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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
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Fusion gene:HIVEP3-LRP8 (FusionGDB2 ID:36558) |
Fusion Gene Summary for HIVEP3-LRP8 |
Fusion gene summary |
Fusion gene information | Fusion gene name: HIVEP3-LRP8 | Fusion gene ID: 36558 | Hgene | Tgene | Gene symbol | HIVEP3 | LRP8 | Gene ID | 59269 | 7804 |
Gene name | HIVEP zinc finger 3 | LDL receptor related protein 8 | |
Synonyms | KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C | APOER2|HSZ75190|LRP-8|MCI1 | |
Cytomap | 1p34.2 | 1p32.3 | |
Type of gene | protein-coding | protein-coding | |
Description | transcription factor HIVEP3ZAS family, member 3human immunodeficiency virus type I enhancer binding protein 3kappa-B and V(D)J recombination signal sequences-binding proteinkappa-binding protein 1zinc finger protein ZAS3 | low-density lipoprotein receptor-related protein 8ApoE receptor 2low density lipoprotein receptor-related protein 8, apolipoprotein e receptor | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q5T1R4 | Q14114 | |
Ensembl transtripts involved in fusion gene | ENST00000247584, ENST00000372583, ENST00000372584, ENST00000429157, ENST00000460604, | ENST00000347547, ENST00000354412, ENST00000465675, ENST00000460214, ENST00000306052, ENST00000371454, | |
Fusion gene scores | * DoF score | 21 X 18 X 10=3780 | 4 X 3 X 4=48 |
# samples | 25 | 4 | |
** MAII score | log2(25/3780*10)=-3.91838623444635 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: HIVEP3 [Title/Abstract] AND LRP8 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | HIVEP3(42041214)-LRP8(53792664), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | HIVEP3-LRP8 seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF. HIVEP3-LRP8 seems lost the major protein functional domain in Hgene partner, which is a tumor suppressor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | HIVEP3 | GO:0045893 | positive regulation of transcription, DNA-templated | 15790681 |
Tgene | LRP8 | GO:0006897 | endocytosis | 8626535 |
Fusion gene breakpoints across HIVEP3 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across LRP8 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | ESCA | TCGA-IG-A51D | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
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Fusion Gene ORF analysis for HIVEP3-LRP8 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000247584 | ENST00000347547 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5CDS-5UTR | ENST00000247584 | ENST00000354412 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5CDS-5UTR | ENST00000247584 | ENST00000465675 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5CDS-5UTR | ENST00000372583 | ENST00000347547 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5CDS-5UTR | ENST00000372583 | ENST00000354412 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5CDS-5UTR | ENST00000372583 | ENST00000465675 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5CDS-5UTR | ENST00000372584 | ENST00000347547 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5CDS-5UTR | ENST00000372584 | ENST00000354412 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5CDS-5UTR | ENST00000372584 | ENST00000465675 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5CDS-5UTR | ENST00000429157 | ENST00000347547 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5CDS-5UTR | ENST00000429157 | ENST00000354412 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5CDS-5UTR | ENST00000429157 | ENST00000465675 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5CDS-intron | ENST00000247584 | ENST00000460214 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5CDS-intron | ENST00000372583 | ENST00000460214 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5CDS-intron | ENST00000372584 | ENST00000460214 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5CDS-intron | ENST00000429157 | ENST00000460214 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5UTR-3CDS | ENST00000460604 | ENST00000306052 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5UTR-3CDS | ENST00000460604 | ENST00000371454 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5UTR-5UTR | ENST00000460604 | ENST00000347547 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5UTR-5UTR | ENST00000460604 | ENST00000354412 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5UTR-5UTR | ENST00000460604 | ENST00000465675 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
5UTR-intron | ENST00000460604 | ENST00000460214 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
Frame-shift | ENST00000247584 | ENST00000306052 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
Frame-shift | ENST00000247584 | ENST00000371454 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
Frame-shift | ENST00000372584 | ENST00000306052 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
Frame-shift | ENST00000372584 | ENST00000371454 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
Frame-shift | ENST00000429157 | ENST00000306052 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
Frame-shift | ENST00000429157 | ENST00000371454 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
In-frame | ENST00000372583 | ENST00000306052 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
In-frame | ENST00000372583 | ENST00000371454 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000372583 | HIVEP3 | chr1 | 42041214 | - | ENST00000306052 | LRP8 | chr1 | 53792664 | - | 10334 | 6093 | 886 | 6180 | 1764 |
ENST00000372583 | HIVEP3 | chr1 | 42041214 | - | ENST00000371454 | LRP8 | chr1 | 53792664 | - | 9149 | 6093 | 886 | 6180 | 1764 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000372583 | ENST00000306052 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - | 0.005030297 | 0.99496967 |
ENST00000372583 | ENST00000371454 | HIVEP3 | chr1 | 42041214 | - | LRP8 | chr1 | 53792664 | - | 0.007761939 | 0.9922381 |
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Fusion Genomic Features for HIVEP3-LRP8 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for HIVEP3-LRP8 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:42041214/chr1:53792664) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
HIVEP3 | LRP8 |
FUNCTION: Plays a role of transcription factor; binds to recognition signal sequences (Rss heptamer) for somatic recombination of immunoglobulin and T-cell receptor gene segments; Binds also to the kappa-B motif of gene such as S100A4, involved in cell progression and differentiation. Kappa-B motif is a gene regulatory element found in promoters and enhancers of genes involved in immunity, inflammation, and growth and that responds to viral antigens, mitogens, and cytokines. Involvement of HIVEP3 in cell growth is strengthened by the fact that its down-regulation promotes cell cycle progression with ultimate formation of multinucleated giant cells. Strongly inhibits TNF-alpha-induced NF-kappa-B activation; Interferes with nuclear factor NF-kappa-B by several mechanisms: as transcription factor, by competing for Kappa-B motif and by repressing transcription in the nucleus; through a non transcriptional process, by inhibiting nuclear translocation of RELA by association with TRAF2, an adapter molecule in the tumor necrosis factor signaling, which blocks the formation of IKK complex. Interaction with TRAF proteins inhibits both NF-Kappa-B-mediated and c-Jun N-terminal kinase/JNK-mediated responses that include apoptosis and proinflammatory cytokine gene expression. Positively regulates the expression of IL2 in T-cell. Essential regulator of adult bone formation. {ECO:0000269|PubMed:11161801}. | FUNCTION: Cell surface receptor for Reelin (RELN) and apolipoprotein E (apoE)-containing ligands. LRP8 participates in transmitting the extracellular Reelin signal to intracellular signaling processes, by binding to DAB1 on its cytoplasmic tail. Reelin acts via both the VLDL receptor (VLDLR) and LRP8 to regulate DAB1 tyrosine phosphorylation and microtubule function in neurons. LRP8 has higher affinity for Reelin than VLDLR. LRP8 is thus a key component of the Reelin pathway which governs neuronal layering of the forebrain during embryonic brain development. Binds the endoplasmic reticulum resident receptor-associated protein (RAP). Binds dimers of beta 2-glycoprotein I and may be involved in the suppression of platelet aggregation in the vasculature. Highly expressed in the initial segment of the epididymis, where it affects the functional expression of clusterin and phospholipid hydroperoxide glutathione peroxidase (PHGPx), two proteins required for sperm maturation. May also function as an endocytic receptor. Not required for endocytic uptake of SEPP1 in the kidney which is mediated by LRP2 (By similarity). Together with its ligand, apolipoprotein E (apoE), may indirectly play a role in the suppression of the innate immune response by controlling the survival of myeloid-derived suppressor cells (By similarity). {ECO:0000250|UniProtKB:Q924X6, ECO:0000269|PubMed:12807892, ECO:0000269|PubMed:12899622, ECO:0000269|PubMed:12950167}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 1442_1466 | 1735 | 2407.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 1442_1466 | 1735 | 2407.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 1442_1466 | 1735 | 2406.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 1442_1466 | 1735 | 2406.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 308_334 | 1735 | 2407.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 378_414 | 1735 | 2407.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 797_819 | 1735 | 2407.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 844_880 | 1735 | 2407.0 | Compositional bias | Note=Glu/Pro-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 916_948 | 1735 | 2407.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 308_334 | 1735 | 2407.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 378_414 | 1735 | 2407.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 797_819 | 1735 | 2407.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 844_880 | 1735 | 2407.0 | Compositional bias | Note=Glu/Pro-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 916_948 | 1735 | 2407.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 308_334 | 1735 | 2406.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 378_414 | 1735 | 2406.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 797_819 | 1735 | 2406.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 844_880 | 1735 | 2406.0 | Compositional bias | Note=Glu/Pro-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 916_948 | 1735 | 2406.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 308_334 | 1735 | 2406.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 378_414 | 1735 | 2406.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 797_819 | 1735 | 2406.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 844_880 | 1735 | 2406.0 | Compositional bias | Note=Glu/Pro-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 916_948 | 1735 | 2406.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 903_909 | 1735 | 2407.0 | Motif | Nuclear localization signal |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 903_909 | 1735 | 2407.0 | Motif | Nuclear localization signal |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 903_909 | 1735 | 2406.0 | Motif | Nuclear localization signal |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 903_909 | 1735 | 2406.0 | Motif | Nuclear localization signal |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 192_242 | 1735 | 2407.0 | Region | Note=ZAS1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 211_1074 | 1735 | 2407.0 | Region | No DNA binding activity or transactivation activity%2C but complete prevention of TRAF-dependent NF-Kappa-B activation%3B associates with TRAF2 and JUN |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 264_287 | 1735 | 2407.0 | Region | Note=Acidic 1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 862_883 | 1735 | 2407.0 | Region | Note=Acidic 2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 192_242 | 1735 | 2407.0 | Region | Note=ZAS1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 211_1074 | 1735 | 2407.0 | Region | No DNA binding activity or transactivation activity%2C but complete prevention of TRAF-dependent NF-Kappa-B activation%3B associates with TRAF2 and JUN |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 264_287 | 1735 | 2407.0 | Region | Note=Acidic 1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 862_883 | 1735 | 2407.0 | Region | Note=Acidic 2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 192_242 | 1735 | 2406.0 | Region | Note=ZAS1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 211_1074 | 1735 | 2406.0 | Region | No DNA binding activity or transactivation activity%2C but complete prevention of TRAF-dependent NF-Kappa-B activation%3B associates with TRAF2 and JUN |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 264_287 | 1735 | 2406.0 | Region | Note=Acidic 1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 862_883 | 1735 | 2406.0 | Region | Note=Acidic 2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 192_242 | 1735 | 2406.0 | Region | Note=ZAS1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 211_1074 | 1735 | 2406.0 | Region | No DNA binding activity or transactivation activity%2C but complete prevention of TRAF-dependent NF-Kappa-B activation%3B associates with TRAF2 and JUN |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 264_287 | 1735 | 2406.0 | Region | Note=Acidic 1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 862_883 | 1735 | 2406.0 | Region | Note=Acidic 2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 192_214 | 1735 | 2407.0 | Zinc finger | C2H2-type 1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 220_242 | 1735 | 2407.0 | Zinc finger | C2H2-type 2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 640_670 | 1735 | 2407.0 | Zinc finger | CCHC HIVEP-type |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 192_214 | 1735 | 2407.0 | Zinc finger | C2H2-type 1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 220_242 | 1735 | 2407.0 | Zinc finger | C2H2-type 2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 640_670 | 1735 | 2407.0 | Zinc finger | CCHC HIVEP-type |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 192_214 | 1735 | 2406.0 | Zinc finger | C2H2-type 1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 220_242 | 1735 | 2406.0 | Zinc finger | C2H2-type 2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 640_670 | 1735 | 2406.0 | Zinc finger | CCHC HIVEP-type |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 192_214 | 1735 | 2406.0 | Zinc finger | C2H2-type 1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 220_242 | 1735 | 2406.0 | Zinc finger | C2H2-type 2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 640_670 | 1735 | 2406.0 | Zinc finger | CCHC HIVEP-type |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 126_164 | 41 | 964.0 | Domain | LDL-receptor class A 3 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 166_202 | 41 | 964.0 | Domain | LDL-receptor class A 4 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 205_246 | 41 | 964.0 | Domain | LDL-receptor class A 5 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 258_295 | 41 | 964.0 | Domain | LDL-receptor class A 6 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 298_334 | 41 | 964.0 | Domain | LDL-receptor class A 7 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 336_375 | 41 | 964.0 | Domain | EGF-like 1 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 376_415 | 41 | 964.0 | Domain | EGF-like 2%3B calcium-binding | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 46_82 | 41 | 964.0 | Domain | LDL-receptor class A 1 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 85_123 | 41 | 964.0 | Domain | LDL-receptor class A 2 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 126_164 | 41 | 794.0 | Domain | LDL-receptor class A 3 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 166_202 | 41 | 794.0 | Domain | LDL-receptor class A 4 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 205_246 | 41 | 794.0 | Domain | LDL-receptor class A 5 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 258_295 | 41 | 794.0 | Domain | LDL-receptor class A 6 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 298_334 | 41 | 794.0 | Domain | LDL-receptor class A 7 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 336_375 | 41 | 794.0 | Domain | EGF-like 1 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 376_415 | 41 | 794.0 | Domain | EGF-like 2%3B calcium-binding | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 46_82 | 41 | 794.0 | Domain | LDL-receptor class A 1 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 85_123 | 41 | 794.0 | Domain | LDL-receptor class A 2 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 126_164 | 41 | 701.0 | Domain | LDL-receptor class A 3 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 166_202 | 41 | 701.0 | Domain | LDL-receptor class A 4 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 205_246 | 41 | 701.0 | Domain | LDL-receptor class A 5 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 258_295 | 41 | 701.0 | Domain | LDL-receptor class A 6 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 298_334 | 41 | 701.0 | Domain | LDL-receptor class A 7 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 336_375 | 41 | 701.0 | Domain | EGF-like 1 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 376_415 | 41 | 701.0 | Domain | EGF-like 2%3B calcium-binding | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 46_82 | 41 | 701.0 | Domain | LDL-receptor class A 1 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 85_123 | 41 | 701.0 | Domain | LDL-receptor class A 2 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 126_164 | 41 | 905.0 | Domain | LDL-receptor class A 3 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 166_202 | 41 | 905.0 | Domain | LDL-receptor class A 4 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 205_246 | 41 | 905.0 | Domain | LDL-receptor class A 5 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 258_295 | 41 | 905.0 | Domain | LDL-receptor class A 6 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 298_334 | 41 | 905.0 | Domain | LDL-receptor class A 7 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 336_375 | 41 | 905.0 | Domain | EGF-like 1 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 376_415 | 41 | 905.0 | Domain | EGF-like 2%3B calcium-binding | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 46_82 | 41 | 905.0 | Domain | LDL-receptor class A 1 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 85_123 | 41 | 905.0 | Domain | LDL-receptor class A 2 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 740_798 | 41 | 964.0 | Region | Note=Clustered O-linked oligosaccharides | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 740_798 | 41 | 794.0 | Region | Note=Clustered O-linked oligosaccharides | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 740_798 | 41 | 701.0 | Region | Note=Clustered O-linked oligosaccharides | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 740_798 | 41 | 905.0 | Region | Note=Clustered O-linked oligosaccharides | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 462_508 | 41 | 964.0 | Repeat | Note=LDL-receptor class B 1 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 509_551 | 41 | 964.0 | Repeat | Note=LDL-receptor class B 2 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 552_595 | 41 | 964.0 | Repeat | Note=LDL-receptor class B 3 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 596_639 | 41 | 964.0 | Repeat | Note=LDL-receptor class B 4 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 640_681 | 41 | 964.0 | Repeat | Note=LDL-receptor class B 5 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 462_508 | 41 | 794.0 | Repeat | Note=LDL-receptor class B 1 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 509_551 | 41 | 794.0 | Repeat | Note=LDL-receptor class B 2 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 552_595 | 41 | 794.0 | Repeat | Note=LDL-receptor class B 3 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 596_639 | 41 | 794.0 | Repeat | Note=LDL-receptor class B 4 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 640_681 | 41 | 794.0 | Repeat | Note=LDL-receptor class B 5 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 462_508 | 41 | 701.0 | Repeat | Note=LDL-receptor class B 1 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 509_551 | 41 | 701.0 | Repeat | Note=LDL-receptor class B 2 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 552_595 | 41 | 701.0 | Repeat | Note=LDL-receptor class B 3 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 596_639 | 41 | 701.0 | Repeat | Note=LDL-receptor class B 4 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 640_681 | 41 | 701.0 | Repeat | Note=LDL-receptor class B 5 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 462_508 | 41 | 905.0 | Repeat | Note=LDL-receptor class B 1 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 509_551 | 41 | 905.0 | Repeat | Note=LDL-receptor class B 2 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 552_595 | 41 | 905.0 | Repeat | Note=LDL-receptor class B 3 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 596_639 | 41 | 905.0 | Repeat | Note=LDL-receptor class B 4 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 640_681 | 41 | 905.0 | Repeat | Note=LDL-receptor class B 5 | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 42_826 | 41 | 964.0 | Topological domain | Extracellular | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 848_963 | 41 | 964.0 | Topological domain | Cytoplasmic | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 42_826 | 41 | 794.0 | Topological domain | Extracellular | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 848_963 | 41 | 794.0 | Topological domain | Cytoplasmic | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 42_826 | 41 | 701.0 | Topological domain | Extracellular | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 848_963 | 41 | 701.0 | Topological domain | Cytoplasmic | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 42_826 | 41 | 905.0 | Topological domain | Extracellular | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 848_963 | 41 | 905.0 | Topological domain | Cytoplasmic | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000306052 | 0 | 19 | 827_847 | 41 | 964.0 | Transmembrane | Helical | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000347547 | 0 | 17 | 827_847 | 41 | 794.0 | Transmembrane | Helical | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000354412 | 0 | 16 | 827_847 | 41 | 701.0 | Transmembrane | Helical | |
Tgene | LRP8 | chr1:42041214 | chr1:53792664 | ENST00000371454 | 0 | 18 | 827_847 | 41 | 905.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 1907_1936 | 1735 | 2407.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 1907_1936 | 1735 | 2407.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 1907_1936 | 1735 | 2406.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 1907_1936 | 1735 | 2406.0 | Compositional bias | Note=Ser-rich |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 1754_1806 | 1735 | 2407.0 | Region | Note=ZAS2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 1817_1872 | 1735 | 2407.0 | Region | Note=Acidic 3 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 2053_2148 | 1735 | 2407.0 | Region | Note=6 X 4 AA tandem repeats of S-P-X-[RK] |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 1754_1806 | 1735 | 2407.0 | Region | Note=ZAS2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 1817_1872 | 1735 | 2407.0 | Region | Note=Acidic 3 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 2053_2148 | 1735 | 2407.0 | Region | Note=6 X 4 AA tandem repeats of S-P-X-[RK] |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 1754_1806 | 1735 | 2406.0 | Region | Note=ZAS2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 1817_1872 | 1735 | 2406.0 | Region | Note=Acidic 3 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 2053_2148 | 1735 | 2406.0 | Region | Note=6 X 4 AA tandem repeats of S-P-X-[RK] |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 1754_1806 | 1735 | 2406.0 | Region | Note=ZAS2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 1817_1872 | 1735 | 2406.0 | Region | Note=Acidic 3 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 2053_2148 | 1735 | 2406.0 | Region | Note=6 X 4 AA tandem repeats of S-P-X-[RK] |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 1964_1967 | 1735 | 2407.0 | Repeat | Note=1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 1970_1973 | 1735 | 2407.0 | Repeat | Note=2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 1993_1996 | 1735 | 2407.0 | Repeat | Note=3 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 1998_2001 | 1735 | 2407.0 | Repeat | Note=4 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 2067_2070 | 1735 | 2407.0 | Repeat | Note=5 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 2079_2082 | 1735 | 2407.0 | Repeat | Note=6 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 1964_1967 | 1735 | 2407.0 | Repeat | Note=1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 1970_1973 | 1735 | 2407.0 | Repeat | Note=2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 1993_1996 | 1735 | 2407.0 | Repeat | Note=3 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 1998_2001 | 1735 | 2407.0 | Repeat | Note=4 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 2067_2070 | 1735 | 2407.0 | Repeat | Note=5 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 2079_2082 | 1735 | 2407.0 | Repeat | Note=6 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 1964_1967 | 1735 | 2406.0 | Repeat | Note=1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 1970_1973 | 1735 | 2406.0 | Repeat | Note=2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 1993_1996 | 1735 | 2406.0 | Repeat | Note=3 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 1998_2001 | 1735 | 2406.0 | Repeat | Note=4 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 2067_2070 | 1735 | 2406.0 | Repeat | Note=5 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 2079_2082 | 1735 | 2406.0 | Repeat | Note=6 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 1964_1967 | 1735 | 2406.0 | Repeat | Note=1 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 1970_1973 | 1735 | 2406.0 | Repeat | Note=2 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 1993_1996 | 1735 | 2406.0 | Repeat | Note=3 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 1998_2001 | 1735 | 2406.0 | Repeat | Note=4 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 2067_2070 | 1735 | 2406.0 | Repeat | Note=5 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 2079_2082 | 1735 | 2406.0 | Repeat | Note=6 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 1754_1776 | 1735 | 2407.0 | Zinc finger | C2H2-type 3 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000247584 | - | 4 | 8 | 1782_1806 | 1735 | 2407.0 | Zinc finger | C2H2-type 4 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 1754_1776 | 1735 | 2407.0 | Zinc finger | C2H2-type 3 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372583 | - | 5 | 9 | 1782_1806 | 1735 | 2407.0 | Zinc finger | C2H2-type 4 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 1754_1776 | 1735 | 2406.0 | Zinc finger | C2H2-type 3 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000372584 | - | 4 | 8 | 1782_1806 | 1735 | 2406.0 | Zinc finger | C2H2-type 4 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 1754_1776 | 1735 | 2406.0 | Zinc finger | C2H2-type 3 |
Hgene | HIVEP3 | chr1:42041214 | chr1:53792664 | ENST00000429157 | - | 4 | 8 | 1782_1806 | 1735 | 2406.0 | Zinc finger | C2H2-type 4 |
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Fusion Gene Sequence for HIVEP3-LRP8 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>36558_36558_1_HIVEP3-LRP8_HIVEP3_chr1_42041214_ENST00000372583_LRP8_chr1_53792664_ENST00000306052_length(transcript)=10334nt_BP=6093nt CCTGCCTGGCCGGAATAATTCATGAAGAAGGGGCTGGATCCGTGGGTCAGAGAACACAGGACCAGTTTGCCATCCCAAGGCCGAAGGCCT CCCTCCAACACAGTTCTCCAAGCTCTAGAAATCTCTGACACATCTTGACCATGAGACCACGGCTGGTTTTTGGCAGGATTCGAGGCACAA ACCCAGCAGCCTCAACCTAGTTCATGGAGGAGCCTCGCGGGGTCCTGGCCAAGCAAGCCCGCCCCTCTGGTGGGAAGAGCGGCGCCTAGG TGGAGGGTGGCTGCCGTAGGAGTGGACATGAATGCTGGCTTTCAGAGAGAACAGCGTTTCAGTTTTGGTCATCGGAAGTGGTGCCTTCAG CACAGAAGAAGAGCGTGATTTCTCCTCCAAGGCCGTTGATCTCCAACCCAGAACTAAAGGGGAGAAGAGCCACCCCCAGCATCCAGCGTG GCATCTCTTGTGCCAGGACCAGGGATGACTGGGCCATGGACACAGATGTCTCCAACCTTCAACCGTTTGCATAGCACACGGGGGACTCGT GGGGGCCACCTGCCACTGCCAGCTGAAACAATACAATGGCAATACTGACATCCTTCATGACGTTTTCCCGACAGACATTCAGGCAGAAAG TGCTGGTGCGTTTTCTGTCTGCAAAGTAGAGGGCCATGCCTCACCAATAGAATAGCGTGGGCCCTGATGACCTGCTCCGAGTCCACTCAC AGCCAGTGACACTTGCAAAAAACTCCCAAAGCCGTCTTGGGTTTGGCTCCCACAGCTCTTGACCAATGTGGCCAAAGCTGGACACCTCCT TGGGACACTGGGATTATTCATAAATGCAGCCCGCCCTGACTCTCCCTGAATAGCATCTGAAGTCTTTGTGAAGGTCATGGATCCTGAACA AAGTGTCAAGGGCACCAAGAAGGCTGAGGGAAGTCCCCGGAAGCGGCTGACCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCGT CCCATACCCAGGCAGCGGCACAGCTGCCACCCAAGAGAGCCCCGCCCAAGAGCTCTTAGCCCCGCAGCCCTTCCCGGGCCCCTCATCAGT TCTTAGGGAAGGCTCTCAGGAGAAAACGGGCCAGCAGCAGAAGCCCCCCAAAAGGCCCCCCATCGAAGCATCCGTCCACATCTCACAGCT TCCGCAGCACCCTCTGACACCAGCATTCATGTCGCCTGGCAAACCTGAGCATCTCCTGGAGGGGTCCACATGGCAACTGGTTGACCCCAT GAGACCTGGACCCTCTGGCTCCTTCGTGGCCCCTGGGCTCCATCCTCAGAGCCAGCTCCTTCCTTCCCACGCTTCCATCATTCCCCCCGA GGACCTTCCTGGAGTCCCCAAAGTCTTCGTGCCTCGTCCTTCCCAGGTCTCCTTGAAGCCCACAGAAGAGGCACACAAGAAGGAGAGGAA GCCCCAGAAGCCAGGCAAGTACATCTGCCAGTACTGCAGCCGGCCCTGTGCCAAGCCCAGCGTGCTCCAGAAGCACATTCGCTCACACAC AGGTGAGAGGCCCTACCCCTGCGGCCCCTGTGGCTTCTCCTTCAAGACCAAGAGTAATCTCTACAAGCACAGGAAGTCCCATGCCCACCG CATCAAAGCAGGCCTGGCCTCAGGCATGGGTGGCGAGATGTACCCACATGGGCTGGAGATGGAGCGGATCCCTGGGGAAGAGTTTGAGGA GCCCACTGAGGGAGAAAGCACAGATTCTGAAGAGGAGACTAGTGCCACCTCTGGTCACCCTGCAGAGCTCTCCCCAAGACCCAAGCAGCC CCTTCTCTCCAGCGGGCTATACAGCTCTGGGAGCCACAGTTCCAGCCACGAACGCTGTTCCCTGTCCCAGTCCAGCACAGCCCAGTCACT CGAAGACCCCCCTCCATTTGTGGAACCCTCATCTGAGCACCCCCTGAGCCATAAACCTGAAGACACCCACACGATTAAGCAGAAGCTGGC CCTCCGCTTAAGCGAGAGGAAGAAGGTGATCGATGAGCAGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGTCTGGGTATTTCTC TCGCTCCGAGAGTGCAGAGCAGCAGGTCAGCCCCCCAAACACCAACGCCAAGTCCTACGCTGAGATCATCTTTGGCAAGTGTGGGCGAAT AGGACAGCGGACCGCCATGCTGACAGCCACCTCCACCCAGCCCCTCCTGCCCCTGTCCACCGAAGACAAGCCCAGCCTGGTGCCTTTGTC TGTACCCCGGACGCAGGTGATCGAGCACATCACGAAGCTCATCACCATCAACGAGGCCGTGGTGGACACCAGCGAGATCGACAGCGTGAA GCCAAGGCGGAGCTCACTGTCCAGGCGCAGCAGCATGGAGTCCCCAAAATCCAGCCTCTACCGGGAGCCCCTGTCATCCCACAGTGAGAA AACCAAGCCTGAACAATCACTGCTGAGCCTCCAGCACCCGCCCAGTACCGCCCCCCCTGTGCCTCTCCTGAGAAGCCACTCAATGCCTTC TGCCGCCTGCACTATCAGCACCCCCCACCACCCCTTCCGAGGTAGCTACTCCTTCGATGACCATATCACCGACTCCGAAGCCCTGAGCCA CAGCAGTCACGTGTTTACCTCCCACCCCCGGATGCTGAAGCGCCAGCCGGCAATCGAATTACCTTTGGGAGGGGAATACAGTTCTGAGGA GCCTGGCCCAAGCAGCAAAGACACAGCCTCCAAGCCCTCGGACGAAGTGGAACCCAAGGAAAGCGAGCTTACCAAAAAGACCAAGAAGGG TTTGAAAACAAAAGGGGTGATCTACGAATGTAACATATGTGGTGCTCGGTACAAGAAAAGGGATAACTACGAAGCCCACAAAAAATACTA CTGCTCAGAGCTTCAGATCGCAAAGCCCATCTCTGCAGGCACCCACACATCTCCAGAAGCTGAAAAGAGTCAGATTGAGCATGAGCCGTG GTCCCAAATGATGCATTACAAACTGGGAACCACCCTGGAACTCACTCCACTGAGGAAGAGGAGGAAAGAGAAGAGCCTTGGGGACGAGGA AGAGCCACCTGCCTTTGAGTCCACAAAAAGTCAGTTTGGCAGCCCCGGGCCATCTGATGCTGCTCGGAACCTTCCCCTGGAGTCCACCAA GTCACCAGCAGAACCAAGTAAATCAGTGCCCTCCTTGGAGGGACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTTCAGA ATCAGGGAAGGAGAGGAGAACAACGTCCAAAGAAATTTCTGTCATCCAGCACACCAGCTCCTTTGAGAAATCTGATTCTCTCGAGCAGCC GAGTGGCTTGGAAGGGGAAGACAAACCTCTGGCCCAGTTCCCATCACCCCCACCTGCCCCACACGGACGCTCTGCTCACTCCCTGCAGCC TAAGTTGGTCCGCCAGCCCAACATTCAGGTTCCTGAGATCCTAGTAACTGAGGAGCCTGACCGGCCGGACACAGAGCCAGAGCCGCCCCC TAAGGAACCTGAGAAGACTGAGGAGTTCCAATGGCCCCAGCGCAGCCAGACACTTGCCCAGCTCCCAGCTGAGAAGCTGCCACCCAAAAA GAAGAGGTTGCGCCTGGCAGAGATGGCCCAATCATCAGGGGAGTCCAGCTTCGAGTCCTCTGTGCCTCTGTCTCGCAGCCCGAGCCAGGA AAGCAATGTCTCTTTGAGTGGGTCCAGCCGCTCAGCCTCGTTTGAGAGGGATGACCATGGGAAAGCCGAGGCCCCCAGTCCCTCATCTGA CATGCGCCCCAAACCCCTGGGCACCCACATGTTGACTGTCCCCAGCCACCACCCACATGCCCGAGAGATGCGGAGGTCAGCCTCAGAGCA GAGCCCCAACGTTTCCCATTCTGCCCACATGACCGAGACACGCAGCAAATCCTTTGACTATGGCAGCTTGTCCTTGACAGGCCCTTCTGC TCCAGCCCCAGTGGCTCCACCAGCGCGGGTGGCCCCGCCAGAGAGAAGAAAATGCTTCTTGGTGAGACAGGCCTCTCTGAGCAGGCCTCC AGAATCTGAGTTGGAGGTTGCCCCCAAGGGAAGACAGGAGAGCGAAGAACCACAGCCCTCATCCAGTAAACCCTCTGCCAAAAGCTCATT GTCCCAGATTTCCTCTGCGGCCACCTCACATGGTGGACCCCCGGGAGGCAAGGGCCCAGGGCAGGACAGGCCCCCATTGGGGCCCACTGT GCCCTACACAGAAGCACTGCAAGTGTTCCACCACCCCGTTGCCCAGACACCCCTGCATGAGAAGCCATACCTGCCCCCACCAGTCTCCCT TTTCTCCTTCCAGCATCTCGTGCAGCATGAGCCAGGACAGTCTCCAGAATTCTTCTCCACCCAGGCCATGTCCAGCCTCCTGTCCTCACC ATACTCCATGCCCCCACTTCCTCCCTCCTTATTTCAAGCCCCACCGCTTCCTCTCCAGCCTACTGTTCTGCACCCAGGCCAACTCCATCT CCCCCAGCTCATGCCTCACCCAGCCAACATCCCCTTCAGGCAGCCCCCTTCCTTCCTCCCCATGCCATACCCGACCTCCTCAGCACTGTC TTCTGGGTTTTTCCTGCCTCTGCAATCCCAGTTTGCACTTCAGCTCCCTGGTGATGTGGAAAGCCATCTGCCCCAGATCAAAACCAGCCT GGCCCCACTGGCAACAGGAAGTGCTGGCCTCTCCCCCAGCACAGAGTACAGCAGTGACATCCGGCTACCCCCTGTGGCTCCCCCAGCCAG CTCCTCAGCACCTACATCAGCTCCTCCACTGGCCCTGCCTGCCTGTCCAGACACCATGGTGTCCCTGGTTGTGCCTGTCCGTGTTCAGAC CAATATGCCGTCCTATGGGAGCGCAATGTACACCACCCTTTCCCAGATCTTGGTCACCCAGTCCCAAGGCAGCTCAGCAACTGTGGCACT TCCCAAGTTTGAGGAACCCCCATCAAAGGGGACGACTGTATGTGGTGCAGATGTGCATGAGGTTGGGCCCGGCCCTTCTGGGTTAAGTGA AGAGCAAAGCAGAGCTTTCCCAACTCCATACCTGAGAGTGCCTGTGACATTACCTGAAAGAAAAGGCACTTCCCTGTCATCAGAGAGTAT CTTGAGCCTGGAGGGGAGTTCATCAACAGCAGGGGGAAGCAAACGTGTCCTTTCACCAGCTGGCAGCCTTGAACTTACCATGGAAACCCA GCAGCAAAAAAGAGTGAAGGAGGAGGAGGCTTCCAAGGCAGATGAAAAACTTGAGCTGGTAAAACCATGCAGTGTGGTCCTTACCAGCAC CGAGGATGGGAAGAGGCCAGAGAAATCCCACTTAGGCAACCAGGGCCAAGGCAGGAGGGAGCTAGAAATGCTGTCCAGCCTGTCCTCAGA TCCATCTGACACAAAGGAAATTCCTCCCCTCCCTCACCCTGCATTGTCCCATGGGACAGCCCCAGGCTCAGAAGCTTTGAAGGAATATCC CCAGCCATCTGGCAAACCTCACCGAAGAGGGTTGACCCCACTGAGCGTGAAGAAAGAAGATTCCAAGGAACAACCTGATCTCCCCTCCTT GGCACCTCCGAGCTCTCTGCCTCTGTCAGAAACGTCCTCCAGACCAGCCAAGTCACAAGAAGGTACGGACTCAAAGAAGGTACTGCAGTT CCCCAGCCTCCACACAACCACTAATGTCAGTTGGTGCTATTTAAACTACATTAAGCCAAATCACATCCAGCATGCAGATAGGAGGTCCTC TGTTTACGCTGGTTGGTGCATAAGTTTGTACAACCCCAACCTTCCGGGGGTTTCCACTAAAGCTGCTTTGTCCCTCCTGAGGTCTAAGCA GAAAGTGAGCAAAGAGACATACACCATGGCCACAGCTCCGCATCCTGAGGCAGGAAGGCTTGTGCCATCCAGCTCCCGCAAGCCCCGCAT GACAGAGGTTCACCTCCCTTCACTGGTTTCCCCGGAAGGCCAGAAAGATCTAGCTAGAGTGGAGAAGGAAGAAGAGAGGAGAGGGGAGCC GGAGGAGGATGCTCCTGCCTCCCAGAGAGGGGAGCCGGCGAGGATCAAAATCTTCGAAGGAGGGGCCGGCCAAGGATTGCGAAAAGGACC AATTCCAGTGCCGGAACGAGCGCTGCATCCCCTCTGTGTGGAGATGCGACGAGGACGATGACTGCTTAGACCACAGCGACGAGGACGACT GCCCCAAGAAGACCTGTGCAGACAGTGACTTCACCTGTGACAACGGCCACTGCATCCACGAACGGTGGAAGTGTGACGGCGAGGAGGAGT GTCCTGATGGCTCCGATGAGTCCGAGGCCACTTGCACCAAGCAGGTGTGTCCTGCAGAGAAGCTGAGCTGTGGACCCACCAGCCACAAGT GTGTACCTGCCTCGTGGCGCTGCGACGGGGAGAAGGACTGCGAGGGTGGAGCGGATGAGGCCGGCTGTGCTACCTTGTGCGCCCCGCACG AGTTCCAGTGCGGCAACCGCTCGTGCCTGGCCGCCGTGTTCGTGTGCGACGGCGACGACGACTGTGGTGACGGCAGCGATGAGCGCGGCT GTGCAGACCCGGCCTGCGGGCCCCGCGAGTTCCGCTGCGGCGGCGATGGCGGCGGCGCCTGCATCCCGGAGCGCTGGGTCTGCGACCGCC AGTTTGACTGCGAGGACCGCTCGGACGAGGCAGCCGAGCTCTGCGGCCGTCCGGGCCCCGGGGCCACGTCCGCGCCCGCCGCCTGCGCCA CCGCCTCCCAGTTCGCCTGCCGCAGCGGCGAGTGCGTGCACCTGGGCTGGCGCTGCGACGGCGACCGCGACTGCAAAGACAAATCGGACG AGGCCGACTGCCCACTGGGCACCTGCCGTGGGGACGAGTTCCAGTGTGGGGATGGGACATGTGTCCTTGCAATCAAGCACTGCAACCAGG AGCAGGACTGTCCAGATGGGAGTGATGAAGCTGGCTGCCTACAGGGGCTGAACGAGTGTCTGCACAACAATGGCGGCTGCTCACACATCT GCACTGACCTCAAGATTGGCTTTGAATGCACGTGCCCAGCAGGCTTCCAGCTCCTGGACCAGAAGACCTGTGGCGACATTGATGAGTGCA AGGACCCAGATGCCTGCAGCCAGATCTGTGTCAATTACAAGGGCTATTTTAAGTGTGAGTGCTACCCTGGCTACGAGATGGACCTACTGA CCAAGAACTGCAAGGCTGCTGCTGGCAAGAGCCCATCCCTAATCTTCACCAACCGGCACGAGGTGCGGAGGATCGACCTGGTGAAGCGGA ACTATTCACGCCTCATCCCCATGCTCAAGAATGTCGTGGCACTAGATGTGGAAGTTGCCACCAATCGCATCTACTGGTGTGACCTCTCCT ACCGTAAGATCTATAGCGCCTACATGGACAAGGCCAGTGACCCGAAAGAGCAGGAGGTCCTCATTGACGAGCAGTTGCACTCTCCAGAGG GCCTGGCAGTGGACTGGGTCCACAAGCACATCTACTGGACTGACTCGGGCAATAAGACCATCTCAGTGGCCACAGTTGATGGTGGCCGCC GACGCACTCTCTTCAGCCGTAACCTCAGTGAACCCCGGGCCATCGCTGTTGACCCCCTGCGAGGGTTCATGTATTGGTCTGACTGGGGGG ACCAGGCCAAGATTGAGAAATCTGGGCTCAACGGTGTGGACCGGCAAACACTGGTGTCAGACAATATTGAATGGCCCAACGGAATCACCC TGGATCTGCTGAGCCAGCGCTTGTACTGGGTAGACTCCAAGCTACACCAACTGTCCAGCATTGACTTCAGTGGAGGCAACAGAAAGACGC TGATCTCCTCCACTGACTTCCTGAGCCACCCTTTTGGGATAGCTGTGTTTGAGGACAAGGTGTTCTGGACAGACCTGGAGAACGAGGCCA TTTTCAGTGCAAATCGGCTCAATGGCCTGGAAATCTCCATCCTGGCTGAGAACCTCAACAACCCACATGACATTGTCATCTTCCATGAGC TGAAGCAGCCAAGAGCTCCAGATGCCTGTGAGCTGAGTGTCCAGCCTAATGGAGGCTGTGAATACCTGTGCCTTCCTGCTCCTCAGATCT CCAGCCACTCTCCCAAGTACACATGTGCCTGTCCTGACACAATGTGGCTGGGTCCAGACATGAAGAGGTGCTACCGAGCACCTCAATCTA CCTCAACTACGACGTTAGCTTCTACCATGACGAGGACAGTACCTGCCACCACAAGAGCCCCCGGGACCACCGTCCACAGATCCACCTACC AGAACCACAGCACAGAGACACCAAGCCTGACAGCTGCAGTCCCAAGCTCAGTTAGTGTCCCCAGGGCTCCCAGCATCAGCCCGTCTACCC TAAGCCCTGCAACCAGCAACCACTCCCAGCACTATGCAAATGAAGACAGTAAGATGGGCTCAACAGTCACTGCCGCTGTTATCGGGATCA TCGTGCCCATAGTGGTGATAGCCCTCCTGTGCATGAGTGGATACCTGATCTGGAGAAACTGGAAGCGGAAGAACACCAAAAGCATGAATT TTGACAACCCAGTCTACAGGAAAACAACAGAAGAAGAAGACGAAGATGAGCTCCATATAGGGAGAACTGCTCAGATTGGCCATGTCTATC CTGCAGCAATCAGCAGCTTTGATCGCCCACTGTGGGCAGAGCCCTGTCTTGGGGAGACCAGAGAACCGGAAGACCCAGCCCCTGCCCTCA AGGAGCTTTTTGTCTTGCCGGGGGAACCAAGGTCACAGCTGCACCAACTCCCGAAGAACCCTCTTTCCGAGCTGCCTGTCGTCAAATCCA AGCGAGTGGCATTAAGCCTTGAAGATGATGGACTACCCTGAGGATGGGATCACCCCCTTCGTGCCTCATGGAATTCAGTCCCATGCACTA CACTCTGGATGGTGTATGACTGGATGAATGGGTTTCTATATATGGGTCTGTGTGAGTGTATGTGTGTGTGTGATTTTTTTTTTAAATTTA TGTTGCGGAAAGGTAACCACAAAGTTATGATGAACTGCAAACATCCAAAGGATGTGAGAGTTTTTCTATGTATAATGTTTTATACACTTT TTAACTGGTTGCACTACCCATGAGGAATTCGTGGAATGGCTACTGCTGACTAACATGATGCACATAACCAAATGGGGGCCAATGGCACAG TACCTTACTCATCATTTAAAAACTATATTTACAGAAGATGTTTGGTTGCTGGGGGGGCTTTTTTAGGTTTTGGGGCATTTGTTTTTTGTA AATAAGATGATTATGCTTTGTGGCTATCCATCAACATAAGTAAAAAAAAAAAAAAAACACTTCAACTCCCTCCCCCATTTAGATTATTTA TTAACATATTTTAAAAATCAGATGAGTTCTATAAATAATTTAGAGAAGTGAGAGTATTTATTTTTGGCATGTTTGGCCCACCACACAGAC TCTGTGTGTGTATGTGTGTGTTTATATGTGTATGTGTGTGACAGAAAAATCTGTAGAGAAGAGGCACATCTATGGCTACTGTTCAAATAC ATAAAGATAAATTTATTTTCACACAGTCCACAAGGGGTATATCTTGTAGTTTTCAGAAAAGCCTTTGGAAATCTGGATCAGAAAATAGAT ACCATGGTTTGTGCAATTATGTAGTAAAAAAGGCAAATCTTTTCACCTCTGGCTATTCCTGAGACCCCAGGAAGTCAGGAAAAGCCTTTC AGCTCACCCATGGCTGCTGTGACTCCTACCAGGGCTTTCTTGGCTTTGGCGAAGGTCAGTGTACAGACATTCCATGGTACCAGAGTGCTC AGAAACTCAAGATAGGATATGCCTCACCCTCAGCTACTCCTTGTTTTAAAGTTCAGCTCTTTGAGTAACTTCTTCAATTTCTTTCAGGAC ACTTGGGTTGAATTCAGTAAGTTTCCTCTGAAGCACCCTGAAGGGTGCCATCCTTACAGAGCTAAGTGGAGACGTTTCCAGATCAGCCCA AGTTTACTATAGAGACTGGCCCAGGCACTGAATGTCTAGGACATGCTGTGGATGAAGATAAAGATGGTGGAATAGGTTTTATCACATCTC TTATTTCTCTTTTCCCCTTACTCTCTACCATTTCCTTTATGTGGGGAAACATTTTAAGGTAATAAATAGGTTACTTACCATCATATGTTC ATATAGATGAAACTAATTTTTGGCTTAAGTCAGAACAACTGGCCAAAATTGAAGTCATATTTGAGGGGGGAAATGGCATACGCAATATTA >36558_36558_1_HIVEP3-LRP8_HIVEP3_chr1_42041214_ENST00000372583_LRP8_chr1_53792664_ENST00000306052_length(amino acids)=1764AA_BP=1736 MDPEQSVKGTKKAEGSPRKRLTKGEAIQTSVSSSVPYPGSGTAATQESPAQELLAPQPFPGPSSVLREGSQEKTGQQQKPPKRPPIEASV HISQLPQHPLTPAFMSPGKPEHLLEGSTWQLVDPMRPGPSGSFVAPGLHPQSQLLPSHASIIPPEDLPGVPKVFVPRPSQVSLKPTEEAH KKERKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAHRIKAGLASGMGGEMYPHGLEMERIPG EEFEEPTEGESTDSEEETSATSGHPAELSPRPKQPLLSSGLYSSGSHSSSHERCSLSQSSTAQSLEDPPPFVEPSSEHPLSHKPEDTHTI KQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQVSPPNTNAKSYAEIIFGKCGRIGQRTAMLTATSTQPLLPLSTEDKPS LVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSMESPKSSLYREPLSSHSEKTKPEQSLLSLQHPPSTAPPVPLLRS HSMPSAACTISTPHHPFRGSYSFDDHITDSEALSHSSHVFTSHPRMLKRQPAIELPLGGEYSSEEPGPSSKDTASKPSDEVEPKESELTK KTKKGLKTKGVIYECNICGARYKKRDNYEAHKKYYCSELQIAKPISAGTHTSPEAEKSQIEHEPWSQMMHYKLGTTLELTPLRKRRKEKS LGDEEEPPAFESTKSQFGSPGPSDAARNLPLESTKSPAEPSKSVPSLEGPTGFQPRTPKPGSGSESGKERRTTSKEISVIQHTSSFEKSD SLEQPSGLEGEDKPLAQFPSPPPAPHGRSAHSLQPKLVRQPNIQVPEILVTEEPDRPDTEPEPPPKEPEKTEEFQWPQRSQTLAQLPAEK LPPKKKRLRLAEMAQSSGESSFESSVPLSRSPSQESNVSLSGSSRSASFERDDHGKAEAPSPSSDMRPKPLGTHMLTVPSHHPHAREMRR SASEQSPNVSHSAHMTETRSKSFDYGSLSLTGPSAPAPVAPPARVAPPERRKCFLVRQASLSRPPESELEVAPKGRQESEEPQPSSSKPS AKSSLSQISSAATSHGGPPGGKGPGQDRPPLGPTVPYTEALQVFHHPVAQTPLHEKPYLPPPVSLFSFQHLVQHEPGQSPEFFSTQAMSS LLSSPYSMPPLPPSLFQAPPLPLQPTVLHPGQLHLPQLMPHPANIPFRQPPSFLPMPYPTSSALSSGFFLPLQSQFALQLPGDVESHLPQ IKTSLAPLATGSAGLSPSTEYSSDIRLPPVAPPASSSAPTSAPPLALPACPDTMVSLVVPVRVQTNMPSYGSAMYTTLSQILVTQSQGSS ATVALPKFEEPPSKGTTVCGADVHEVGPGPSGLSEEQSRAFPTPYLRVPVTLPERKGTSLSSESILSLEGSSSTAGGSKRVLSPAGSLEL TMETQQQKRVKEEEASKADEKLELVKPCSVVLTSTEDGKRPEKSHLGNQGQGRRELEMLSSLSSDPSDTKEIPPLPHPALSHGTAPGSEA LKEYPQPSGKPHRRGLTPLSVKKEDSKEQPDLPSLAPPSSLPLSETSSRPAKSQEGTDSKKVLQFPSLHTTTNVSWCYLNYIKPNHIQHA DRRSSVYAGWCISLYNPNLPGVSTKAALSLLRSKQKVSKETYTMATAPHPEAGRLVPSSSRKPRMTEVHLPSLVSPEGQKDLARVEKEEE -------------------------------------------------------------- >36558_36558_2_HIVEP3-LRP8_HIVEP3_chr1_42041214_ENST00000372583_LRP8_chr1_53792664_ENST00000371454_length(transcript)=9149nt_BP=6093nt CCTGCCTGGCCGGAATAATTCATGAAGAAGGGGCTGGATCCGTGGGTCAGAGAACACAGGACCAGTTTGCCATCCCAAGGCCGAAGGCCT CCCTCCAACACAGTTCTCCAAGCTCTAGAAATCTCTGACACATCTTGACCATGAGACCACGGCTGGTTTTTGGCAGGATTCGAGGCACAA ACCCAGCAGCCTCAACCTAGTTCATGGAGGAGCCTCGCGGGGTCCTGGCCAAGCAAGCCCGCCCCTCTGGTGGGAAGAGCGGCGCCTAGG TGGAGGGTGGCTGCCGTAGGAGTGGACATGAATGCTGGCTTTCAGAGAGAACAGCGTTTCAGTTTTGGTCATCGGAAGTGGTGCCTTCAG CACAGAAGAAGAGCGTGATTTCTCCTCCAAGGCCGTTGATCTCCAACCCAGAACTAAAGGGGAGAAGAGCCACCCCCAGCATCCAGCGTG GCATCTCTTGTGCCAGGACCAGGGATGACTGGGCCATGGACACAGATGTCTCCAACCTTCAACCGTTTGCATAGCACACGGGGGACTCGT GGGGGCCACCTGCCACTGCCAGCTGAAACAATACAATGGCAATACTGACATCCTTCATGACGTTTTCCCGACAGACATTCAGGCAGAAAG TGCTGGTGCGTTTTCTGTCTGCAAAGTAGAGGGCCATGCCTCACCAATAGAATAGCGTGGGCCCTGATGACCTGCTCCGAGTCCACTCAC AGCCAGTGACACTTGCAAAAAACTCCCAAAGCCGTCTTGGGTTTGGCTCCCACAGCTCTTGACCAATGTGGCCAAAGCTGGACACCTCCT TGGGACACTGGGATTATTCATAAATGCAGCCCGCCCTGACTCTCCCTGAATAGCATCTGAAGTCTTTGTGAAGGTCATGGATCCTGAACA AAGTGTCAAGGGCACCAAGAAGGCTGAGGGAAGTCCCCGGAAGCGGCTGACCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCGT CCCATACCCAGGCAGCGGCACAGCTGCCACCCAAGAGAGCCCCGCCCAAGAGCTCTTAGCCCCGCAGCCCTTCCCGGGCCCCTCATCAGT TCTTAGGGAAGGCTCTCAGGAGAAAACGGGCCAGCAGCAGAAGCCCCCCAAAAGGCCCCCCATCGAAGCATCCGTCCACATCTCACAGCT TCCGCAGCACCCTCTGACACCAGCATTCATGTCGCCTGGCAAACCTGAGCATCTCCTGGAGGGGTCCACATGGCAACTGGTTGACCCCAT GAGACCTGGACCCTCTGGCTCCTTCGTGGCCCCTGGGCTCCATCCTCAGAGCCAGCTCCTTCCTTCCCACGCTTCCATCATTCCCCCCGA GGACCTTCCTGGAGTCCCCAAAGTCTTCGTGCCTCGTCCTTCCCAGGTCTCCTTGAAGCCCACAGAAGAGGCACACAAGAAGGAGAGGAA GCCCCAGAAGCCAGGCAAGTACATCTGCCAGTACTGCAGCCGGCCCTGTGCCAAGCCCAGCGTGCTCCAGAAGCACATTCGCTCACACAC AGGTGAGAGGCCCTACCCCTGCGGCCCCTGTGGCTTCTCCTTCAAGACCAAGAGTAATCTCTACAAGCACAGGAAGTCCCATGCCCACCG CATCAAAGCAGGCCTGGCCTCAGGCATGGGTGGCGAGATGTACCCACATGGGCTGGAGATGGAGCGGATCCCTGGGGAAGAGTTTGAGGA GCCCACTGAGGGAGAAAGCACAGATTCTGAAGAGGAGACTAGTGCCACCTCTGGTCACCCTGCAGAGCTCTCCCCAAGACCCAAGCAGCC CCTTCTCTCCAGCGGGCTATACAGCTCTGGGAGCCACAGTTCCAGCCACGAACGCTGTTCCCTGTCCCAGTCCAGCACAGCCCAGTCACT CGAAGACCCCCCTCCATTTGTGGAACCCTCATCTGAGCACCCCCTGAGCCATAAACCTGAAGACACCCACACGATTAAGCAGAAGCTGGC CCTCCGCTTAAGCGAGAGGAAGAAGGTGATCGATGAGCAGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGTCTGGGTATTTCTC TCGCTCCGAGAGTGCAGAGCAGCAGGTCAGCCCCCCAAACACCAACGCCAAGTCCTACGCTGAGATCATCTTTGGCAAGTGTGGGCGAAT AGGACAGCGGACCGCCATGCTGACAGCCACCTCCACCCAGCCCCTCCTGCCCCTGTCCACCGAAGACAAGCCCAGCCTGGTGCCTTTGTC TGTACCCCGGACGCAGGTGATCGAGCACATCACGAAGCTCATCACCATCAACGAGGCCGTGGTGGACACCAGCGAGATCGACAGCGTGAA GCCAAGGCGGAGCTCACTGTCCAGGCGCAGCAGCATGGAGTCCCCAAAATCCAGCCTCTACCGGGAGCCCCTGTCATCCCACAGTGAGAA AACCAAGCCTGAACAATCACTGCTGAGCCTCCAGCACCCGCCCAGTACCGCCCCCCCTGTGCCTCTCCTGAGAAGCCACTCAATGCCTTC TGCCGCCTGCACTATCAGCACCCCCCACCACCCCTTCCGAGGTAGCTACTCCTTCGATGACCATATCACCGACTCCGAAGCCCTGAGCCA CAGCAGTCACGTGTTTACCTCCCACCCCCGGATGCTGAAGCGCCAGCCGGCAATCGAATTACCTTTGGGAGGGGAATACAGTTCTGAGGA GCCTGGCCCAAGCAGCAAAGACACAGCCTCCAAGCCCTCGGACGAAGTGGAACCCAAGGAAAGCGAGCTTACCAAAAAGACCAAGAAGGG TTTGAAAACAAAAGGGGTGATCTACGAATGTAACATATGTGGTGCTCGGTACAAGAAAAGGGATAACTACGAAGCCCACAAAAAATACTA CTGCTCAGAGCTTCAGATCGCAAAGCCCATCTCTGCAGGCACCCACACATCTCCAGAAGCTGAAAAGAGTCAGATTGAGCATGAGCCGTG GTCCCAAATGATGCATTACAAACTGGGAACCACCCTGGAACTCACTCCACTGAGGAAGAGGAGGAAAGAGAAGAGCCTTGGGGACGAGGA AGAGCCACCTGCCTTTGAGTCCACAAAAAGTCAGTTTGGCAGCCCCGGGCCATCTGATGCTGCTCGGAACCTTCCCCTGGAGTCCACCAA GTCACCAGCAGAACCAAGTAAATCAGTGCCCTCCTTGGAGGGACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTTCAGA ATCAGGGAAGGAGAGGAGAACAACGTCCAAAGAAATTTCTGTCATCCAGCACACCAGCTCCTTTGAGAAATCTGATTCTCTCGAGCAGCC GAGTGGCTTGGAAGGGGAAGACAAACCTCTGGCCCAGTTCCCATCACCCCCACCTGCCCCACACGGACGCTCTGCTCACTCCCTGCAGCC TAAGTTGGTCCGCCAGCCCAACATTCAGGTTCCTGAGATCCTAGTAACTGAGGAGCCTGACCGGCCGGACACAGAGCCAGAGCCGCCCCC TAAGGAACCTGAGAAGACTGAGGAGTTCCAATGGCCCCAGCGCAGCCAGACACTTGCCCAGCTCCCAGCTGAGAAGCTGCCACCCAAAAA GAAGAGGTTGCGCCTGGCAGAGATGGCCCAATCATCAGGGGAGTCCAGCTTCGAGTCCTCTGTGCCTCTGTCTCGCAGCCCGAGCCAGGA AAGCAATGTCTCTTTGAGTGGGTCCAGCCGCTCAGCCTCGTTTGAGAGGGATGACCATGGGAAAGCCGAGGCCCCCAGTCCCTCATCTGA CATGCGCCCCAAACCCCTGGGCACCCACATGTTGACTGTCCCCAGCCACCACCCACATGCCCGAGAGATGCGGAGGTCAGCCTCAGAGCA GAGCCCCAACGTTTCCCATTCTGCCCACATGACCGAGACACGCAGCAAATCCTTTGACTATGGCAGCTTGTCCTTGACAGGCCCTTCTGC TCCAGCCCCAGTGGCTCCACCAGCGCGGGTGGCCCCGCCAGAGAGAAGAAAATGCTTCTTGGTGAGACAGGCCTCTCTGAGCAGGCCTCC AGAATCTGAGTTGGAGGTTGCCCCCAAGGGAAGACAGGAGAGCGAAGAACCACAGCCCTCATCCAGTAAACCCTCTGCCAAAAGCTCATT GTCCCAGATTTCCTCTGCGGCCACCTCACATGGTGGACCCCCGGGAGGCAAGGGCCCAGGGCAGGACAGGCCCCCATTGGGGCCCACTGT GCCCTACACAGAAGCACTGCAAGTGTTCCACCACCCCGTTGCCCAGACACCCCTGCATGAGAAGCCATACCTGCCCCCACCAGTCTCCCT TTTCTCCTTCCAGCATCTCGTGCAGCATGAGCCAGGACAGTCTCCAGAATTCTTCTCCACCCAGGCCATGTCCAGCCTCCTGTCCTCACC ATACTCCATGCCCCCACTTCCTCCCTCCTTATTTCAAGCCCCACCGCTTCCTCTCCAGCCTACTGTTCTGCACCCAGGCCAACTCCATCT CCCCCAGCTCATGCCTCACCCAGCCAACATCCCCTTCAGGCAGCCCCCTTCCTTCCTCCCCATGCCATACCCGACCTCCTCAGCACTGTC TTCTGGGTTTTTCCTGCCTCTGCAATCCCAGTTTGCACTTCAGCTCCCTGGTGATGTGGAAAGCCATCTGCCCCAGATCAAAACCAGCCT GGCCCCACTGGCAACAGGAAGTGCTGGCCTCTCCCCCAGCACAGAGTACAGCAGTGACATCCGGCTACCCCCTGTGGCTCCCCCAGCCAG CTCCTCAGCACCTACATCAGCTCCTCCACTGGCCCTGCCTGCCTGTCCAGACACCATGGTGTCCCTGGTTGTGCCTGTCCGTGTTCAGAC CAATATGCCGTCCTATGGGAGCGCAATGTACACCACCCTTTCCCAGATCTTGGTCACCCAGTCCCAAGGCAGCTCAGCAACTGTGGCACT TCCCAAGTTTGAGGAACCCCCATCAAAGGGGACGACTGTATGTGGTGCAGATGTGCATGAGGTTGGGCCCGGCCCTTCTGGGTTAAGTGA AGAGCAAAGCAGAGCTTTCCCAACTCCATACCTGAGAGTGCCTGTGACATTACCTGAAAGAAAAGGCACTTCCCTGTCATCAGAGAGTAT CTTGAGCCTGGAGGGGAGTTCATCAACAGCAGGGGGAAGCAAACGTGTCCTTTCACCAGCTGGCAGCCTTGAACTTACCATGGAAACCCA GCAGCAAAAAAGAGTGAAGGAGGAGGAGGCTTCCAAGGCAGATGAAAAACTTGAGCTGGTAAAACCATGCAGTGTGGTCCTTACCAGCAC CGAGGATGGGAAGAGGCCAGAGAAATCCCACTTAGGCAACCAGGGCCAAGGCAGGAGGGAGCTAGAAATGCTGTCCAGCCTGTCCTCAGA TCCATCTGACACAAAGGAAATTCCTCCCCTCCCTCACCCTGCATTGTCCCATGGGACAGCCCCAGGCTCAGAAGCTTTGAAGGAATATCC CCAGCCATCTGGCAAACCTCACCGAAGAGGGTTGACCCCACTGAGCGTGAAGAAAGAAGATTCCAAGGAACAACCTGATCTCCCCTCCTT GGCACCTCCGAGCTCTCTGCCTCTGTCAGAAACGTCCTCCAGACCAGCCAAGTCACAAGAAGGTACGGACTCAAAGAAGGTACTGCAGTT CCCCAGCCTCCACACAACCACTAATGTCAGTTGGTGCTATTTAAACTACATTAAGCCAAATCACATCCAGCATGCAGATAGGAGGTCCTC TGTTTACGCTGGTTGGTGCATAAGTTTGTACAACCCCAACCTTCCGGGGGTTTCCACTAAAGCTGCTTTGTCCCTCCTGAGGTCTAAGCA GAAAGTGAGCAAAGAGACATACACCATGGCCACAGCTCCGCATCCTGAGGCAGGAAGGCTTGTGCCATCCAGCTCCCGCAAGCCCCGCAT GACAGAGGTTCACCTCCCTTCACTGGTTTCCCCGGAAGGCCAGAAAGATCTAGCTAGAGTGGAGAAGGAAGAAGAGAGGAGAGGGGAGCC GGAGGAGGATGCTCCTGCCTCCCAGAGAGGGGAGCCGGCGAGGATCAAAATCTTCGAAGGAGGGGCCGGCCAAGGATTGCGAAAAGGACC AATTCCAGTGCCGGAACGAGCGCTGCATCCCCTCTGTGTGGAGATGCGACGAGGACGATGACTGCTTAGACCACAGCGACGAGGACGACT GCCCCAAGAAGACCTGTGCAGACAGTGACTTCACCTGTGACAACGGCCACTGCATCCACGAACGGTGGAAGTGTGACGGCGAGGAGGAGT GTCCTGATGGCTCCGATGAGTCCGAGGCCACTTGCACCAAGCAGGTGTGTCCTGCAGAGAAGCTGAGCTGTGGACCCACCAGCCACAAGT GTGTACCTGCCTCGTGGCGCTGCGACGGGGAGAAGGACTGCGAGGGTGGAGCGGATGAGGCCGGCTGTGCTACCTTGTGCGCCCCGCACG AGTTCCAGTGCGGCAACCGCTCGTGCCTGGCCGCCGTGTTCGTGTGCGACGGCGACGACGACTGTGGTGACGGCAGCGATGAGCGCGGCT GTGCAGACCCGGCCTGCGGGCCCCGCGAGTTCCGCTGCGGCGGCGATGGCGGCGGCGCCTGCATCCCGGAGCGCTGGGTCTGCGACCGCC AGTTTGACTGCGAGGACCGCTCGGACGAGGCAGCCGAGCTCTGCGGCCGTCCGGGCCCCGGGGCCACGTCCGCGCCCGCCGCCTGCGCCA CCGCCTCCCAGTTCGCCTGCCGCAGCGGCGAGTGCGTGCACCTGGGCTGGCGCTGCGACGGCGACCGCGACTGCAAAGACAAATCGGACG AGGCCGACTGCCCACTGGGCACCTGCCGTGGGGACGAGTTCCAGTGTGGGGATGGGACATGTGTCCTTGCAATCAAGCACTGCAACCAGG AGCAGGACTGTCCAGATGGGAGTGATGAAGCTGGCTGCCTACAGGGGCTGAACGAGTGTCTGCACAACAATGGCGGCTGCTCACACATCT GCACTGACCTCAAGATTGGCTTTGAATGCACGTGCCCAGCAGGCTTCCAGCTCCTGGACCAGAAGACCTGTGGCGACATTGATGAGTGCA AGGACCCAGATGCCTGCAGCCAGATCTGTGTCAATTACAAGGGCTATTTTAAGTGTGAGTGCTACCCTGGCTACGAGATGGACCTACTGA CCAAGAACTGCAAGGCTGCTGCTGGCAAGAGCCCATCCCTAATCTTCACCAACCGGCACGAGGTGCGGAGGATCGACCTGGTGAAGCGGA ACTATTCACGCCTCATCCCCATGCTCAAGAATGTCGTGGCACTAGATGTGGAAGTTGCCACCAATCGCATCTACTGGTGTGACCTCTCCT ACCGTAAGATCTATAGCGCCTACATGGACAAGGCCAGTGACCCGAAAGAGCAGGAGGTCCTCATTGACGAGCAGTTGCACTCTCCAGAGG GCCTGGCAGTGGACTGGGTCCACAAGCACATCTACTGGACTGACTCGGGCAATAAGACCATCTCAGTGGCCACAGTTGATGGTGGCCGCC GACGCACTCTCTTCAGCCGTAACCTCAGTGAACCCCGGGCCATCGCTGTTGACCCCCTGCGAGGGTTCATGTATTGGTCTGACTGGGGGG ACCAGGCCAAGATTGAGAAATCTGGGCTCAACGGTGTGGACCGGCAAACACTGGTGTCAGACAATATTGAATGGCCCAACGGAATCACCC TGGATCTGCTGAGCCAGCGCTTGTACTGGGTAGACTCCAAGCTACACCAACTGTCCAGCATTGACTTCAGTGGAGGCAACAGAAAGACGC TGATCTCCTCCACTGACTTCCTGAGCCACCCTTTTGGGATAGCTGTGTTTGAGGACAAGGTGTTCTGGACAGACCTGGAGAACGAGGCCA TTTTCAGTGCAAATCGGCTCAATGGCCTGGAAATCTCCATCCTGGCTGAGAACCTCAACAACCCACATGACATTGTCATCTTCCATGAGC TGAAGCAGCCAAGAGCTCCAGATGCCTGTGAGCTGAGTGTCCAGCCTAATGGAGGCTGTGAATACCTGTGCCTTCCTGCTCCTCAGATCT CCAGCCACTCTCCCAAGTACACATGTGCCTGTCCTGACACAATGTGGCTGGGTCCAGACATGAAGAGGTGCTACCGAGCACCTCAATCTA CCTCAACTACGACGTTAGCTTCTACCATGACGAGGACAGTACCTGCCACCACAAGAGCCCCCGGGACCACCGTCCACAGATCCACCTACC AGAACCACAGCACAGAGACACCAAGCCTGACAGCTGCAGTCCCAAGCTCAGTTAGTGTCCCCAGGGCTCCCAGCATCAGCCCGTCTACCC TAAGCCCTGCAACCAGCAACCACTCCCAGCACTATGCAAATGAAGACAGTAAGATGGGCTCAACAGTCACTGCCGCTGTTATCGGGATCA TCGTGCCCATAGTGGTGATAGCCCTCCTGTGCATGAGTGGATACCTGATCTGGAGAAACTGGAAGCGGAAGAACACCAAAAGCATGAATT TTGACAACCCAGTCTACAGGAAAACAACAGAAGAAGAAGACGAAGATGAGCTCCATATAGGGAGAACTGCTCAGATTGGCCATGTCTATC CTGCACGAGTGGCATTAAGCCTTGAAGATGATGGACTACCCTGAGGATGGGATCACCCCCTTCGTGCCTCATGGAATTCAGTCCCATGCA CTACACTCTGGATGGTGTATGACTGGATGAATGGGTTTCTATATATGGGTCTGTGTGAGTGTATGTGTGTGTGTGATTTTTTTTTTAAAT TTATGTTGCGGAAAGGTAACCACAAAGTTATGATGAACTGCAAACATCCAAAGGATGTGAGAGTTTTTCTATGTATAATGTTTTATACAC TTTTTAACTGGTTGCACTACCCATGAGGAATTCGTGGAATGGCTACTGCTGACTAACATGATGCACATAACCAAATGGGGGCCAATGGCA CAGTACCTTACTCATCATTTAAAAACTATATTTACAGAAGATGTTTGGTTGCTGGGGGGGCTTTTTTAGGTTTTGGGGCATTTGTTTTTT >36558_36558_2_HIVEP3-LRP8_HIVEP3_chr1_42041214_ENST00000372583_LRP8_chr1_53792664_ENST00000371454_length(amino acids)=1764AA_BP=1736 MDPEQSVKGTKKAEGSPRKRLTKGEAIQTSVSSSVPYPGSGTAATQESPAQELLAPQPFPGPSSVLREGSQEKTGQQQKPPKRPPIEASV HISQLPQHPLTPAFMSPGKPEHLLEGSTWQLVDPMRPGPSGSFVAPGLHPQSQLLPSHASIIPPEDLPGVPKVFVPRPSQVSLKPTEEAH KKERKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAHRIKAGLASGMGGEMYPHGLEMERIPG EEFEEPTEGESTDSEEETSATSGHPAELSPRPKQPLLSSGLYSSGSHSSSHERCSLSQSSTAQSLEDPPPFVEPSSEHPLSHKPEDTHTI KQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQVSPPNTNAKSYAEIIFGKCGRIGQRTAMLTATSTQPLLPLSTEDKPS LVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSMESPKSSLYREPLSSHSEKTKPEQSLLSLQHPPSTAPPVPLLRS HSMPSAACTISTPHHPFRGSYSFDDHITDSEALSHSSHVFTSHPRMLKRQPAIELPLGGEYSSEEPGPSSKDTASKPSDEVEPKESELTK KTKKGLKTKGVIYECNICGARYKKRDNYEAHKKYYCSELQIAKPISAGTHTSPEAEKSQIEHEPWSQMMHYKLGTTLELTPLRKRRKEKS LGDEEEPPAFESTKSQFGSPGPSDAARNLPLESTKSPAEPSKSVPSLEGPTGFQPRTPKPGSGSESGKERRTTSKEISVIQHTSSFEKSD SLEQPSGLEGEDKPLAQFPSPPPAPHGRSAHSLQPKLVRQPNIQVPEILVTEEPDRPDTEPEPPPKEPEKTEEFQWPQRSQTLAQLPAEK LPPKKKRLRLAEMAQSSGESSFESSVPLSRSPSQESNVSLSGSSRSASFERDDHGKAEAPSPSSDMRPKPLGTHMLTVPSHHPHAREMRR SASEQSPNVSHSAHMTETRSKSFDYGSLSLTGPSAPAPVAPPARVAPPERRKCFLVRQASLSRPPESELEVAPKGRQESEEPQPSSSKPS AKSSLSQISSAATSHGGPPGGKGPGQDRPPLGPTVPYTEALQVFHHPVAQTPLHEKPYLPPPVSLFSFQHLVQHEPGQSPEFFSTQAMSS LLSSPYSMPPLPPSLFQAPPLPLQPTVLHPGQLHLPQLMPHPANIPFRQPPSFLPMPYPTSSALSSGFFLPLQSQFALQLPGDVESHLPQ IKTSLAPLATGSAGLSPSTEYSSDIRLPPVAPPASSSAPTSAPPLALPACPDTMVSLVVPVRVQTNMPSYGSAMYTTLSQILVTQSQGSS ATVALPKFEEPPSKGTTVCGADVHEVGPGPSGLSEEQSRAFPTPYLRVPVTLPERKGTSLSSESILSLEGSSSTAGGSKRVLSPAGSLEL TMETQQQKRVKEEEASKADEKLELVKPCSVVLTSTEDGKRPEKSHLGNQGQGRRELEMLSSLSSDPSDTKEIPPLPHPALSHGTAPGSEA LKEYPQPSGKPHRRGLTPLSVKKEDSKEQPDLPSLAPPSSLPLSETSSRPAKSQEGTDSKKVLQFPSLHTTTNVSWCYLNYIKPNHIQHA DRRSSVYAGWCISLYNPNLPGVSTKAALSLLRSKQKVSKETYTMATAPHPEAGRLVPSSSRKPRMTEVHLPSLVSPEGQKDLARVEKEEE -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for HIVEP3-LRP8 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for HIVEP3-LRP8 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for HIVEP3-LRP8 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |