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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:GNPAT-CAPN9 (FusionGDB2 ID:33804)

Fusion Gene Summary for GNPAT-CAPN9

check button Fusion gene summary
Fusion gene informationFusion gene name: GNPAT-CAPN9
Fusion gene ID: 33804
HgeneTgene
Gene symbol

GNPAT

CAPN9

Gene ID

8443

10753

Gene nameglyceronephosphate O-acyltransferasecalpain 9
SynonymsDAP-AT|DAPAT|DHAPAT|RCDP2GC36|nCL-4
Cytomap

1q42.2

1q42.2

Type of geneprotein-codingprotein-coding
Descriptiondihydroxyacetone phosphate acyltransferaseDHAP-ATacyl-CoA:dihydroxyacetonephosphateacyltransferaseglycerone-phosphate O-acyltransferasecalpain-9digestive tract-specific calpainnew calpain 4novel calpain large subunit-4
Modification date2020031320200313
UniProtAcc

O15228

O14815

Ensembl transtripts involved in fusion geneENST00000366646, ENST00000366647, 
ENST00000469332, 		ENST00000480004, 
ENST00000271971, ENST00000354537, 
ENST00000366666, 
Fusion gene scores* DoF score6 X 5 X 6=1802 X 3 X 2=12
# samples 72
** MAII scorelog2(7/180*10)=-1.36257007938471
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(2/12*10)=0.736965594166206
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: GNPAT [Title/Abstract] AND CAPN9 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointGNPAT(231386889)-CAPN9(230923268), # samples:3
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneGNPAT

GO:0008611

ether lipid biosynthetic process

15687349


check buttonFusion gene breakpoints across GNPAT (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across CAPN9 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4BLCATCGA-PQ-A6FN-01AGNPATchr1

231377202

+CAPN9chr1

230923268

+
ChimerDB4BLCATCGA-PQ-A6FN-01AGNPATchr1

231386889

-CAPN9chr1

230923268

+
ChimerDB4BLCATCGA-PQ-A6FN-01AGNPATchr1

231386889

+CAPN9chr1

230923268

+
ChimerDB4BLCATCGA-PQ-A6FN-01AGNPATchr1

231386889

+CAPN9chr1

230925878

+


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Fusion Gene ORF analysis for GNPAT-CAPN9

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-intronENST00000366646ENST00000480004GNPATchr1

231377202

+CAPN9chr1

230923268

+
5CDS-intronENST00000366647ENST00000480004GNPATchr1

231377202

+CAPN9chr1

230923268

+
5CDS-intronENST00000366647ENST00000480004GNPATchr1

231386889

+CAPN9chr1

230923268

+
5CDS-intronENST00000366647ENST00000480004GNPATchr1

231386889

+CAPN9chr1

230925878

+
In-frameENST00000366646ENST00000271971GNPATchr1

231377202

+CAPN9chr1

230923268

+
In-frameENST00000366646ENST00000354537GNPATchr1

231377202

+CAPN9chr1

230923268

+
In-frameENST00000366646ENST00000366666GNPATchr1

231377202

+CAPN9chr1

230923268

+
In-frameENST00000366647ENST00000271971GNPATchr1

231377202

+CAPN9chr1

230923268

+
In-frameENST00000366647ENST00000271971GNPATchr1

231386889

+CAPN9chr1

230923268

+
In-frameENST00000366647ENST00000271971GNPATchr1

231386889

+CAPN9chr1

230925878

+
In-frameENST00000366647ENST00000354537GNPATchr1

231377202

+CAPN9chr1

230923268

+
In-frameENST00000366647ENST00000354537GNPATchr1

231386889

+CAPN9chr1

230923268

+
In-frameENST00000366647ENST00000354537GNPATchr1

231386889

+CAPN9chr1

230925878

+
In-frameENST00000366647ENST00000366666GNPATchr1

231377202

+CAPN9chr1

230923268

+
In-frameENST00000366647ENST00000366666GNPATchr1

231386889

+CAPN9chr1

230923268

+
In-frameENST00000366647ENST00000366666GNPATchr1

231386889

+CAPN9chr1

230925878

+
intron-3CDSENST00000366646ENST00000271971GNPATchr1

231386889

+CAPN9chr1

230923268

+
intron-3CDSENST00000366646ENST00000271971GNPATchr1

231386889

+CAPN9chr1

230925878

+
intron-3CDSENST00000366646ENST00000354537GNPATchr1

231386889

+CAPN9chr1

230923268

+
intron-3CDSENST00000366646ENST00000354537GNPATchr1

231386889

+CAPN9chr1

230925878

+
intron-3CDSENST00000366646ENST00000366666GNPATchr1

231386889

+CAPN9chr1

230923268

+
intron-3CDSENST00000366646ENST00000366666GNPATchr1

231386889

+CAPN9chr1

230925878

+
intron-3CDSENST00000469332ENST00000271971GNPATchr1

231377202

+CAPN9chr1

230923268

+
intron-3CDSENST00000469332ENST00000271971GNPATchr1

231386889

+CAPN9chr1

230923268

+
intron-3CDSENST00000469332ENST00000271971GNPATchr1

231386889

+CAPN9chr1

230925878

+
intron-3CDSENST00000469332ENST00000354537GNPATchr1

231377202

+CAPN9chr1

230923268

+
intron-3CDSENST00000469332ENST00000354537GNPATchr1

231386889

+CAPN9chr1

230923268

+
intron-3CDSENST00000469332ENST00000354537GNPATchr1

231386889

+CAPN9chr1

230925878

+
intron-3CDSENST00000469332ENST00000366666GNPATchr1

231377202

+CAPN9chr1

230923268

+
intron-3CDSENST00000469332ENST00000366666GNPATchr1

231386889

+CAPN9chr1

230923268

+
intron-3CDSENST00000469332ENST00000366666GNPATchr1

231386889

+CAPN9chr1

230925878

+
intron-intronENST00000366646ENST00000480004GNPATchr1

231386889

+CAPN9chr1

230923268

+
intron-intronENST00000366646ENST00000480004GNPATchr1

231386889

+CAPN9chr1

230925878

+
intron-intronENST00000469332ENST00000480004GNPATchr1

231377202

+CAPN9chr1

230923268

+
intron-intronENST00000469332ENST00000480004GNPATchr1

231386889

+CAPN9chr1

230923268

+
intron-intronENST00000469332ENST00000480004GNPATchr1

231386889

+CAPN9chr1

230925878

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000366647GNPATchr1231386889+ENST00000271971CAPN9chr1230923268+1161430169984271
ENST00000366647GNPATchr1231386889+ENST00000354537CAPN9chr1230923268+1392430169984271
ENST00000366647GNPATchr1231386889+ENST00000366666CAPN9chr1230923268+1160430169984271
ENST00000366647GNPATchr1231377202+ENST00000271971CAPN9chr1230923268+978247169801210
ENST00000366647GNPATchr1231377202+ENST00000354537CAPN9chr1230923268+1209247169801210
ENST00000366647GNPATchr1231377202+ENST00000366666CAPN9chr1230923268+977247169801210
ENST00000366646GNPATchr1231377202+ENST00000271971CAPN9chr1230923268+976245167799210
ENST00000366646GNPATchr1231377202+ENST00000354537CAPN9chr1230923268+1207245167799210
ENST00000366646GNPATchr1231377202+ENST00000366666CAPN9chr1230923268+975245167799210
ENST00000366647GNPATchr1231386889+ENST00000271971CAPN9chr1230925878+1080430169903244
ENST00000366647GNPATchr1231386889+ENST00000354537CAPN9chr1230925878+1311430169903244
ENST00000366647GNPATchr1231386889+ENST00000366666CAPN9chr1230925878+1079430169903244

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000366647ENST00000271971GNPATchr1231386889+CAPN9chr1230923268+0.002761210.99723876
ENST00000366647ENST00000354537GNPATchr1231386889+CAPN9chr1230923268+0.0018757090.9981243
ENST00000366647ENST00000366666GNPATchr1231386889+CAPN9chr1230923268+0.0028228850.9971771
ENST00000366647ENST00000271971GNPATchr1231377202+CAPN9chr1230923268+0.0013164830.9986835
ENST00000366647ENST00000354537GNPATchr1231377202+CAPN9chr1230923268+0.0011956640.99880433
ENST00000366647ENST00000366666GNPATchr1231377202+CAPN9chr1230923268+0.0013492830.9986507
ENST00000366646ENST00000271971GNPATchr1231377202+CAPN9chr1230923268+0.0012738350.9987262
ENST00000366646ENST00000354537GNPATchr1231377202+CAPN9chr1230923268+0.0011754050.99882454
ENST00000366646ENST00000366666GNPATchr1231377202+CAPN9chr1230923268+0.001305980.998694
ENST00000366647ENST00000271971GNPATchr1231386889+CAPN9chr1230925878+0.0046730980.9953269
ENST00000366647ENST00000354537GNPATchr1231386889+CAPN9chr1230925878+0.0032946060.99670535
ENST00000366647ENST00000366666GNPATchr1231386889+CAPN9chr1230925878+0.0047931990.9952068

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Fusion Genomic Features for GNPAT-CAPN9


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
GNPATchr1231386889+CAPN9chr1230925877+0.577613530.42238647
GNPATchr1231386889+CAPN9chr1230923267+2.28E-050.99997723
GNPATchr1231377202+CAPN9chr1230923267+2.60E-060.9999974
GNPATchr1231386889+CAPN9chr1230925877+0.577613530.42238647
GNPATchr1231386889+CAPN9chr1230923267+2.28E-050.99997723
GNPATchr1231377202+CAPN9chr1230923267+2.60E-060.9999974

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

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Fusion Protein Features for GNPAT-CAPN9


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:231386889/chr1:230923268)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
GNPAT

O15228

CAPN9

O14815

FUNCTION: Dihydroxyacetonephosphate acyltransferase involved in plasmalogen biosynthesis. {ECO:0000269|PubMed:15687349}.FUNCTION: Calcium-regulated non-lysosomal thiol-protease.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneGNPATchr1:231377202chr1:230923268ENST00000366647+1163_926681.0Compositional biasNote=Poly-Ser
HgeneGNPATchr1:231386889chr1:230923268ENST00000366647+2163_987681.0Compositional biasNote=Poly-Ser
HgeneGNPATchr1:231386889chr1:230925878ENST00000366647+2163_987681.0Compositional biasNote=Poly-Ser
TgeneCAPN9chr1:231377202chr1:230923268ENST000002719711120574_585506691.0Calcium binding1
TgeneCAPN9chr1:231377202chr1:230923268ENST000002719711120604_615506691.0Calcium binding2
TgeneCAPN9chr1:231377202chr1:230923268ENST000003545371019574_585480665.0Calcium binding1
TgeneCAPN9chr1:231377202chr1:230923268ENST000003545371019604_615480665.0Calcium binding2
TgeneCAPN9chr1:231386889chr1:230923268ENST000002719711120574_585506691.0Calcium binding1
TgeneCAPN9chr1:231386889chr1:230923268ENST000002719711120604_615506691.0Calcium binding2
TgeneCAPN9chr1:231386889chr1:230923268ENST000003545371019574_585480665.0Calcium binding1
TgeneCAPN9chr1:231386889chr1:230923268ENST000003545371019604_615480665.0Calcium binding2
TgeneCAPN9chr1:231386889chr1:230925878ENST000002719711220574_585533691.0Calcium binding1
TgeneCAPN9chr1:231386889chr1:230925878ENST000002719711220604_615533691.0Calcium binding2
TgeneCAPN9chr1:231386889chr1:230925878ENST000003545371119574_585507665.0Calcium binding1
TgeneCAPN9chr1:231386889chr1:230925878ENST000003545371119604_615507665.0Calcium binding2
TgeneCAPN9chr1:231377202chr1:230923268ENST000002719711120518_552506691.0DomainEF-hand 1
TgeneCAPN9chr1:231377202chr1:230923268ENST000002719711120561_594506691.0DomainEF-hand 2
TgeneCAPN9chr1:231377202chr1:230923268ENST000002719711120591_626506691.0DomainEF-hand 3
TgeneCAPN9chr1:231377202chr1:230923268ENST000003545371019518_552480665.0DomainEF-hand 1
TgeneCAPN9chr1:231377202chr1:230923268ENST000003545371019561_594480665.0DomainEF-hand 2
TgeneCAPN9chr1:231377202chr1:230923268ENST000003545371019591_626480665.0DomainEF-hand 3
TgeneCAPN9chr1:231386889chr1:230923268ENST000002719711120518_552506691.0DomainEF-hand 1
TgeneCAPN9chr1:231386889chr1:230923268ENST000002719711120561_594506691.0DomainEF-hand 2
TgeneCAPN9chr1:231386889chr1:230923268ENST000002719711120591_626506691.0DomainEF-hand 3
TgeneCAPN9chr1:231386889chr1:230923268ENST000003545371019518_552480665.0DomainEF-hand 1
TgeneCAPN9chr1:231386889chr1:230923268ENST000003545371019561_594480665.0DomainEF-hand 2
TgeneCAPN9chr1:231386889chr1:230923268ENST000003545371019591_626480665.0DomainEF-hand 3
TgeneCAPN9chr1:231386889chr1:230925878ENST000002719711220561_594533691.0DomainEF-hand 2
TgeneCAPN9chr1:231386889chr1:230925878ENST000002719711220591_626533691.0DomainEF-hand 3
TgeneCAPN9chr1:231386889chr1:230925878ENST000003545371119518_552507665.0DomainEF-hand 1
TgeneCAPN9chr1:231386889chr1:230925878ENST000003545371119561_594507665.0DomainEF-hand 2
TgeneCAPN9chr1:231386889chr1:230925878ENST000003545371119591_626507665.0DomainEF-hand 3
TgeneCAPN9chr1:231377202chr1:230923268ENST000002719711120522_690506691.0RegionNote=Domain IV
TgeneCAPN9chr1:231377202chr1:230923268ENST000003545371019522_690480665.0RegionNote=Domain IV
TgeneCAPN9chr1:231386889chr1:230923268ENST000002719711120522_690506691.0RegionNote=Domain IV
TgeneCAPN9chr1:231386889chr1:230923268ENST000003545371019522_690480665.0RegionNote=Domain IV
TgeneCAPN9chr1:231386889chr1:230925878ENST000003545371119522_690507665.0RegionNote=Domain IV

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneGNPATchr1:231377202chr1:230923268ENST00000366647+116162_16726681.0MotifNote=HXXXXD motif
HgeneGNPATchr1:231377202chr1:230923268ENST00000366647+116678_68026681.0MotifMicrobody targeting signal
HgeneGNPATchr1:231386889chr1:230923268ENST00000366647+216162_16787681.0MotifNote=HXXXXD motif
HgeneGNPATchr1:231386889chr1:230923268ENST00000366647+216678_68087681.0MotifMicrobody targeting signal
HgeneGNPATchr1:231386889chr1:230925878ENST00000366647+216162_16787681.0MotifNote=HXXXXD motif
HgeneGNPATchr1:231386889chr1:230925878ENST00000366647+216678_68087681.0MotifMicrobody targeting signal
TgeneCAPN9chr1:231377202chr1:230923268ENST00000271971112042_337506691.0DomainCalpain catalytic
TgeneCAPN9chr1:231377202chr1:230923268ENST00000354537101942_337480665.0DomainCalpain catalytic
TgeneCAPN9chr1:231386889chr1:230923268ENST00000271971112042_337506691.0DomainCalpain catalytic
TgeneCAPN9chr1:231386889chr1:230923268ENST00000354537101942_337480665.0DomainCalpain catalytic
TgeneCAPN9chr1:231386889chr1:230925878ENST00000271971122042_337533691.0DomainCalpain catalytic
TgeneCAPN9chr1:231386889chr1:230925878ENST000002719711220518_552533691.0DomainEF-hand 1
TgeneCAPN9chr1:231386889chr1:230925878ENST00000354537111942_337507665.0DomainCalpain catalytic
TgeneCAPN9chr1:231377202chr1:230923268ENST000002719711120338_521506691.0RegionNote=Domain III
TgeneCAPN9chr1:231377202chr1:230923268ENST000003545371019338_521480665.0RegionNote=Domain III
TgeneCAPN9chr1:231386889chr1:230923268ENST000002719711120338_521506691.0RegionNote=Domain III
TgeneCAPN9chr1:231386889chr1:230923268ENST000003545371019338_521480665.0RegionNote=Domain III
TgeneCAPN9chr1:231386889chr1:230925878ENST000002719711220338_521533691.0RegionNote=Domain III
TgeneCAPN9chr1:231386889chr1:230925878ENST000002719711220522_690533691.0RegionNote=Domain IV
TgeneCAPN9chr1:231386889chr1:230925878ENST000003545371119338_521507665.0RegionNote=Domain III


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Fusion Gene Sequence for GNPAT-CAPN9


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>33804_33804_1_GNPAT-CAPN9_GNPAT_chr1_231377202_ENST00000366646_CAPN9_chr1_230923268_ENST00000271971_length(transcript)=976nt_BP=245nt
CCGTCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCCGTCCTGAGCG
AAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTCCA
GTTCATCTAACTCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTCGTGCTCCTCTACTCGCCTCCAAAGCCAACTCCACCTGACC
AGGAGACAGAGGAGGAGCAGCGGTTTCGGGCTCTGTTTGAACAAGTCGCTGGTGAGGACATGGAGGTGACAGCAGAGGAACTTGAGTATG
TTTTAAATGCTGTGCTGCAAAAGAAAAAGGACATCAAATTCAAGAAGCTAAGCCTGATCTCCTGTAAAAACATCATTTCCCTGATGGACA
CCAGCGGCAATGGGAAGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTTCCTTCGGTTTGATG
CTGACAAGTCCGGCACCATGTCTACCTATGAACTACGGACTGCACTGAAAGCTGCAGGCTTTCAGCTGAGCAGCCACCTCCTGCAGCTGA
TTGTGCTCAGGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCGGGTGT
TCCAGGCTCTCAGTACAAAGAACAAGGAGTTCATTCATCTCAATATAAATGAGTTCATCCATTTGACAATGAACATCTGAGGCTGCCTTG
TAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCA

>33804_33804_1_GNPAT-CAPN9_GNPAT_chr1_231377202_ENST00000366646_CAPN9_chr1_230923268_ENST00000271971_length(amino acids)=210AA_BP=19
MESSSSSNSYFSVGPTSPSAVVLLYSPPKPTPPDQETEEEQRFRALFEQVAGEDMEVTAEELEYVLNAVLQKKKDIKFKKLSLISCKNII
SLMDTSGNGKLEFDEFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYADEELQLDFDDFLNCLVRLEN

--------------------------------------------------------------
>33804_33804_2_GNPAT-CAPN9_GNPAT_chr1_231377202_ENST00000366646_CAPN9_chr1_230923268_ENST00000354537_length(transcript)=1207nt_BP=245nt
CCGTCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCCGTCCTGAGCG
AAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTCCA
GTTCATCTAACTCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTCGTGCTCCTCTACTCGCCTCCAAAGCCAACTCCACCTGACC
AGGAGACAGAGGAGGAGCAGCGGTTTCGGGCTCTGTTTGAACAAGTCGCTGGTGAGGACATGGAGGTGACAGCAGAGGAACTTGAGTATG
TTTTAAATGCTGTGCTGCAAAAGAAAAAGGACATCAAATTCAAGAAGCTAAGCCTGATCTCCTGTAAAAACATCATTTCCCTGATGGACA
CCAGCGGCAATGGGAAGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTTCCTTCGGTTTGATG
CTGACAAGTCCGGCACCATGTCTACCTATGAACTACGGACTGCACTGAAAGCTGCAGGCTTTCAGCTGAGCAGCCACCTCCTGCAGCTGA
TTGTGCTCAGGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCGGGTGT
TCCAGGCTCTCAGTACAAAGAACAAGGAGTTCATTCATCTCAATATAAATGAGTTCATCCATTTGACAATGAACATCTGAGGCTGCCTTG
TAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCA
CTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGAACTCAGCTACACTCTCTGATTTTGTGCTACTCC
TTTGTAAAGTCACTGCCTTAAGGGGGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCCCACACTCTACTT
TCCTTATTTCCTTCCATTAAGAATTACTCAGAGTTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACATCC

>33804_33804_2_GNPAT-CAPN9_GNPAT_chr1_231377202_ENST00000366646_CAPN9_chr1_230923268_ENST00000354537_length(amino acids)=210AA_BP=19
MESSSSSNSYFSVGPTSPSAVVLLYSPPKPTPPDQETEEEQRFRALFEQVAGEDMEVTAEELEYVLNAVLQKKKDIKFKKLSLISCKNII
SLMDTSGNGKLEFDEFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYADEELQLDFDDFLNCLVRLEN

--------------------------------------------------------------
>33804_33804_3_GNPAT-CAPN9_GNPAT_chr1_231377202_ENST00000366646_CAPN9_chr1_230923268_ENST00000366666_length(transcript)=975nt_BP=245nt
CCGTCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCCGTCCTGAGCG
AAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTCCA
GTTCATCTAACTCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTCGTGCTCCTCTACTCGCCTCCAAAGCCAACTCCACCTGACC
AGGAGACAGAGGAGGAGCAGCGGTTTCGGGCTCTGTTTGAACAAGTCGCTGGTGAGGACATGGAGGTGACAGCAGAGGAACTTGAGTATG
TTTTAAATGCTGTGCTGCAAAAGAAAAAGGACATCAAATTCAAGAAGCTAAGCCTGATCTCCTGTAAAAACATCATTTCCCTGATGGACA
CCAGCGGCAATGGGAAGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTTCCTTCGGTTTGATG
CTGACAAGTCCGGCACCATGTCTACCTATGAACTACGGACTGCACTGAAAGCTGCAGGCTTTCAGCTGAGCAGCCACCTCCTGCAGCTGA
TTGTGCTCAGGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCGGGTGT
TCCAGGCTCTCAGTACAAAGAACAAGGAGTTCATTCATCTCAATATAAATGAGTTCATCCATTTGACAATGAACATCTGAGGCTGCCTTG
TAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTTCA

>33804_33804_3_GNPAT-CAPN9_GNPAT_chr1_231377202_ENST00000366646_CAPN9_chr1_230923268_ENST00000366666_length(amino acids)=210AA_BP=19
MESSSSSNSYFSVGPTSPSAVVLLYSPPKPTPPDQETEEEQRFRALFEQVAGEDMEVTAEELEYVLNAVLQKKKDIKFKKLSLISCKNII
SLMDTSGNGKLEFDEFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYADEELQLDFDDFLNCLVRLEN

--------------------------------------------------------------
>33804_33804_4_GNPAT-CAPN9_GNPAT_chr1_231377202_ENST00000366647_CAPN9_chr1_230923268_ENST00000271971_length(transcript)=978nt_BP=247nt
TTCCGTCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCCGTCCTGAG
CGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTC
CAGTTCATCTAACTCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTCGTGCTCCTCTACTCGCCTCCAAAGCCAACTCCACCTGA
CCAGGAGACAGAGGAGGAGCAGCGGTTTCGGGCTCTGTTTGAACAAGTCGCTGGTGAGGACATGGAGGTGACAGCAGAGGAACTTGAGTA
TGTTTTAAATGCTGTGCTGCAAAAGAAAAAGGACATCAAATTCAAGAAGCTAAGCCTGATCTCCTGTAAAAACATCATTTCCCTGATGGA
CACCAGCGGCAATGGGAAGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTTCCTTCGGTTTGA
TGCTGACAAGTCCGGCACCATGTCTACCTATGAACTACGGACTGCACTGAAAGCTGCAGGCTTTCAGCTGAGCAGCCACCTCCTGCAGCT
GATTGTGCTCAGGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCGGGT
GTTCCAGGCTCTCAGTACAAAGAACAAGGAGTTCATTCATCTCAATATAAATGAGTTCATCCATTTGACAATGAACATCTGAGGCTGCCT
TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT

>33804_33804_4_GNPAT-CAPN9_GNPAT_chr1_231377202_ENST00000366647_CAPN9_chr1_230923268_ENST00000271971_length(amino acids)=210AA_BP=19
MESSSSSNSYFSVGPTSPSAVVLLYSPPKPTPPDQETEEEQRFRALFEQVAGEDMEVTAEELEYVLNAVLQKKKDIKFKKLSLISCKNII
SLMDTSGNGKLEFDEFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYADEELQLDFDDFLNCLVRLEN

--------------------------------------------------------------
>33804_33804_5_GNPAT-CAPN9_GNPAT_chr1_231377202_ENST00000366647_CAPN9_chr1_230923268_ENST00000354537_length(transcript)=1209nt_BP=247nt
TTCCGTCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCCGTCCTGAG
CGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTC
CAGTTCATCTAACTCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTCGTGCTCCTCTACTCGCCTCCAAAGCCAACTCCACCTGA
CCAGGAGACAGAGGAGGAGCAGCGGTTTCGGGCTCTGTTTGAACAAGTCGCTGGTGAGGACATGGAGGTGACAGCAGAGGAACTTGAGTA
TGTTTTAAATGCTGTGCTGCAAAAGAAAAAGGACATCAAATTCAAGAAGCTAAGCCTGATCTCCTGTAAAAACATCATTTCCCTGATGGA
CACCAGCGGCAATGGGAAGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTTCCTTCGGTTTGA
TGCTGACAAGTCCGGCACCATGTCTACCTATGAACTACGGACTGCACTGAAAGCTGCAGGCTTTCAGCTGAGCAGCCACCTCCTGCAGCT
GATTGTGCTCAGGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCGGGT
GTTCCAGGCTCTCAGTACAAAGAACAAGGAGTTCATTCATCTCAATATAAATGAGTTCATCCATTTGACAATGAACATCTGAGGCTGCCT
TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT
CACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGAACTCAGCTACACTCTCTGATTTTGTGCTACT
CCTTTGTAAAGTCACTGCCTTAAGGGGGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCCCACACTCTAC
TTTCCTTATTTCCTTCCATTAAGAATTACTCAGAGTTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGACAT

>33804_33804_5_GNPAT-CAPN9_GNPAT_chr1_231377202_ENST00000366647_CAPN9_chr1_230923268_ENST00000354537_length(amino acids)=210AA_BP=19
MESSSSSNSYFSVGPTSPSAVVLLYSPPKPTPPDQETEEEQRFRALFEQVAGEDMEVTAEELEYVLNAVLQKKKDIKFKKLSLISCKNII
SLMDTSGNGKLEFDEFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYADEELQLDFDDFLNCLVRLEN

--------------------------------------------------------------
>33804_33804_6_GNPAT-CAPN9_GNPAT_chr1_231377202_ENST00000366647_CAPN9_chr1_230923268_ENST00000366666_length(transcript)=977nt_BP=247nt
TTCCGTCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCCGTCCTGAG
CGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTC
CAGTTCATCTAACTCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTCGTGCTCCTCTACTCGCCTCCAAAGCCAACTCCACCTGA
CCAGGAGACAGAGGAGGAGCAGCGGTTTCGGGCTCTGTTTGAACAAGTCGCTGGTGAGGACATGGAGGTGACAGCAGAGGAACTTGAGTA
TGTTTTAAATGCTGTGCTGCAAAAGAAAAAGGACATCAAATTCAAGAAGCTAAGCCTGATCTCCTGTAAAAACATCATTTCCCTGATGGA
CACCAGCGGCAATGGGAAGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTTCCTTCGGTTTGA
TGCTGACAAGTCCGGCACCATGTCTACCTATGAACTACGGACTGCACTGAAAGCTGCAGGCTTTCAGCTGAGCAGCCACCTCCTGCAGCT
GATTGTGCTCAGGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCGGGT
GTTCCAGGCTCTCAGTACAAAGAACAAGGAGTTCATTCATCTCAATATAAATGAGTTCATCCATTTGACAATGAACATCTGAGGCTGCCT
TGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGGGTT

>33804_33804_6_GNPAT-CAPN9_GNPAT_chr1_231377202_ENST00000366647_CAPN9_chr1_230923268_ENST00000366666_length(amino acids)=210AA_BP=19
MESSSSSNSYFSVGPTSPSAVVLLYSPPKPTPPDQETEEEQRFRALFEQVAGEDMEVTAEELEYVLNAVLQKKKDIKFKKLSLISCKNII
SLMDTSGNGKLEFDEFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYADEELQLDFDDFLNCLVRLEN

--------------------------------------------------------------
>33804_33804_7_GNPAT-CAPN9_GNPAT_chr1_231386889_ENST00000366647_CAPN9_chr1_230923268_ENST00000271971_length(transcript)=1161nt_BP=430nt
TTCCGTCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCCGTCCTGAG
CGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTC
CAGTTCATCTAACTCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTCGTGCTCCTCTACTCGAAGGAGCTCAAAAAGTGGGATGA
GTTTGAAGATATTTTAGAAGAGAGGAGGCATGTCAGTGACTTGAAATTTGCAATGAAATGCTACACACCTCTTGTCTATAAGGGAATTAC
TCCATGTAAACCAATTGATATTAAATGTAGTGTTCTCAATTCTGAGGAGATTCATTATGTCATTAAACAGCCTCCAAAGCCAACTCCACC
TGACCAGGAGACAGAGGAGGAGCAGCGGTTTCGGGCTCTGTTTGAACAAGTCGCTGGTGAGGACATGGAGGTGACAGCAGAGGAACTTGA
GTATGTTTTAAATGCTGTGCTGCAAAAGAAAAAGGACATCAAATTCAAGAAGCTAAGCCTGATCTCCTGTAAAAACATCATTTCCCTGAT
GGACACCAGCGGCAATGGGAAGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTTCCTTCGGTT
TGATGCTGACAAGTCCGGCACCATGTCTACCTATGAACTACGGACTGCACTGAAAGCTGCAGGCTTTCAGCTGAGCAGCCACCTCCTGCA
GCTGATTGTGCTCAGGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCG
GGTGTTCCAGGCTCTCAGTACAAAGAACAAGGAGTTCATTCATCTCAATATAAATGAGTTCATCCATTTGACAATGAACATCTGAGGCTG
CCTTGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGG

>33804_33804_7_GNPAT-CAPN9_GNPAT_chr1_231386889_ENST00000366647_CAPN9_chr1_230923268_ENST00000271971_length(amino acids)=271AA_BP=87
MESSSSSNSYFSVGPTSPSAVVLLYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHYVIKQPPK
PTPPDQETEEEQRFRALFEQVAGEDMEVTAEELEYVLNAVLQKKKDIKFKKLSLISCKNIISLMDTSGNGKLEFDEFKVFWDKLKQWINL
FLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYADEELQLDFDDFLNCLVRLENASRVFQALSTKNKEFIHLNINEFIHLTMN

--------------------------------------------------------------
>33804_33804_8_GNPAT-CAPN9_GNPAT_chr1_231386889_ENST00000366647_CAPN9_chr1_230923268_ENST00000354537_length(transcript)=1392nt_BP=430nt
TTCCGTCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCCGTCCTGAG
CGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTC
CAGTTCATCTAACTCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTCGTGCTCCTCTACTCGAAGGAGCTCAAAAAGTGGGATGA
GTTTGAAGATATTTTAGAAGAGAGGAGGCATGTCAGTGACTTGAAATTTGCAATGAAATGCTACACACCTCTTGTCTATAAGGGAATTAC
TCCATGTAAACCAATTGATATTAAATGTAGTGTTCTCAATTCTGAGGAGATTCATTATGTCATTAAACAGCCTCCAAAGCCAACTCCACC
TGACCAGGAGACAGAGGAGGAGCAGCGGTTTCGGGCTCTGTTTGAACAAGTCGCTGGTGAGGACATGGAGGTGACAGCAGAGGAACTTGA
GTATGTTTTAAATGCTGTGCTGCAAAAGAAAAAGGACATCAAATTCAAGAAGCTAAGCCTGATCTCCTGTAAAAACATCATTTCCCTGAT
GGACACCAGCGGCAATGGGAAGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTTCCTTCGGTT
TGATGCTGACAAGTCCGGCACCATGTCTACCTATGAACTACGGACTGCACTGAAAGCTGCAGGCTTTCAGCTGAGCAGCCACCTCCTGCA
GCTGATTGTGCTCAGGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCG
GGTGTTCCAGGCTCTCAGTACAAAGAACAAGGAGTTCATTCATCTCAATATAAATGAGTTCATCCATTTGACAATGAACATCTGAGGCTG
CCTTGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGG
GTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGAACTCAGCTACACTCTCTGATTTTGTGCT
ACTCCTTTGTAAAGTCACTGCCTTAAGGGGGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTTCCCACACTC
TACTTTCCTTATTTCCTTCCATTAAGAATTACTCAGAGTTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATTGTGATCAGA

>33804_33804_8_GNPAT-CAPN9_GNPAT_chr1_231386889_ENST00000366647_CAPN9_chr1_230923268_ENST00000354537_length(amino acids)=271AA_BP=87
MESSSSSNSYFSVGPTSPSAVVLLYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHYVIKQPPK
PTPPDQETEEEQRFRALFEQVAGEDMEVTAEELEYVLNAVLQKKKDIKFKKLSLISCKNIISLMDTSGNGKLEFDEFKVFWDKLKQWINL
FLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYADEELQLDFDDFLNCLVRLENASRVFQALSTKNKEFIHLNINEFIHLTMN

--------------------------------------------------------------
>33804_33804_9_GNPAT-CAPN9_GNPAT_chr1_231386889_ENST00000366647_CAPN9_chr1_230923268_ENST00000366666_length(transcript)=1160nt_BP=430nt
TTCCGTCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCCGTCCTGAG
CGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTC
CAGTTCATCTAACTCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTCGTGCTCCTCTACTCGAAGGAGCTCAAAAAGTGGGATGA
GTTTGAAGATATTTTAGAAGAGAGGAGGCATGTCAGTGACTTGAAATTTGCAATGAAATGCTACACACCTCTTGTCTATAAGGGAATTAC
TCCATGTAAACCAATTGATATTAAATGTAGTGTTCTCAATTCTGAGGAGATTCATTATGTCATTAAACAGCCTCCAAAGCCAACTCCACC
TGACCAGGAGACAGAGGAGGAGCAGCGGTTTCGGGCTCTGTTTGAACAAGTCGCTGGTGAGGACATGGAGGTGACAGCAGAGGAACTTGA
GTATGTTTTAAATGCTGTGCTGCAAAAGAAAAAGGACATCAAATTCAAGAAGCTAAGCCTGATCTCCTGTAAAAACATCATTTCCCTGAT
GGACACCAGCGGCAATGGGAAGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTTCCTTCGGTT
TGATGCTGACAAGTCCGGCACCATGTCTACCTATGAACTACGGACTGCACTGAAAGCTGCAGGCTTTCAGCTGAGCAGCCACCTCCTGCA
GCTGATTGTGCTCAGGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAATGCGAGCCG
GGTGTTCCAGGCTCTCAGTACAAAGAACAAGGAGTTCATTCATCTCAATATAAATGAGTTCATCCATTTGACAATGAACATCTGAGGCTG
CCTTGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATTACGCCCAGG

>33804_33804_9_GNPAT-CAPN9_GNPAT_chr1_231386889_ENST00000366647_CAPN9_chr1_230923268_ENST00000366666_length(amino acids)=271AA_BP=87
MESSSSSNSYFSVGPTSPSAVVLLYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHYVIKQPPK
PTPPDQETEEEQRFRALFEQVAGEDMEVTAEELEYVLNAVLQKKKDIKFKKLSLISCKNIISLMDTSGNGKLEFDEFKVFWDKLKQWINL
FLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYADEELQLDFDDFLNCLVRLENASRVFQALSTKNKEFIHLNINEFIHLTMN

--------------------------------------------------------------
>33804_33804_10_GNPAT-CAPN9_GNPAT_chr1_231386889_ENST00000366647_CAPN9_chr1_230925878_ENST00000271971_length(transcript)=1080nt_BP=430nt
TTCCGTCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCCGTCCTGAG
CGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTC
CAGTTCATCTAACTCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTCGTGCTCCTCTACTCGAAGGAGCTCAAAAAGTGGGATGA
GTTTGAAGATATTTTAGAAGAGAGGAGGCATGTCAGTGACTTGAAATTTGCAATGAAATGCTACACACCTCTTGTCTATAAGGGAATTAC
TCCATGTAAACCAATTGATATTAAATGTAGTGTTCTCAATTCTGAGGAGATTCATTATGTCATTAAACAGGACATGGAGGTGACAGCAGA
GGAACTTGAGTATGTTTTAAATGCTGTGCTGCAAAAGAAAAAGGACATCAAATTCAAGAAGCTAAGCCTGATCTCCTGTAAAAACATCAT
TTCCCTGATGGACACCAGCGGCAATGGGAAGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTT
CCTTCGGTTTGATGCTGACAAGTCCGGCACCATGTCTACCTATGAACTACGGACTGCACTGAAAGCTGCAGGCTTTCAGCTGAGCAGCCA
CCTCCTGCAGCTGATTGTGCTCAGGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAA
TGCGAGCCGGGTGTTCCAGGCTCTCAGTACAAAGAACAAGGAGTTCATTCATCTCAATATAAATGAGTTCATCCATTTGACAATGAACAT
CTGAGGCTGCCTTGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATT
ACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGAACTCAGCTACACTCTCTGA

>33804_33804_10_GNPAT-CAPN9_GNPAT_chr1_231386889_ENST00000366647_CAPN9_chr1_230925878_ENST00000271971_length(amino acids)=244AA_BP=86
MESSSSSNSYFSVGPTSPSAVVLLYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHYVIKQDME
VTAEELEYVLNAVLQKKKDIKFKKLSLISCKNIISLMDTSGNGKLEFDEFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQ

--------------------------------------------------------------
>33804_33804_11_GNPAT-CAPN9_GNPAT_chr1_231386889_ENST00000366647_CAPN9_chr1_230925878_ENST00000354537_length(transcript)=1311nt_BP=430nt
TTCCGTCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCCGTCCTGAG
CGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTC
CAGTTCATCTAACTCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTCGTGCTCCTCTACTCGAAGGAGCTCAAAAAGTGGGATGA
GTTTGAAGATATTTTAGAAGAGAGGAGGCATGTCAGTGACTTGAAATTTGCAATGAAATGCTACACACCTCTTGTCTATAAGGGAATTAC
TCCATGTAAACCAATTGATATTAAATGTAGTGTTCTCAATTCTGAGGAGATTCATTATGTCATTAAACAGGACATGGAGGTGACAGCAGA
GGAACTTGAGTATGTTTTAAATGCTGTGCTGCAAAAGAAAAAGGACATCAAATTCAAGAAGCTAAGCCTGATCTCCTGTAAAAACATCAT
TTCCCTGATGGACACCAGCGGCAATGGGAAGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTT
CCTTCGGTTTGATGCTGACAAGTCCGGCACCATGTCTACCTATGAACTACGGACTGCACTGAAAGCTGCAGGCTTTCAGCTGAGCAGCCA
CCTCCTGCAGCTGATTGTGCTCAGGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAA
TGCGAGCCGGGTGTTCCAGGCTCTCAGTACAAAGAACAAGGAGTTCATTCATCTCAATATAAATGAGTTCATCCATTTGACAATGAACAT
CTGAGGCTGCCTTGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATT
ACGCCCAGGGTTCACTCCCCTCTCATCGTCCGGCCTTCTCCCTTCATCTTGATCTGGGAAGAATGAAATGAACTCAGCTACACTCTCTGA
TTTTGTGCTACTCCTTTGTAAAGTCACTGCCTTAAGGGGGCTGATGGCGCCACCTGTGCCTTACATCCAGGTTCAGGCATCACTAGCTTT
CCCACACTCTACTTTCCTTATTTCCTTCCATTAAGAATTACTCAGAGTTCTAACGCACAGAATCCTGACTTCCATGTAGCTCCAGTCATT

>33804_33804_11_GNPAT-CAPN9_GNPAT_chr1_231386889_ENST00000366647_CAPN9_chr1_230925878_ENST00000354537_length(amino acids)=244AA_BP=86
MESSSSSNSYFSVGPTSPSAVVLLYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHYVIKQDME
VTAEELEYVLNAVLQKKKDIKFKKLSLISCKNIISLMDTSGNGKLEFDEFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQ

--------------------------------------------------------------
>33804_33804_12_GNPAT-CAPN9_GNPAT_chr1_231386889_ENST00000366647_CAPN9_chr1_230925878_ENST00000366666_length(transcript)=1079nt_BP=430nt
TTCCGTCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCCGTCCTGAG
CGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTC
CAGTTCATCTAACTCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTCGTGCTCCTCTACTCGAAGGAGCTCAAAAAGTGGGATGA
GTTTGAAGATATTTTAGAAGAGAGGAGGCATGTCAGTGACTTGAAATTTGCAATGAAATGCTACACACCTCTTGTCTATAAGGGAATTAC
TCCATGTAAACCAATTGATATTAAATGTAGTGTTCTCAATTCTGAGGAGATTCATTATGTCATTAAACAGGACATGGAGGTGACAGCAGA
GGAACTTGAGTATGTTTTAAATGCTGTGCTGCAAAAGAAAAAGGACATCAAATTCAAGAAGCTAAGCCTGATCTCCTGTAAAAACATCAT
TTCCCTGATGGACACCAGCGGCAATGGGAAGCTGGAGTTTGATGAATTCAAAGTGTTCTGGGACAAGCTGAAGCAGTGGATTAACCTTTT
CCTTCGGTTTGATGCTGACAAGTCCGGCACCATGTCTACCTATGAACTACGGACTGCACTGAAAGCTGCAGGCTTTCAGCTGAGCAGCCA
CCTCCTGCAGCTGATTGTGCTCAGGTATGCGGATGAGGAGCTCCAGCTGGACTTCGATGACTTCCTCAACTGCCTGGTCCGGCTGGAGAA
TGCGAGCCGGGTGTTCCAGGCTCTCAGTACAAAGAACAAGGAGTTCATTCATCTCAATATAAATGAGTTCATCCATTTGACAATGAACAT
CTGAGGCTGCCTTGTAGAGATGCAGCCTGCCCAGCTGAATCTTGGCTTCTGGACCTTGACCTTCAGAACTTCTCTTGGTGTGGAACCATT

>33804_33804_12_GNPAT-CAPN9_GNPAT_chr1_231386889_ENST00000366647_CAPN9_chr1_230925878_ENST00000366666_length(amino acids)=244AA_BP=86
MESSSSSNSYFSVGPTSPSAVVLLYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHYVIKQDME
VTAEELEYVLNAVLQKKKDIKFKKLSLISCKNIISLMDTSGNGKLEFDEFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQ

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Fusion Gene PPI Analysis for GNPAT-CAPN9


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for GNPAT-CAPN9


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for GNPAT-CAPN9


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource