|
Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:HEYL-COL9A2 (FusionGDB2 ID:36229) |
Fusion Gene Summary for HEYL-COL9A2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: HEYL-COL9A2 | Fusion gene ID: 36229 | Hgene | Tgene | Gene symbol | HEYL | COL9A2 | Gene ID | 26508 | 1298 |
Gene name | hes related family bHLH transcription factor with YRPW motif like | collagen type IX alpha 2 chain | |
Synonyms | HESR3|HEY3|HRT3|bHLHb33 | DJ39G22.4|EDM2|MED|STL5 | |
Cytomap | 1p34.2 | 1p34.2 | |
Type of gene | protein-coding | protein-coding | |
Description | hairy/enhancer-of-split related with YRPW motif-like proteinHEY-like proteinHRT-3class B basic helix-loop-helix protein 33hHRT3hHeyLhairy-related transcription factor 3hairy/enhancer-of-split related with YRPW motif 3 | collagen alpha-2(IX) chainalpha 2 type IX collagencollagen IX, alpha-2 polypeptidecollagen, type IX, alpha 2 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q9NQ87 | Q14055 | |
Ensembl transtripts involved in fusion gene | ENST00000372852, ENST00000535435, | ENST00000466267, ENST00000372748, | |
Fusion gene scores | * DoF score | 3 X 4 X 2=24 | 2 X 2 X 2=8 |
# samples | 4 | 3 | |
** MAII score | log2(4/24*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(3/8*10)=1.90689059560852 | |
Context | PubMed: HEYL [Title/Abstract] AND COL9A2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | HEYL(40105218)-COL9A2(40777387), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | HEYL | GO:0007219 | Notch signaling pathway | 10964718 |
Hgene | HEYL | GO:0043433 | negative regulation of DNA-binding transcription factor activity | 21454491 |
Hgene | HEYL | GO:0045892 | negative regulation of transcription, DNA-templated | 15485867|21454491 |
Hgene | HEYL | GO:0045944 | positive regulation of transcription by RNA polymerase II | 21290414 |
Hgene | HEYL | GO:0060766 | negative regulation of androgen receptor signaling pathway | 21454491 |
Fusion gene breakpoints across HEYL (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across COL9A2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-E2-A15E-01A | HEYL | chr1 | 40105218 | - | COL9A2 | chr1 | 40777387 | - |
ChimerDB4 | BRCA | TCGA-E2-A15E-06A | HEYL | chr1 | 40105218 | - | COL9A2 | chr1 | 40777387 | - |
ChimerDB4 | BRCA | TCGA-E2-A15E | HEYL | chr1 | 40105217 | - | COL9A2 | chr1 | 40777387 | - |
Top |
Fusion Gene ORF analysis for HEYL-COL9A2 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000372852 | ENST00000466267 | HEYL | chr1 | 40105218 | - | COL9A2 | chr1 | 40777387 | - |
5CDS-intron | ENST00000372852 | ENST00000466267 | HEYL | chr1 | 40105217 | - | COL9A2 | chr1 | 40777387 | - |
In-frame | ENST00000372852 | ENST00000372748 | HEYL | chr1 | 40105218 | - | COL9A2 | chr1 | 40777387 | - |
In-frame | ENST00000372852 | ENST00000372748 | HEYL | chr1 | 40105217 | - | COL9A2 | chr1 | 40777387 | - |
intron-3CDS | ENST00000535435 | ENST00000372748 | HEYL | chr1 | 40105218 | - | COL9A2 | chr1 | 40777387 | - |
intron-3CDS | ENST00000535435 | ENST00000372748 | HEYL | chr1 | 40105217 | - | COL9A2 | chr1 | 40777387 | - |
intron-intron | ENST00000535435 | ENST00000466267 | HEYL | chr1 | 40105218 | - | COL9A2 | chr1 | 40777387 | - |
intron-intron | ENST00000535435 | ENST00000466267 | HEYL | chr1 | 40105217 | - | COL9A2 | chr1 | 40777387 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000372852 | HEYL | chr1 | 40105217 | - | ENST00000372748 | COL9A2 | chr1 | 40777387 | - | 2748 | 400 | 478 | 2052 | 524 |
ENST00000372852 | HEYL | chr1 | 40105218 | - | ENST00000372748 | COL9A2 | chr1 | 40777387 | - | 2748 | 400 | 478 | 2052 | 524 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000372852 | ENST00000372748 | HEYL | chr1 | 40105217 | - | COL9A2 | chr1 | 40777387 | - | 0.03508401 | 0.964916 |
ENST00000372852 | ENST00000372748 | HEYL | chr1 | 40105218 | - | COL9A2 | chr1 | 40777387 | - | 0.03508401 | 0.964916 |
Top |
Fusion Genomic Features for HEYL-COL9A2 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for HEYL-COL9A2 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:40105218/chr1:40777387) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
HEYL | COL9A2 |
FUNCTION: Downstream effector of Notch signaling which may be required for cardiovascular development (By similarity). Transcriptional repressor which binds preferentially to the canonical E box sequence 5'-CACGTG-3' (By similarity). Represses transcription by the cardiac transcriptional activators GATA4 and GATA6. {ECO:0000250, ECO:0000269|PubMed:15485867}. | FUNCTION: Structural component of hyaline cartilage and vitreous of the eye. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | COL9A2 | chr1:40105217 | chr1:40777387 | ENST00000372748 | 7 | 32 | 164_180 | 139 | 690.0 | Region | Note=Nonhelical region 4 (NC4) | |
Tgene | COL9A2 | chr1:40105217 | chr1:40777387 | ENST00000372748 | 7 | 32 | 181_519 | 139 | 690.0 | Region | Note=Triple-helical region 3 (COL3) | |
Tgene | COL9A2 | chr1:40105217 | chr1:40777387 | ENST00000372748 | 7 | 32 | 520_549 | 139 | 690.0 | Region | Note=Nonhelical region 3 (NC3) | |
Tgene | COL9A2 | chr1:40105217 | chr1:40777387 | ENST00000372748 | 7 | 32 | 550_632 | 139 | 690.0 | Region | Note=Triple-helical region 2 (COL2) | |
Tgene | COL9A2 | chr1:40105217 | chr1:40777387 | ENST00000372748 | 7 | 32 | 633_634 | 139 | 690.0 | Region | Note=Nonhelical region 2 (NC2) | |
Tgene | COL9A2 | chr1:40105217 | chr1:40777387 | ENST00000372748 | 7 | 32 | 635_664 | 139 | 690.0 | Region | Note=Triple-helical region 1 (COL1) | |
Tgene | COL9A2 | chr1:40105217 | chr1:40777387 | ENST00000372748 | 7 | 32 | 665_689 | 139 | 690.0 | Region | Note=Nonhelical region 1 (NC1) | |
Tgene | COL9A2 | chr1:40105218 | chr1:40777387 | ENST00000372748 | 7 | 32 | 164_180 | 139 | 690.0 | Region | Note=Nonhelical region 4 (NC4) | |
Tgene | COL9A2 | chr1:40105218 | chr1:40777387 | ENST00000372748 | 7 | 32 | 181_519 | 139 | 690.0 | Region | Note=Triple-helical region 3 (COL3) | |
Tgene | COL9A2 | chr1:40105218 | chr1:40777387 | ENST00000372748 | 7 | 32 | 520_549 | 139 | 690.0 | Region | Note=Nonhelical region 3 (NC3) | |
Tgene | COL9A2 | chr1:40105218 | chr1:40777387 | ENST00000372748 | 7 | 32 | 550_632 | 139 | 690.0 | Region | Note=Triple-helical region 2 (COL2) | |
Tgene | COL9A2 | chr1:40105218 | chr1:40777387 | ENST00000372748 | 7 | 32 | 633_634 | 139 | 690.0 | Region | Note=Nonhelical region 2 (NC2) | |
Tgene | COL9A2 | chr1:40105218 | chr1:40777387 | ENST00000372748 | 7 | 32 | 635_664 | 139 | 690.0 | Region | Note=Triple-helical region 1 (COL1) | |
Tgene | COL9A2 | chr1:40105218 | chr1:40777387 | ENST00000372748 | 7 | 32 | 665_689 | 139 | 690.0 | Region | Note=Nonhelical region 1 (NC1) |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | HEYL | chr1:40105217 | chr1:40777387 | ENST00000372852 | - | 1 | 5 | 162_309 | 26 | 329.0 | Compositional bias | Note=Pro-rich |
Hgene | HEYL | chr1:40105218 | chr1:40777387 | ENST00000372852 | - | 1 | 5 | 162_309 | 26 | 329.0 | Compositional bias | Note=Pro-rich |
Hgene | HEYL | chr1:40105217 | chr1:40777387 | ENST00000372852 | - | 1 | 5 | 116_153 | 26 | 329.0 | Domain | Orange |
Hgene | HEYL | chr1:40105217 | chr1:40777387 | ENST00000372852 | - | 1 | 5 | 43_98 | 26 | 329.0 | Domain | bHLH |
Hgene | HEYL | chr1:40105218 | chr1:40777387 | ENST00000372852 | - | 1 | 5 | 116_153 | 26 | 329.0 | Domain | Orange |
Hgene | HEYL | chr1:40105218 | chr1:40777387 | ENST00000372852 | - | 1 | 5 | 43_98 | 26 | 329.0 | Domain | bHLH |
Tgene | COL9A2 | chr1:40105217 | chr1:40777387 | ENST00000372748 | 7 | 32 | 27_163 | 139 | 690.0 | Region | Note=Triple-helical region 4 (COL4) | |
Tgene | COL9A2 | chr1:40105218 | chr1:40777387 | ENST00000372748 | 7 | 32 | 27_163 | 139 | 690.0 | Region | Note=Triple-helical region 4 (COL4) |
Top |
Fusion Gene Sequence for HEYL-COL9A2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>36229_36229_1_HEYL-COL9A2_HEYL_chr1_40105217_ENST00000372852_COL9A2_chr1_40777387_ENST00000372748_length(transcript)=2748nt_BP=400nt CTCCTGGCTTCCCCGCGGGGCCTCCCAGGGCACCTGCCCAAGGCCACCCAGCGCGCGGCAGCCGAGACAGCGGAGCAGAGCCGGACCTCC CAGCCGTCGATGAAGGCGGCGACCGCCTAGGGCCTTCCCACGGCTCGGCGGCGCGTCACCGCGGGGGCGAGGGGGCGCCTGGGCGCCCGG AGCTGCGGCGCAGGAAAGGGCCCTGGGAAAGGGCGGTGGCGGCGCCCCCGAGGCGGGGCCGGGGCGGGGCCGGGGCGGGGCCTGACTTCC CGACTGGGAGCCTTAGCCGCGGGGCTGAGACCAGGCAGCCTGCGTTCGCCATGAAGCGACCCAAGGAGCCGAGCGGCTCCGACGGGGAGT CCGACGGACCCATCGACGTGGGCCAAGAGGGCCAGCTGAGGGGGACCCTGGACCAGATGGACCATCGGGGCCCCCAGGACCCCCTGGGAA ACCTGGTCGCCCGGGAACCATCCAGGGTCTGGAAGGCAGTGCGGATTTCCTGTGTCCAACCAACTGTCCACCCGGAATGAAAGGTCCCCC AGGGCTGCAGGGAGTGAAGGGGCATGCGGGCAAACGCGGGATTCTGGGTGATCCTGGCCACCAGGGGAAGCCGGGTCCCAAGGGAGATGT GGGTGCCTCTGGAGAGCAAGGCATCCCTGGACCACCGGGTCCCCAGGGCATCAGGGGCTACCCAGGCATGGCAGGGCCCAAGGGAGAGAC GGGCCCTCATGGATATAAAGGCATGGTGGGCGCTATCGGTGCCACTGGGCCACCGGGTGAGGAAGGTCCTAGGGGACCGCCAGGCCGAGC TGGGGAGAAGGGTGACGAGGGCAGCCCAGGTATTCGTGGACCCCAGGGGATCACAGGCCCGAAAGGAGCAACGGGCCCCCCAGGCATCAA CGGCAAGGATGGGACCCCAGGCACGCCTGGCATGAAGGGCAGTGCAGGACAGGCGGGACAGCCCGGAAGTCCAGGCCACCAGGGCCTAGC GGGTGTGCCAGGCCAGCCTGGGACAAAAGGAGGCCCTGGAGACCAGGGTGAGCCGGGCCCGCAGGGCCTTCCTGGATTCTCTGGTCCCCC TGGGAAAGAGGGAGAGCCAGGGCCTCGAGGAGAAATTGGTCCCCAGGGCATCATGGGACAGAAGGGTGACCAAGGCGAGAGGGGTCCAGT GGGGCAACCAGGCCCTCAGGGAAGGCAGGGCCCTAAGGGGGAGCAGGGCCCCCCCGGAATTCCAGGGCCCCAAGGCTTGCCAGGCGTCAA AGGAGACAAGGGCTCCCCAGGGAAGACCGGGCCCCGCGGCAAAGTGGGTGACCCAGGGGTGGCCGGCCTCCCCGGAGAGAAAGGCGAGAA GGGCGAGTCCGGCGAGCCGGGGCCCAAGGGACAGCAAGGAGTACGTGGAGAACCCGGCTACCCTGGCCCCAGCGGGGATGCGGGCGCCCC AGGGGTTCAGGGCTACCCTGGTCCCCCCGGCCCTCGAGGACTGGCCGGGAACCGAGGCGTGCCAGGACAGCCCGGGAGACAGGGCGTGGA GGGCCGGGATGCCACTGACCAGCACATCGTGGATGTGGCGCTGAAGATGCTGCAAGAGCAACTGGCAGAGGTCGCCGTGAGTGCCAAGCG GGAAGCCCTGGGTGCGGTGGGCATGATGGGTCCTCCAGGACCTCCTGGGCCCCCTGGGTACCCAGGCAAGCAGGGCCCCCATGGGCACCC TGGCCCTCGGGGCGTTCCTGGCATCGTGGGAGCCGTGGGTCAGATCGGCAACACGGGGCCCAAGGGAAAACGTGGAGAGAAGGGTGATCC AGGAGAAGTGGGACGGGGGCACCCCGGGATGCCTGGGCCCCCAGGGATCCCAGGACTCCCTGGCCGGCCTGGCCAGGCAATCAACGGCAA GGATGGAGATCGAGGGTCCCCAGGGGCTCCAGGAGAGGCAGGTCGACCTGGCCTGCCAGGCCCCGTGGGGCTGCCGGGCTTCTGTGAACC TGCCGCCTGCCTTGGAGCTTCGGCCTATGCCTCTGCCCGCCTTACAGAGCCTGGATCCATCAAGGGGCCTTGAGCATCAGGCCCAGACAG AGCCTGGCAGGCATCCTGGCGGGAAGGACCAGGTCCCCTCTGGGTGGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGAC CTTCTGTCTGGGACTCAGGAGTCCTAAGGAAAAGGAATTCTAAAACATGGGGGAAGGGGAGGTAGAGCACTGATGGGTGAAAAAGTGAGG CCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCCTTCCAGCGAGCATCATTCGGCTGTTACC AAAACAAACATCTTAATCTGCACCTTTCTCCACTGGCCATCTTGTCCTTGGGTCAGTGGGACATGGGCACCTCGGGAGGCCCGGGCCCTG CCCAGCTACAGTTCCACCCCTCAGCTTGAGGACCAATGACTGAGGTCTATGCCAGTTCCTGATCCCATCTCACTCTCTGGACCTACCAGG TGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTTAAGCCAGCCCCACTACTTCCTTCCCTGCCTCCCAGCTCAGTATTTAAAC ATCATCTCCCTTCTCTTTCTCGCATAACTCCCCACCCCTTTCTCCCCGATCCACCCAGGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGG >36229_36229_1_HEYL-COL9A2_HEYL_chr1_40105217_ENST00000372852_COL9A2_chr1_40777387_ENST00000372748_length(amino acids)=524AA_BP=54 MEGSADFLCPTNCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKGETGPHGYKGMV GAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTK GGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGVKGDKGSPGKT GPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHI VDVALKMLQEQLAEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKRGEKGDPGEVGRGHPG -------------------------------------------------------------- >36229_36229_2_HEYL-COL9A2_HEYL_chr1_40105218_ENST00000372852_COL9A2_chr1_40777387_ENST00000372748_length(transcript)=2748nt_BP=400nt CTCCTGGCTTCCCCGCGGGGCCTCCCAGGGCACCTGCCCAAGGCCACCCAGCGCGCGGCAGCCGAGACAGCGGAGCAGAGCCGGACCTCC CAGCCGTCGATGAAGGCGGCGACCGCCTAGGGCCTTCCCACGGCTCGGCGGCGCGTCACCGCGGGGGCGAGGGGGCGCCTGGGCGCCCGG AGCTGCGGCGCAGGAAAGGGCCCTGGGAAAGGGCGGTGGCGGCGCCCCCGAGGCGGGGCCGGGGCGGGGCCGGGGCGGGGCCTGACTTCC CGACTGGGAGCCTTAGCCGCGGGGCTGAGACCAGGCAGCCTGCGTTCGCCATGAAGCGACCCAAGGAGCCGAGCGGCTCCGACGGGGAGT CCGACGGACCCATCGACGTGGGCCAAGAGGGCCAGCTGAGGGGGACCCTGGACCAGATGGACCATCGGGGCCCCCAGGACCCCCTGGGAA ACCTGGTCGCCCGGGAACCATCCAGGGTCTGGAAGGCAGTGCGGATTTCCTGTGTCCAACCAACTGTCCACCCGGAATGAAAGGTCCCCC AGGGCTGCAGGGAGTGAAGGGGCATGCGGGCAAACGCGGGATTCTGGGTGATCCTGGCCACCAGGGGAAGCCGGGTCCCAAGGGAGATGT GGGTGCCTCTGGAGAGCAAGGCATCCCTGGACCACCGGGTCCCCAGGGCATCAGGGGCTACCCAGGCATGGCAGGGCCCAAGGGAGAGAC GGGCCCTCATGGATATAAAGGCATGGTGGGCGCTATCGGTGCCACTGGGCCACCGGGTGAGGAAGGTCCTAGGGGACCGCCAGGCCGAGC TGGGGAGAAGGGTGACGAGGGCAGCCCAGGTATTCGTGGACCCCAGGGGATCACAGGCCCGAAAGGAGCAACGGGCCCCCCAGGCATCAA CGGCAAGGATGGGACCCCAGGCACGCCTGGCATGAAGGGCAGTGCAGGACAGGCGGGACAGCCCGGAAGTCCAGGCCACCAGGGCCTAGC GGGTGTGCCAGGCCAGCCTGGGACAAAAGGAGGCCCTGGAGACCAGGGTGAGCCGGGCCCGCAGGGCCTTCCTGGATTCTCTGGTCCCCC TGGGAAAGAGGGAGAGCCAGGGCCTCGAGGAGAAATTGGTCCCCAGGGCATCATGGGACAGAAGGGTGACCAAGGCGAGAGGGGTCCAGT GGGGCAACCAGGCCCTCAGGGAAGGCAGGGCCCTAAGGGGGAGCAGGGCCCCCCCGGAATTCCAGGGCCCCAAGGCTTGCCAGGCGTCAA AGGAGACAAGGGCTCCCCAGGGAAGACCGGGCCCCGCGGCAAAGTGGGTGACCCAGGGGTGGCCGGCCTCCCCGGAGAGAAAGGCGAGAA GGGCGAGTCCGGCGAGCCGGGGCCCAAGGGACAGCAAGGAGTACGTGGAGAACCCGGCTACCCTGGCCCCAGCGGGGATGCGGGCGCCCC AGGGGTTCAGGGCTACCCTGGTCCCCCCGGCCCTCGAGGACTGGCCGGGAACCGAGGCGTGCCAGGACAGCCCGGGAGACAGGGCGTGGA GGGCCGGGATGCCACTGACCAGCACATCGTGGATGTGGCGCTGAAGATGCTGCAAGAGCAACTGGCAGAGGTCGCCGTGAGTGCCAAGCG GGAAGCCCTGGGTGCGGTGGGCATGATGGGTCCTCCAGGACCTCCTGGGCCCCCTGGGTACCCAGGCAAGCAGGGCCCCCATGGGCACCC TGGCCCTCGGGGCGTTCCTGGCATCGTGGGAGCCGTGGGTCAGATCGGCAACACGGGGCCCAAGGGAAAACGTGGAGAGAAGGGTGATCC AGGAGAAGTGGGACGGGGGCACCCCGGGATGCCTGGGCCCCCAGGGATCCCAGGACTCCCTGGCCGGCCTGGCCAGGCAATCAACGGCAA GGATGGAGATCGAGGGTCCCCAGGGGCTCCAGGAGAGGCAGGTCGACCTGGCCTGCCAGGCCCCGTGGGGCTGCCGGGCTTCTGTGAACC TGCCGCCTGCCTTGGAGCTTCGGCCTATGCCTCTGCCCGCCTTACAGAGCCTGGATCCATCAAGGGGCCTTGAGCATCAGGCCCAGACAG AGCCTGGCAGGCATCCTGGCGGGAAGGACCAGGTCCCCTCTGGGTGGACATGCACCCATCCCCAGTCCAGGAAACCATCTCCCCCAGGAC CTTCTGTCTGGGACTCAGGAGTCCTAAGGAAAAGGAATTCTAAAACATGGGGGAAGGGGAGGTAGAGCACTGATGGGTGAAAAAGTGAGG CCAACACACAGGGCAAGTGGTGTCGATGGAGTCGAAGCGCTGAAGGAATAGGGCGGCTTTCCTTCCAGCGAGCATCATTCGGCTGTTACC AAAACAAACATCTTAATCTGCACCTTTCTCCACTGGCCATCTTGTCCTTGGGTCAGTGGGACATGGGCACCTCGGGAGGCCCGGGCCCTG CCCAGCTACAGTTCCACCCCTCAGCTTGAGGACCAATGACTGAGGTCTATGCCAGTTCCTGATCCCATCTCACTCTCTGGACCTACCAGG TGACTGCTGCTGGGTGACTCCCCTGAGGCGGCTATACCCTTAAGCCAGCCCCACTACTTCCTTCCCTGCCTCCCAGCTCAGTATTTAAAC ATCATCTCCCTTCTCTTTCTCGCATAACTCCCCACCCCTTTCTCCCCGATCCACCCAGGCCTTTCTGTAAATAAAAGCTCCCAAGTTGGG >36229_36229_2_HEYL-COL9A2_HEYL_chr1_40105218_ENST00000372852_COL9A2_chr1_40777387_ENST00000372748_length(amino acids)=524AA_BP=54 MEGSADFLCPTNCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKGETGPHGYKGMV GAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTK GGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGVKGDKGSPGKT GPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHI VDVALKMLQEQLAEVAVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKRGEKGDPGEVGRGHPG -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for HEYL-COL9A2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for HEYL-COL9A2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for HEYL-COL9A2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |