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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:GNE-LOH12CR1 (FusionGDB2 ID:33727) |
Fusion Gene Summary for GNE-LOH12CR1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: GNE-LOH12CR1 | Fusion gene ID: 33727 | Hgene | Tgene | Gene symbol | GNE | LOH12CR1 | Gene ID | 10020 | 118426 |
Gene name | glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase | BLOC-1 related complex subunit 5 | |
Synonyms | DMRV|GLCNE|IBM2|NM|Uae1 | LOH12CR1|LOH1CR12 | |
Cytomap | 9p13.3 | 12p13.2 | |
Type of gene | protein-coding | protein-coding | |
Description | bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinaseN-acylmannosamine kinaseUDP-GlcNAc-2-epimerase/ManAc kinaseUDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase | BLOC-1-related complex subunit 5loss of heterozygosity 12 chromosomal region 1 proteinloss of heterozygosity, 12, chromosomal region 1myristoylated lysosomal proteinmyrlysin | |
Modification date | 20200328 | 20200313 | |
UniProtAcc | Q9Y223 | . | |
Ensembl transtripts involved in fusion gene | ENST00000377902, ENST00000447283, ENST00000396594, ENST00000539208, ENST00000539815, ENST00000543356, | ENST00000298571, ENST00000314565, ENST00000542728, | |
Fusion gene scores | * DoF score | 7 X 9 X 6=378 | 7 X 3 X 6=126 |
# samples | 10 | 8 | |
** MAII score | log2(10/378*10)=-1.91838623444635 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(8/126*10)=-0.655351828612554 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: GNE [Title/Abstract] AND LOH12CR1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | GNE(36218179)-LOH12CR1(12588561), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | GNE-LOH12CR1 seems lost the major protein functional domain in Hgene partner, which is a cell metabolism gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across GNE (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across LOH12CR1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | ESCA | TCGA-R6-A6Y0 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
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Fusion Gene ORF analysis for GNE-LOH12CR1 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000377902 | ENST00000298571 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
Frame-shift | ENST00000377902 | ENST00000314565 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
Frame-shift | ENST00000377902 | ENST00000542728 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
Frame-shift | ENST00000447283 | ENST00000298571 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
Frame-shift | ENST00000447283 | ENST00000314565 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
Frame-shift | ENST00000447283 | ENST00000542728 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
In-frame | ENST00000396594 | ENST00000298571 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
In-frame | ENST00000396594 | ENST00000314565 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
In-frame | ENST00000396594 | ENST00000542728 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
In-frame | ENST00000539208 | ENST00000298571 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
In-frame | ENST00000539208 | ENST00000314565 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
In-frame | ENST00000539208 | ENST00000542728 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
In-frame | ENST00000539815 | ENST00000298571 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
In-frame | ENST00000539815 | ENST00000314565 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
In-frame | ENST00000539815 | ENST00000542728 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
In-frame | ENST00000543356 | ENST00000298571 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
In-frame | ENST00000543356 | ENST00000314565 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
In-frame | ENST00000543356 | ENST00000542728 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000396594 | GNE | chr9 | 36218179 | - | ENST00000542728 | LOH12CR1 | chr12 | 12588561 | + | 2534 | 2138 | 64 | 2526 | 820 |
ENST00000396594 | GNE | chr9 | 36218179 | - | ENST00000314565 | LOH12CR1 | chr12 | 12588561 | + | 3657 | 2138 | 64 | 2526 | 820 |
ENST00000396594 | GNE | chr9 | 36218179 | - | ENST00000298571 | LOH12CR1 | chr12 | 12588561 | + | 2595 | 2138 | 64 | 2526 | 820 |
ENST00000539815 | GNE | chr9 | 36218179 | - | ENST00000542728 | LOH12CR1 | chr12 | 12588561 | + | 2370 | 1974 | 41 | 2362 | 773 |
ENST00000539815 | GNE | chr9 | 36218179 | - | ENST00000314565 | LOH12CR1 | chr12 | 12588561 | + | 3493 | 1974 | 41 | 2362 | 773 |
ENST00000539815 | GNE | chr9 | 36218179 | - | ENST00000298571 | LOH12CR1 | chr12 | 12588561 | + | 2431 | 1974 | 41 | 2362 | 773 |
ENST00000543356 | GNE | chr9 | 36218179 | - | ENST00000542728 | LOH12CR1 | chr12 | 12588561 | + | 2314 | 1918 | 0 | 2306 | 768 |
ENST00000543356 | GNE | chr9 | 36218179 | - | ENST00000314565 | LOH12CR1 | chr12 | 12588561 | + | 3437 | 1918 | 0 | 2306 | 768 |
ENST00000543356 | GNE | chr9 | 36218179 | - | ENST00000298571 | LOH12CR1 | chr12 | 12588561 | + | 2375 | 1918 | 0 | 2306 | 768 |
ENST00000539208 | GNE | chr9 | 36218179 | - | ENST00000542728 | LOH12CR1 | chr12 | 12588561 | + | 2137 | 1741 | 138 | 2129 | 663 |
ENST00000539208 | GNE | chr9 | 36218179 | - | ENST00000314565 | LOH12CR1 | chr12 | 12588561 | + | 3260 | 1741 | 138 | 2129 | 663 |
ENST00000539208 | GNE | chr9 | 36218179 | - | ENST00000298571 | LOH12CR1 | chr12 | 12588561 | + | 2198 | 1741 | 138 | 2129 | 663 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000396594 | ENST00000542728 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + | 0.002057577 | 0.9979424 |
ENST00000396594 | ENST00000314565 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + | 0.000990426 | 0.9990095 |
ENST00000396594 | ENST00000298571 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + | 0.002116397 | 0.9978836 |
ENST00000539815 | ENST00000542728 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + | 0.003844384 | 0.9961557 |
ENST00000539815 | ENST00000314565 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + | 0.002190578 | 0.99780947 |
ENST00000539815 | ENST00000298571 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + | 0.003997287 | 0.99600273 |
ENST00000543356 | ENST00000542728 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + | 0.004670664 | 0.9953294 |
ENST00000543356 | ENST00000314565 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + | 0.002926625 | 0.9970734 |
ENST00000543356 | ENST00000298571 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + | 0.004979578 | 0.9950204 |
ENST00000539208 | ENST00000542728 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + | 0.004149196 | 0.9958508 |
ENST00000539208 | ENST00000314565 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + | 0.002122629 | 0.99787736 |
ENST00000539208 | ENST00000298571 | GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + | 0.004719135 | 0.9952808 |
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Fusion Genomic Features for GNE-LOH12CR1 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + | 1.39E-08 | 1 |
GNE | chr9 | 36218179 | - | LOH12CR1 | chr12 | 12588561 | + | 1.39E-08 | 1 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for GNE-LOH12CR1 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr9:36218179/chr12:12588561) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
GNE | . |
FUNCTION: Regulates and initiates biosynthesis of N-acetylneuraminic acid (NeuAc), a precursor of sialic acids. Plays an essential role in early development (By similarity). Required for normal sialylation in hematopoietic cells. Sialylation is implicated in cell adhesion, signal transduction, tumorigenicity and metastatic behavior of malignant cells. {ECO:0000250, ECO:0000269|PubMed:10334995}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | GNE | chr9:36218179 | chr12:12588561 | ENST00000377902 | - | 11 | 12 | 411_420 | 644 | 723.0 | Nucleotide binding | Note=ATP |
Hgene | GNE | chr9:36218179 | chr12:12588561 | ENST00000377902 | - | 11 | 12 | 543_552 | 644 | 723.0 | Nucleotide binding | Note=ATP |
Hgene | GNE | chr9:36218179 | chr12:12588561 | ENST00000396594 | - | 11 | 12 | 411_420 | 675 | 754.0 | Nucleotide binding | Note=ATP |
Hgene | GNE | chr9:36218179 | chr12:12588561 | ENST00000396594 | - | 11 | 12 | 543_552 | 675 | 754.0 | Nucleotide binding | Note=ATP |
Hgene | GNE | chr9:36218179 | chr12:12588561 | ENST00000447283 | - | 10 | 11 | 411_420 | 570 | 649.0 | Nucleotide binding | Note=ATP |
Hgene | GNE | chr9:36218179 | chr12:12588561 | ENST00000447283 | - | 10 | 11 | 543_552 | 570 | 649.0 | Nucleotide binding | Note=ATP |
Hgene | GNE | chr9:36218179 | chr12:12588561 | ENST00000539208 | - | 9 | 10 | 411_420 | 534 | 613.0 | Nucleotide binding | Note=ATP |
Hgene | GNE | chr9:36218179 | chr12:12588561 | ENST00000539815 | - | 10 | 12 | 411_420 | 644 | 1065.0 | Nucleotide binding | Note=ATP |
Hgene | GNE | chr9:36218179 | chr12:12588561 | ENST00000539815 | - | 10 | 12 | 543_552 | 644 | 1065.0 | Nucleotide binding | Note=ATP |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | GNE | chr9:36218179 | chr12:12588561 | ENST00000539208 | - | 9 | 10 | 543_552 | 534 | 613.0 | Nucleotide binding | Note=ATP |
Hgene | GNE | chr9:36218179 | chr12:12588561 | ENST00000377902 | - | 11 | 12 | 406_722 | 644 | 723.0 | Region | Note=N-acetylmannosamine kinase |
Hgene | GNE | chr9:36218179 | chr12:12588561 | ENST00000396594 | - | 11 | 12 | 406_722 | 675 | 754.0 | Region | Note=N-acetylmannosamine kinase |
Hgene | GNE | chr9:36218179 | chr12:12588561 | ENST00000447283 | - | 10 | 11 | 406_722 | 570 | 649.0 | Region | Note=N-acetylmannosamine kinase |
Hgene | GNE | chr9:36218179 | chr12:12588561 | ENST00000539208 | - | 9 | 10 | 406_722 | 534 | 613.0 | Region | Note=N-acetylmannosamine kinase |
Hgene | GNE | chr9:36218179 | chr12:12588561 | ENST00000539815 | - | 10 | 12 | 406_722 | 644 | 1065.0 | Region | Note=N-acetylmannosamine kinase |
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Fusion Gene Sequence for GNE-LOH12CR1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>33727_33727_1_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000396594_LOH12CR1_chr12_12588561_ENST00000298571_length(transcript)=2595nt_BP=2138nt AGTCTGGAATTCAGATGCCTATTGGTGACTGCTCCGTGGCAGCTAAACCAAGAAAACAGCTGCTCTGCTCATTATTTCAAACCACACTAG GGTACAGAGCTCGTGCTTCGGGATGGAAACCTATGGTTATCTGCAGAGGGAGTCATGCTTTCAAGGACCTCATGAACTCTATTTTAAGAA CCTCTCAAAACGAAACAAGCAAATCATGGAGAAGAATGGAAATAACCGAAAGCTGCGGGTTTGTGTTGCTACTTGTAACCGTGCAGATTA TTCTAAACTTGCCCCGATCATGTTTGGCATTAAAACCGAACCTGAGTTCTTTGAACTTGATGTTGTGGTACTTGGCTCTCACCTGATAGA TGACTATGGAAATACATATCGAATGATTGAACAAGATGACTTTGACATTAACACCAGGCTACACACAATTGTGAGGGGAGAAGATGAGGC AGCCATGGTGGAGTCAGTAGGCCTGGCCCTAGTGAAGCTGCCAGATGTCCTTAATCGCCTGAAGCCTGATATCATGATTGTTCATGGAGA CAGGTTTGATGCCCTGGCTCTGGCCACATCTGCTGCCTTGATGAACATCCGAATCCTTCACATTGAAGGTGGGGAAGTCAGTGGGACCAT TGATGACTCTATCAGACATGCCATAACAAAACTGGCTCATTATCATGTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATATCCATGTG TGAGGACCATGATCGCATCCTTTTGGCAGGCTGCCCTTCCTATGACAAACTTCTCTCAGCCAAGAACAAAGACTACATGAGCATCATTCG CATGTGGCTAGGTGATGATGTAAAATCTAAAGATTACATTGTTGCACTACAGCACCCTGTGACCACTGACATTAAGCATTCCATAAAAAT GTTTGAATTAACATTGGATGCACTTATCTCATTTAACAAGCGGACCCTAGTCCTGTTTCCAAATATTGACGCAGGGAGCAAAGAGATGGT TCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCAACTTTCGTGCAGTTAAACACGTCCCATTTGACCAGTTTATACAGTTGGTTGC CCATGCTGGCTGTATGATTGGGAACAGCAGCTGTGGGGTTCGAGAAGTTGGAGCTTTTGGAACACCTGTGATCAACCTGGGAACACGTCA GATTGGAAGAGAAACAGGGGAGAATGTTCTTCATGTCCGGGATGCTGACACCCAAGACAAAATATTGCAAGCACTGCACCTTCAGTTTGG TAAACAGTACCCTTGTTCAAAGATATATGGGGATGGAAATGCTGTTCCAAGGATTTTGAAGTTTCTCAAATCTATCGATCTTCAAGAGCC ACTGCAAAAGAAATTCTGCTTTCCTCCTGTGAAGGAGAATATCTCTCAAGATATTGACCATATTCTTGAAACTCTAAGTGCCTTGGCCGT TGATCTTGGCGGGACGAACCTCCGAGTTGCAATAGTCAGCATGAAGGGTGAAATAGTTAAGAAGTATACTCAGTTCAATCCTAAAACCTA TGAAGAGAGGATTAATTTAATCCTACAGATGTGTGTGGAAGCTGCAGCAGAAGCTGTAAAACTGAACTGCAGAATTTTGGGAGTAGGCAT TTCCACAGGTGGCCGTGTAAATCCTCGGGAAGGAATTGTGCTGCATTCAACCAAACTGATCCAAGAGTGGAACTCTGTGGACCTTAGGAC CCCCCTTTCTGACACTTTGCATCTCCCTGTGTGGGTAGACAATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGGAAA GGGACTGGAAAACTTTGTTACACTTATCACAGGCACAGGAATCGGTGGTGGAATTATCCATCAGCATGAATTGATCCACGGAAGCTCCTT CTGTGCTGCAGAACTGGGCCACCTTGTTGTGTCTCTGGATGGGCCTGATTGTTCCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCTC TGGAATGGCCTTGCAGAGGGAGGCAAAAAAGCTCCATGATGAGGACCTGCTCTTGGTGGAAGGGATGTCAGTGCCAAAAGATGAGGCTGT GGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAACAGGGCTATTGAGTGGCCAGACTTC CCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAGCAGGTGTTGCAGCTCTGCCTCCGATATCAAGATCACCTGCATCAGTGTGCAGA GGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGAATCAAAGAGATGGATCTGTCTGTAGAAACTCTGTTCAGCTTCATGCAGGAGCG CCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAGAAAGTGAACGAGATGTCCGCCATCCTCCGCCGCATACAGATGGGCATCGACCA GACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTGCCCGAGGGCGAGCGGCTGGAGCCCTTCAGCATGAAGCCCGACCGCGAGCTCAG >33727_33727_1_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000396594_LOH12CR1_chr12_12588561_ENST00000298571_length(amino acids)=820AA_BP=691 MLIISNHTRVQSSCFGMETYGYLQRESCFQGPHELYFKNLSKRNKQIMEKNGNNRKLRVCVATCNRADYSKLAPIMFGIKTEPEFFELDV VVLGSHLIDDYGNTYRMIEQDDFDINTRLHTIVRGEDEAAMVESVGLALVKLPDVLNRLKPDIMIVHGDRFDALALATSAALMNIRILHI EGGEVSGTIDDSIRHAITKLAHYHVCCTRSAEQHLISMCEDHDRILLAGCPSYDKLLSAKNKDYMSIIRMWLGDDVKSKDYIVALQHPVT TDIKHSIKMFELTLDALISFNKRTLVLFPNIDAGSKEMVRVMRKKGIEHHPNFRAVKHVPFDQFIQLVAHAGCMIGNSSCGVREVGAFGT PVINLGTRQIGRETGENVLHVRDADTQDKILQALHLQFGKQYPCSKIYGDGNAVPRILKFLKSIDLQEPLQKKFCFPPVKENISQDIDHI LETLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQ EWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGS HGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGNAKAQSILRTGLLSGQTSPTNAKLEKLDSQQVLQLCLRY QDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYAEQIQKVNEMSAILRRIQMGIDQTVPLLDRLNSMLPEGERLEPF -------------------------------------------------------------- >33727_33727_2_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000396594_LOH12CR1_chr12_12588561_ENST00000314565_length(transcript)=3657nt_BP=2138nt AGTCTGGAATTCAGATGCCTATTGGTGACTGCTCCGTGGCAGCTAAACCAAGAAAACAGCTGCTCTGCTCATTATTTCAAACCACACTAG GGTACAGAGCTCGTGCTTCGGGATGGAAACCTATGGTTATCTGCAGAGGGAGTCATGCTTTCAAGGACCTCATGAACTCTATTTTAAGAA CCTCTCAAAACGAAACAAGCAAATCATGGAGAAGAATGGAAATAACCGAAAGCTGCGGGTTTGTGTTGCTACTTGTAACCGTGCAGATTA TTCTAAACTTGCCCCGATCATGTTTGGCATTAAAACCGAACCTGAGTTCTTTGAACTTGATGTTGTGGTACTTGGCTCTCACCTGATAGA TGACTATGGAAATACATATCGAATGATTGAACAAGATGACTTTGACATTAACACCAGGCTACACACAATTGTGAGGGGAGAAGATGAGGC AGCCATGGTGGAGTCAGTAGGCCTGGCCCTAGTGAAGCTGCCAGATGTCCTTAATCGCCTGAAGCCTGATATCATGATTGTTCATGGAGA CAGGTTTGATGCCCTGGCTCTGGCCACATCTGCTGCCTTGATGAACATCCGAATCCTTCACATTGAAGGTGGGGAAGTCAGTGGGACCAT TGATGACTCTATCAGACATGCCATAACAAAACTGGCTCATTATCATGTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATATCCATGTG TGAGGACCATGATCGCATCCTTTTGGCAGGCTGCCCTTCCTATGACAAACTTCTCTCAGCCAAGAACAAAGACTACATGAGCATCATTCG CATGTGGCTAGGTGATGATGTAAAATCTAAAGATTACATTGTTGCACTACAGCACCCTGTGACCACTGACATTAAGCATTCCATAAAAAT GTTTGAATTAACATTGGATGCACTTATCTCATTTAACAAGCGGACCCTAGTCCTGTTTCCAAATATTGACGCAGGGAGCAAAGAGATGGT TCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCAACTTTCGTGCAGTTAAACACGTCCCATTTGACCAGTTTATACAGTTGGTTGC CCATGCTGGCTGTATGATTGGGAACAGCAGCTGTGGGGTTCGAGAAGTTGGAGCTTTTGGAACACCTGTGATCAACCTGGGAACACGTCA GATTGGAAGAGAAACAGGGGAGAATGTTCTTCATGTCCGGGATGCTGACACCCAAGACAAAATATTGCAAGCACTGCACCTTCAGTTTGG TAAACAGTACCCTTGTTCAAAGATATATGGGGATGGAAATGCTGTTCCAAGGATTTTGAAGTTTCTCAAATCTATCGATCTTCAAGAGCC ACTGCAAAAGAAATTCTGCTTTCCTCCTGTGAAGGAGAATATCTCTCAAGATATTGACCATATTCTTGAAACTCTAAGTGCCTTGGCCGT TGATCTTGGCGGGACGAACCTCCGAGTTGCAATAGTCAGCATGAAGGGTGAAATAGTTAAGAAGTATACTCAGTTCAATCCTAAAACCTA TGAAGAGAGGATTAATTTAATCCTACAGATGTGTGTGGAAGCTGCAGCAGAAGCTGTAAAACTGAACTGCAGAATTTTGGGAGTAGGCAT TTCCACAGGTGGCCGTGTAAATCCTCGGGAAGGAATTGTGCTGCATTCAACCAAACTGATCCAAGAGTGGAACTCTGTGGACCTTAGGAC CCCCCTTTCTGACACTTTGCATCTCCCTGTGTGGGTAGACAATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGGAAA GGGACTGGAAAACTTTGTTACACTTATCACAGGCACAGGAATCGGTGGTGGAATTATCCATCAGCATGAATTGATCCACGGAAGCTCCTT CTGTGCTGCAGAACTGGGCCACCTTGTTGTGTCTCTGGATGGGCCTGATTGTTCCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCTC TGGAATGGCCTTGCAGAGGGAGGCAAAAAAGCTCCATGATGAGGACCTGCTCTTGGTGGAAGGGATGTCAGTGCCAAAAGATGAGGCTGT GGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAACAGGGCTATTGAGTGGCCAGACTTC CCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAGCAGGTGTTGCAGCTCTGCCTCCGATATCAAGATCACCTGCATCAGTGTGCAGA GGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGAATCAAAGAGATGGATCTGTCTGTAGAAACTCTGTTCAGCTTCATGCAGGAGCG CCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAGAAAGTGAACGAGATGTCCGCCATCCTCCGCCGCATACAGATGGGCATCGACCA GACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTGCCCGAGGGCGAGCGGCTGGAGCCCTTCAGCATGAAGCCCGACCGCGAGCTCAG GCTGTAGCTGCTGCCCGGCCTGCCTGGGGCTGGGAGCCCCAGACACCGACACCCTGAGGACGTGTGGAGCTAAGGTCATATCATCTGACC AGGTCTGGAGGCTGGCGGGAGGCTCCCTGAAAGTGGGTGCGAAGGAGTCCGGCTGGCATGAAAATCTGACTTTGCCCAGCTCTTTTCCTT GATGCAGTTTCCCGGTGTGGAAGGAACCTAACCAGTTCTCGGTGATAACTGAAGCTGGAACGTGTGAATTATTAGGAATTCTTTGAAGAA CTCTGCATTGAGAATTATTTTTATTTAGTTTTTTTTTTTTTTTAATTGAGAGTATATAGTCCAGTCCAGGTACCGGAATAAAAATATGGA GACAAGGGGAAAATATTTTACGAAGCTCTGTGTTCTCAACGCCCTCATGAACTTTTCAGTAGGCTGTCTGGTTTATGTGTGGTCAACTTG AAAAACTAATTGAATCTAGGTCTCTGTATTGTTCCTGTTTCTACCCTGACTGTTTCCGTCACACCAAGCCCTTATCTGGGGCGCGTCTTC CTGCCCAGGTGGAACACTGGCATTTTGTTGACTGTCAGGTTAGGTGTCCCTTAGTCGTCATCAGAAGCTGAAGCCTTCCTTTCCACACCC TCATCAGATTCATCTCCACTGATAACCGGTTTCCTTGATGCAGACATAGTTTAGCTTTCTTTGACTGCAGAGATGTCTCATTCCACAGAC ATTTCTTGAACCCATTTGATGTGTCCAATATTGTGCCAGGGATACAAATATGGCCGTATAGCCTCAGGCCTTCATTTCTGAAAAGAAAAA AGCTCAAAAAGCTGCTGAATTTCTCTGGGAGTTTAGGAAAGGAAGTTATTTGAGTAACAACAAAAGTGCTTAGTGTCGTACTTTACACAT CATAGGTGTTCTAATGGAAGCAAGGACTGGAGAAGCAAAGAGTGGAATGTGAGGAGCAGACCTAGGCAGACACCTTGAGACTAAAAGTCA GAGCTGAAGGGAGTCGCTGGGGCCAGGACGGCATGCAGGCCTGTACCCTGTTCCCTAAGTTCCTGCAAGCGTCGGGAGGTGTGTTTTCAG >33727_33727_2_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000396594_LOH12CR1_chr12_12588561_ENST00000314565_length(amino acids)=820AA_BP=691 MLIISNHTRVQSSCFGMETYGYLQRESCFQGPHELYFKNLSKRNKQIMEKNGNNRKLRVCVATCNRADYSKLAPIMFGIKTEPEFFELDV VVLGSHLIDDYGNTYRMIEQDDFDINTRLHTIVRGEDEAAMVESVGLALVKLPDVLNRLKPDIMIVHGDRFDALALATSAALMNIRILHI EGGEVSGTIDDSIRHAITKLAHYHVCCTRSAEQHLISMCEDHDRILLAGCPSYDKLLSAKNKDYMSIIRMWLGDDVKSKDYIVALQHPVT TDIKHSIKMFELTLDALISFNKRTLVLFPNIDAGSKEMVRVMRKKGIEHHPNFRAVKHVPFDQFIQLVAHAGCMIGNSSCGVREVGAFGT PVINLGTRQIGRETGENVLHVRDADTQDKILQALHLQFGKQYPCSKIYGDGNAVPRILKFLKSIDLQEPLQKKFCFPPVKENISQDIDHI LETLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQ EWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGS HGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGNAKAQSILRTGLLSGQTSPTNAKLEKLDSQQVLQLCLRY QDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYAEQIQKVNEMSAILRRIQMGIDQTVPLLDRLNSMLPEGERLEPF -------------------------------------------------------------- >33727_33727_3_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000396594_LOH12CR1_chr12_12588561_ENST00000542728_length(transcript)=2534nt_BP=2138nt AGTCTGGAATTCAGATGCCTATTGGTGACTGCTCCGTGGCAGCTAAACCAAGAAAACAGCTGCTCTGCTCATTATTTCAAACCACACTAG GGTACAGAGCTCGTGCTTCGGGATGGAAACCTATGGTTATCTGCAGAGGGAGTCATGCTTTCAAGGACCTCATGAACTCTATTTTAAGAA CCTCTCAAAACGAAACAAGCAAATCATGGAGAAGAATGGAAATAACCGAAAGCTGCGGGTTTGTGTTGCTACTTGTAACCGTGCAGATTA TTCTAAACTTGCCCCGATCATGTTTGGCATTAAAACCGAACCTGAGTTCTTTGAACTTGATGTTGTGGTACTTGGCTCTCACCTGATAGA TGACTATGGAAATACATATCGAATGATTGAACAAGATGACTTTGACATTAACACCAGGCTACACACAATTGTGAGGGGAGAAGATGAGGC AGCCATGGTGGAGTCAGTAGGCCTGGCCCTAGTGAAGCTGCCAGATGTCCTTAATCGCCTGAAGCCTGATATCATGATTGTTCATGGAGA CAGGTTTGATGCCCTGGCTCTGGCCACATCTGCTGCCTTGATGAACATCCGAATCCTTCACATTGAAGGTGGGGAAGTCAGTGGGACCAT TGATGACTCTATCAGACATGCCATAACAAAACTGGCTCATTATCATGTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATATCCATGTG TGAGGACCATGATCGCATCCTTTTGGCAGGCTGCCCTTCCTATGACAAACTTCTCTCAGCCAAGAACAAAGACTACATGAGCATCATTCG CATGTGGCTAGGTGATGATGTAAAATCTAAAGATTACATTGTTGCACTACAGCACCCTGTGACCACTGACATTAAGCATTCCATAAAAAT GTTTGAATTAACATTGGATGCACTTATCTCATTTAACAAGCGGACCCTAGTCCTGTTTCCAAATATTGACGCAGGGAGCAAAGAGATGGT TCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCAACTTTCGTGCAGTTAAACACGTCCCATTTGACCAGTTTATACAGTTGGTTGC CCATGCTGGCTGTATGATTGGGAACAGCAGCTGTGGGGTTCGAGAAGTTGGAGCTTTTGGAACACCTGTGATCAACCTGGGAACACGTCA GATTGGAAGAGAAACAGGGGAGAATGTTCTTCATGTCCGGGATGCTGACACCCAAGACAAAATATTGCAAGCACTGCACCTTCAGTTTGG TAAACAGTACCCTTGTTCAAAGATATATGGGGATGGAAATGCTGTTCCAAGGATTTTGAAGTTTCTCAAATCTATCGATCTTCAAGAGCC ACTGCAAAAGAAATTCTGCTTTCCTCCTGTGAAGGAGAATATCTCTCAAGATATTGACCATATTCTTGAAACTCTAAGTGCCTTGGCCGT TGATCTTGGCGGGACGAACCTCCGAGTTGCAATAGTCAGCATGAAGGGTGAAATAGTTAAGAAGTATACTCAGTTCAATCCTAAAACCTA TGAAGAGAGGATTAATTTAATCCTACAGATGTGTGTGGAAGCTGCAGCAGAAGCTGTAAAACTGAACTGCAGAATTTTGGGAGTAGGCAT TTCCACAGGTGGCCGTGTAAATCCTCGGGAAGGAATTGTGCTGCATTCAACCAAACTGATCCAAGAGTGGAACTCTGTGGACCTTAGGAC CCCCCTTTCTGACACTTTGCATCTCCCTGTGTGGGTAGACAATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGGAAA GGGACTGGAAAACTTTGTTACACTTATCACAGGCACAGGAATCGGTGGTGGAATTATCCATCAGCATGAATTGATCCACGGAAGCTCCTT CTGTGCTGCAGAACTGGGCCACCTTGTTGTGTCTCTGGATGGGCCTGATTGTTCCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCTC TGGAATGGCCTTGCAGAGGGAGGCAAAAAAGCTCCATGATGAGGACCTGCTCTTGGTGGAAGGGATGTCAGTGCCAAAAGATGAGGCTGT GGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAACAGGGCTATTGAGTGGCCAGACTTC CCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAGCAGGTGTTGCAGCTCTGCCTCCGATATCAAGATCACCTGCATCAGTGTGCAGA GGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGAATCAAAGAGATGGATCTGTCTGTAGAAACTCTGTTCAGCTTCATGCAGGAGCG CCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAGAAAGTGAACGAGATGTCCGCCATCCTCCGCCGCATACAGATGGGCATCGACCA GACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTGCCCGAGGGCGAGCGGCTGGAGCCCTTCAGCATGAAGCCCGACCGCGAGCTCAG >33727_33727_3_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000396594_LOH12CR1_chr12_12588561_ENST00000542728_length(amino acids)=820AA_BP=691 MLIISNHTRVQSSCFGMETYGYLQRESCFQGPHELYFKNLSKRNKQIMEKNGNNRKLRVCVATCNRADYSKLAPIMFGIKTEPEFFELDV VVLGSHLIDDYGNTYRMIEQDDFDINTRLHTIVRGEDEAAMVESVGLALVKLPDVLNRLKPDIMIVHGDRFDALALATSAALMNIRILHI EGGEVSGTIDDSIRHAITKLAHYHVCCTRSAEQHLISMCEDHDRILLAGCPSYDKLLSAKNKDYMSIIRMWLGDDVKSKDYIVALQHPVT TDIKHSIKMFELTLDALISFNKRTLVLFPNIDAGSKEMVRVMRKKGIEHHPNFRAVKHVPFDQFIQLVAHAGCMIGNSSCGVREVGAFGT PVINLGTRQIGRETGENVLHVRDADTQDKILQALHLQFGKQYPCSKIYGDGNAVPRILKFLKSIDLQEPLQKKFCFPPVKENISQDIDHI LETLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQ EWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGS HGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGNAKAQSILRTGLLSGQTSPTNAKLEKLDSQQVLQLCLRY QDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYAEQIQKVNEMSAILRRIQMGIDQTVPLLDRLNSMLPEGERLEPF -------------------------------------------------------------- >33727_33727_4_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000539208_LOH12CR1_chr12_12588561_ENST00000298571_length(transcript)=2198nt_BP=1741nt TACCCGCGCGCCCGAGCGCGGAAACCGAGGGGCAGGCTCGCGCTCTGCCTGCTTCGTGGCGCTTGGTTCGTCCCTCGCCCGAGGAGCGCG GTGGCGGCGTGGGAGGGAGCCTCTGACGGCGTCTGAAATACATATCGAATGATTGAACAAGATGACTTTGACATTAACACCAGGCTACAC ACAATTGTGAGGGGAGAAGATGAGGCAGCCATGGTGGAGTCAGTAGGCCTGGCCCTAGTGAAGCTGCCAGATGTCCTTAATCGCCTGAAG CCTGATATCATGATTGTTCATGGAGACAGGTTTGATGCCCTGGCTCTGGCCACATCTGCTGCCTTGATGAACATCCGAATCCTTCACATT GAAGGTGGGGAAGTCAGTGGGACCATTGATGACTCTATCAGACATGCCATAACAAAACTGGCTCATTATCATGTGTGCTGCACCCGCAGT GCAGAGCAGCACCTGATATCCATGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCTGCCCTTCCTATGACAAACTTCTCTCAGCCAAG AACAAAGACTACATGAGCATCATTCGCATGTGGCTAGGGAGCAAAGAGATGGTTCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCC AACTTTCGTGCAGTTAAACACGTCCCATTTGACCAGTTTATACAGTTGGTTGCCCATGCTGGCTGTATGATTGGGAACAGCAGCTGTGGG GTTCGAGAAGTTGGAGCTTTTGGAACACCTGTGATCAACCTGGGAACACGTCAGATTGGAAGAGAAACAGGGGAGAATGTTCTTCATGTC CGGGATGCTGACACCCAAGACAAAATATTGCAAGCACTGCACCTTCAGTTTGGTAAACAGTACCCTTGTTCAAAGATATATGGGGATGGA AATGCTGTTCCAAGGATTTTGAAGTTTCTCAAATCTATCGATCTTCAAGAGCCACTGCAAAAGAAATTCTGCTTTCCTCCTGTGAAGGAG AATATCTCTCAAGATATTGACCATATTCTTGAAACTCTAAGTGCCTTGGCCGTTGATCTTGGCGGGACGAACCTCCGAGTTGCAATAGTC AGCATGAAGGGTGAAATAGTTAAGAAGTATACTCAGTTCAATCCTAAAACCTATGAAGAGAGGATTAATTTAATCCTACAGATGTGTGTG GAAGCTGCAGCAGAAGCTGTAAAACTGAACTGCAGAATTTTGGGAGTAGGCATTTCCACAGGTGGCCGTGTAAATCCTCGGGAAGGAATT GTGCTGCATTCAACCAAACTGATCCAAGAGTGGAACTCTGTGGACCTTAGGACCCCCCTTTCTGACACTTTGCATCTCCCTGTGTGGGTA GACAATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGAAAACTTTGTTACACTTATCACAGGCACA GGAATCGGTGGTGGAATTATCCATCAGCATGAATTGATCCACGGAAGCTCCTTCTGTGCTGCAGAACTGGGCCACCTTGTTGTGTCTCTG GATGGGCCTGATTGTTCCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCTCTGGAATGGCCTTGCAGAGGGAGGCAAAAAAGCTCCAT GATGAGGACCTGCTCTTGGTGGAAGGGATGTCAGTGCCAAAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGC AATGCGAAGGCCCAGAGCATCCTAAGAACAGGGCTATTGAGTGGCCAGACTTCCCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAG CAGGTGTTGCAGCTCTGCCTCCGATATCAAGATCACCTGCATCAGTGTGCAGAGGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGA ATCAAAGAGATGGATCTGTCTGTAGAAACTCTGTTCAGCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAG AAAGTGAACGAGATGTCCGCCATCCTCCGCCGCATACAGATGGGCATCGACCAGACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTG CCCGAGGGCGAGCGGCTGGAGCCCTTCAGCATGAAGCCCGACCGCGAGCTCAGGCTGTAGCTGCTGCCCGGCCTGCCTGGGGCTGGGAGC >33727_33727_4_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000539208_LOH12CR1_chr12_12588561_ENST00000298571_length(amino acids)=663AA_BP=534 MIEQDDFDINTRLHTIVRGEDEAAMVESVGLALVKLPDVLNRLKPDIMIVHGDRFDALALATSAALMNIRILHIEGGEVSGTIDDSIRHA ITKLAHYHVCCTRSAEQHLISMCEDHDRILLAGCPSYDKLLSAKNKDYMSIIRMWLGSKEMVRVMRKKGIEHHPNFRAVKHVPFDQFIQL VAHAGCMIGNSSCGVREVGAFGTPVINLGTRQIGRETGENVLHVRDADTQDKILQALHLQFGKQYPCSKIYGDGNAVPRILKFLKSIDLQ EPLQKKFCFPPVKENISQDIDHILETLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGV GISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGS SFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGNAKAQSILRTGLLSGQ TSPTNAKLEKLDSQQVLQLCLRYQDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYAEQIQKVNEMSAILRRIQMGI -------------------------------------------------------------- >33727_33727_5_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000539208_LOH12CR1_chr12_12588561_ENST00000314565_length(transcript)=3260nt_BP=1741nt TACCCGCGCGCCCGAGCGCGGAAACCGAGGGGCAGGCTCGCGCTCTGCCTGCTTCGTGGCGCTTGGTTCGTCCCTCGCCCGAGGAGCGCG GTGGCGGCGTGGGAGGGAGCCTCTGACGGCGTCTGAAATACATATCGAATGATTGAACAAGATGACTTTGACATTAACACCAGGCTACAC ACAATTGTGAGGGGAGAAGATGAGGCAGCCATGGTGGAGTCAGTAGGCCTGGCCCTAGTGAAGCTGCCAGATGTCCTTAATCGCCTGAAG CCTGATATCATGATTGTTCATGGAGACAGGTTTGATGCCCTGGCTCTGGCCACATCTGCTGCCTTGATGAACATCCGAATCCTTCACATT GAAGGTGGGGAAGTCAGTGGGACCATTGATGACTCTATCAGACATGCCATAACAAAACTGGCTCATTATCATGTGTGCTGCACCCGCAGT GCAGAGCAGCACCTGATATCCATGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCTGCCCTTCCTATGACAAACTTCTCTCAGCCAAG AACAAAGACTACATGAGCATCATTCGCATGTGGCTAGGGAGCAAAGAGATGGTTCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCC AACTTTCGTGCAGTTAAACACGTCCCATTTGACCAGTTTATACAGTTGGTTGCCCATGCTGGCTGTATGATTGGGAACAGCAGCTGTGGG GTTCGAGAAGTTGGAGCTTTTGGAACACCTGTGATCAACCTGGGAACACGTCAGATTGGAAGAGAAACAGGGGAGAATGTTCTTCATGTC CGGGATGCTGACACCCAAGACAAAATATTGCAAGCACTGCACCTTCAGTTTGGTAAACAGTACCCTTGTTCAAAGATATATGGGGATGGA AATGCTGTTCCAAGGATTTTGAAGTTTCTCAAATCTATCGATCTTCAAGAGCCACTGCAAAAGAAATTCTGCTTTCCTCCTGTGAAGGAG AATATCTCTCAAGATATTGACCATATTCTTGAAACTCTAAGTGCCTTGGCCGTTGATCTTGGCGGGACGAACCTCCGAGTTGCAATAGTC AGCATGAAGGGTGAAATAGTTAAGAAGTATACTCAGTTCAATCCTAAAACCTATGAAGAGAGGATTAATTTAATCCTACAGATGTGTGTG GAAGCTGCAGCAGAAGCTGTAAAACTGAACTGCAGAATTTTGGGAGTAGGCATTTCCACAGGTGGCCGTGTAAATCCTCGGGAAGGAATT GTGCTGCATTCAACCAAACTGATCCAAGAGTGGAACTCTGTGGACCTTAGGACCCCCCTTTCTGACACTTTGCATCTCCCTGTGTGGGTA GACAATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGAAAACTTTGTTACACTTATCACAGGCACA GGAATCGGTGGTGGAATTATCCATCAGCATGAATTGATCCACGGAAGCTCCTTCTGTGCTGCAGAACTGGGCCACCTTGTTGTGTCTCTG GATGGGCCTGATTGTTCCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCTCTGGAATGGCCTTGCAGAGGGAGGCAAAAAAGCTCCAT GATGAGGACCTGCTCTTGGTGGAAGGGATGTCAGTGCCAAAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGC AATGCGAAGGCCCAGAGCATCCTAAGAACAGGGCTATTGAGTGGCCAGACTTCCCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAG CAGGTGTTGCAGCTCTGCCTCCGATATCAAGATCACCTGCATCAGTGTGCAGAGGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGA ATCAAAGAGATGGATCTGTCTGTAGAAACTCTGTTCAGCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAG AAAGTGAACGAGATGTCCGCCATCCTCCGCCGCATACAGATGGGCATCGACCAGACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTG CCCGAGGGCGAGCGGCTGGAGCCCTTCAGCATGAAGCCCGACCGCGAGCTCAGGCTGTAGCTGCTGCCCGGCCTGCCTGGGGCTGGGAGC CCCAGACACCGACACCCTGAGGACGTGTGGAGCTAAGGTCATATCATCTGACCAGGTCTGGAGGCTGGCGGGAGGCTCCCTGAAAGTGGG TGCGAAGGAGTCCGGCTGGCATGAAAATCTGACTTTGCCCAGCTCTTTTCCTTGATGCAGTTTCCCGGTGTGGAAGGAACCTAACCAGTT CTCGGTGATAACTGAAGCTGGAACGTGTGAATTATTAGGAATTCTTTGAAGAACTCTGCATTGAGAATTATTTTTATTTAGTTTTTTTTT TTTTTTAATTGAGAGTATATAGTCCAGTCCAGGTACCGGAATAAAAATATGGAGACAAGGGGAAAATATTTTACGAAGCTCTGTGTTCTC AACGCCCTCATGAACTTTTCAGTAGGCTGTCTGGTTTATGTGTGGTCAACTTGAAAAACTAATTGAATCTAGGTCTCTGTATTGTTCCTG TTTCTACCCTGACTGTTTCCGTCACACCAAGCCCTTATCTGGGGCGCGTCTTCCTGCCCAGGTGGAACACTGGCATTTTGTTGACTGTCA GGTTAGGTGTCCCTTAGTCGTCATCAGAAGCTGAAGCCTTCCTTTCCACACCCTCATCAGATTCATCTCCACTGATAACCGGTTTCCTTG ATGCAGACATAGTTTAGCTTTCTTTGACTGCAGAGATGTCTCATTCCACAGACATTTCTTGAACCCATTTGATGTGTCCAATATTGTGCC AGGGATACAAATATGGCCGTATAGCCTCAGGCCTTCATTTCTGAAAAGAAAAAAGCTCAAAAAGCTGCTGAATTTCTCTGGGAGTTTAGG AAAGGAAGTTATTTGAGTAACAACAAAAGTGCTTAGTGTCGTACTTTACACATCATAGGTGTTCTAATGGAAGCAAGGACTGGAGAAGCA AAGAGTGGAATGTGAGGAGCAGACCTAGGCAGACACCTTGAGACTAAAAGTCAGAGCTGAAGGGAGTCGCTGGGGCCAGGACGGCATGCA GGCCTGTACCCTGTTCCCTAAGTTCCTGCAAGCGTCGGGAGGTGTGTTTTCAGATACCAGAAAGAGCCTTCAGTAGATTCACAAGATTAA >33727_33727_5_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000539208_LOH12CR1_chr12_12588561_ENST00000314565_length(amino acids)=663AA_BP=534 MIEQDDFDINTRLHTIVRGEDEAAMVESVGLALVKLPDVLNRLKPDIMIVHGDRFDALALATSAALMNIRILHIEGGEVSGTIDDSIRHA ITKLAHYHVCCTRSAEQHLISMCEDHDRILLAGCPSYDKLLSAKNKDYMSIIRMWLGSKEMVRVMRKKGIEHHPNFRAVKHVPFDQFIQL VAHAGCMIGNSSCGVREVGAFGTPVINLGTRQIGRETGENVLHVRDADTQDKILQALHLQFGKQYPCSKIYGDGNAVPRILKFLKSIDLQ EPLQKKFCFPPVKENISQDIDHILETLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGV GISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGS SFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGNAKAQSILRTGLLSGQ TSPTNAKLEKLDSQQVLQLCLRYQDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYAEQIQKVNEMSAILRRIQMGI -------------------------------------------------------------- >33727_33727_6_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000539208_LOH12CR1_chr12_12588561_ENST00000542728_length(transcript)=2137nt_BP=1741nt TACCCGCGCGCCCGAGCGCGGAAACCGAGGGGCAGGCTCGCGCTCTGCCTGCTTCGTGGCGCTTGGTTCGTCCCTCGCCCGAGGAGCGCG GTGGCGGCGTGGGAGGGAGCCTCTGACGGCGTCTGAAATACATATCGAATGATTGAACAAGATGACTTTGACATTAACACCAGGCTACAC ACAATTGTGAGGGGAGAAGATGAGGCAGCCATGGTGGAGTCAGTAGGCCTGGCCCTAGTGAAGCTGCCAGATGTCCTTAATCGCCTGAAG CCTGATATCATGATTGTTCATGGAGACAGGTTTGATGCCCTGGCTCTGGCCACATCTGCTGCCTTGATGAACATCCGAATCCTTCACATT GAAGGTGGGGAAGTCAGTGGGACCATTGATGACTCTATCAGACATGCCATAACAAAACTGGCTCATTATCATGTGTGCTGCACCCGCAGT GCAGAGCAGCACCTGATATCCATGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCTGCCCTTCCTATGACAAACTTCTCTCAGCCAAG AACAAAGACTACATGAGCATCATTCGCATGTGGCTAGGGAGCAAAGAGATGGTTCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCC AACTTTCGTGCAGTTAAACACGTCCCATTTGACCAGTTTATACAGTTGGTTGCCCATGCTGGCTGTATGATTGGGAACAGCAGCTGTGGG GTTCGAGAAGTTGGAGCTTTTGGAACACCTGTGATCAACCTGGGAACACGTCAGATTGGAAGAGAAACAGGGGAGAATGTTCTTCATGTC CGGGATGCTGACACCCAAGACAAAATATTGCAAGCACTGCACCTTCAGTTTGGTAAACAGTACCCTTGTTCAAAGATATATGGGGATGGA AATGCTGTTCCAAGGATTTTGAAGTTTCTCAAATCTATCGATCTTCAAGAGCCACTGCAAAAGAAATTCTGCTTTCCTCCTGTGAAGGAG AATATCTCTCAAGATATTGACCATATTCTTGAAACTCTAAGTGCCTTGGCCGTTGATCTTGGCGGGACGAACCTCCGAGTTGCAATAGTC AGCATGAAGGGTGAAATAGTTAAGAAGTATACTCAGTTCAATCCTAAAACCTATGAAGAGAGGATTAATTTAATCCTACAGATGTGTGTG GAAGCTGCAGCAGAAGCTGTAAAACTGAACTGCAGAATTTTGGGAGTAGGCATTTCCACAGGTGGCCGTGTAAATCCTCGGGAAGGAATT GTGCTGCATTCAACCAAACTGATCCAAGAGTGGAACTCTGTGGACCTTAGGACCCCCCTTTCTGACACTTTGCATCTCCCTGTGTGGGTA GACAATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGAAAACTTTGTTACACTTATCACAGGCACA GGAATCGGTGGTGGAATTATCCATCAGCATGAATTGATCCACGGAAGCTCCTTCTGTGCTGCAGAACTGGGCCACCTTGTTGTGTCTCTG GATGGGCCTGATTGTTCCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCTCTGGAATGGCCTTGCAGAGGGAGGCAAAAAAGCTCCAT GATGAGGACCTGCTCTTGGTGGAAGGGATGTCAGTGCCAAAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGC AATGCGAAGGCCCAGAGCATCCTAAGAACAGGGCTATTGAGTGGCCAGACTTCCCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAG CAGGTGTTGCAGCTCTGCCTCCGATATCAAGATCACCTGCATCAGTGTGCAGAGGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGA ATCAAAGAGATGGATCTGTCTGTAGAAACTCTGTTCAGCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAG AAAGTGAACGAGATGTCCGCCATCCTCCGCCGCATACAGATGGGCATCGACCAGACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTG >33727_33727_6_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000539208_LOH12CR1_chr12_12588561_ENST00000542728_length(amino acids)=663AA_BP=534 MIEQDDFDINTRLHTIVRGEDEAAMVESVGLALVKLPDVLNRLKPDIMIVHGDRFDALALATSAALMNIRILHIEGGEVSGTIDDSIRHA ITKLAHYHVCCTRSAEQHLISMCEDHDRILLAGCPSYDKLLSAKNKDYMSIIRMWLGSKEMVRVMRKKGIEHHPNFRAVKHVPFDQFIQL VAHAGCMIGNSSCGVREVGAFGTPVINLGTRQIGRETGENVLHVRDADTQDKILQALHLQFGKQYPCSKIYGDGNAVPRILKFLKSIDLQ EPLQKKFCFPPVKENISQDIDHILETLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGV GISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGS SFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGNAKAQSILRTGLLSGQ TSPTNAKLEKLDSQQVLQLCLRYQDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYAEQIQKVNEMSAILRRIQMGI -------------------------------------------------------------- >33727_33727_7_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000539815_LOH12CR1_chr12_12588561_ENST00000298571_length(transcript)=2431nt_BP=1974nt AACTCTATTTTAAGAACCTCTCAAAACGAAACAAGCAAATCATGGAGAAGAATGGAAATAACCGAAAGCTGCGGGTTTGTGTTGCTACTT GTAACCGTGCAGATTATTCTAAACTTGCCCCGATCATGTTTGGCATTAAAACCGAACCTGAGTTCTTTGAACTTGATGTTGTGGTACTTG GCTCTCACCTGATAGATGACTATGGAAATACATATCGAATGATTGAACAAGATGACTTTGACATTAACACCAGGCTACACACAATTGTGA GGGGAGAAGATGAGGCAGCCATGGTGGAGTCAGTAGGCCTGGCCCTAGTGAAGCTGCCAGATGTCCTTAATCGCCTGAAGCCTGATATCA TGATTGTTCATGGAGACAGGTTTGATGCCCTGGCTCTGGCCACATCTGCTGCCTTGATGAACATCCGAATCCTTCACATTGAAGGTGGGG AAGTCAGTGGGACCATTGATGACTCTATCAGACATGCCATAACAAAACTGGCTCATTATCATGTGTGCTGCACCCGCAGTGCAGAGCAGC ACCTGATATCCATGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCTGCCCTTCCTATGACAAACTTCTCTCAGCCAAGAACAAAGACT ACATGAGCATCATTCGCATGTGGCTAGGTGATGATGTAAAATCTAAAGATTACATTGTTGCACTACAGCACCCTGTGACCACTGACATTA AGCATTCCATAAAAATGTTTGAATTAACATTGGATGCACTTATCTCATTTAACAAGCGGACCCTAGTCCTGTTTCCAAATATTGACGCAG GGAGCAAAGAGATGGTTCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCAACTTTCGTGCAGTTAAACACGTCCCATTTGACCAGT TTATACAGTTGGTTGCCCATGCTGGCTGTATGATTGGGAACAGCAGCTGTGGGGTTCGAGAAGTTGGAGCTTTTGGAACACCTGTGATCA ACCTGGGAACACGTCAGATTGGAAGAGAAACAGGGGAGAATGTTCTTCATGTCCGGGATGCTGACACCCAAGACAAAATATTGCAAGCAC TGCACCTTCAGTTTGGTAAACAGTACCCTTGTTCAAAGATATATGGGGATGGAAATGCTGTTCCAAGGATTTTGAAGTTTCTCAAATCTA TCGATCTTCAAGAGCCACTGCAAAAGAAATTCTGCTTTCCTCCTGTGAAGGAGAATATCTCTCAAGATATTGACCATATTCTTGAAACTC TAAGTGCCTTGGCCGTTGATCTTGGCGGGACGAACCTCCGAGTTGCAATAGTCAGCATGAAGGGTGAAATAGTTAAGAAGTATACTCAGT TCAATCCTAAAACCTATGAAGAGAGGATTAATTTAATCCTACAGATGTGTGTGGAAGCTGCAGCAGAAGCTGTAAAACTGAACTGCAGAA TTTTGGGAGTAGGCATTTCCACAGGTGGCCGTGTAAATCCTCGGGAAGGAATTGTGCTGCATTCAACCAAACTGATCCAAGAGTGGAACT CTGTGGACCTTAGGACCCCCCTTTCTGACACTTTGCATCTCCCTGTGTGGGTAGACAATGATGGCAACTGTGCTGCCCTGGCGGAAAGGA AATTTGGCCAAGGAAAGGGACTGGAAAACTTTGTTACACTTATCACAGGCACAGGAATCGGTGGTGGAATTATCCATCAGCATGAATTGA TCCACGGAAGCTCCTTCTGTGCTGCAGAACTGGGCCACCTTGTTGTGTCTCTGGATGGGCCTGATTGTTCCTGTGGAAGCCATGGGTGCA TTGAAGCATACGCCTCTGGAATGGCCTTGCAGAGGGAGGCAAAAAAGCTCCATGATGAGGACCTGCTCTTGGTGGAAGGGATGTCAGTGC CAAAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAACAGGGCTAT TGAGTGGCCAGACTTCCCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAGCAGGTGTTGCAGCTCTGCCTCCGATATCAAGATCACC TGCATCAGTGTGCAGAGGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGAATCAAAGAGATGGATCTGTCTGTAGAAACTCTGTTCA GCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAGAAAGTGAACGAGATGTCCGCCATCCTCCGCCGCATAC AGATGGGCATCGACCAGACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTGCCCGAGGGCGAGCGGCTGGAGCCCTTCAGCATGAAGC CCGACCGCGAGCTCAGGCTGTAGCTGCTGCCCGGCCTGCCTGGGGCTGGGAGCCCCAGACACCGACACCCTGAGGACGTGTGGAGCTAAG >33727_33727_7_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000539815_LOH12CR1_chr12_12588561_ENST00000298571_length(amino acids)=773AA_BP=644 MEKNGNNRKLRVCVATCNRADYSKLAPIMFGIKTEPEFFELDVVVLGSHLIDDYGNTYRMIEQDDFDINTRLHTIVRGEDEAAMVESVGL ALVKLPDVLNRLKPDIMIVHGDRFDALALATSAALMNIRILHIEGGEVSGTIDDSIRHAITKLAHYHVCCTRSAEQHLISMCEDHDRILL AGCPSYDKLLSAKNKDYMSIIRMWLGDDVKSKDYIVALQHPVTTDIKHSIKMFELTLDALISFNKRTLVLFPNIDAGSKEMVRVMRKKGI EHHPNFRAVKHVPFDQFIQLVAHAGCMIGNSSCGVREVGAFGTPVINLGTRQIGRETGENVLHVRDADTQDKILQALHLQFGKQYPCSKI YGDGNAVPRILKFLKSIDLQEPLQKKFCFPPVKENISQDIDHILETLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLIL QMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTL ITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQA AKLGNAKAQSILRTGLLSGQTSPTNAKLEKLDSQQVLQLCLRYQDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYA -------------------------------------------------------------- >33727_33727_8_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000539815_LOH12CR1_chr12_12588561_ENST00000314565_length(transcript)=3493nt_BP=1974nt AACTCTATTTTAAGAACCTCTCAAAACGAAACAAGCAAATCATGGAGAAGAATGGAAATAACCGAAAGCTGCGGGTTTGTGTTGCTACTT GTAACCGTGCAGATTATTCTAAACTTGCCCCGATCATGTTTGGCATTAAAACCGAACCTGAGTTCTTTGAACTTGATGTTGTGGTACTTG GCTCTCACCTGATAGATGACTATGGAAATACATATCGAATGATTGAACAAGATGACTTTGACATTAACACCAGGCTACACACAATTGTGA GGGGAGAAGATGAGGCAGCCATGGTGGAGTCAGTAGGCCTGGCCCTAGTGAAGCTGCCAGATGTCCTTAATCGCCTGAAGCCTGATATCA TGATTGTTCATGGAGACAGGTTTGATGCCCTGGCTCTGGCCACATCTGCTGCCTTGATGAACATCCGAATCCTTCACATTGAAGGTGGGG AAGTCAGTGGGACCATTGATGACTCTATCAGACATGCCATAACAAAACTGGCTCATTATCATGTGTGCTGCACCCGCAGTGCAGAGCAGC ACCTGATATCCATGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCTGCCCTTCCTATGACAAACTTCTCTCAGCCAAGAACAAAGACT ACATGAGCATCATTCGCATGTGGCTAGGTGATGATGTAAAATCTAAAGATTACATTGTTGCACTACAGCACCCTGTGACCACTGACATTA AGCATTCCATAAAAATGTTTGAATTAACATTGGATGCACTTATCTCATTTAACAAGCGGACCCTAGTCCTGTTTCCAAATATTGACGCAG GGAGCAAAGAGATGGTTCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCAACTTTCGTGCAGTTAAACACGTCCCATTTGACCAGT TTATACAGTTGGTTGCCCATGCTGGCTGTATGATTGGGAACAGCAGCTGTGGGGTTCGAGAAGTTGGAGCTTTTGGAACACCTGTGATCA ACCTGGGAACACGTCAGATTGGAAGAGAAACAGGGGAGAATGTTCTTCATGTCCGGGATGCTGACACCCAAGACAAAATATTGCAAGCAC TGCACCTTCAGTTTGGTAAACAGTACCCTTGTTCAAAGATATATGGGGATGGAAATGCTGTTCCAAGGATTTTGAAGTTTCTCAAATCTA TCGATCTTCAAGAGCCACTGCAAAAGAAATTCTGCTTTCCTCCTGTGAAGGAGAATATCTCTCAAGATATTGACCATATTCTTGAAACTC TAAGTGCCTTGGCCGTTGATCTTGGCGGGACGAACCTCCGAGTTGCAATAGTCAGCATGAAGGGTGAAATAGTTAAGAAGTATACTCAGT TCAATCCTAAAACCTATGAAGAGAGGATTAATTTAATCCTACAGATGTGTGTGGAAGCTGCAGCAGAAGCTGTAAAACTGAACTGCAGAA TTTTGGGAGTAGGCATTTCCACAGGTGGCCGTGTAAATCCTCGGGAAGGAATTGTGCTGCATTCAACCAAACTGATCCAAGAGTGGAACT CTGTGGACCTTAGGACCCCCCTTTCTGACACTTTGCATCTCCCTGTGTGGGTAGACAATGATGGCAACTGTGCTGCCCTGGCGGAAAGGA AATTTGGCCAAGGAAAGGGACTGGAAAACTTTGTTACACTTATCACAGGCACAGGAATCGGTGGTGGAATTATCCATCAGCATGAATTGA TCCACGGAAGCTCCTTCTGTGCTGCAGAACTGGGCCACCTTGTTGTGTCTCTGGATGGGCCTGATTGTTCCTGTGGAAGCCATGGGTGCA TTGAAGCATACGCCTCTGGAATGGCCTTGCAGAGGGAGGCAAAAAAGCTCCATGATGAGGACCTGCTCTTGGTGGAAGGGATGTCAGTGC CAAAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAACAGGGCTAT TGAGTGGCCAGACTTCCCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAGCAGGTGTTGCAGCTCTGCCTCCGATATCAAGATCACC TGCATCAGTGTGCAGAGGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGAATCAAAGAGATGGATCTGTCTGTAGAAACTCTGTTCA GCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAGAAAGTGAACGAGATGTCCGCCATCCTCCGCCGCATAC AGATGGGCATCGACCAGACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTGCCCGAGGGCGAGCGGCTGGAGCCCTTCAGCATGAAGC CCGACCGCGAGCTCAGGCTGTAGCTGCTGCCCGGCCTGCCTGGGGCTGGGAGCCCCAGACACCGACACCCTGAGGACGTGTGGAGCTAAG GTCATATCATCTGACCAGGTCTGGAGGCTGGCGGGAGGCTCCCTGAAAGTGGGTGCGAAGGAGTCCGGCTGGCATGAAAATCTGACTTTG CCCAGCTCTTTTCCTTGATGCAGTTTCCCGGTGTGGAAGGAACCTAACCAGTTCTCGGTGATAACTGAAGCTGGAACGTGTGAATTATTA GGAATTCTTTGAAGAACTCTGCATTGAGAATTATTTTTATTTAGTTTTTTTTTTTTTTTAATTGAGAGTATATAGTCCAGTCCAGGTACC GGAATAAAAATATGGAGACAAGGGGAAAATATTTTACGAAGCTCTGTGTTCTCAACGCCCTCATGAACTTTTCAGTAGGCTGTCTGGTTT ATGTGTGGTCAACTTGAAAAACTAATTGAATCTAGGTCTCTGTATTGTTCCTGTTTCTACCCTGACTGTTTCCGTCACACCAAGCCCTTA TCTGGGGCGCGTCTTCCTGCCCAGGTGGAACACTGGCATTTTGTTGACTGTCAGGTTAGGTGTCCCTTAGTCGTCATCAGAAGCTGAAGC CTTCCTTTCCACACCCTCATCAGATTCATCTCCACTGATAACCGGTTTCCTTGATGCAGACATAGTTTAGCTTTCTTTGACTGCAGAGAT GTCTCATTCCACAGACATTTCTTGAACCCATTTGATGTGTCCAATATTGTGCCAGGGATACAAATATGGCCGTATAGCCTCAGGCCTTCA TTTCTGAAAAGAAAAAAGCTCAAAAAGCTGCTGAATTTCTCTGGGAGTTTAGGAAAGGAAGTTATTTGAGTAACAACAAAAGTGCTTAGT GTCGTACTTTACACATCATAGGTGTTCTAATGGAAGCAAGGACTGGAGAAGCAAAGAGTGGAATGTGAGGAGCAGACCTAGGCAGACACC TTGAGACTAAAAGTCAGAGCTGAAGGGAGTCGCTGGGGCCAGGACGGCATGCAGGCCTGTACCCTGTTCCCTAAGTTCCTGCAAGCGTCG >33727_33727_8_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000539815_LOH12CR1_chr12_12588561_ENST00000314565_length(amino acids)=773AA_BP=644 MEKNGNNRKLRVCVATCNRADYSKLAPIMFGIKTEPEFFELDVVVLGSHLIDDYGNTYRMIEQDDFDINTRLHTIVRGEDEAAMVESVGL ALVKLPDVLNRLKPDIMIVHGDRFDALALATSAALMNIRILHIEGGEVSGTIDDSIRHAITKLAHYHVCCTRSAEQHLISMCEDHDRILL AGCPSYDKLLSAKNKDYMSIIRMWLGDDVKSKDYIVALQHPVTTDIKHSIKMFELTLDALISFNKRTLVLFPNIDAGSKEMVRVMRKKGI EHHPNFRAVKHVPFDQFIQLVAHAGCMIGNSSCGVREVGAFGTPVINLGTRQIGRETGENVLHVRDADTQDKILQALHLQFGKQYPCSKI YGDGNAVPRILKFLKSIDLQEPLQKKFCFPPVKENISQDIDHILETLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLIL QMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTL ITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQA AKLGNAKAQSILRTGLLSGQTSPTNAKLEKLDSQQVLQLCLRYQDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYA -------------------------------------------------------------- >33727_33727_9_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000539815_LOH12CR1_chr12_12588561_ENST00000542728_length(transcript)=2370nt_BP=1974nt AACTCTATTTTAAGAACCTCTCAAAACGAAACAAGCAAATCATGGAGAAGAATGGAAATAACCGAAAGCTGCGGGTTTGTGTTGCTACTT GTAACCGTGCAGATTATTCTAAACTTGCCCCGATCATGTTTGGCATTAAAACCGAACCTGAGTTCTTTGAACTTGATGTTGTGGTACTTG GCTCTCACCTGATAGATGACTATGGAAATACATATCGAATGATTGAACAAGATGACTTTGACATTAACACCAGGCTACACACAATTGTGA GGGGAGAAGATGAGGCAGCCATGGTGGAGTCAGTAGGCCTGGCCCTAGTGAAGCTGCCAGATGTCCTTAATCGCCTGAAGCCTGATATCA TGATTGTTCATGGAGACAGGTTTGATGCCCTGGCTCTGGCCACATCTGCTGCCTTGATGAACATCCGAATCCTTCACATTGAAGGTGGGG AAGTCAGTGGGACCATTGATGACTCTATCAGACATGCCATAACAAAACTGGCTCATTATCATGTGTGCTGCACCCGCAGTGCAGAGCAGC ACCTGATATCCATGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCTGCCCTTCCTATGACAAACTTCTCTCAGCCAAGAACAAAGACT ACATGAGCATCATTCGCATGTGGCTAGGTGATGATGTAAAATCTAAAGATTACATTGTTGCACTACAGCACCCTGTGACCACTGACATTA AGCATTCCATAAAAATGTTTGAATTAACATTGGATGCACTTATCTCATTTAACAAGCGGACCCTAGTCCTGTTTCCAAATATTGACGCAG GGAGCAAAGAGATGGTTCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCAACTTTCGTGCAGTTAAACACGTCCCATTTGACCAGT TTATACAGTTGGTTGCCCATGCTGGCTGTATGATTGGGAACAGCAGCTGTGGGGTTCGAGAAGTTGGAGCTTTTGGAACACCTGTGATCA ACCTGGGAACACGTCAGATTGGAAGAGAAACAGGGGAGAATGTTCTTCATGTCCGGGATGCTGACACCCAAGACAAAATATTGCAAGCAC TGCACCTTCAGTTTGGTAAACAGTACCCTTGTTCAAAGATATATGGGGATGGAAATGCTGTTCCAAGGATTTTGAAGTTTCTCAAATCTA TCGATCTTCAAGAGCCACTGCAAAAGAAATTCTGCTTTCCTCCTGTGAAGGAGAATATCTCTCAAGATATTGACCATATTCTTGAAACTC TAAGTGCCTTGGCCGTTGATCTTGGCGGGACGAACCTCCGAGTTGCAATAGTCAGCATGAAGGGTGAAATAGTTAAGAAGTATACTCAGT TCAATCCTAAAACCTATGAAGAGAGGATTAATTTAATCCTACAGATGTGTGTGGAAGCTGCAGCAGAAGCTGTAAAACTGAACTGCAGAA TTTTGGGAGTAGGCATTTCCACAGGTGGCCGTGTAAATCCTCGGGAAGGAATTGTGCTGCATTCAACCAAACTGATCCAAGAGTGGAACT CTGTGGACCTTAGGACCCCCCTTTCTGACACTTTGCATCTCCCTGTGTGGGTAGACAATGATGGCAACTGTGCTGCCCTGGCGGAAAGGA AATTTGGCCAAGGAAAGGGACTGGAAAACTTTGTTACACTTATCACAGGCACAGGAATCGGTGGTGGAATTATCCATCAGCATGAATTGA TCCACGGAAGCTCCTTCTGTGCTGCAGAACTGGGCCACCTTGTTGTGTCTCTGGATGGGCCTGATTGTTCCTGTGGAAGCCATGGGTGCA TTGAAGCATACGCCTCTGGAATGGCCTTGCAGAGGGAGGCAAAAAAGCTCCATGATGAGGACCTGCTCTTGGTGGAAGGGATGTCAGTGC CAAAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAACAGGGCTAT TGAGTGGCCAGACTTCCCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAGCAGGTGTTGCAGCTCTGCCTCCGATATCAAGATCACC TGCATCAGTGTGCAGAGGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGAATCAAAGAGATGGATCTGTCTGTAGAAACTCTGTTCA GCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAGAAAGTGAACGAGATGTCCGCCATCCTCCGCCGCATAC AGATGGGCATCGACCAGACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTGCCCGAGGGCGAGCGGCTGGAGCCCTTCAGCATGAAGC >33727_33727_9_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000539815_LOH12CR1_chr12_12588561_ENST00000542728_length(amino acids)=773AA_BP=644 MEKNGNNRKLRVCVATCNRADYSKLAPIMFGIKTEPEFFELDVVVLGSHLIDDYGNTYRMIEQDDFDINTRLHTIVRGEDEAAMVESVGL ALVKLPDVLNRLKPDIMIVHGDRFDALALATSAALMNIRILHIEGGEVSGTIDDSIRHAITKLAHYHVCCTRSAEQHLISMCEDHDRILL AGCPSYDKLLSAKNKDYMSIIRMWLGDDVKSKDYIVALQHPVTTDIKHSIKMFELTLDALISFNKRTLVLFPNIDAGSKEMVRVMRKKGI EHHPNFRAVKHVPFDQFIQLVAHAGCMIGNSSCGVREVGAFGTPVINLGTRQIGRETGENVLHVRDADTQDKILQALHLQFGKQYPCSKI YGDGNAVPRILKFLKSIDLQEPLQKKFCFPPVKENISQDIDHILETLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLIL QMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTL ITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQA AKLGNAKAQSILRTGLLSGQTSPTNAKLEKLDSQQVLQLCLRYQDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYA -------------------------------------------------------------- >33727_33727_10_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000543356_LOH12CR1_chr12_12588561_ENST00000298571_length(transcript)=2375nt_BP=1918nt ATGCCTATTGGTGACTGCTCCGTGGCAGCTAAACCAAGAAAACAGCTGCTCTGCTCATTATTTCAAACCACACTAGGGTACAGAGCTCGT GCTTCGGGATGGAAACCTATGGTTATCTGCAGAGGGAGTCATGCTTTCAAGGACCTCATAAATACATATCGAATGATTGAACAAGATGAC TTTGACATTAACACCAGGCTACACACAATTGTGAGGGGAGAAGATGAGGCAGCCATGGTGGAGTCAGTAGGCCTGGCCCTAGTGAAGCTG CCAGATGTCCTTAATCGCCTGAAGCCTGATATCATGATTGTTCATGGAGACAGGTTTGATGCCCTGGCTCTGGCCACATCTGCTGCCTTG ATGAACATCCGAATCCTTCACATTGAAGGTGGGGAAGTCAGTGGGACCATTGATGACTCTATCAGACATGCCATAACAAAACTGGCTCAT TATCATGTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATATCCATGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCTGCCCTTCC TATGACAAACTTCTCTCAGCCAAGAACAAAGACTACATGAGCATCATTCGCATGTGGCTAGGTGATGATGTAAAATCTAAAGATTACATT GTTGCACTACAGCACCCTGTGACCACTGACATTAAGCATTCCATAAAAATGTTTGAATTAACATTGGATGCACTTATCTCATTTAACAAG CGGACCCTAGTCCTGTTTCCAAATATTGACGCAGGGAGCAAAGAGATGGTTCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCAAC TTTCGTGCAGTTAAACACGTCCCATTTGACCAGTTTATACAGTTGGTTGCCCATGCTGGCTGTATGATTGGGAACAGCAGCTGTGGGGTT CGAGAAGTTGGAGCTTTTGGAACACCTGTGATCAACCTGGGAACACGTCAGATTGGAAGAGAAACAGGGGAGAATGTTCTTCATGTCCGG GATGCTGACACCCAAGACAAAATATTGCAAGCACTGCACCTTCAGTTTGGTAAACAGTACCCTTGTTCAAAGATATATGGGGATGGAAAT GCTGTTCCAAGGATTTTGAAGTTTCTCAAATCTATCGATCTTCAAGAGCCACTGCAAAAGAAATTCTGCTTTCCTCCTGTGAAGGAGAAT ATCTCTCAAGATATTGACCATATTCTTGAAACTCTAAGTGCCTTGGCCGTTGATCTTGGCGGGACGAACCTCCGAGTTGCAATAGTCAGC ATGAAGGGTGAAATAGTTAAGAAGTATACTCAGTTCAATCCTAAAACCTATGAAGAGAGGATTAATTTAATCCTACAGATGTGTGTGGAA GCTGCAGCAGAAGCTGTAAAACTGAACTGCAGAATTTTGGGAGTAGGCATTTCCACAGGTGGCCGTGTAAATCCTCGGGAAGGAATTGTG CTGCATTCAACCAAACTGATCCAAGAGTGGAACTCTGTGGACCTTAGGACCCCCCTTTCTGACACTTTGCATCTCCCTGTGTGGGTAGAC AATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGAAAACTTTGTTACACTTATCACAGGCACAGGA ATCGGTGGTGGAATTATCCATCAGCATGAATTGATCCACGGAAGCTCCTTCTGTGCTGCAGAACTGGGCCACCTTGTTGTGTCTCTGGAT GGGCCTGATTGTTCCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCTCTGGAATGGCCTTGCAGAGGGAGGCAAAAAAGCTCCATGAT GAGGACCTGCTCTTGGTGGAAGGGATGTCAGTGCCAAAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAAT GCGAAGGCCCAGAGCATCCTAAGAACAGGGCTATTGAGTGGCCAGACTTCCCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAGCAG GTGTTGCAGCTCTGCCTCCGATATCAAGATCACCTGCATCAGTGTGCAGAGGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGAATC AAAGAGATGGATCTGTCTGTAGAAACTCTGTTCAGCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAGAAA GTGAACGAGATGTCCGCCATCCTCCGCCGCATACAGATGGGCATCGACCAGACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTGCCC GAGGGCGAGCGGCTGGAGCCCTTCAGCATGAAGCCCGACCGCGAGCTCAGGCTGTAGCTGCTGCCCGGCCTGCCTGGGGCTGGGAGCCCC >33727_33727_10_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000543356_LOH12CR1_chr12_12588561_ENST00000298571_length(amino acids)=768AA_BP=639 MPIGDCSVAAKPRKQLLCSLFQTTLGYRARASGWKPMVICRGSHAFKDLINTYRMIEQDDFDINTRLHTIVRGEDEAAMVESVGLALVKL PDVLNRLKPDIMIVHGDRFDALALATSAALMNIRILHIEGGEVSGTIDDSIRHAITKLAHYHVCCTRSAEQHLISMCEDHDRILLAGCPS YDKLLSAKNKDYMSIIRMWLGDDVKSKDYIVALQHPVTTDIKHSIKMFELTLDALISFNKRTLVLFPNIDAGSKEMVRVMRKKGIEHHPN FRAVKHVPFDQFIQLVAHAGCMIGNSSCGVREVGAFGTPVINLGTRQIGRETGENVLHVRDADTQDKILQALHLQFGKQYPCSKIYGDGN AVPRILKFLKSIDLQEPLQKKFCFPPVKENISQDIDHILETLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVE AAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTG IGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGN AKAQSILRTGLLSGQTSPTNAKLEKLDSQQVLQLCLRYQDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYAEQIQK -------------------------------------------------------------- >33727_33727_11_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000543356_LOH12CR1_chr12_12588561_ENST00000314565_length(transcript)=3437nt_BP=1918nt ATGCCTATTGGTGACTGCTCCGTGGCAGCTAAACCAAGAAAACAGCTGCTCTGCTCATTATTTCAAACCACACTAGGGTACAGAGCTCGT GCTTCGGGATGGAAACCTATGGTTATCTGCAGAGGGAGTCATGCTTTCAAGGACCTCATAAATACATATCGAATGATTGAACAAGATGAC TTTGACATTAACACCAGGCTACACACAATTGTGAGGGGAGAAGATGAGGCAGCCATGGTGGAGTCAGTAGGCCTGGCCCTAGTGAAGCTG CCAGATGTCCTTAATCGCCTGAAGCCTGATATCATGATTGTTCATGGAGACAGGTTTGATGCCCTGGCTCTGGCCACATCTGCTGCCTTG ATGAACATCCGAATCCTTCACATTGAAGGTGGGGAAGTCAGTGGGACCATTGATGACTCTATCAGACATGCCATAACAAAACTGGCTCAT TATCATGTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATATCCATGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCTGCCCTTCC TATGACAAACTTCTCTCAGCCAAGAACAAAGACTACATGAGCATCATTCGCATGTGGCTAGGTGATGATGTAAAATCTAAAGATTACATT GTTGCACTACAGCACCCTGTGACCACTGACATTAAGCATTCCATAAAAATGTTTGAATTAACATTGGATGCACTTATCTCATTTAACAAG CGGACCCTAGTCCTGTTTCCAAATATTGACGCAGGGAGCAAAGAGATGGTTCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCAAC TTTCGTGCAGTTAAACACGTCCCATTTGACCAGTTTATACAGTTGGTTGCCCATGCTGGCTGTATGATTGGGAACAGCAGCTGTGGGGTT CGAGAAGTTGGAGCTTTTGGAACACCTGTGATCAACCTGGGAACACGTCAGATTGGAAGAGAAACAGGGGAGAATGTTCTTCATGTCCGG GATGCTGACACCCAAGACAAAATATTGCAAGCACTGCACCTTCAGTTTGGTAAACAGTACCCTTGTTCAAAGATATATGGGGATGGAAAT GCTGTTCCAAGGATTTTGAAGTTTCTCAAATCTATCGATCTTCAAGAGCCACTGCAAAAGAAATTCTGCTTTCCTCCTGTGAAGGAGAAT ATCTCTCAAGATATTGACCATATTCTTGAAACTCTAAGTGCCTTGGCCGTTGATCTTGGCGGGACGAACCTCCGAGTTGCAATAGTCAGC ATGAAGGGTGAAATAGTTAAGAAGTATACTCAGTTCAATCCTAAAACCTATGAAGAGAGGATTAATTTAATCCTACAGATGTGTGTGGAA GCTGCAGCAGAAGCTGTAAAACTGAACTGCAGAATTTTGGGAGTAGGCATTTCCACAGGTGGCCGTGTAAATCCTCGGGAAGGAATTGTG CTGCATTCAACCAAACTGATCCAAGAGTGGAACTCTGTGGACCTTAGGACCCCCCTTTCTGACACTTTGCATCTCCCTGTGTGGGTAGAC AATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGAAAACTTTGTTACACTTATCACAGGCACAGGA ATCGGTGGTGGAATTATCCATCAGCATGAATTGATCCACGGAAGCTCCTTCTGTGCTGCAGAACTGGGCCACCTTGTTGTGTCTCTGGAT GGGCCTGATTGTTCCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCTCTGGAATGGCCTTGCAGAGGGAGGCAAAAAAGCTCCATGAT GAGGACCTGCTCTTGGTGGAAGGGATGTCAGTGCCAAAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAAT GCGAAGGCCCAGAGCATCCTAAGAACAGGGCTATTGAGTGGCCAGACTTCCCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAGCAG GTGTTGCAGCTCTGCCTCCGATATCAAGATCACCTGCATCAGTGTGCAGAGGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGAATC AAAGAGATGGATCTGTCTGTAGAAACTCTGTTCAGCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAGAAA GTGAACGAGATGTCCGCCATCCTCCGCCGCATACAGATGGGCATCGACCAGACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTGCCC GAGGGCGAGCGGCTGGAGCCCTTCAGCATGAAGCCCGACCGCGAGCTCAGGCTGTAGCTGCTGCCCGGCCTGCCTGGGGCTGGGAGCCCC AGACACCGACACCCTGAGGACGTGTGGAGCTAAGGTCATATCATCTGACCAGGTCTGGAGGCTGGCGGGAGGCTCCCTGAAAGTGGGTGC GAAGGAGTCCGGCTGGCATGAAAATCTGACTTTGCCCAGCTCTTTTCCTTGATGCAGTTTCCCGGTGTGGAAGGAACCTAACCAGTTCTC GGTGATAACTGAAGCTGGAACGTGTGAATTATTAGGAATTCTTTGAAGAACTCTGCATTGAGAATTATTTTTATTTAGTTTTTTTTTTTT TTTAATTGAGAGTATATAGTCCAGTCCAGGTACCGGAATAAAAATATGGAGACAAGGGGAAAATATTTTACGAAGCTCTGTGTTCTCAAC GCCCTCATGAACTTTTCAGTAGGCTGTCTGGTTTATGTGTGGTCAACTTGAAAAACTAATTGAATCTAGGTCTCTGTATTGTTCCTGTTT CTACCCTGACTGTTTCCGTCACACCAAGCCCTTATCTGGGGCGCGTCTTCCTGCCCAGGTGGAACACTGGCATTTTGTTGACTGTCAGGT TAGGTGTCCCTTAGTCGTCATCAGAAGCTGAAGCCTTCCTTTCCACACCCTCATCAGATTCATCTCCACTGATAACCGGTTTCCTTGATG CAGACATAGTTTAGCTTTCTTTGACTGCAGAGATGTCTCATTCCACAGACATTTCTTGAACCCATTTGATGTGTCCAATATTGTGCCAGG GATACAAATATGGCCGTATAGCCTCAGGCCTTCATTTCTGAAAAGAAAAAAGCTCAAAAAGCTGCTGAATTTCTCTGGGAGTTTAGGAAA GGAAGTTATTTGAGTAACAACAAAAGTGCTTAGTGTCGTACTTTACACATCATAGGTGTTCTAATGGAAGCAAGGACTGGAGAAGCAAAG AGTGGAATGTGAGGAGCAGACCTAGGCAGACACCTTGAGACTAAAAGTCAGAGCTGAAGGGAGTCGCTGGGGCCAGGACGGCATGCAGGC CTGTACCCTGTTCCCTAAGTTCCTGCAAGCGTCGGGAGGTGTGTTTTCAGATACCAGAAAGAGCCTTCAGTAGATTCACAAGATTAAAAT >33727_33727_11_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000543356_LOH12CR1_chr12_12588561_ENST00000314565_length(amino acids)=768AA_BP=639 MPIGDCSVAAKPRKQLLCSLFQTTLGYRARASGWKPMVICRGSHAFKDLINTYRMIEQDDFDINTRLHTIVRGEDEAAMVESVGLALVKL PDVLNRLKPDIMIVHGDRFDALALATSAALMNIRILHIEGGEVSGTIDDSIRHAITKLAHYHVCCTRSAEQHLISMCEDHDRILLAGCPS YDKLLSAKNKDYMSIIRMWLGDDVKSKDYIVALQHPVTTDIKHSIKMFELTLDALISFNKRTLVLFPNIDAGSKEMVRVMRKKGIEHHPN FRAVKHVPFDQFIQLVAHAGCMIGNSSCGVREVGAFGTPVINLGTRQIGRETGENVLHVRDADTQDKILQALHLQFGKQYPCSKIYGDGN AVPRILKFLKSIDLQEPLQKKFCFPPVKENISQDIDHILETLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVE AAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTG IGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGN AKAQSILRTGLLSGQTSPTNAKLEKLDSQQVLQLCLRYQDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYAEQIQK -------------------------------------------------------------- >33727_33727_12_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000543356_LOH12CR1_chr12_12588561_ENST00000542728_length(transcript)=2314nt_BP=1918nt ATGCCTATTGGTGACTGCTCCGTGGCAGCTAAACCAAGAAAACAGCTGCTCTGCTCATTATTTCAAACCACACTAGGGTACAGAGCTCGT GCTTCGGGATGGAAACCTATGGTTATCTGCAGAGGGAGTCATGCTTTCAAGGACCTCATAAATACATATCGAATGATTGAACAAGATGAC TTTGACATTAACACCAGGCTACACACAATTGTGAGGGGAGAAGATGAGGCAGCCATGGTGGAGTCAGTAGGCCTGGCCCTAGTGAAGCTG CCAGATGTCCTTAATCGCCTGAAGCCTGATATCATGATTGTTCATGGAGACAGGTTTGATGCCCTGGCTCTGGCCACATCTGCTGCCTTG ATGAACATCCGAATCCTTCACATTGAAGGTGGGGAAGTCAGTGGGACCATTGATGACTCTATCAGACATGCCATAACAAAACTGGCTCAT TATCATGTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATATCCATGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCTGCCCTTCC TATGACAAACTTCTCTCAGCCAAGAACAAAGACTACATGAGCATCATTCGCATGTGGCTAGGTGATGATGTAAAATCTAAAGATTACATT GTTGCACTACAGCACCCTGTGACCACTGACATTAAGCATTCCATAAAAATGTTTGAATTAACATTGGATGCACTTATCTCATTTAACAAG CGGACCCTAGTCCTGTTTCCAAATATTGACGCAGGGAGCAAAGAGATGGTTCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCAAC TTTCGTGCAGTTAAACACGTCCCATTTGACCAGTTTATACAGTTGGTTGCCCATGCTGGCTGTATGATTGGGAACAGCAGCTGTGGGGTT CGAGAAGTTGGAGCTTTTGGAACACCTGTGATCAACCTGGGAACACGTCAGATTGGAAGAGAAACAGGGGAGAATGTTCTTCATGTCCGG GATGCTGACACCCAAGACAAAATATTGCAAGCACTGCACCTTCAGTTTGGTAAACAGTACCCTTGTTCAAAGATATATGGGGATGGAAAT GCTGTTCCAAGGATTTTGAAGTTTCTCAAATCTATCGATCTTCAAGAGCCACTGCAAAAGAAATTCTGCTTTCCTCCTGTGAAGGAGAAT ATCTCTCAAGATATTGACCATATTCTTGAAACTCTAAGTGCCTTGGCCGTTGATCTTGGCGGGACGAACCTCCGAGTTGCAATAGTCAGC ATGAAGGGTGAAATAGTTAAGAAGTATACTCAGTTCAATCCTAAAACCTATGAAGAGAGGATTAATTTAATCCTACAGATGTGTGTGGAA GCTGCAGCAGAAGCTGTAAAACTGAACTGCAGAATTTTGGGAGTAGGCATTTCCACAGGTGGCCGTGTAAATCCTCGGGAAGGAATTGTG CTGCATTCAACCAAACTGATCCAAGAGTGGAACTCTGTGGACCTTAGGACCCCCCTTTCTGACACTTTGCATCTCCCTGTGTGGGTAGAC AATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGAAAACTTTGTTACACTTATCACAGGCACAGGA ATCGGTGGTGGAATTATCCATCAGCATGAATTGATCCACGGAAGCTCCTTCTGTGCTGCAGAACTGGGCCACCTTGTTGTGTCTCTGGAT GGGCCTGATTGTTCCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCTCTGGAATGGCCTTGCAGAGGGAGGCAAAAAAGCTCCATGAT GAGGACCTGCTCTTGGTGGAAGGGATGTCAGTGCCAAAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAAT GCGAAGGCCCAGAGCATCCTAAGAACAGGGCTATTGAGTGGCCAGACTTCCCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAGCAG GTGTTGCAGCTCTGCCTCCGATATCAAGATCACCTGCATCAGTGTGCAGAGGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGAATC AAAGAGATGGATCTGTCTGTAGAAACTCTGTTCAGCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAGAAA GTGAACGAGATGTCCGCCATCCTCCGCCGCATACAGATGGGCATCGACCAGACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTGCCC >33727_33727_12_GNE-LOH12CR1_GNE_chr9_36218179_ENST00000543356_LOH12CR1_chr12_12588561_ENST00000542728_length(amino acids)=768AA_BP=639 MPIGDCSVAAKPRKQLLCSLFQTTLGYRARASGWKPMVICRGSHAFKDLINTYRMIEQDDFDINTRLHTIVRGEDEAAMVESVGLALVKL PDVLNRLKPDIMIVHGDRFDALALATSAALMNIRILHIEGGEVSGTIDDSIRHAITKLAHYHVCCTRSAEQHLISMCEDHDRILLAGCPS YDKLLSAKNKDYMSIIRMWLGDDVKSKDYIVALQHPVTTDIKHSIKMFELTLDALISFNKRTLVLFPNIDAGSKEMVRVMRKKGIEHHPN FRAVKHVPFDQFIQLVAHAGCMIGNSSCGVREVGAFGTPVINLGTRQIGRETGENVLHVRDADTQDKILQALHLQFGKQYPCSKIYGDGN AVPRILKFLKSIDLQEPLQKKFCFPPVKENISQDIDHILETLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVE AAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTG IGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGN AKAQSILRTGLLSGQTSPTNAKLEKLDSQQVLQLCLRYQDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYAEQIQK -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for GNE-LOH12CR1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for GNE-LOH12CR1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for GNE-LOH12CR1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |