 23319600 |
Hgene | FBXO18 | GO:0016567 | protein ubiquitination | 25585578 |
Hgene | FBXO18 | GO:0031297 | replication fork processing | 25585578 |
Hgene | FBXO18 | GO:2000042 | negative regulation of double-strand break repair via homologous recombination | 19736316 |
Fusion gene breakpoints across FBXO18 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across ITGA8 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | KIRC | TCGA-B0-4688-01A | FBXO18 | chr10 | 5960441 | - | ITGA8 | chr10 | 15648421 | - |
ChimerDB4 | KIRC | TCGA-B0-4688-01A | FBXO18 | chr10 | 5960441 | + | ITGA8 | chr10 | 15648421 | - |
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Fusion Gene ORF analysis for FBXO18-ITGA8 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000362091 | ENST00000477064 | FBXO18 | chr10 | 5960441 | + | ITGA8 | chr10 | 15648421 | - |
5CDS-intron | ENST00000379999 | ENST00000477064 | FBXO18 | chr10 | 5960441 | + | ITGA8 | chr10 | 15648421 | - |
5CDS-intron | ENST00000397269 | ENST00000477064 | FBXO18 | chr10 | 5960441 | + | ITGA8 | chr10 | 15648421 | - |
In-frame | ENST00000362091 | ENST00000378076 | FBXO18 | chr10 | 5960441 | + | ITGA8 | chr10 | 15648421 | - |
In-frame | ENST00000379999 | ENST00000378076 | FBXO18 | chr10 | 5960441 | + | ITGA8 | chr10 | 15648421 | - |
In-frame | ENST00000397269 | ENST00000378076 | FBXO18 | chr10 | 5960441 | + | ITGA8 | chr10 | 15648421 | - |
intron-3CDS | ENST00000470089 | ENST00000378076 | FBXO18 | chr10 | 5960441 | + | ITGA8 | chr10 | 15648421 | - |
intron-intron | ENST00000470089 | ENST00000477064 | FBXO18 | chr10 | 5960441 | + | ITGA8 | chr10 | 15648421 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000397269 | FBXO18 | chr10 | 5960441 | + | ENST00000378076 | ITGA8 | chr10 | 15648421 | - | 6906 | 2269 | 169 | 3696 | 1175 |
ENST00000362091 | FBXO18 | chr10 | 5960441 | + | ENST00000378076 | ITGA8 | chr10 | 15648421 | - | 6852 | 2215 | 115 | 3642 | 1175 |
ENST00000379999 | FBXO18 | chr10 | 5960441 | + | ENST00000378076 | ITGA8 | chr10 | 15648421 | - | 6994 | 2357 | 89 | 3784 | 1231 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000397269 | ENST00000378076 | FBXO18 | chr10 | 5960441 | + | ITGA8 | chr10 | 15648421 | - | 0.000550455 | 0.99944955 |
ENST00000362091 | ENST00000378076 | FBXO18 | chr10 | 5960441 | + | ITGA8 | chr10 | 15648421 | - | 0.000394166 | 0.99960583 |
ENST00000379999 | ENST00000378076 | FBXO18 | chr10 | 5960441 | + | ITGA8 | chr10 | 15648421 | - | 0.000399753 | 0.99960023 |
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Fusion Genomic Features for FBXO18-ITGA8 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for FBXO18-ITGA8 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr10:5960441/chr10:15648421) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | ITGA8 |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Integrin alpha-8/beta-1 functions in the genesis of kidney and probably of other organs by regulating the recruitment of mesenchymal cells into epithelial structures. It recognizes the sequence R-G-D in a wide array of ligands including TNC, FN1, SPP1 TGFB1, TGFB3 and VTN. NPNT is probably its functional ligand in kidney genesis. Neuronal receptor for TNC it mediates cell-cell interactions and regulates neurite outgrowth of sensory and motor neurons. {ECO:0000269|PubMed:12415008, ECO:0000269|PubMed:15721307}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | FBXO18 | chr10:5960441 | chr10:15648421 | ENST00000362091 | + | 13 | 21 | 138_184 | 700 | 1044.0 | Domain | F-box |
Hgene | FBXO18 | chr10:5960441 | chr10:15648421 | ENST00000379999 | + | 14 | 22 | 138_184 | 751 | 1095.0 | Domain | F-box |
Hgene | FBXO18 | chr10:5960441 | chr10:15648421 | ENST00000379999 | + | 14 | 22 | 442_705 | 751 | 1095.0 | Domain | UvrD-like helicase ATP-binding |
Hgene | FBXO18 | chr10:5960441 | chr10:15648421 | ENST00000362091 | + | 13 | 21 | 57_64 | 700 | 1044.0 | Motif | PIP-box |
Hgene | FBXO18 | chr10:5960441 | chr10:15648421 | ENST00000379999 | + | 14 | 22 | 57_64 | 751 | 1095.0 | Motif | PIP-box |
Hgene | FBXO18 | chr10:5960441 | chr10:15648421 | ENST00000362091 | + | 13 | 21 | 463_470 | 700 | 1044.0 | Nucleotide binding | ATP |
Hgene | FBXO18 | chr10:5960441 | chr10:15648421 | ENST00000379999 | + | 14 | 22 | 463_470 | 751 | 1095.0 | Nucleotide binding | ATP |
Tgene | ITGA8 | chr10:5960441 | chr10:15648421 | ENST00000378076 | 16 | 30 | 1034_1063 | 588 | 1064.0 | Topological domain | Cytoplasmic | |
Tgene | ITGA8 | chr10:5960441 | chr10:15648421 | ENST00000378076 | 16 | 30 | 1013_1033 | 588 | 1064.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | FBXO18 | chr10:5960441 | chr10:15648421 | ENST00000362091 | + | 13 | 21 | 442_705 | 700 | 1044.0 | Domain | UvrD-like helicase ATP-binding |
Hgene | FBXO18 | chr10:5960441 | chr10:15648421 | ENST00000362091 | + | 13 | 21 | 807_811 | 700 | 1044.0 | Motif | APIM motif |
Hgene | FBXO18 | chr10:5960441 | chr10:15648421 | ENST00000379999 | + | 14 | 22 | 807_811 | 751 | 1095.0 | Motif | APIM motif |
Tgene | ITGA8 | chr10:5960441 | chr10:15648421 | ENST00000378076 | 16 | 30 | 329_337 | 588 | 1064.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA8 | chr10:5960441 | chr10:15648421 | ENST00000378076 | 16 | 30 | 395_403 | 588 | 1064.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA8 | chr10:5960441 | chr10:15648421 | ENST00000378076 | 16 | 30 | 459_467 | 588 | 1064.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA8 | chr10:5960441 | chr10:15648421 | ENST00000378076 | 16 | 30 | 455_457 | 588 | 1064.0 | Motif | Cell attachment site | |
Tgene | ITGA8 | chr10:5960441 | chr10:15648421 | ENST00000378076 | 16 | 30 | 122_183 | 588 | 1064.0 | Repeat | FG-GAP 2 | |
Tgene | ITGA8 | chr10:5960441 | chr10:15648421 | ENST00000378076 | 16 | 30 | 188_240 | 588 | 1064.0 | Repeat | FG-GAP 3 | |
Tgene | ITGA8 | chr10:5960441 | chr10:15648421 | ENST00000378076 | 16 | 30 | 253_306 | 588 | 1064.0 | Repeat | FG-GAP 4 | |
Tgene | ITGA8 | chr10:5960441 | chr10:15648421 | ENST00000378076 | 16 | 30 | 307_372 | 588 | 1064.0 | Repeat | FG-GAP 5 | |
Tgene | ITGA8 | chr10:5960441 | chr10:15648421 | ENST00000378076 | 16 | 30 | 373_431 | 588 | 1064.0 | Repeat | FG-GAP 6 | |
Tgene | ITGA8 | chr10:5960441 | chr10:15648421 | ENST00000378076 | 16 | 30 | 435_498 | 588 | 1064.0 | Repeat | FG-GAP 7 | |
Tgene | ITGA8 | chr10:5960441 | chr10:15648421 | ENST00000378076 | 16 | 30 | 44_105 | 588 | 1064.0 | Repeat | FG-GAP 1 | |
Tgene | ITGA8 | chr10:5960441 | chr10:15648421 | ENST00000378076 | 16 | 30 | 39_1012 | 588 | 1064.0 | Topological domain | Extracellular |
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Fusion Gene Sequence for FBXO18-ITGA8 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>29765_29765_1_FBXO18-ITGA8_FBXO18_chr10_5960441_ENST00000362091_ITGA8_chr10_15648421_ENST00000378076_length(transcript)=6852nt_BP=2215nt CTCGGGCTCCAGGTCCCGGCCAGAGGAGGAGCTCGCTGCCGGGGGACGCTGGGCTGAGCGGCCGGCGGCGCGGGCCCGGCGGCGGCGGCA GCGGGGTCCGGGTCCGGAGCGCCACATGAGACGGTTTAAGCGGAAGCATCTTACTGCCATTGACTGCCAGCATTTGGCTCGGAGTCACTT GGCTGTGACCCAGCCCTTCGGTCAAAGATGGACAAACAGAGATCCGAACCATGGTCTCTATCCTAAACCGAGAACAAAAAGAGGGAGTAG GGGTCAGGGAAGTCAAAGATGCATCCCTGAGTTCTTCCTAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAGCAATTCTGTTGG CCAGGACAGCTGTCAGGACTCTGAGGGTGACATGATCTTTCCTGCAGAGAGCAGCTGTGCACTGCCTCAGGAAGGCAGTGCAGGGCCGGG CTCACCAGGGTCTGCCCCGCCCTCCAGGAAGCGGTCTTGGTCCTCTGAGGAAGAGAGTAACCAGGCTACCGGGACCAGCCGGTGGGATGG AGTTTCTAAGAAAGCTCCACGGCACCATTTGTCTGTGCCATGCACAAGGCCTAGGGAGGCCAGGCAAGAAGCAGAGGACAGTACGTCTCG GCTCTCTGCGGAGTCTGGTGAAACCGACCAAGATGCTGGGGACGTGGGTCCTGATCCCATTCCTGACTCATACTATGGGCTTCTTGGGAC CTTGCCCTGCCAGGAAGCACTGAGCCACATTTGCAGCCTGCCTAGTGAGGTCCTGAGGCACGTGTTTGCCTTCCTCCCGGTGGAAGACCT CTATTGGAACCTGAGCTTGGTGTGCCACTTGTGGAGGGAGATCATCAGTGACCCGCTGTTCATTCCTTGGAAGAAGCTGTACCATCGATA CCTGATGAATGAAGAGCAAGCTGTCAGCAAAGTGGACGGCATCCTGTCTAACTGTGGCATAGAAAAGGAGTCAGACCTGTGTGTGCTGAA CCTCATACGATACACAGCCACCACTAAGTGCTCTCCGAGTGTGGATCCCGAGAGGGTGCTGTGGAGTCTGAGGGACCACCCCCTCCTCCC CGAGGCTGAGGCGTGTGTGCGGCAACACCTCCCCGACCTCTACGCTGCTGCCGGGGGTGTCAACATCTGGGCCCTGGTGGCGGCTGTGGT GCTCCTCTCCAGCAGTGTGAATGACATCCAGCGACTGCTCTTCTGCCTCCGGAGACCCAGCTCCACGGTGACCATGCCAGATGTCACCGA GACCCTGTACTGCATAGCCGTGCTTCTCTACGCCATGAGGGAGAAGGGGATTAACATCAGCAATAGGATTCACTACAACATTTTCTATTG CCTATATCTTCAGGAGAATTCCTGCACTCAGGCCACAAAAGTTAAAGAGGAGCCATCTGTCTGGCCAGGCAAGAAAACCATCCAACTTAC ACATGAACAACAGCTGATTCTGAATCACAAGATGGAACCTCTCCAGGTGGTGAAAATTATGGCCTTTGCCGGCACTGGGAAGACCTCAAC GCTGGTCAAGTATGCAGAGAAGTGGTCTCAGAGCAGGTTTCTGTATGTGACATTCAACAAGAGCATCGCAAAGCAGGCCGAACGCGTCTT CCCCAGCAACGTCATCTGCAAAACCTTCCACTCCATGGCCTACGGGCACATAGGGCGGAAGTACCAGTCAAAGAAGAAGTTGAATCTCTT CAAGTTAACACCCTTCATGGTCAACTCCGTCCTTGCTGAAGGGAAGGGTGGATTCATAAGAGCCAAGCTTGTGTGTAAGACTCTAGAAAA CTTCTTTGCCTCGGCTGACGAAGAGCTGACCATTGATCACGTGCCTATTTGGTGTAAGAACAGCCAAGGACAGAGAGTCATGGTTGAGCA GAGTGAAAAACTGAATGGTGTCCTTGAAGCGAGCCGCCTCTGGGATAACATGCGGAAGCTGGGGGAGTGCACAGAAGAGGCGCACCAGAT GACTCATGACGGCTACTTGAAACTCTGGCAGCTGAGCAAGCCTTCGCTGGCCTCTTTTGACGCCATCTTTGTGGATGAGGCCCAGGACTG CACACCAGCTATCATGAACATAGTTCTGTCTCAGCCATGTGGGAAAATCTTTGTAGGGGACCCGCACCAGCAGATCTATACCTTCCGGGG TGCGGTCAACGCCCTGTTCACAGTGCCCCACACCCACGTCTTCTATCTCACGCAGGATGAAACTGAATTCCGAGATAAATTATCTCCAAT CAACATTAGTTTGAATTACAGTTTGGACGAATCCACCTTTAAAGAAGGCCTGGAAGTGAAACCAATATTGAACTACTACAGAGAAAACAT TGTTAGTGAACAGGCTCACATTCTGGTGGACTGTGGAGAAGACAATCTGTGTGTTCCTGACTTGAAGCTGTCGGCTAGACCAGATAAGCA TCAGGTAATCATTGGAGATGAAAATCACCTTATGCTCATAATAAATGCAAGAAATGAAGGGGAAGGAGCATATGAAGCTGAACTCTTTGT AATGATACCAGAAGAGGCAGATTATGTTGGAATCGAACGCAACAACAAGGGATTTCGACCACTGAGCTGTGAGTACAAGATGGAAAATGT AACCAGGATGGTGGTGTGTGACCTTGGGAACCCTATGGTGTCTGGAACAAATTATTCCCTGGGCCTCCGATTTGCAGTTCCACGTCTTGA GAAAACAAACATGAGCATTAACTTCGATCTCCAAATCAGAAGTTCCAACAAGGACAATCCAGACAGCAATTTTGTGAGCCTGCAAATCAA CATCACTGCTGTAGCGCAGGTGGAAATAAGAGGAGTGTCACACCCTCCGCAGATTGTTCTGCCCATTCATAACTGGGAACCAGAAGAGGA GCCCCACAAAGAGGAGGAGGTTGGACCATTGGTGGAACATATTTATGAGCTGCACAATATTGGACCAAGTACCATCAGTGACACCATCCT GGAGGTGGGCTGGCCTTTCTCTGCCCGGGATGAATTTCTTCTCTATATTTTCCATATTCAAACTCTGGGACCTCTGCAGTGCCAACCAAA TCCTAATATCAATCCACAGGATATAAAGCCTGCTGCCTCCCCAGAGGACACCCCTGAGCTCAGCGCCTTTTTGCGAAACTCTACTATTCC TCATCTTGTCAGGAAGAGGGATGTACATGTGGTCGAATTCCACAGACAGAGCCCTGCAAAAATACTGAATTGTACAAATATCGAGTGTTT ACAAATCTCCTGTGCAGTGGGACGACTCGAAGGAGGAGAAAGCGCAGTCCTGAAAGTCAGGTCACGATTATGGGCCCACACCTTCCTCCA GAGAAAAAATGATCCCTATGCTCTTGCATCCCTGGTGTCCTTTGAAGTTAAGAAGATGCCTTATACAGATCAGCCAGCAAAACTCCCAGA AGGAAGCATAGTAATTAAGACATCAGTTATTTGGGCAACTCCGAATGTTTCCTTCTCAATCCCATTATGGGTAATAATACTAGCAATACT TCTTGGATTGTTGGTTCTCGCCATTTTAACCTTAGCTTTATGGAAGTGTGGATTCTTTGACAGAGCCAGACCTCCTCAGGAGGACATGAC CGACAGGGAACAGCTGACAAATGACAAGACCCCTGAGGCATGACAAGAAAAAAAAAGAAGACCAAAGACCTCAAACACTGGTCCTGTTCA AAGAAAAAGAAAGAACATGAGGGTTAAAAATCAAAGCTTTCTGATACCTGACAGTGACCCAGGAAATGGAGGGGACCCTGGAAACATCAC CTCATCTACACCGCACTTTGGAGAAATTGTCCTGGGTGCCCAGTGAGCCCTGTTGGAAAAGGAAACACCAAAGCTGGAGAAGCCATCAGC AATTGTGGAAGATTTTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGAACGTAAGTTGCAGTCCAGATCA ATCCAGCATAAGTTGCAGAGATGAAATGTCTGAATCACTATAGAATTTACAAGGTGAACTAAGGTGAAATGACTGATTTACTATAGAACT TAGAACTAAGACCACACCATCCAACACTACTGTATCCAATGGAACATTTGACACCTCCCTATGGAAAAGAAACATTTCTAAGGACATTAT GGCTCAGGGAGACAAGCAATATGTTGTTGGTACTGTGAAAGTACTTTTGAAAGGACAAAAATAATCTTGTGAGTGAGGGTGAGAGTTTAT TTATTTATTTTCCATGTCTCTAGGTTGAGAATCTGTCATCTAGAGAATTTGGAAATTAAGATTTGGTTAGCTAGTTTTCAAAATCACTCA CTCAGTTTCCTCCTAAGAACCACTGTGTGCAGATAACTCATTTAGCAGAGCTTCTTCAGAATTTAGACAGTGCTAAGGAAAGGAAGATTG GCATTAGGAATCAGTTCTATTTAATACCTTGCTGCCTTCCATCTGAAATTCCTTTCACTCACATTATCCAGGGACTCACATCTGCTTAAT TTAGCTTTGCAAGATGTTGCATTTATATTTCCTTGTATATCTTTCCATTGACTTAGTTAATACATGAATTTCGAGGTACTCTCTACCTTT GGAGTGTTTAAAAGTCATGGTAAAATGTCTAGAGTTCATTAATTAAAAAGCAATTTAACATTATGGGTAAACATTATTTTTAATATCTAT AAGAAGCAACACTTCTTATAGATATTTAGCTTGGGATTAAATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACAT GTTGAATATAACTTAGACAAAAACATAAAATTATACAGGCATGAGCCAAACTGGGAAAACTGATTCCTAAAGATTTTTATTTAAAATTGC TTATTCCAACTTTATTACTTATTTTTACTGCTAATCTTTATAATATGTAACTTTGGAGAATAATCTTTTATTTAAGCTATTTTCCCATCA TCTTGAATTTAACCATCACAAATTTTTTATGTTTAAAACTCTTGTAAATAATTCATAATCTTGTAATATTATCATTTTTGAAGTAAAATT GACCAGCCAAATTTATAGGTAGTCTGCACAATTTTGTATCCTTTTTTAATAATGAAAAATTACTATGAAGAAATACTGAACAAATTTTTA TGTGCAATATTTTATAGACCTATGTATCTGAAGCATGTTTACACTGGCGTTTTTTTTTTTAATTAATTTCCTAAATGTTAAGTATGATAG AACAAGCTGACCCAAATCCTTAAGTTTACAAAGCTGTTGGAAAACTTTGTGTCCTGATTTCAACAATCACGCTTTGTTTGAAAGATGAGC CAAGCTCACAGACACTAAATTTTATGTCATGCCATAAGCTGGAGAGGAGCCATTTGGCTACAGCTGCGGAACTTCATTGAGGAGCAAATG AAAGGCACATGGACGAGCACGCTGGTGCAGTTCATGTTCTTCCTGCCTGTGAATTGAATACTGTCCTGGTAGCAGTTTCGGGTCGGTCAG GAGCTCAAGGCTGGTTTGTGTGGCTGACTACGGATGAGCACTGAAGTTGCCTCAAAGAATTAAGGGGTGTCCACACCAGCCTCTGGGGGT CTTTGGTGTTAGTCTTCCAGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGATGCCAGACAGCTCTCTCT GACCCCAGGTAATGCCCTGAATCTGGTGATCCTGGCTGATCTGTGACCAATAGAGATTAGCTCCTTGGGATTTGGGGTCCTAAAAGGTCC CTGAAAAAATGCACCCCTTGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAAAAAGACCCCTGTTGAGAT AGTTTATGCAGATACCTGGAAGGAACTAGAGATGCCAGGAGGAAGACTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAAC TGCACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACCTATGGGAAT TGCAGAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATATGGAAGCAAAGTCTGGGTGCAGTGACTCACAC TTGTAATCCCAACACTTTGGGAGGCCGAGACGGGCAGATCACCTGAGTTCAGGAGTTCAAGACCAGCCTGGCCAACGTGGCAAAACCCCA TCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCAGTCTCCTGTAATCCCAGCTACCTAGGAGGCTGAGGCAGAGAGAGAATCGC TTGAACCCAGGAGGCGGAGGTTGCAGTGAGCTGAGATCGCGCGACTGCACTCCAGCCTGGGCGACAGAGGGAAACTCTGTCTCAACAAAA AAATAAATAAAATAAAAAATAAAAAAAGAATATGGAAGCAAATGGAGAAAGGGAGGAAACTGAGGTCAGGCAAACCTTCCAGCAATCCGT TCTGCCCAGAGAACATACTGACGACAGAGAACACACTGAGCGTTATCTGCTTCTAGTTAGAGCATTGCCGATTGCCTTCATAATTCATAA TGTGCTGTGCTCCTCTGAGGGTCTATCTGTATTTCTCTTCAAAGAATTCCCTTTTTAAATTCTTGCAGCTGGGTTTTAAGACACAATAAT GGGGCAAATTAAGTTTTATAAACTTGGAGATTTTTATACAGTAAATAAAAAAATAATATGTACTAGTCACCCCTGAAACTGCATTCTTAG AACTCGACTCTTGTTTTATTTAAATACGTGCGTAGATATCTGTGAAGATTTTCATGTACCTATTTACCTTGTCACTAATAAAATTAAAAC >29765_29765_1_FBXO18-ITGA8_FBXO18_chr10_5960441_ENST00000362091_ITGA8_chr10_15648421_ENST00000378076_length(amino acids)=1175AA_BP=700 MRRFKRKHLTAIDCQHLARSHLAVTQPFGQRWTNRDPNHGLYPKPRTKRGSRGQGSQRCIPEFFLAGKQPCTNDMAKSNSVGQDSCQDSE GDMIFPAESSCALPQEGSAGPGSPGSAPPSRKRSWSSEEESNQATGTSRWDGVSKKAPRHHLSVPCTRPREARQEAEDSTSRLSAESGET DQDAGDVGPDPIPDSYYGLLGTLPCQEALSHICSLPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDPLFIPWKKLYHRYLMNEEQAV SKVDGILSNCGIEKESDLCVLNLIRYTATTKCSPSVDPERVLWSLRDHPLLPEAEACVRQHLPDLYAAAGGVNIWALVAAVVLLSSSVND IQRLLFCLRRPSSTVTMPDVTETLYCIAVLLYAMREKGINISNRIHYNIFYCLYLQENSCTQATKVKEEPSVWPGKKTIQLTHEQQLILN HKMEPLQVVKIMAFAGTGKTSTLVKYAEKWSQSRFLYVTFNKSIAKQAERVFPSNVICKTFHSMAYGHIGRKYQSKKKLNLFKLTPFMVN SVLAEGKGGFIRAKLVCKTLENFFASADEELTIDHVPIWCKNSQGQRVMVEQSEKLNGVLEASRLWDNMRKLGECTEEAHQMTHDGYLKL WQLSKPSLASFDAIFVDEAQDCTPAIMNIVLSQPCGKIFVGDPHQQIYTFRGAVNALFTVPHTHVFYLTQDETEFRDKLSPINISLNYSL DESTFKEGLEVKPILNYYRENIVSEQAHILVDCGEDNLCVPDLKLSARPDKHQVIIGDENHLMLIINARNEGEGAYEAELFVMIPEEADY VGIERNNKGFRPLSCEYKMENVTRMVVCDLGNPMVSGTNYSLGLRFAVPRLEKTNMSINFDLQIRSSNKDNPDSNFVSLQINITAVAQVE IRGVSHPPQIVLPIHNWEPEEEPHKEEEVGPLVEHIYELHNIGPSTISDTILEVGWPFSARDEFLLYIFHIQTLGPLQCQPNPNINPQDI KPAASPEDTPELSAFLRNSTIPHLVRKRDVHVVEFHRQSPAKILNCTNIECLQISCAVGRLEGGESAVLKVRSRLWAHTFLQRKNDPYAL ASLVSFEVKKMPYTDQPAKLPEGSIVIKTSVIWATPNVSFSIPLWVIILAILLGLLVLAILTLALWKCGFFDRARPPQEDMTDREQLTND -------------------------------------------------------------- >29765_29765_2_FBXO18-ITGA8_FBXO18_chr10_5960441_ENST00000379999_ITGA8_chr10_15648421_ENST00000378076_length(transcript)=6994nt_BP=2357nt CTGCTTTCAAGGTGTCTAGATACAGAGTGAAGAATGTCACAGTAGGAAGTGCACTGGACTAGGGGAGTCAGGAGACCCGGGTTCTTGTGT TGGCACCATCACTCATGAGCTACGAGGTGACTTCAGGCTGCCATTGGACCTGTCAAGTGCCTGAGTCATGTGATAATGGGCTACATTGCG CAGGGCCCCTGGGCCATCTCCACAGGAGATGCCAGAGGACGAGTGCCCACTTGCTGGTCTTCACAGAGCACGCTGAAATGAGACGGTTTA AGCGGAAGCATCTTACTGCCATTGACTGCCAGCATTTGGCTCGGAGTCACTTGGCTGTGACCCAGCCCTTCGGTCAAAGATGGACAAACA GAGATCCGAACCATGGTCTCTATCCTAAACCGAGAACAAAAAGAGGGAGTAGGGGTCAGGGAAGTCAAAGATGCATCCCTGAGTTCTTCC TAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAGCAATTCTGTTGGCCAGGACAGCTGTCAGGACTCTGAGGGTGACATGATCT TTCCTGCAGAGAGCAGCTGTGCACTGCCTCAGGAAGGCAGTGCAGGGCCGGGCTCACCAGGGTCTGCCCCGCCCTCCAGGAAGCGGTCTT GGTCCTCTGAGGAAGAGAGTAACCAGGCTACCGGGACCAGCCGGTGGGATGGAGTTTCTAAGAAAGCTCCACGGCACCATTTGTCTGTGC CATGCACAAGGCCTAGGGAGGCCAGGCAAGAAGCAGAGGACAGTACGTCTCGGCTCTCTGCGGAGTCTGGTGAAACCGACCAAGATGCTG GGGACGTGGGTCCTGATCCCATTCCTGACTCATACTATGGGCTTCTTGGGACCTTGCCCTGCCAGGAAGCACTGAGCCACATTTGCAGCC TGCCTAGTGAGGTCCTGAGGCACGTGTTTGCCTTCCTCCCGGTGGAAGACCTCTATTGGAACCTGAGCTTGGTGTGCCACTTGTGGAGGG AGATCATCAGTGACCCGCTGTTCATTCCTTGGAAGAAGCTGTACCATCGATACCTGATGAATGAAGAGCAAGCTGTCAGCAAAGTGGACG GCATCCTGTCTAACTGTGGCATAGAAAAGGAGTCAGACCTGTGTGTGCTGAACCTCATACGATACACAGCCACCACTAAGTGCTCTCCGA GTGTGGATCCCGAGAGGGTGCTGTGGAGTCTGAGGGACCACCCCCTCCTCCCCGAGGCTGAGGCGTGTGTGCGGCAACACCTCCCCGACC TCTACGCTGCTGCCGGGGGTGTCAACATCTGGGCCCTGGTGGCGGCTGTGGTGCTCCTCTCCAGCAGTGTGAATGACATCCAGCGACTGC TCTTCTGCCTCCGGAGACCCAGCTCCACGGTGACCATGCCAGATGTCACCGAGACCCTGTACTGCATAGCCGTGCTTCTCTACGCCATGA GGGAGAAGGGGATTAACATCAGCAATAGGATTCACTACAACATTTTCTATTGCCTATATCTTCAGGAGAATTCCTGCACTCAGGCCACAA AAGTTAAAGAGGAGCCATCTGTCTGGCCAGGCAAGAAAACCATCCAACTTACACATGAACAACAGCTGATTCTGAATCACAAGATGGAAC CTCTCCAGGTGGTGAAAATTATGGCCTTTGCCGGCACTGGGAAGACCTCAACGCTGGTCAAGTATGCAGAGAAGTGGTCTCAGAGCAGGT TTCTGTATGTGACATTCAACAAGAGCATCGCAAAGCAGGCCGAACGCGTCTTCCCCAGCAACGTCATCTGCAAAACCTTCCACTCCATGG CCTACGGGCACATAGGGCGGAAGTACCAGTCAAAGAAGAAGTTGAATCTCTTCAAGTTAACACCCTTCATGGTCAACTCCGTCCTTGCTG AAGGGAAGGGTGGATTCATAAGAGCCAAGCTTGTGTGTAAGACTCTAGAAAACTTCTTTGCCTCGGCTGACGAAGAGCTGACCATTGATC ACGTGCCTATTTGGTGTAAGAACAGCCAAGGACAGAGAGTCATGGTTGAGCAGAGTGAAAAACTGAATGGTGTCCTTGAAGCGAGCCGCC TCTGGGATAACATGCGGAAGCTGGGGGAGTGCACAGAAGAGGCGCACCAGATGACTCATGACGGCTACTTGAAACTCTGGCAGCTGAGCA AGCCTTCGCTGGCCTCTTTTGACGCCATCTTTGTGGATGAGGCCCAGGACTGCACACCAGCTATCATGAACATAGTTCTGTCTCAGCCAT GTGGGAAAATCTTTGTAGGGGACCCGCACCAGCAGATCTATACCTTCCGGGGTGCGGTCAACGCCCTGTTCACAGTGCCCCACACCCACG TCTTCTATCTCACGCAGGATGAAACTGAATTCCGAGATAAATTATCTCCAATCAACATTAGTTTGAATTACAGTTTGGACGAATCCACCT TTAAAGAAGGCCTGGAAGTGAAACCAATATTGAACTACTACAGAGAAAACATTGTTAGTGAACAGGCTCACATTCTGGTGGACTGTGGAG AAGACAATCTGTGTGTTCCTGACTTGAAGCTGTCGGCTAGACCAGATAAGCATCAGGTAATCATTGGAGATGAAAATCACCTTATGCTCA TAATAAATGCAAGAAATGAAGGGGAAGGAGCATATGAAGCTGAACTCTTTGTAATGATACCAGAAGAGGCAGATTATGTTGGAATCGAAC GCAACAACAAGGGATTTCGACCACTGAGCTGTGAGTACAAGATGGAAAATGTAACCAGGATGGTGGTGTGTGACCTTGGGAACCCTATGG TGTCTGGAACAAATTATTCCCTGGGCCTCCGATTTGCAGTTCCACGTCTTGAGAAAACAAACATGAGCATTAACTTCGATCTCCAAATCA GAAGTTCCAACAAGGACAATCCAGACAGCAATTTTGTGAGCCTGCAAATCAACATCACTGCTGTAGCGCAGGTGGAAATAAGAGGAGTGT CACACCCTCCGCAGATTGTTCTGCCCATTCATAACTGGGAACCAGAAGAGGAGCCCCACAAAGAGGAGGAGGTTGGACCATTGGTGGAAC ATATTTATGAGCTGCACAATATTGGACCAAGTACCATCAGTGACACCATCCTGGAGGTGGGCTGGCCTTTCTCTGCCCGGGATGAATTTC TTCTCTATATTTTCCATATTCAAACTCTGGGACCTCTGCAGTGCCAACCAAATCCTAATATCAATCCACAGGATATAAAGCCTGCTGCCT CCCCAGAGGACACCCCTGAGCTCAGCGCCTTTTTGCGAAACTCTACTATTCCTCATCTTGTCAGGAAGAGGGATGTACATGTGGTCGAAT TCCACAGACAGAGCCCTGCAAAAATACTGAATTGTACAAATATCGAGTGTTTACAAATCTCCTGTGCAGTGGGACGACTCGAAGGAGGAG AAAGCGCAGTCCTGAAAGTCAGGTCACGATTATGGGCCCACACCTTCCTCCAGAGAAAAAATGATCCCTATGCTCTTGCATCCCTGGTGT CCTTTGAAGTTAAGAAGATGCCTTATACAGATCAGCCAGCAAAACTCCCAGAAGGAAGCATAGTAATTAAGACATCAGTTATTTGGGCAA CTCCGAATGTTTCCTTCTCAATCCCATTATGGGTAATAATACTAGCAATACTTCTTGGATTGTTGGTTCTCGCCATTTTAACCTTAGCTT TATGGAAGTGTGGATTCTTTGACAGAGCCAGACCTCCTCAGGAGGACATGACCGACAGGGAACAGCTGACAAATGACAAGACCCCTGAGG CATGACAAGAAAAAAAAAGAAGACCAAAGACCTCAAACACTGGTCCTGTTCAAAGAAAAAGAAAGAACATGAGGGTTAAAAATCAAAGCT TTCTGATACCTGACAGTGACCCAGGAAATGGAGGGGACCCTGGAAACATCACCTCATCTACACCGCACTTTGGAGAAATTGTCCTGGGTG CCCAGTGAGCCCTGTTGGAAAAGGAAACACCAAAGCTGGAGAAGCCATCAGCAATTGTGGAAGATTTTCTTTTGCTTTAATCGTTCTGTA CTTGGCAGACACTTTGAAATGCGTATGGGAACGTAAGTTGCAGTCCAGATCAATCCAGCATAAGTTGCAGAGATGAAATGTCTGAATCAC TATAGAATTTACAAGGTGAACTAAGGTGAAATGACTGATTTACTATAGAACTTAGAACTAAGACCACACCATCCAACACTACTGTATCCA ATGGAACATTTGACACCTCCCTATGGAAAAGAAACATTTCTAAGGACATTATGGCTCAGGGAGACAAGCAATATGTTGTTGGTACTGTGA AAGTACTTTTGAAAGGACAAAAATAATCTTGTGAGTGAGGGTGAGAGTTTATTTATTTATTTTCCATGTCTCTAGGTTGAGAATCTGTCA TCTAGAGAATTTGGAAATTAAGATTTGGTTAGCTAGTTTTCAAAATCACTCACTCAGTTTCCTCCTAAGAACCACTGTGTGCAGATAACT CATTTAGCAGAGCTTCTTCAGAATTTAGACAGTGCTAAGGAAAGGAAGATTGGCATTAGGAATCAGTTCTATTTAATACCTTGCTGCCTT CCATCTGAAATTCCTTTCACTCACATTATCCAGGGACTCACATCTGCTTAATTTAGCTTTGCAAGATGTTGCATTTATATTTCCTTGTAT ATCTTTCCATTGACTTAGTTAATACATGAATTTCGAGGTACTCTCTACCTTTGGAGTGTTTAAAAGTCATGGTAAAATGTCTAGAGTTCA TTAATTAAAAAGCAATTTAACATTATGGGTAAACATTATTTTTAATATCTATAAGAAGCAACACTTCTTATAGATATTTAGCTTGGGATT AAATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTTGAATATAACTTAGACAAAAACATAAAATTATACAG GCATGAGCCAAACTGGGAAAACTGATTCCTAAAGATTTTTATTTAAAATTGCTTATTCCAACTTTATTACTTATTTTTACTGCTAATCTT TATAATATGTAACTTTGGAGAATAATCTTTTATTTAAGCTATTTTCCCATCATCTTGAATTTAACCATCACAAATTTTTTATGTTTAAAA CTCTTGTAAATAATTCATAATCTTGTAATATTATCATTTTTGAAGTAAAATTGACCAGCCAAATTTATAGGTAGTCTGCACAATTTTGTA TCCTTTTTTAATAATGAAAAATTACTATGAAGAAATACTGAACAAATTTTTATGTGCAATATTTTATAGACCTATGTATCTGAAGCATGT TTACACTGGCGTTTTTTTTTTTAATTAATTTCCTAAATGTTAAGTATGATAGAACAAGCTGACCCAAATCCTTAAGTTTACAAAGCTGTT GGAAAACTTTGTGTCCTGATTTCAACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTATGTCATGCCATAAG CTGGAGAGGAGCCATTTGGCTACAGCTGCGGAACTTCATTGAGGAGCAAATGAAAGGCACATGGACGAGCACGCTGGTGCAGTTCATGTT CTTCCTGCCTGTGAATTGAATACTGTCCTGGTAGCAGTTTCGGGTCGGTCAGGAGCTCAAGGCTGGTTTGTGTGGCTGACTACGGATGAG CACTGAAGTTGCCTCAAAGAATTAAGGGGTGTCCACACCAGCCTCTGGGGGTCTTTGGTGTTAGTCTTCCAGGTAGAGCTGGTTTTACAA GTAGGTGGCCATCTACAGGATGTGATGTGAGCGATGCCAGACAGCTCTCTCTGACCCCAGGTAATGCCCTGAATCTGGTGATCCTGGCTG ATCTGTGACCAATAGAGATTAGCTCCTTGGGATTTGGGGTCCTAAAAGGTCCCTGAAAAAATGCACCCCTTGTCTTTAAGCCAACATTGG TGAAGGAACTGAGAACTCTTAGGGTTACATAAAAAAAGACCCCTGTTGAGATAGTTTATGCAGATACCTGGAAGGAACTAGAGATGCCAG GAGGAAGACTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCC TAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGCACGCAGTG GCCCTCTGCCCTTTAGAATATGGAAGCAAAGTCTGGGTGCAGTGACTCACACTTGTAATCCCAACACTTTGGGAGGCCGAGACGGGCAGA TCACCTGAGTTCAGGAGTTCAAGACCAGCCTGGCCAACGTGGCAAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGG CAGTCTCCTGTAATCCCAGCTACCTAGGAGGCTGAGGCAGAGAGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCTGAGATC GCGCGACTGCACTCCAGCCTGGGCGACAGAGGGAAACTCTGTCTCAACAAAAAAATAAATAAAATAAAAAATAAAAAAAGAATATGGAAG CAAATGGAGAAAGGGAGGAAACTGAGGTCAGGCAAACCTTCCAGCAATCCGTTCTGCCCAGAGAACATACTGACGACAGAGAACACACTG AGCGTTATCTGCTTCTAGTTAGAGCATTGCCGATTGCCTTCATAATTCATAATGTGCTGTGCTCCTCTGAGGGTCTATCTGTATTTCTCT TCAAAGAATTCCCTTTTTAAATTCTTGCAGCTGGGTTTTAAGACACAATAATGGGGCAAATTAAGTTTTATAAACTTGGAGATTTTTATA CAGTAAATAAAAAAATAATATGTACTAGTCACCCCTGAAACTGCATTCTTAGAACTCGACTCTTGTTTTATTTAAATACGTGCGTAGATA >29765_29765_2_FBXO18-ITGA8_FBXO18_chr10_5960441_ENST00000379999_ITGA8_chr10_15648421_ENST00000378076_length(amino acids)=1231AA_BP=756 MAPSLMSYEVTSGCHWTCQVPESCDNGLHCAGPLGHLHRRCQRTSAHLLVFTEHAEMRRFKRKHLTAIDCQHLARSHLAVTQPFGQRWTN RDPNHGLYPKPRTKRGSRGQGSQRCIPEFFLAGKQPCTNDMAKSNSVGQDSCQDSEGDMIFPAESSCALPQEGSAGPGSPGSAPPSRKRS WSSEEESNQATGTSRWDGVSKKAPRHHLSVPCTRPREARQEAEDSTSRLSAESGETDQDAGDVGPDPIPDSYYGLLGTLPCQEALSHICS LPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDPLFIPWKKLYHRYLMNEEQAVSKVDGILSNCGIEKESDLCVLNLIRYTATTKCSP SVDPERVLWSLRDHPLLPEAEACVRQHLPDLYAAAGGVNIWALVAAVVLLSSSVNDIQRLLFCLRRPSSTVTMPDVTETLYCIAVLLYAM REKGINISNRIHYNIFYCLYLQENSCTQATKVKEEPSVWPGKKTIQLTHEQQLILNHKMEPLQVVKIMAFAGTGKTSTLVKYAEKWSQSR FLYVTFNKSIAKQAERVFPSNVICKTFHSMAYGHIGRKYQSKKKLNLFKLTPFMVNSVLAEGKGGFIRAKLVCKTLENFFASADEELTID HVPIWCKNSQGQRVMVEQSEKLNGVLEASRLWDNMRKLGECTEEAHQMTHDGYLKLWQLSKPSLASFDAIFVDEAQDCTPAIMNIVLSQP CGKIFVGDPHQQIYTFRGAVNALFTVPHTHVFYLTQDETEFRDKLSPINISLNYSLDESTFKEGLEVKPILNYYRENIVSEQAHILVDCG EDNLCVPDLKLSARPDKHQVIIGDENHLMLIINARNEGEGAYEAELFVMIPEEADYVGIERNNKGFRPLSCEYKMENVTRMVVCDLGNPM VSGTNYSLGLRFAVPRLEKTNMSINFDLQIRSSNKDNPDSNFVSLQINITAVAQVEIRGVSHPPQIVLPIHNWEPEEEPHKEEEVGPLVE HIYELHNIGPSTISDTILEVGWPFSARDEFLLYIFHIQTLGPLQCQPNPNINPQDIKPAASPEDTPELSAFLRNSTIPHLVRKRDVHVVE FHRQSPAKILNCTNIECLQISCAVGRLEGGESAVLKVRSRLWAHTFLQRKNDPYALASLVSFEVKKMPYTDQPAKLPEGSIVIKTSVIWA -------------------------------------------------------------- >29765_29765_3_FBXO18-ITGA8_FBXO18_chr10_5960441_ENST00000397269_ITGA8_chr10_15648421_ENST00000378076_length(transcript)=6906nt_BP=2269nt ACAGCCCCGGCCTGCCCCGCGTGGGAGAAGCCGCGGTTCCGGGCACGGGGCGGTTTTTCCTCAGGGACGGAGCGGTCCGGGATGAGCACG GAGGGGCCTGGGGATCCGAGAGCGCTGGCGTCCGCCGTCCTGGAGCTGCAGCGGCCCGTACGTGATTCGGGACTGAACACTGAGACGGTT TAAGCGGAAGCATCTTACTGCCATTGACTGCCAGCATTTGGCTCGGAGTCACTTGGCTGTGACCCAGCCCTTCGGTCAAAGATGGACAAA CAGAGATCCGAACCATGGTCTCTATCCTAAACCGAGAACAAAAAGAGGGAGTAGGGGTCAGGGAAGTCAAAGATGCATCCCTGAGTTCTT CCTAGCAGGCAAGCAGCCGTGCACCAATGACATGGCCAAAAGCAATTCTGTTGGCCAGGACAGCTGTCAGGACTCTGAGGGTGACATGAT CTTTCCTGCAGAGAGCAGCTGTGCACTGCCTCAGGAAGGCAGTGCAGGGCCGGGCTCACCAGGGTCTGCCCCGCCCTCCAGGAAGCGGTC TTGGTCCTCTGAGGAAGAGAGTAACCAGGCTACCGGGACCAGCCGGTGGGATGGAGTTTCTAAGAAAGCTCCACGGCACCATTTGTCTGT GCCATGCACAAGGCCTAGGGAGGCCAGGCAAGAAGCAGAGGACAGTACGTCTCGGCTCTCTGCGGAGTCTGGTGAAACCGACCAAGATGC TGGGGACGTGGGTCCTGATCCCATTCCTGACTCATACTATGGGCTTCTTGGGACCTTGCCCTGCCAGGAAGCACTGAGCCACATTTGCAG CCTGCCTAGTGAGGTCCTGAGGCACGTGTTTGCCTTCCTCCCGGTGGAAGACCTCTATTGGAACCTGAGCTTGGTGTGCCACTTGTGGAG GGAGATCATCAGTGACCCGCTGTTCATTCCTTGGAAGAAGCTGTACCATCGATACCTGATGAATGAAGAGCAAGCTGTCAGCAAAGTGGA CGGCATCCTGTCTAACTGTGGCATAGAAAAGGAGTCAGACCTGTGTGTGCTGAACCTCATACGATACACAGCCACCACTAAGTGCTCTCC GAGTGTGGATCCCGAGAGGGTGCTGTGGAGTCTGAGGGACCACCCCCTCCTCCCCGAGGCTGAGGCGTGTGTGCGGCAACACCTCCCCGA CCTCTACGCTGCTGCCGGGGGTGTCAACATCTGGGCCCTGGTGGCGGCTGTGGTGCTCCTCTCCAGCAGTGTGAATGACATCCAGCGACT GCTCTTCTGCCTCCGGAGACCCAGCTCCACGGTGACCATGCCAGATGTCACCGAGACCCTGTACTGCATAGCCGTGCTTCTCTACGCCAT GAGGGAGAAGGGGATTAACATCAGCAATAGGATTCACTACAACATTTTCTATTGCCTATATCTTCAGGAGAATTCCTGCACTCAGGCCAC AAAAGTTAAAGAGGAGCCATCTGTCTGGCCAGGCAAGAAAACCATCCAACTTACACATGAACAACAGCTGATTCTGAATCACAAGATGGA ACCTCTCCAGGTGGTGAAAATTATGGCCTTTGCCGGCACTGGGAAGACCTCAACGCTGGTCAAGTATGCAGAGAAGTGGTCTCAGAGCAG GTTTCTGTATGTGACATTCAACAAGAGCATCGCAAAGCAGGCCGAACGCGTCTTCCCCAGCAACGTCATCTGCAAAACCTTCCACTCCAT GGCCTACGGGCACATAGGGCGGAAGTACCAGTCAAAGAAGAAGTTGAATCTCTTCAAGTTAACACCCTTCATGGTCAACTCCGTCCTTGC TGAAGGGAAGGGTGGATTCATAAGAGCCAAGCTTGTGTGTAAGACTCTAGAAAACTTCTTTGCCTCGGCTGACGAAGAGCTGACCATTGA TCACGTGCCTATTTGGTGTAAGAACAGCCAAGGACAGAGAGTCATGGTTGAGCAGAGTGAAAAACTGAATGGTGTCCTTGAAGCGAGCCG CCTCTGGGATAACATGCGGAAGCTGGGGGAGTGCACAGAAGAGGCGCACCAGATGACTCATGACGGCTACTTGAAACTCTGGCAGCTGAG CAAGCCTTCGCTGGCCTCTTTTGACGCCATCTTTGTGGATGAGGCCCAGGACTGCACACCAGCTATCATGAACATAGTTCTGTCTCAGCC ATGTGGGAAAATCTTTGTAGGGGACCCGCACCAGCAGATCTATACCTTCCGGGGTGCGGTCAACGCCCTGTTCACAGTGCCCCACACCCA CGTCTTCTATCTCACGCAGGATGAAACTGAATTCCGAGATAAATTATCTCCAATCAACATTAGTTTGAATTACAGTTTGGACGAATCCAC CTTTAAAGAAGGCCTGGAAGTGAAACCAATATTGAACTACTACAGAGAAAACATTGTTAGTGAACAGGCTCACATTCTGGTGGACTGTGG AGAAGACAATCTGTGTGTTCCTGACTTGAAGCTGTCGGCTAGACCAGATAAGCATCAGGTAATCATTGGAGATGAAAATCACCTTATGCT CATAATAAATGCAAGAAATGAAGGGGAAGGAGCATATGAAGCTGAACTCTTTGTAATGATACCAGAAGAGGCAGATTATGTTGGAATCGA ACGCAACAACAAGGGATTTCGACCACTGAGCTGTGAGTACAAGATGGAAAATGTAACCAGGATGGTGGTGTGTGACCTTGGGAACCCTAT GGTGTCTGGAACAAATTATTCCCTGGGCCTCCGATTTGCAGTTCCACGTCTTGAGAAAACAAACATGAGCATTAACTTCGATCTCCAAAT CAGAAGTTCCAACAAGGACAATCCAGACAGCAATTTTGTGAGCCTGCAAATCAACATCACTGCTGTAGCGCAGGTGGAAATAAGAGGAGT GTCACACCCTCCGCAGATTGTTCTGCCCATTCATAACTGGGAACCAGAAGAGGAGCCCCACAAAGAGGAGGAGGTTGGACCATTGGTGGA ACATATTTATGAGCTGCACAATATTGGACCAAGTACCATCAGTGACACCATCCTGGAGGTGGGCTGGCCTTTCTCTGCCCGGGATGAATT TCTTCTCTATATTTTCCATATTCAAACTCTGGGACCTCTGCAGTGCCAACCAAATCCTAATATCAATCCACAGGATATAAAGCCTGCTGC CTCCCCAGAGGACACCCCTGAGCTCAGCGCCTTTTTGCGAAACTCTACTATTCCTCATCTTGTCAGGAAGAGGGATGTACATGTGGTCGA ATTCCACAGACAGAGCCCTGCAAAAATACTGAATTGTACAAATATCGAGTGTTTACAAATCTCCTGTGCAGTGGGACGACTCGAAGGAGG AGAAAGCGCAGTCCTGAAAGTCAGGTCACGATTATGGGCCCACACCTTCCTCCAGAGAAAAAATGATCCCTATGCTCTTGCATCCCTGGT GTCCTTTGAAGTTAAGAAGATGCCTTATACAGATCAGCCAGCAAAACTCCCAGAAGGAAGCATAGTAATTAAGACATCAGTTATTTGGGC AACTCCGAATGTTTCCTTCTCAATCCCATTATGGGTAATAATACTAGCAATACTTCTTGGATTGTTGGTTCTCGCCATTTTAACCTTAGC TTTATGGAAGTGTGGATTCTTTGACAGAGCCAGACCTCCTCAGGAGGACATGACCGACAGGGAACAGCTGACAAATGACAAGACCCCTGA GGCATGACAAGAAAAAAAAAGAAGACCAAAGACCTCAAACACTGGTCCTGTTCAAAGAAAAAGAAAGAACATGAGGGTTAAAAATCAAAG CTTTCTGATACCTGACAGTGACCCAGGAAATGGAGGGGACCCTGGAAACATCACCTCATCTACACCGCACTTTGGAGAAATTGTCCTGGG TGCCCAGTGAGCCCTGTTGGAAAAGGAAACACCAAAGCTGGAGAAGCCATCAGCAATTGTGGAAGATTTTCTTTTGCTTTAATCGTTCTG TACTTGGCAGACACTTTGAAATGCGTATGGGAACGTAAGTTGCAGTCCAGATCAATCCAGCATAAGTTGCAGAGATGAAATGTCTGAATC ACTATAGAATTTACAAGGTGAACTAAGGTGAAATGACTGATTTACTATAGAACTTAGAACTAAGACCACACCATCCAACACTACTGTATC CAATGGAACATTTGACACCTCCCTATGGAAAAGAAACATTTCTAAGGACATTATGGCTCAGGGAGACAAGCAATATGTTGTTGGTACTGT GAAAGTACTTTTGAAAGGACAAAAATAATCTTGTGAGTGAGGGTGAGAGTTTATTTATTTATTTTCCATGTCTCTAGGTTGAGAATCTGT CATCTAGAGAATTTGGAAATTAAGATTTGGTTAGCTAGTTTTCAAAATCACTCACTCAGTTTCCTCCTAAGAACCACTGTGTGCAGATAA CTCATTTAGCAGAGCTTCTTCAGAATTTAGACAGTGCTAAGGAAAGGAAGATTGGCATTAGGAATCAGTTCTATTTAATACCTTGCTGCC TTCCATCTGAAATTCCTTTCACTCACATTATCCAGGGACTCACATCTGCTTAATTTAGCTTTGCAAGATGTTGCATTTATATTTCCTTGT ATATCTTTCCATTGACTTAGTTAATACATGAATTTCGAGGTACTCTCTACCTTTGGAGTGTTTAAAAGTCATGGTAAAATGTCTAGAGTT CATTAATTAAAAAGCAATTTAACATTATGGGTAAACATTATTTTTAATATCTATAAGAAGCAACACTTCTTATAGATATTTAGCTTGGGA TTAAATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTTGAATATAACTTAGACAAAAACATAAAATTATAC AGGCATGAGCCAAACTGGGAAAACTGATTCCTAAAGATTTTTATTTAAAATTGCTTATTCCAACTTTATTACTTATTTTTACTGCTAATC TTTATAATATGTAACTTTGGAGAATAATCTTTTATTTAAGCTATTTTCCCATCATCTTGAATTTAACCATCACAAATTTTTTATGTTTAA AACTCTTGTAAATAATTCATAATCTTGTAATATTATCATTTTTGAAGTAAAATTGACCAGCCAAATTTATAGGTAGTCTGCACAATTTTG TATCCTTTTTTAATAATGAAAAATTACTATGAAGAAATACTGAACAAATTTTTATGTGCAATATTTTATAGACCTATGTATCTGAAGCAT GTTTACACTGGCGTTTTTTTTTTTAATTAATTTCCTAAATGTTAAGTATGATAGAACAAGCTGACCCAAATCCTTAAGTTTACAAAGCTG TTGGAAAACTTTGTGTCCTGATTTCAACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTATGTCATGCCATA AGCTGGAGAGGAGCCATTTGGCTACAGCTGCGGAACTTCATTGAGGAGCAAATGAAAGGCACATGGACGAGCACGCTGGTGCAGTTCATG TTCTTCCTGCCTGTGAATTGAATACTGTCCTGGTAGCAGTTTCGGGTCGGTCAGGAGCTCAAGGCTGGTTTGTGTGGCTGACTACGGATG AGCACTGAAGTTGCCTCAAAGAATTAAGGGGTGTCCACACCAGCCTCTGGGGGTCTTTGGTGTTAGTCTTCCAGGTAGAGCTGGTTTTAC AAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGATGCCAGACAGCTCTCTCTGACCCCAGGTAATGCCCTGAATCTGGTGATCCTGGC TGATCTGTGACCAATAGAGATTAGCTCCTTGGGATTTGGGGTCCTAAAAGGTCCCTGAAAAAATGCACCCCTTGTCTTTAAGCCAACATT GGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAAAAAGACCCCTGTTGAGATAGTTTATGCAGATACCTGGAAGGAACTAGAGATGCC AGGAGGAAGACTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAGCCAAGATGGCCCTTT CCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGCACGCAG TGGCCCTCTGCCCTTTAGAATATGGAAGCAAAGTCTGGGTGCAGTGACTCACACTTGTAATCCCAACACTTTGGGAGGCCGAGACGGGCA GATCACCTGAGTTCAGGAGTTCAAGACCAGCCTGGCCAACGTGGCAAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGT GGCAGTCTCCTGTAATCCCAGCTACCTAGGAGGCTGAGGCAGAGAGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCTGAGA TCGCGCGACTGCACTCCAGCCTGGGCGACAGAGGGAAACTCTGTCTCAACAAAAAAATAAATAAAATAAAAAATAAAAAAAGAATATGGA AGCAAATGGAGAAAGGGAGGAAACTGAGGTCAGGCAAACCTTCCAGCAATCCGTTCTGCCCAGAGAACATACTGACGACAGAGAACACAC TGAGCGTTATCTGCTTCTAGTTAGAGCATTGCCGATTGCCTTCATAATTCATAATGTGCTGTGCTCCTCTGAGGGTCTATCTGTATTTCT CTTCAAAGAATTCCCTTTTTAAATTCTTGCAGCTGGGTTTTAAGACACAATAATGGGGCAAATTAAGTTTTATAAACTTGGAGATTTTTA TACAGTAAATAAAAAAATAATATGTACTAGTCACCCCTGAAACTGCATTCTTAGAACTCGACTCTTGTTTTATTTAAATACGTGCGTAGA >29765_29765_3_FBXO18-ITGA8_FBXO18_chr10_5960441_ENST00000397269_ITGA8_chr10_15648421_ENST00000378076_length(amino acids)=1175AA_BP=700 MRRFKRKHLTAIDCQHLARSHLAVTQPFGQRWTNRDPNHGLYPKPRTKRGSRGQGSQRCIPEFFLAGKQPCTNDMAKSNSVGQDSCQDSE GDMIFPAESSCALPQEGSAGPGSPGSAPPSRKRSWSSEEESNQATGTSRWDGVSKKAPRHHLSVPCTRPREARQEAEDSTSRLSAESGET DQDAGDVGPDPIPDSYYGLLGTLPCQEALSHICSLPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDPLFIPWKKLYHRYLMNEEQAV SKVDGILSNCGIEKESDLCVLNLIRYTATTKCSPSVDPERVLWSLRDHPLLPEAEACVRQHLPDLYAAAGGVNIWALVAAVVLLSSSVND IQRLLFCLRRPSSTVTMPDVTETLYCIAVLLYAMREKGINISNRIHYNIFYCLYLQENSCTQATKVKEEPSVWPGKKTIQLTHEQQLILN HKMEPLQVVKIMAFAGTGKTSTLVKYAEKWSQSRFLYVTFNKSIAKQAERVFPSNVICKTFHSMAYGHIGRKYQSKKKLNLFKLTPFMVN SVLAEGKGGFIRAKLVCKTLENFFASADEELTIDHVPIWCKNSQGQRVMVEQSEKLNGVLEASRLWDNMRKLGECTEEAHQMTHDGYLKL WQLSKPSLASFDAIFVDEAQDCTPAIMNIVLSQPCGKIFVGDPHQQIYTFRGAVNALFTVPHTHVFYLTQDETEFRDKLSPINISLNYSL DESTFKEGLEVKPILNYYRENIVSEQAHILVDCGEDNLCVPDLKLSARPDKHQVIIGDENHLMLIINARNEGEGAYEAELFVMIPEEADY VGIERNNKGFRPLSCEYKMENVTRMVVCDLGNPMVSGTNYSLGLRFAVPRLEKTNMSINFDLQIRSSNKDNPDSNFVSLQINITAVAQVE IRGVSHPPQIVLPIHNWEPEEEPHKEEEVGPLVEHIYELHNIGPSTISDTILEVGWPFSARDEFLLYIFHIQTLGPLQCQPNPNINPQDI KPAASPEDTPELSAFLRNSTIPHLVRKRDVHVVEFHRQSPAKILNCTNIECLQISCAVGRLEGGESAVLKVRSRLWAHTFLQRKNDPYAL ASLVSFEVKKMPYTDQPAKLPEGSIVIKTSVIWATPNVSFSIPLWVIILAILLGLLVLAILTLALWKCGFFDRARPPQEDMTDREQLTND -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for FBXO18-ITGA8 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for FBXO18-ITGA8 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for FBXO18-ITGA8 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |