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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:LAMC2-NMNAT2 (FusionGDB2 ID:43970) |
Fusion Gene Summary for LAMC2-NMNAT2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: LAMC2-NMNAT2 | Fusion gene ID: 43970 | Hgene | Tgene | Gene symbol | LAMC2 | NMNAT2 | Gene ID | 3918 | 23057 |
Gene name | laminin subunit gamma 2 | nicotinamide nucleotide adenylyltransferase 2 | |
Synonyms | B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2 | C1orf15|PNAT2 | |
Cytomap | 1q25.3 | 1q25.3 | |
Type of gene | protein-coding | protein-coding | |
Description | laminin subunit gamma-2BM600-100kDaCSF 140 kDa subunitcell-scattering factor 140 kDa subunitepiligrin subunit gammakalinin subunit gammaladsin 140 kDa subunitlaminin B2t chainlaminin, gamma 2large adhesive scatter factor 140 kDa subunitnicein su | nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2NMN adenylyltransferase 2NMN/NaMN adenylyltransferase 2NaMN adenylyltransferase 2nicotinamide mononucleotide adenylyltransferase 2nicotinate-nucleotide adenylyltransferase 2pyridine nuc | |
Modification date | 20200315 | 20200313 | |
UniProtAcc | Q13753 | Q9BZQ4 | |
Ensembl transtripts involved in fusion gene | ENST00000264144, ENST00000493293, ENST00000461729, | ENST00000473046, ENST00000287713, ENST00000294868, | |
Fusion gene scores | * DoF score | 9 X 9 X 6=486 | 8 X 8 X 5=320 |
# samples | 9 | 11 | |
** MAII score | log2(9/486*10)=-2.43295940727611 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(11/320*10)=-1.5405683813627 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: LAMC2 [Title/Abstract] AND NMNAT2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | LAMC2(183155566)-NMNAT2(183262928), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across LAMC2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across NMNAT2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | UCEC | TCGA-EY-A3QX-01A | LAMC2 | chr1 | 183155566 | - | NMNAT2 | chr1 | 183262928 | - |
ChimerDB4 | UCEC | TCGA-EY-A3QX-01A | LAMC2 | chr1 | 183155566 | + | NMNAT2 | chr1 | 183262928 | - |
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Fusion Gene ORF analysis for LAMC2-NMNAT2 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000264144 | ENST00000473046 | LAMC2 | chr1 | 183155566 | + | NMNAT2 | chr1 | 183262928 | - |
5CDS-intron | ENST00000493293 | ENST00000473046 | LAMC2 | chr1 | 183155566 | + | NMNAT2 | chr1 | 183262928 | - |
In-frame | ENST00000264144 | ENST00000287713 | LAMC2 | chr1 | 183155566 | + | NMNAT2 | chr1 | 183262928 | - |
In-frame | ENST00000264144 | ENST00000294868 | LAMC2 | chr1 | 183155566 | + | NMNAT2 | chr1 | 183262928 | - |
In-frame | ENST00000493293 | ENST00000287713 | LAMC2 | chr1 | 183155566 | + | NMNAT2 | chr1 | 183262928 | - |
In-frame | ENST00000493293 | ENST00000294868 | LAMC2 | chr1 | 183155566 | + | NMNAT2 | chr1 | 183262928 | - |
intron-3CDS | ENST00000461729 | ENST00000287713 | LAMC2 | chr1 | 183155566 | + | NMNAT2 | chr1 | 183262928 | - |
intron-3CDS | ENST00000461729 | ENST00000294868 | LAMC2 | chr1 | 183155566 | + | NMNAT2 | chr1 | 183262928 | - |
intron-intron | ENST00000461729 | ENST00000473046 | LAMC2 | chr1 | 183155566 | + | NMNAT2 | chr1 | 183262928 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000493293 | LAMC2 | chr1 | 183155566 | + | ENST00000294868 | NMNAT2 | chr1 | 183262928 | - | 5437 | 194 | 115 | 1032 | 305 |
ENST00000493293 | LAMC2 | chr1 | 183155566 | + | ENST00000287713 | NMNAT2 | chr1 | 183262928 | - | 5437 | 194 | 115 | 1032 | 305 |
ENST00000264144 | LAMC2 | chr1 | 183155566 | + | ENST00000294868 | NMNAT2 | chr1 | 183262928 | - | 5387 | 144 | 65 | 982 | 305 |
ENST00000264144 | LAMC2 | chr1 | 183155566 | + | ENST00000287713 | NMNAT2 | chr1 | 183262928 | - | 5387 | 144 | 65 | 982 | 305 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000493293 | ENST00000294868 | LAMC2 | chr1 | 183155566 | + | NMNAT2 | chr1 | 183262928 | - | 0.000713429 | 0.9992866 |
ENST00000493293 | ENST00000287713 | LAMC2 | chr1 | 183155566 | + | NMNAT2 | chr1 | 183262928 | - | 0.000713429 | 0.9992866 |
ENST00000264144 | ENST00000294868 | LAMC2 | chr1 | 183155566 | + | NMNAT2 | chr1 | 183262928 | - | 0.000678099 | 0.99932194 |
ENST00000264144 | ENST00000287713 | LAMC2 | chr1 | 183155566 | + | NMNAT2 | chr1 | 183262928 | - | 0.000678099 | 0.99932194 |
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Fusion Genomic Features for LAMC2-NMNAT2 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for LAMC2-NMNAT2 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:183155566/chr1:183262928) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
LAMC2 | NMNAT2 |
FUNCTION: Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components. Ladsin exerts cell-scattering activity toward a wide variety of cells, including epithelial, endothelial, and fibroblastic cells. {ECO:0000269|PubMed:8265624}. | FUNCTION: Nicotinamide/nicotinate-nucleotide adenylyltransferase that acts as an axon maintenance factor (By similarity). Catalyzes the formation of NAD(+) from nicotinamide mononucleotide (NMN) and ATP (PubMed:16118205, PubMed:17402747). Can also use the deamidated form; nicotinic acid mononucleotide (NaMN) as substrate but with a lower efficiency (PubMed:16118205, PubMed:17402747). Cannot use triazofurin monophosphate (TrMP) as substrate (PubMed:16118205, PubMed:17402747). Also catalyzes the reverse reaction, i.e. the pyrophosphorolytic cleavage of NAD(+) (PubMed:16118205, PubMed:17402747). For the pyrophosphorolytic activity prefers NAD(+), NADH and NaAD as substrates and degrades nicotinic acid adenine dinucleotide phosphate (NHD) less effectively (PubMed:16118205, PubMed:17402747). Fails to cleave phosphorylated dinucleotides NADP(+), NADPH and NaADP(+) (PubMed:16118205, PubMed:17402747). Axon survival factor required for the maintenance of healthy axons: acts by delaying Wallerian axon degeneration, an evolutionarily conserved process that drives the loss of damaged axons (By similarity). {ECO:0000250|UniProtKB:Q8BNJ3, ECO:0000269|PubMed:16118205, ECO:0000269|PubMed:17402747}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | NMNAT2 | chr1:183155566 | chr1:183262928 | ENST00000287713 | 0 | 11 | 200_202 | 28 | 308.0 | Nucleotide binding | ATP | |
Tgene | NMNAT2 | chr1:183155566 | chr1:183262928 | ENST00000287713 | 0 | 11 | 271_274 | 28 | 308.0 | Nucleotide binding | ATP | |
Tgene | NMNAT2 | chr1:183155566 | chr1:183262928 | ENST00000294868 | 0 | 11 | 200_202 | 23 | 303.0 | Nucleotide binding | ATP | |
Tgene | NMNAT2 | chr1:183155566 | chr1:183262928 | ENST00000294868 | 0 | 11 | 271_274 | 23 | 303.0 | Nucleotide binding | ATP | |
Tgene | NMNAT2 | chr1:183155566 | chr1:183262928 | ENST00000287713 | 0 | 11 | 212_213 | 28 | 308.0 | Region | Substrate binding | |
Tgene | NMNAT2 | chr1:183155566 | chr1:183262928 | ENST00000287713 | 0 | 11 | 55_57 | 28 | 308.0 | Region | Substrate binding | |
Tgene | NMNAT2 | chr1:183155566 | chr1:183262928 | ENST00000287713 | 0 | 11 | 92_95 | 28 | 308.0 | Region | Substrate binding | |
Tgene | NMNAT2 | chr1:183155566 | chr1:183262928 | ENST00000294868 | 0 | 11 | 212_213 | 23 | 303.0 | Region | Substrate binding | |
Tgene | NMNAT2 | chr1:183155566 | chr1:183262928 | ENST00000294868 | 0 | 11 | 55_57 | 23 | 303.0 | Region | Substrate binding | |
Tgene | NMNAT2 | chr1:183155566 | chr1:183262928 | ENST00000294868 | 0 | 11 | 92_95 | 23 | 303.0 | Region | Substrate binding |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000264144 | + | 1 | 23 | 1117_1193 | 26 | 1194.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000264144 | + | 1 | 23 | 611_718 | 26 | 1194.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000264144 | + | 1 | 23 | 811_1076 | 26 | 1194.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000493293 | + | 1 | 22 | 1117_1193 | 26 | 1112.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000493293 | + | 1 | 22 | 611_718 | 26 | 1112.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000493293 | + | 1 | 22 | 811_1076 | 26 | 1112.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000264144 | + | 1 | 23 | 139_186 | 26 | 1194.0 | Domain | Laminin EGF-like 3 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000264144 | + | 1 | 23 | 187_196 | 26 | 1194.0 | Domain | Laminin EGF-like 4%3B first part |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000264144 | + | 1 | 23 | 213_381 | 26 | 1194.0 | Domain | Laminin IV type A |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000264144 | + | 1 | 23 | 28_83 | 26 | 1194.0 | Domain | Laminin EGF-like 1 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000264144 | + | 1 | 23 | 382_415 | 26 | 1194.0 | Domain | Laminin EGF-like 4%3B second part |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000264144 | + | 1 | 23 | 416_461 | 26 | 1194.0 | Domain | Laminin EGF-like 5 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000264144 | + | 1 | 23 | 462_516 | 26 | 1194.0 | Domain | Laminin EGF-like 6 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000264144 | + | 1 | 23 | 517_572 | 26 | 1194.0 | Domain | Laminin EGF-like 7 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000264144 | + | 1 | 23 | 573_602 | 26 | 1194.0 | Domain | Laminin EGF-like 8%3B truncated |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000264144 | + | 1 | 23 | 84_130 | 26 | 1194.0 | Domain | Laminin EGF-like 2 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000493293 | + | 1 | 22 | 139_186 | 26 | 1112.0 | Domain | Laminin EGF-like 3 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000493293 | + | 1 | 22 | 187_196 | 26 | 1112.0 | Domain | Laminin EGF-like 4%3B first part |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000493293 | + | 1 | 22 | 213_381 | 26 | 1112.0 | Domain | Laminin IV type A |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000493293 | + | 1 | 22 | 28_83 | 26 | 1112.0 | Domain | Laminin EGF-like 1 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000493293 | + | 1 | 22 | 382_415 | 26 | 1112.0 | Domain | Laminin EGF-like 4%3B second part |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000493293 | + | 1 | 22 | 416_461 | 26 | 1112.0 | Domain | Laminin EGF-like 5 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000493293 | + | 1 | 22 | 462_516 | 26 | 1112.0 | Domain | Laminin EGF-like 6 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000493293 | + | 1 | 22 | 517_572 | 26 | 1112.0 | Domain | Laminin EGF-like 7 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000493293 | + | 1 | 22 | 573_602 | 26 | 1112.0 | Domain | Laminin EGF-like 8%3B truncated |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000493293 | + | 1 | 22 | 84_130 | 26 | 1112.0 | Domain | Laminin EGF-like 2 |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000264144 | + | 1 | 23 | 603_1193 | 26 | 1194.0 | Region | Note=Domain II and I |
Hgene | LAMC2 | chr1:183155566 | chr1:183262928 | ENST00000493293 | + | 1 | 22 | 603_1193 | 26 | 1112.0 | Region | Note=Domain II and I |
Tgene | NMNAT2 | chr1:183155566 | chr1:183262928 | ENST00000287713 | 0 | 11 | 15_17 | 28 | 308.0 | Nucleotide binding | ATP | |
Tgene | NMNAT2 | chr1:183155566 | chr1:183262928 | ENST00000294868 | 0 | 11 | 15_17 | 23 | 303.0 | Nucleotide binding | ATP |
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Fusion Gene Sequence for LAMC2-NMNAT2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>43970_43970_1_LAMC2-NMNAT2_LAMC2_chr1_183155566_ENST00000264144_NMNAT2_chr1_183262928_ENST00000287713_length(transcript)=5387nt_BP=144nt ACCAACCGAGGCGCCGGGCAGCGACCCCTGCAGCGGAGACAGAGACTGAGCGGCCCGGCCCCGCCATGCCTGCGCTCTGGCTGGGCTGCT GCCTCTGCTTCTCGCTCCTCCTGCCCGCAGCCCGGGCCACCTCCAGGAGGGAAGAAAGAGCCAGGGATTATCTGCACAAAACTGGAAGGT TTATTGTGATTGGCGGGATTGTCTCCCCTGTCCACGACTCCTATGGAAAACAGGGCCTCGTGTCAAGCCGGCACCGTCTCATCATGTGTC AGCTGGCCGTCCAGAATTCTGATTGGATCAGGGTGGACCCTTGGGAGTGCTACCAGGACACCTGGCAGACGACCTGCAGCGTGTTGGAAC ACCACCGGGACCTCATGAAGAGGGTGACTGGCTGCATCCTCTCCAATGTCAACACACCTTCCATGACACCTGTGATCGGACAGCCACAAA ACGAGACCCCCCAGCCCATTTACCAGAACAGCAACGTGGCCACCAAGCCCACTGCAGCCAAGATCTTGGGGAAGGTGGGAGAAAGCCTCA GCCGGATCTGCTGTGTCCGCCCGCCGGTGGAGCGTTTCACCTTTGTAGATGAGAATGCCAATCTGGGCACGGTGATGCGGTATGAAGAGA TTGAGCTACGGATCCTGCTGCTGTGTGGTAGTGACCTGCTGGAGTCCTTCTGCATCCCAGGGCTCTGGAACGAGGCAGATATGGAGGTGA TTGTTGGTGACTTTGGGATTGTGGTGGTGCCCCGGGATGCAGCCGACACAGACCGAATCATGAATCACTCCTCAATACTCCGCAAATACA AAAACAACATCATGGTGGTGAAGGATGACATCAACCATCCCATGTCTGTTGTCAGCTCAACCAAGAGCAGGCTGGCCCTGCAGCATGGGG ACGGCCATGTTGTGGATTACCTGTCCCAGCCGGTCATCGACTACATCCTCAAAAGCCAGCTGTACATCAATGCCTCCGGCTAGCAGCCCC TCGTCCTCCGGCAACACAATGGCCCCTCCATCTTTGTCAGCCCCCTGTTTCTCTCCTGCCTCTCTGTTTCTCCATCTCCTCGTCTTGACT GTTTTCCCTACTTGCTGACTTAACCCCCCATAGTGTGGGGGACCTGCAGAGAACCATGGCATTCCCTATTCCACAGTCATCTTTGGACAG ACTTTCCTCTAGTCTCCGGGTTGGGGGTGGGTGAGGGAATGGGGTGGGAGTCGGGGGAAGTGCAGTCCTTGGAGATGTACTGGTGTCCGT CTCCCAGCATGCTCTAGAGAGGCGGCTCTGGTGCCCATCCTCCCAGCACGCTCTGGGGAGGCGGCTCTGGTGCCCATCCTCCCAGCATGC TCTAGAGAGGCGGCTCTGGTGCCCCTCCTCCCAGCATGCTCTGGGGAGGCGGCTCTGGCTCTTGCCTTCCCAGCATGCCCTTTACTACAA AGGGCTATTTTTCTTTTCTTTCTTTTGTTTATTTATTTTTCTTTGTTCACTCCCTGTAGAACTTGGATGAAATCAGTGTCCATGGTTCTT TATGTTTGTAGTCTTGATGTGCTCCTGTGGTATTACTTCCCCTCTGATAGGACATTGTAGCCAGCCTCAGCACTCAGTGAGTTCATCAGG GCCACACCCAGTAGAGAAGGCCAAGCAACCTCCACTTCTTCAGCACCACACACACGCACACACACACACACGCACACATGCGTGTGCACC CGCGCACGCACATACACACACACATATAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAACCTTTGATCAGGAGTGAGATTTTCGGGTTCT GAAACCTGGGACACGAGTCTGTGAATAGTCGGTTTTCTCAGAATAATTTGAATCTGTTTTCTTAGTTTCAAATGACCATTTCCCTGATGC TCTGAGCTTATGATCACACAGAGCCAGTCCATCCTCATTTCCTGGTGGCATCTGTTCATTTACCTTTGTGGACTGTAGCTGATGGCACAG TGCGGGTTCCCTACCAGCCAGGGGTTTCCAAGGGACCTTTGGAGGCCATGCTTAGACACATTCCTGTACCTGAGAACAACCACATAGGCA GGACCAGATCCACATCGTGCAGTCGTGTCATAAAAAAACAAAACAAAACAAAAAAACACTAGGAGTCCACTCAACCCTGGAGGTCTTTGC TAATTGGAATTATGTATTGTCTGTTGGGCTGGGAAATGTCTCTTTCATATTGTAAGTCCAGGATGAACTAGGAGAAAGCAATTTGTTGCC CTGATGATAACTGATGATTTTCACCCTCTCTAGCTGAGGTAACTCAGACAGTGCATGAGGTCAGTTTCTTCTTGAGAAGCAGTGCCTTGG TCTTGTTTCTGTGGTTGGTTCTAGCCCCTGCAGAGCCTGGGAGCTGCAGGAACTGTCTGAGAAAATCTCCCTAATAGGGGAGTGGGTTCC CAGAAGGGAGATCTGGGAGGGGTCAGGAGCCACTAAGTTGCTTCACTCCTTTTTTCTCTAATTTTCTACCTTCCTCTCTGTTCCTGCAGA CAGTTTTGCCAGCTTTGCTTCTGGTTACTAGGGTCTCATGCGTGTCCTGCTTGGAGAGCCATAAGGAAATTGCTGTCTTGTGCTTTGTGT CTCTCATCCAGTCTCTGGCTCTTGGGATTCTGGTCTTTGAGAAATAGTCCCTGAGTATTAGGATACTTTTATCAAAATCTAGTACCAGCT ACGGCCAGAAAGGGCCAGGTGGGACCTGAAAGCAAAGACAATGTTCTTTACCACACGTTTCACATCTGCAACATCCTTCAATTGCGGGAA AAGGAACTTGATTTAACAGAAGAACATGGTAGAGCAGCATCCAGAAAGTCTGTTATTCCTCTTGGATTTTTTGAAATAATCTTCAGAGGA AGGAAGGAAAATCCTATTTTGGGGTATCAGTGTTTGACTAGGGATCATGAAATAATAAACTGAAAAAAACTTTAGAGTTCAGTTGATCCA ACACTTTCCTTTAAAAGTTGAGGGAGCAGAGGCCCATGGGATTAAATGGCTGGTCCAGGTCAGCCAGCAGGTGTAGGGCCTGACAAGAAC ATATTGTTTCCCTGACCCCTAGGCCGTCACACCACACCCTCCATTTCCTCATGTTGCTGACCAGGTGCCCATATGATTTCTACACTTCCC AAGCCTTACCCTGGCATCTTTCTTTTAAATTATATCTGTCCCAGGTGCTCTCCACACATAGGATGGTAATGCCAGTCCCAGGGGAGGGTG TGATAGTAAGGAAGGCCACTGTTAGGTTTCCTTTAGAAATAAAGAGATCTCAGCAGCTTGGAAGAAATCCCAGAAGCGGACTCCATCAAT CCAAGAAAGAGTTGCTTTGTGGAAGGTGAAGGAAGACCCACAGAGTGCTCAGGATGATGCTATTGCTGGAGAGCGAAAGATGGAACAGCC TTGTCCAGGCAGAACAGTCATAAGCCAGGAAATGAAACAAAGGAAAACAGGTGCCTGAATTTCCTGGGGAAACATGGCTTGTTTAAGGAC TTGGAGTTATGGATGGAATTTATGGGACCCACGTGAGCAGACCTGAGGAAGGCTCGATTTCTTTTGTTTCTTGGTCCACTCTGTCACTCT GCTCTGGTCAAGCCCCATTTGGTCTACAGCCCATGAGAAGGAATGAGGCTGGTTCTGCACTCTCAGCATGCAGTCCGAAAGCATGTGGGA GTGGGGAGGGAAAGTGAGATGAATTAAGACAAAGAACAGGTGCCATAGAAGTAGATTTCTAGGAATGAAGTGGGGCAGATCTTATCTTTG TGGATTACAGGCACTGTACTAAAAACAGGTTTCCTATTTAATATAAAAAGAAAGTGAATCTTCTTTTGGATAGAATCATCCATTCCCATC GCCGCACCCCCTACCCCCCAAACACACACACACACACACACACACACACACACACACACACACACACACACGCCCTACTCTTCATTTGCT AGGGGAAGGTCACAGCACAACTAAATCCAGGACAGGACATTGTGACCATGACCCAGCCACAGTCAATACCAGAAAGATGATTCAGAGTCT GAAGTGGTGCCCCAGGTGCCAACAGGATAACCTCTACCCCCCGACTTTGTCTCTGGGGTCCTGTTCCTTCCTGCAAAGCCCAATCCAAGA CTGGCATGGCTCAGAGGTTGTGAGAAAGGCATGGACTGGAACAATCATGTCCAGAGGGGTCTGGAGCTTTGTTTCCTGTTCACCAGCAAA AAATGTCTCTCCCATTTTTCTGAAAGTGGCTGATGTAAGAACAGGCAGAAGGAAAACCCTTTTTGTCAATAACTCTGTCCTTAAGGAATG GTCCTCTGGGAGGGCTGTGCTGCTAGTGGGTACCTCAGTCACACACCCCCAACCCCAGGCAGCCTCTAGAGCCTTCTTGCTTTCATTTTC CTTGAATGTACATAGGAACAAGGGGGAAAGTCTCTTACTGAAGTGCCTGAAACCCAAAGCTAGAGCTTCTAGAGACGCCGTTCTTCCTGT CTCAGCTTGGCCAGCCTTTCAACAATGTTCTCTAGTTTCAAGCTCCAGCTTCTCAGAAAGAATTAAAGAACTTGCTGTTCAAATTAAGTA GAAAGTGAGACTCAATAATAACTGAACTACAGCAAAAGGCAGAGAATTACAGGGAGAAAAAACTTGTACTTACCAGCCCAATTCTACTCT CCTCAAACTGACACACACACACACACACACACACACACACACACACACACACTCTTTTAGGGGACTAAGAGAGAGAAGCATGTTATTACA TTTTACTCATCCAAACAGTAATGCAAAAATAAAACGGTAGAATATGAAAAGCTCAGGATCTCTCCCAAGGCTACCTACTGCAGGAGGGCC AACAGGTGAGATGGGAAGAATGGAAACAGGGACCGATTTTGTAGCTCATACAATTAGGACACCTTAGGAATAGCATTGTAGTAATGGTGA TGAATATGCTCTGCCAAATTCATCCAGTCTGCACCATCTTATAGCTGCCCAGCACACTCGACTGTTCATGTGGTCTCTTTGTAGTGTGAG TTTGGAGTGTCCTATTAGCCTGTTCTGGTTAGGAATGAGTTAACGGCTCTTTCCCTCAACCTTAGTCTAGTCCCAGGGCTGAGGATTCAG CTGGATCCACATGGTCTTGAGGGTTGGCATGAGGAGGGGGAAGCTTTTTTGAATCGCTTTTTGATCACATAATCTGCCATTTTAAGAGTA AGATTTGCTTTATGGAAATCAATTCATTAATAAAAAATGATATTCAAGTTGCAATACCATTTCACAGTGAAATATTTTGAGTACAATTTT >43970_43970_1_LAMC2-NMNAT2_LAMC2_chr1_183155566_ENST00000264144_NMNAT2_chr1_183262928_ENST00000287713_length(amino acids)=305AA_BP=26 MPALWLGCCLCFSLLLPAARATSRREERARDYLHKTGRFIVIGGIVSPVHDSYGKQGLVSSRHRLIMCQLAVQNSDWIRVDPWECYQDTW QTTCSVLEHHRDLMKRVTGCILSNVNTPSMTPVIGQPQNETPQPIYQNSNVATKPTAAKILGKVGESLSRICCVRPPVERFTFVDENANL GTVMRYEEIELRILLLCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRIMNHSSILRKYKNNIMVVKDDINHPMSVVSSTK -------------------------------------------------------------- >43970_43970_2_LAMC2-NMNAT2_LAMC2_chr1_183155566_ENST00000264144_NMNAT2_chr1_183262928_ENST00000294868_length(transcript)=5387nt_BP=144nt ACCAACCGAGGCGCCGGGCAGCGACCCCTGCAGCGGAGACAGAGACTGAGCGGCCCGGCCCCGCCATGCCTGCGCTCTGGCTGGGCTGCT GCCTCTGCTTCTCGCTCCTCCTGCCCGCAGCCCGGGCCACCTCCAGGAGGGAAGAAAGAGCCAGGGATTATCTGCACAAAACTGGAAGGT TTATTGTGATTGGCGGGATTGTCTCCCCTGTCCACGACTCCTATGGAAAACAGGGCCTCGTGTCAAGCCGGCACCGTCTCATCATGTGTC AGCTGGCCGTCCAGAATTCTGATTGGATCAGGGTGGACCCTTGGGAGTGCTACCAGGACACCTGGCAGACGACCTGCAGCGTGTTGGAAC ACCACCGGGACCTCATGAAGAGGGTGACTGGCTGCATCCTCTCCAATGTCAACACACCTTCCATGACACCTGTGATCGGACAGCCACAAA ACGAGACCCCCCAGCCCATTTACCAGAACAGCAACGTGGCCACCAAGCCCACTGCAGCCAAGATCTTGGGGAAGGTGGGAGAAAGCCTCA GCCGGATCTGCTGTGTCCGCCCGCCGGTGGAGCGTTTCACCTTTGTAGATGAGAATGCCAATCTGGGCACGGTGATGCGGTATGAAGAGA TTGAGCTACGGATCCTGCTGCTGTGTGGTAGTGACCTGCTGGAGTCCTTCTGCATCCCAGGGCTCTGGAACGAGGCAGATATGGAGGTGA TTGTTGGTGACTTTGGGATTGTGGTGGTGCCCCGGGATGCAGCCGACACAGACCGAATCATGAATCACTCCTCAATACTCCGCAAATACA AAAACAACATCATGGTGGTGAAGGATGACATCAACCATCCCATGTCTGTTGTCAGCTCAACCAAGAGCAGGCTGGCCCTGCAGCATGGGG ACGGCCATGTTGTGGATTACCTGTCCCAGCCGGTCATCGACTACATCCTCAAAAGCCAGCTGTACATCAATGCCTCCGGCTAGCAGCCCC TCGTCCTCCGGCAACACAATGGCCCCTCCATCTTTGTCAGCCCCCTGTTTCTCTCCTGCCTCTCTGTTTCTCCATCTCCTCGTCTTGACT GTTTTCCCTACTTGCTGACTTAACCCCCCATAGTGTGGGGGACCTGCAGAGAACCATGGCATTCCCTATTCCACAGTCATCTTTGGACAG ACTTTCCTCTAGTCTCCGGGTTGGGGGTGGGTGAGGGAATGGGGTGGGAGTCGGGGGAAGTGCAGTCCTTGGAGATGTACTGGTGTCCGT CTCCCAGCATGCTCTAGAGAGGCGGCTCTGGTGCCCATCCTCCCAGCACGCTCTGGGGAGGCGGCTCTGGTGCCCATCCTCCCAGCATGC TCTAGAGAGGCGGCTCTGGTGCCCCTCCTCCCAGCATGCTCTGGGGAGGCGGCTCTGGCTCTTGCCTTCCCAGCATGCCCTTTACTACAA AGGGCTATTTTTCTTTTCTTTCTTTTGTTTATTTATTTTTCTTTGTTCACTCCCTGTAGAACTTGGATGAAATCAGTGTCCATGGTTCTT TATGTTTGTAGTCTTGATGTGCTCCTGTGGTATTACTTCCCCTCTGATAGGACATTGTAGCCAGCCTCAGCACTCAGTGAGTTCATCAGG GCCACACCCAGTAGAGAAGGCCAAGCAACCTCCACTTCTTCAGCACCACACACACGCACACACACACACACGCACACATGCGTGTGCACC CGCGCACGCACATACACACACACATATAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAACCTTTGATCAGGAGTGAGATTTTCGGGTTCT GAAACCTGGGACACGAGTCTGTGAATAGTCGGTTTTCTCAGAATAATTTGAATCTGTTTTCTTAGTTTCAAATGACCATTTCCCTGATGC TCTGAGCTTATGATCACACAGAGCCAGTCCATCCTCATTTCCTGGTGGCATCTGTTCATTTACCTTTGTGGACTGTAGCTGATGGCACAG TGCGGGTTCCCTACCAGCCAGGGGTTTCCAAGGGACCTTTGGAGGCCATGCTTAGACACATTCCTGTACCTGAGAACAACCACATAGGCA GGACCAGATCCACATCGTGCAGTCGTGTCATAAAAAAACAAAACAAAACAAAAAAACACTAGGAGTCCACTCAACCCTGGAGGTCTTTGC TAATTGGAATTATGTATTGTCTGTTGGGCTGGGAAATGTCTCTTTCATATTGTAAGTCCAGGATGAACTAGGAGAAAGCAATTTGTTGCC CTGATGATAACTGATGATTTTCACCCTCTCTAGCTGAGGTAACTCAGACAGTGCATGAGGTCAGTTTCTTCTTGAGAAGCAGTGCCTTGG TCTTGTTTCTGTGGTTGGTTCTAGCCCCTGCAGAGCCTGGGAGCTGCAGGAACTGTCTGAGAAAATCTCCCTAATAGGGGAGTGGGTTCC CAGAAGGGAGATCTGGGAGGGGTCAGGAGCCACTAAGTTGCTTCACTCCTTTTTTCTCTAATTTTCTACCTTCCTCTCTGTTCCTGCAGA CAGTTTTGCCAGCTTTGCTTCTGGTTACTAGGGTCTCATGCGTGTCCTGCTTGGAGAGCCATAAGGAAATTGCTGTCTTGTGCTTTGTGT CTCTCATCCAGTCTCTGGCTCTTGGGATTCTGGTCTTTGAGAAATAGTCCCTGAGTATTAGGATACTTTTATCAAAATCTAGTACCAGCT ACGGCCAGAAAGGGCCAGGTGGGACCTGAAAGCAAAGACAATGTTCTTTACCACACGTTTCACATCTGCAACATCCTTCAATTGCGGGAA AAGGAACTTGATTTAACAGAAGAACATGGTAGAGCAGCATCCAGAAAGTCTGTTATTCCTCTTGGATTTTTTGAAATAATCTTCAGAGGA AGGAAGGAAAATCCTATTTTGGGGTATCAGTGTTTGACTAGGGATCATGAAATAATAAACTGAAAAAAACTTTAGAGTTCAGTTGATCCA ACACTTTCCTTTAAAAGTTGAGGGAGCAGAGGCCCATGGGATTAAATGGCTGGTCCAGGTCAGCCAGCAGGTGTAGGGCCTGACAAGAAC ATATTGTTTCCCTGACCCCTAGGCCGTCACACCACACCCTCCATTTCCTCATGTTGCTGACCAGGTGCCCATATGATTTCTACACTTCCC AAGCCTTACCCTGGCATCTTTCTTTTAAATTATATCTGTCCCAGGTGCTCTCCACACATAGGATGGTAATGCCAGTCCCAGGGGAGGGTG TGATAGTAAGGAAGGCCACTGTTAGGTTTCCTTTAGAAATAAAGAGATCTCAGCAGCTTGGAAGAAATCCCAGAAGCGGACTCCATCAAT CCAAGAAAGAGTTGCTTTGTGGAAGGTGAAGGAAGACCCACAGAGTGCTCAGGATGATGCTATTGCTGGAGAGCGAAAGATGGAACAGCC TTGTCCAGGCAGAACAGTCATAAGCCAGGAAATGAAACAAAGGAAAACAGGTGCCTGAATTTCCTGGGGAAACATGGCTTGTTTAAGGAC TTGGAGTTATGGATGGAATTTATGGGACCCACGTGAGCAGACCTGAGGAAGGCTCGATTTCTTTTGTTTCTTGGTCCACTCTGTCACTCT GCTCTGGTCAAGCCCCATTTGGTCTACAGCCCATGAGAAGGAATGAGGCTGGTTCTGCACTCTCAGCATGCAGTCCGAAAGCATGTGGGA GTGGGGAGGGAAAGTGAGATGAATTAAGACAAAGAACAGGTGCCATAGAAGTAGATTTCTAGGAATGAAGTGGGGCAGATCTTATCTTTG TGGATTACAGGCACTGTACTAAAAACAGGTTTCCTATTTAATATAAAAAGAAAGTGAATCTTCTTTTGGATAGAATCATCCATTCCCATC GCCGCACCCCCTACCCCCCAAACACACACACACACACACACACACACACACACACACACACACACACACACGCCCTACTCTTCATTTGCT AGGGGAAGGTCACAGCACAACTAAATCCAGGACAGGACATTGTGACCATGACCCAGCCACAGTCAATACCAGAAAGATGATTCAGAGTCT GAAGTGGTGCCCCAGGTGCCAACAGGATAACCTCTACCCCCCGACTTTGTCTCTGGGGTCCTGTTCCTTCCTGCAAAGCCCAATCCAAGA CTGGCATGGCTCAGAGGTTGTGAGAAAGGCATGGACTGGAACAATCATGTCCAGAGGGGTCTGGAGCTTTGTTTCCTGTTCACCAGCAAA AAATGTCTCTCCCATTTTTCTGAAAGTGGCTGATGTAAGAACAGGCAGAAGGAAAACCCTTTTTGTCAATAACTCTGTCCTTAAGGAATG GTCCTCTGGGAGGGCTGTGCTGCTAGTGGGTACCTCAGTCACACACCCCCAACCCCAGGCAGCCTCTAGAGCCTTCTTGCTTTCATTTTC CTTGAATGTACATAGGAACAAGGGGGAAAGTCTCTTACTGAAGTGCCTGAAACCCAAAGCTAGAGCTTCTAGAGACGCCGTTCTTCCTGT CTCAGCTTGGCCAGCCTTTCAACAATGTTCTCTAGTTTCAAGCTCCAGCTTCTCAGAAAGAATTAAAGAACTTGCTGTTCAAATTAAGTA GAAAGTGAGACTCAATAATAACTGAACTACAGCAAAAGGCAGAGAATTACAGGGAGAAAAAACTTGTACTTACCAGCCCAATTCTACTCT CCTCAAACTGACACACACACACACACACACACACACACACACACACACACACTCTTTTAGGGGACTAAGAGAGAGAAGCATGTTATTACA TTTTACTCATCCAAACAGTAATGCAAAAATAAAACGGTAGAATATGAAAAGCTCAGGATCTCTCCCAAGGCTACCTACTGCAGGAGGGCC AACAGGTGAGATGGGAAGAATGGAAACAGGGACCGATTTTGTAGCTCATACAATTAGGACACCTTAGGAATAGCATTGTAGTAATGGTGA TGAATATGCTCTGCCAAATTCATCCAGTCTGCACCATCTTATAGCTGCCCAGCACACTCGACTGTTCATGTGGTCTCTTTGTAGTGTGAG TTTGGAGTGTCCTATTAGCCTGTTCTGGTTAGGAATGAGTTAACGGCTCTTTCCCTCAACCTTAGTCTAGTCCCAGGGCTGAGGATTCAG CTGGATCCACATGGTCTTGAGGGTTGGCATGAGGAGGGGGAAGCTTTTTTGAATCGCTTTTTGATCACATAATCTGCCATTTTAAGAGTA AGATTTGCTTTATGGAAATCAATTCATTAATAAAAAATGATATTCAAGTTGCAATACCATTTCACAGTGAAATATTTTGAGTACAATTTT >43970_43970_2_LAMC2-NMNAT2_LAMC2_chr1_183155566_ENST00000264144_NMNAT2_chr1_183262928_ENST00000294868_length(amino acids)=305AA_BP=26 MPALWLGCCLCFSLLLPAARATSRREERARDYLHKTGRFIVIGGIVSPVHDSYGKQGLVSSRHRLIMCQLAVQNSDWIRVDPWECYQDTW QTTCSVLEHHRDLMKRVTGCILSNVNTPSMTPVIGQPQNETPQPIYQNSNVATKPTAAKILGKVGESLSRICCVRPPVERFTFVDENANL GTVMRYEEIELRILLLCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRIMNHSSILRKYKNNIMVVKDDINHPMSVVSSTK -------------------------------------------------------------- >43970_43970_3_LAMC2-NMNAT2_LAMC2_chr1_183155566_ENST00000493293_NMNAT2_chr1_183262928_ENST00000287713_length(transcript)=5437nt_BP=194nt ACCACCTGATCAAGGAAAAGGAAGGCACAGCGGAGCGCAGAGTGAGAACCACCAACCGAGGCGCCGGGCAGCGACCCCTGCAGCGGAGAC AGAGACTGAGCGGCCCGGCCCCGCCATGCCTGCGCTCTGGCTGGGCTGCTGCCTCTGCTTCTCGCTCCTCCTGCCCGCAGCCCGGGCCAC CTCCAGGAGGGAAGAAAGAGCCAGGGATTATCTGCACAAAACTGGAAGGTTTATTGTGATTGGCGGGATTGTCTCCCCTGTCCACGACTC CTATGGAAAACAGGGCCTCGTGTCAAGCCGGCACCGTCTCATCATGTGTCAGCTGGCCGTCCAGAATTCTGATTGGATCAGGGTGGACCC TTGGGAGTGCTACCAGGACACCTGGCAGACGACCTGCAGCGTGTTGGAACACCACCGGGACCTCATGAAGAGGGTGACTGGCTGCATCCT CTCCAATGTCAACACACCTTCCATGACACCTGTGATCGGACAGCCACAAAACGAGACCCCCCAGCCCATTTACCAGAACAGCAACGTGGC CACCAAGCCCACTGCAGCCAAGATCTTGGGGAAGGTGGGAGAAAGCCTCAGCCGGATCTGCTGTGTCCGCCCGCCGGTGGAGCGTTTCAC CTTTGTAGATGAGAATGCCAATCTGGGCACGGTGATGCGGTATGAAGAGATTGAGCTACGGATCCTGCTGCTGTGTGGTAGTGACCTGCT GGAGTCCTTCTGCATCCCAGGGCTCTGGAACGAGGCAGATATGGAGGTGATTGTTGGTGACTTTGGGATTGTGGTGGTGCCCCGGGATGC AGCCGACACAGACCGAATCATGAATCACTCCTCAATACTCCGCAAATACAAAAACAACATCATGGTGGTGAAGGATGACATCAACCATCC CATGTCTGTTGTCAGCTCAACCAAGAGCAGGCTGGCCCTGCAGCATGGGGACGGCCATGTTGTGGATTACCTGTCCCAGCCGGTCATCGA CTACATCCTCAAAAGCCAGCTGTACATCAATGCCTCCGGCTAGCAGCCCCTCGTCCTCCGGCAACACAATGGCCCCTCCATCTTTGTCAG CCCCCTGTTTCTCTCCTGCCTCTCTGTTTCTCCATCTCCTCGTCTTGACTGTTTTCCCTACTTGCTGACTTAACCCCCCATAGTGTGGGG GACCTGCAGAGAACCATGGCATTCCCTATTCCACAGTCATCTTTGGACAGACTTTCCTCTAGTCTCCGGGTTGGGGGTGGGTGAGGGAAT GGGGTGGGAGTCGGGGGAAGTGCAGTCCTTGGAGATGTACTGGTGTCCGTCTCCCAGCATGCTCTAGAGAGGCGGCTCTGGTGCCCATCC TCCCAGCACGCTCTGGGGAGGCGGCTCTGGTGCCCATCCTCCCAGCATGCTCTAGAGAGGCGGCTCTGGTGCCCCTCCTCCCAGCATGCT CTGGGGAGGCGGCTCTGGCTCTTGCCTTCCCAGCATGCCCTTTACTACAAAGGGCTATTTTTCTTTTCTTTCTTTTGTTTATTTATTTTT CTTTGTTCACTCCCTGTAGAACTTGGATGAAATCAGTGTCCATGGTTCTTTATGTTTGTAGTCTTGATGTGCTCCTGTGGTATTACTTCC CCTCTGATAGGACATTGTAGCCAGCCTCAGCACTCAGTGAGTTCATCAGGGCCACACCCAGTAGAGAAGGCCAAGCAACCTCCACTTCTT CAGCACCACACACACGCACACACACACACACGCACACATGCGTGTGCACCCGCGCACGCACATACACACACACATATAGCAGTAGCAGCA GCAGCAGCAGCAGCAGCAACCTTTGATCAGGAGTGAGATTTTCGGGTTCTGAAACCTGGGACACGAGTCTGTGAATAGTCGGTTTTCTCA GAATAATTTGAATCTGTTTTCTTAGTTTCAAATGACCATTTCCCTGATGCTCTGAGCTTATGATCACACAGAGCCAGTCCATCCTCATTT CCTGGTGGCATCTGTTCATTTACCTTTGTGGACTGTAGCTGATGGCACAGTGCGGGTTCCCTACCAGCCAGGGGTTTCCAAGGGACCTTT GGAGGCCATGCTTAGACACATTCCTGTACCTGAGAACAACCACATAGGCAGGACCAGATCCACATCGTGCAGTCGTGTCATAAAAAAACA AAACAAAACAAAAAAACACTAGGAGTCCACTCAACCCTGGAGGTCTTTGCTAATTGGAATTATGTATTGTCTGTTGGGCTGGGAAATGTC TCTTTCATATTGTAAGTCCAGGATGAACTAGGAGAAAGCAATTTGTTGCCCTGATGATAACTGATGATTTTCACCCTCTCTAGCTGAGGT AACTCAGACAGTGCATGAGGTCAGTTTCTTCTTGAGAAGCAGTGCCTTGGTCTTGTTTCTGTGGTTGGTTCTAGCCCCTGCAGAGCCTGG GAGCTGCAGGAACTGTCTGAGAAAATCTCCCTAATAGGGGAGTGGGTTCCCAGAAGGGAGATCTGGGAGGGGTCAGGAGCCACTAAGTTG CTTCACTCCTTTTTTCTCTAATTTTCTACCTTCCTCTCTGTTCCTGCAGACAGTTTTGCCAGCTTTGCTTCTGGTTACTAGGGTCTCATG CGTGTCCTGCTTGGAGAGCCATAAGGAAATTGCTGTCTTGTGCTTTGTGTCTCTCATCCAGTCTCTGGCTCTTGGGATTCTGGTCTTTGA GAAATAGTCCCTGAGTATTAGGATACTTTTATCAAAATCTAGTACCAGCTACGGCCAGAAAGGGCCAGGTGGGACCTGAAAGCAAAGACA ATGTTCTTTACCACACGTTTCACATCTGCAACATCCTTCAATTGCGGGAAAAGGAACTTGATTTAACAGAAGAACATGGTAGAGCAGCAT CCAGAAAGTCTGTTATTCCTCTTGGATTTTTTGAAATAATCTTCAGAGGAAGGAAGGAAAATCCTATTTTGGGGTATCAGTGTTTGACTA GGGATCATGAAATAATAAACTGAAAAAAACTTTAGAGTTCAGTTGATCCAACACTTTCCTTTAAAAGTTGAGGGAGCAGAGGCCCATGGG ATTAAATGGCTGGTCCAGGTCAGCCAGCAGGTGTAGGGCCTGACAAGAACATATTGTTTCCCTGACCCCTAGGCCGTCACACCACACCCT CCATTTCCTCATGTTGCTGACCAGGTGCCCATATGATTTCTACACTTCCCAAGCCTTACCCTGGCATCTTTCTTTTAAATTATATCTGTC CCAGGTGCTCTCCACACATAGGATGGTAATGCCAGTCCCAGGGGAGGGTGTGATAGTAAGGAAGGCCACTGTTAGGTTTCCTTTAGAAAT AAAGAGATCTCAGCAGCTTGGAAGAAATCCCAGAAGCGGACTCCATCAATCCAAGAAAGAGTTGCTTTGTGGAAGGTGAAGGAAGACCCA CAGAGTGCTCAGGATGATGCTATTGCTGGAGAGCGAAAGATGGAACAGCCTTGTCCAGGCAGAACAGTCATAAGCCAGGAAATGAAACAA AGGAAAACAGGTGCCTGAATTTCCTGGGGAAACATGGCTTGTTTAAGGACTTGGAGTTATGGATGGAATTTATGGGACCCACGTGAGCAG ACCTGAGGAAGGCTCGATTTCTTTTGTTTCTTGGTCCACTCTGTCACTCTGCTCTGGTCAAGCCCCATTTGGTCTACAGCCCATGAGAAG GAATGAGGCTGGTTCTGCACTCTCAGCATGCAGTCCGAAAGCATGTGGGAGTGGGGAGGGAAAGTGAGATGAATTAAGACAAAGAACAGG TGCCATAGAAGTAGATTTCTAGGAATGAAGTGGGGCAGATCTTATCTTTGTGGATTACAGGCACTGTACTAAAAACAGGTTTCCTATTTA ATATAAAAAGAAAGTGAATCTTCTTTTGGATAGAATCATCCATTCCCATCGCCGCACCCCCTACCCCCCAAACACACACACACACACACA CACACACACACACACACACACACACACACACGCCCTACTCTTCATTTGCTAGGGGAAGGTCACAGCACAACTAAATCCAGGACAGGACAT TGTGACCATGACCCAGCCACAGTCAATACCAGAAAGATGATTCAGAGTCTGAAGTGGTGCCCCAGGTGCCAACAGGATAACCTCTACCCC CCGACTTTGTCTCTGGGGTCCTGTTCCTTCCTGCAAAGCCCAATCCAAGACTGGCATGGCTCAGAGGTTGTGAGAAAGGCATGGACTGGA ACAATCATGTCCAGAGGGGTCTGGAGCTTTGTTTCCTGTTCACCAGCAAAAAATGTCTCTCCCATTTTTCTGAAAGTGGCTGATGTAAGA ACAGGCAGAAGGAAAACCCTTTTTGTCAATAACTCTGTCCTTAAGGAATGGTCCTCTGGGAGGGCTGTGCTGCTAGTGGGTACCTCAGTC ACACACCCCCAACCCCAGGCAGCCTCTAGAGCCTTCTTGCTTTCATTTTCCTTGAATGTACATAGGAACAAGGGGGAAAGTCTCTTACTG AAGTGCCTGAAACCCAAAGCTAGAGCTTCTAGAGACGCCGTTCTTCCTGTCTCAGCTTGGCCAGCCTTTCAACAATGTTCTCTAGTTTCA AGCTCCAGCTTCTCAGAAAGAATTAAAGAACTTGCTGTTCAAATTAAGTAGAAAGTGAGACTCAATAATAACTGAACTACAGCAAAAGGC AGAGAATTACAGGGAGAAAAAACTTGTACTTACCAGCCCAATTCTACTCTCCTCAAACTGACACACACACACACACACACACACACACAC ACACACACACACTCTTTTAGGGGACTAAGAGAGAGAAGCATGTTATTACATTTTACTCATCCAAACAGTAATGCAAAAATAAAACGGTAG AATATGAAAAGCTCAGGATCTCTCCCAAGGCTACCTACTGCAGGAGGGCCAACAGGTGAGATGGGAAGAATGGAAACAGGGACCGATTTT GTAGCTCATACAATTAGGACACCTTAGGAATAGCATTGTAGTAATGGTGATGAATATGCTCTGCCAAATTCATCCAGTCTGCACCATCTT ATAGCTGCCCAGCACACTCGACTGTTCATGTGGTCTCTTTGTAGTGTGAGTTTGGAGTGTCCTATTAGCCTGTTCTGGTTAGGAATGAGT TAACGGCTCTTTCCCTCAACCTTAGTCTAGTCCCAGGGCTGAGGATTCAGCTGGATCCACATGGTCTTGAGGGTTGGCATGAGGAGGGGG AAGCTTTTTTGAATCGCTTTTTGATCACATAATCTGCCATTTTAAGAGTAAGATTTGCTTTATGGAAATCAATTCATTAATAAAAAATGA TATTCAAGTTGCAATACCATTTCACAGTGAAATATTTTGAGTACAATTTTGTTGCTAGAATAGTCATGGGCAAGAGTTTTATGCAAAATG >43970_43970_3_LAMC2-NMNAT2_LAMC2_chr1_183155566_ENST00000493293_NMNAT2_chr1_183262928_ENST00000287713_length(amino acids)=305AA_BP=26 MPALWLGCCLCFSLLLPAARATSRREERARDYLHKTGRFIVIGGIVSPVHDSYGKQGLVSSRHRLIMCQLAVQNSDWIRVDPWECYQDTW QTTCSVLEHHRDLMKRVTGCILSNVNTPSMTPVIGQPQNETPQPIYQNSNVATKPTAAKILGKVGESLSRICCVRPPVERFTFVDENANL GTVMRYEEIELRILLLCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRIMNHSSILRKYKNNIMVVKDDINHPMSVVSSTK -------------------------------------------------------------- >43970_43970_4_LAMC2-NMNAT2_LAMC2_chr1_183155566_ENST00000493293_NMNAT2_chr1_183262928_ENST00000294868_length(transcript)=5437nt_BP=194nt ACCACCTGATCAAGGAAAAGGAAGGCACAGCGGAGCGCAGAGTGAGAACCACCAACCGAGGCGCCGGGCAGCGACCCCTGCAGCGGAGAC AGAGACTGAGCGGCCCGGCCCCGCCATGCCTGCGCTCTGGCTGGGCTGCTGCCTCTGCTTCTCGCTCCTCCTGCCCGCAGCCCGGGCCAC CTCCAGGAGGGAAGAAAGAGCCAGGGATTATCTGCACAAAACTGGAAGGTTTATTGTGATTGGCGGGATTGTCTCCCCTGTCCACGACTC CTATGGAAAACAGGGCCTCGTGTCAAGCCGGCACCGTCTCATCATGTGTCAGCTGGCCGTCCAGAATTCTGATTGGATCAGGGTGGACCC TTGGGAGTGCTACCAGGACACCTGGCAGACGACCTGCAGCGTGTTGGAACACCACCGGGACCTCATGAAGAGGGTGACTGGCTGCATCCT CTCCAATGTCAACACACCTTCCATGACACCTGTGATCGGACAGCCACAAAACGAGACCCCCCAGCCCATTTACCAGAACAGCAACGTGGC CACCAAGCCCACTGCAGCCAAGATCTTGGGGAAGGTGGGAGAAAGCCTCAGCCGGATCTGCTGTGTCCGCCCGCCGGTGGAGCGTTTCAC CTTTGTAGATGAGAATGCCAATCTGGGCACGGTGATGCGGTATGAAGAGATTGAGCTACGGATCCTGCTGCTGTGTGGTAGTGACCTGCT GGAGTCCTTCTGCATCCCAGGGCTCTGGAACGAGGCAGATATGGAGGTGATTGTTGGTGACTTTGGGATTGTGGTGGTGCCCCGGGATGC AGCCGACACAGACCGAATCATGAATCACTCCTCAATACTCCGCAAATACAAAAACAACATCATGGTGGTGAAGGATGACATCAACCATCC CATGTCTGTTGTCAGCTCAACCAAGAGCAGGCTGGCCCTGCAGCATGGGGACGGCCATGTTGTGGATTACCTGTCCCAGCCGGTCATCGA CTACATCCTCAAAAGCCAGCTGTACATCAATGCCTCCGGCTAGCAGCCCCTCGTCCTCCGGCAACACAATGGCCCCTCCATCTTTGTCAG CCCCCTGTTTCTCTCCTGCCTCTCTGTTTCTCCATCTCCTCGTCTTGACTGTTTTCCCTACTTGCTGACTTAACCCCCCATAGTGTGGGG GACCTGCAGAGAACCATGGCATTCCCTATTCCACAGTCATCTTTGGACAGACTTTCCTCTAGTCTCCGGGTTGGGGGTGGGTGAGGGAAT GGGGTGGGAGTCGGGGGAAGTGCAGTCCTTGGAGATGTACTGGTGTCCGTCTCCCAGCATGCTCTAGAGAGGCGGCTCTGGTGCCCATCC TCCCAGCACGCTCTGGGGAGGCGGCTCTGGTGCCCATCCTCCCAGCATGCTCTAGAGAGGCGGCTCTGGTGCCCCTCCTCCCAGCATGCT CTGGGGAGGCGGCTCTGGCTCTTGCCTTCCCAGCATGCCCTTTACTACAAAGGGCTATTTTTCTTTTCTTTCTTTTGTTTATTTATTTTT CTTTGTTCACTCCCTGTAGAACTTGGATGAAATCAGTGTCCATGGTTCTTTATGTTTGTAGTCTTGATGTGCTCCTGTGGTATTACTTCC CCTCTGATAGGACATTGTAGCCAGCCTCAGCACTCAGTGAGTTCATCAGGGCCACACCCAGTAGAGAAGGCCAAGCAACCTCCACTTCTT CAGCACCACACACACGCACACACACACACACGCACACATGCGTGTGCACCCGCGCACGCACATACACACACACATATAGCAGTAGCAGCA GCAGCAGCAGCAGCAGCAACCTTTGATCAGGAGTGAGATTTTCGGGTTCTGAAACCTGGGACACGAGTCTGTGAATAGTCGGTTTTCTCA GAATAATTTGAATCTGTTTTCTTAGTTTCAAATGACCATTTCCCTGATGCTCTGAGCTTATGATCACACAGAGCCAGTCCATCCTCATTT CCTGGTGGCATCTGTTCATTTACCTTTGTGGACTGTAGCTGATGGCACAGTGCGGGTTCCCTACCAGCCAGGGGTTTCCAAGGGACCTTT GGAGGCCATGCTTAGACACATTCCTGTACCTGAGAACAACCACATAGGCAGGACCAGATCCACATCGTGCAGTCGTGTCATAAAAAAACA AAACAAAACAAAAAAACACTAGGAGTCCACTCAACCCTGGAGGTCTTTGCTAATTGGAATTATGTATTGTCTGTTGGGCTGGGAAATGTC TCTTTCATATTGTAAGTCCAGGATGAACTAGGAGAAAGCAATTTGTTGCCCTGATGATAACTGATGATTTTCACCCTCTCTAGCTGAGGT AACTCAGACAGTGCATGAGGTCAGTTTCTTCTTGAGAAGCAGTGCCTTGGTCTTGTTTCTGTGGTTGGTTCTAGCCCCTGCAGAGCCTGG GAGCTGCAGGAACTGTCTGAGAAAATCTCCCTAATAGGGGAGTGGGTTCCCAGAAGGGAGATCTGGGAGGGGTCAGGAGCCACTAAGTTG CTTCACTCCTTTTTTCTCTAATTTTCTACCTTCCTCTCTGTTCCTGCAGACAGTTTTGCCAGCTTTGCTTCTGGTTACTAGGGTCTCATG CGTGTCCTGCTTGGAGAGCCATAAGGAAATTGCTGTCTTGTGCTTTGTGTCTCTCATCCAGTCTCTGGCTCTTGGGATTCTGGTCTTTGA GAAATAGTCCCTGAGTATTAGGATACTTTTATCAAAATCTAGTACCAGCTACGGCCAGAAAGGGCCAGGTGGGACCTGAAAGCAAAGACA ATGTTCTTTACCACACGTTTCACATCTGCAACATCCTTCAATTGCGGGAAAAGGAACTTGATTTAACAGAAGAACATGGTAGAGCAGCAT CCAGAAAGTCTGTTATTCCTCTTGGATTTTTTGAAATAATCTTCAGAGGAAGGAAGGAAAATCCTATTTTGGGGTATCAGTGTTTGACTA GGGATCATGAAATAATAAACTGAAAAAAACTTTAGAGTTCAGTTGATCCAACACTTTCCTTTAAAAGTTGAGGGAGCAGAGGCCCATGGG ATTAAATGGCTGGTCCAGGTCAGCCAGCAGGTGTAGGGCCTGACAAGAACATATTGTTTCCCTGACCCCTAGGCCGTCACACCACACCCT CCATTTCCTCATGTTGCTGACCAGGTGCCCATATGATTTCTACACTTCCCAAGCCTTACCCTGGCATCTTTCTTTTAAATTATATCTGTC CCAGGTGCTCTCCACACATAGGATGGTAATGCCAGTCCCAGGGGAGGGTGTGATAGTAAGGAAGGCCACTGTTAGGTTTCCTTTAGAAAT AAAGAGATCTCAGCAGCTTGGAAGAAATCCCAGAAGCGGACTCCATCAATCCAAGAAAGAGTTGCTTTGTGGAAGGTGAAGGAAGACCCA CAGAGTGCTCAGGATGATGCTATTGCTGGAGAGCGAAAGATGGAACAGCCTTGTCCAGGCAGAACAGTCATAAGCCAGGAAATGAAACAA AGGAAAACAGGTGCCTGAATTTCCTGGGGAAACATGGCTTGTTTAAGGACTTGGAGTTATGGATGGAATTTATGGGACCCACGTGAGCAG ACCTGAGGAAGGCTCGATTTCTTTTGTTTCTTGGTCCACTCTGTCACTCTGCTCTGGTCAAGCCCCATTTGGTCTACAGCCCATGAGAAG GAATGAGGCTGGTTCTGCACTCTCAGCATGCAGTCCGAAAGCATGTGGGAGTGGGGAGGGAAAGTGAGATGAATTAAGACAAAGAACAGG TGCCATAGAAGTAGATTTCTAGGAATGAAGTGGGGCAGATCTTATCTTTGTGGATTACAGGCACTGTACTAAAAACAGGTTTCCTATTTA ATATAAAAAGAAAGTGAATCTTCTTTTGGATAGAATCATCCATTCCCATCGCCGCACCCCCTACCCCCCAAACACACACACACACACACA CACACACACACACACACACACACACACACACGCCCTACTCTTCATTTGCTAGGGGAAGGTCACAGCACAACTAAATCCAGGACAGGACAT TGTGACCATGACCCAGCCACAGTCAATACCAGAAAGATGATTCAGAGTCTGAAGTGGTGCCCCAGGTGCCAACAGGATAACCTCTACCCC CCGACTTTGTCTCTGGGGTCCTGTTCCTTCCTGCAAAGCCCAATCCAAGACTGGCATGGCTCAGAGGTTGTGAGAAAGGCATGGACTGGA ACAATCATGTCCAGAGGGGTCTGGAGCTTTGTTTCCTGTTCACCAGCAAAAAATGTCTCTCCCATTTTTCTGAAAGTGGCTGATGTAAGA ACAGGCAGAAGGAAAACCCTTTTTGTCAATAACTCTGTCCTTAAGGAATGGTCCTCTGGGAGGGCTGTGCTGCTAGTGGGTACCTCAGTC ACACACCCCCAACCCCAGGCAGCCTCTAGAGCCTTCTTGCTTTCATTTTCCTTGAATGTACATAGGAACAAGGGGGAAAGTCTCTTACTG AAGTGCCTGAAACCCAAAGCTAGAGCTTCTAGAGACGCCGTTCTTCCTGTCTCAGCTTGGCCAGCCTTTCAACAATGTTCTCTAGTTTCA AGCTCCAGCTTCTCAGAAAGAATTAAAGAACTTGCTGTTCAAATTAAGTAGAAAGTGAGACTCAATAATAACTGAACTACAGCAAAAGGC AGAGAATTACAGGGAGAAAAAACTTGTACTTACCAGCCCAATTCTACTCTCCTCAAACTGACACACACACACACACACACACACACACAC ACACACACACACTCTTTTAGGGGACTAAGAGAGAGAAGCATGTTATTACATTTTACTCATCCAAACAGTAATGCAAAAATAAAACGGTAG AATATGAAAAGCTCAGGATCTCTCCCAAGGCTACCTACTGCAGGAGGGCCAACAGGTGAGATGGGAAGAATGGAAACAGGGACCGATTTT GTAGCTCATACAATTAGGACACCTTAGGAATAGCATTGTAGTAATGGTGATGAATATGCTCTGCCAAATTCATCCAGTCTGCACCATCTT ATAGCTGCCCAGCACACTCGACTGTTCATGTGGTCTCTTTGTAGTGTGAGTTTGGAGTGTCCTATTAGCCTGTTCTGGTTAGGAATGAGT TAACGGCTCTTTCCCTCAACCTTAGTCTAGTCCCAGGGCTGAGGATTCAGCTGGATCCACATGGTCTTGAGGGTTGGCATGAGGAGGGGG AAGCTTTTTTGAATCGCTTTTTGATCACATAATCTGCCATTTTAAGAGTAAGATTTGCTTTATGGAAATCAATTCATTAATAAAAAATGA TATTCAAGTTGCAATACCATTTCACAGTGAAATATTTTGAGTACAATTTTGTTGCTAGAATAGTCATGGGCAAGAGTTTTATGCAAAATG >43970_43970_4_LAMC2-NMNAT2_LAMC2_chr1_183155566_ENST00000493293_NMNAT2_chr1_183262928_ENST00000294868_length(amino acids)=305AA_BP=26 MPALWLGCCLCFSLLLPAARATSRREERARDYLHKTGRFIVIGGIVSPVHDSYGKQGLVSSRHRLIMCQLAVQNSDWIRVDPWECYQDTW QTTCSVLEHHRDLMKRVTGCILSNVNTPSMTPVIGQPQNETPQPIYQNSNVATKPTAAKILGKVGESLSRICCVRPPVERFTFVDENANL GTVMRYEEIELRILLLCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRIMNHSSILRKYKNNIMVVKDDINHPMSVVSSTK -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for LAMC2-NMNAT2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for LAMC2-NMNAT2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for LAMC2-NMNAT2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |