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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:LIMCH1-HOPX (FusionGDB2 ID:44698)

Fusion Gene Summary for LIMCH1-HOPX

check button Fusion gene summary
Fusion gene informationFusion gene name: LIMCH1-HOPX
Fusion gene ID: 44698
HgeneTgene
Gene symbol

LIMCH1

HOPX

Gene ID

22998

84525

Gene nameLIM and calponin homology domains 1HOP homeobox
SynonymsLIMCH1A|LMO7BCAMEO|HOD|HOP|LAGY|NECC1|OB1|SMAP31|TOTO
Cytomap

4p13

4q12

Type of geneprotein-codingprotein-coding
DescriptionLIM and calponin homology domains-containing protein 1homeodomain-only proteinlung cancer-associated Y proteinnot expressed in choriocarcinoma clone 1odd homeobox protein 1
Modification date2020031320200313
UniProtAcc

Q9UPQ0

Q9BPY8

Ensembl transtripts involved in fusion geneENST00000313860, ENST00000508501, 
ENST00000512632, ENST00000512820, 
ENST00000512946, ENST00000509638, 
ENST00000513024, ENST00000381753, 
ENST00000396595, ENST00000503057, 
ENST00000509277, ENST00000509454, 
ENST00000511496, ENST00000514096, 
ENST00000515785, 		ENST00000317745, 
ENST00000337881, ENST00000381255, 
ENST00000381260, ENST00000503639, 
ENST00000553379, ENST00000555760, 
ENST00000556376, ENST00000556614, 
ENST00000508121, ENST00000605395, 
ENST00000420433, ENST00000554144, 
Fusion gene scores* DoF score14 X 12 X 9=15126 X 5 X 3=90
# samples 197
** MAII scorelog2(19/1512*10)=-2.99238681589013
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(7/90*10)=-0.362570079384708
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: LIMCH1 [Title/Abstract] AND HOPX [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointLIMCH1(41362953)-HOPX(57522178), # samples:2
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneHOPX

GO:0001829

trophectodermal cell differentiation

17576768

TgeneHOPX

GO:0045596

negative regulation of cell differentiation

17576768

TgeneHOPX

GO:0051131

chaperone-mediated protein complex assembly

10811660


check buttonFusion gene breakpoints across LIMCH1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across HOPX (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4PRADTCGA-J4-A67T-01ALIMCH1chr4

41362953

+HOPXchr4

57522178

-
ChimerDB4PRADTCGA-J4-A67TLIMCH1chr4

41361820

+HOPXchr4

57522178

-
ChimerDB4PRADTCGA-J4-A67TLIMCH1chr4

41362953

+HOPXchr4

57522178

-


Top

Fusion Gene ORF analysis for LIMCH1-HOPX

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-5UTRENST00000313860ENST00000317745LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000313860ENST00000337881LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000313860ENST00000381255LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000313860ENST00000381260LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000313860ENST00000503639LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000313860ENST00000553379LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000313860ENST00000555760LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000313860ENST00000556376LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000313860ENST00000556614LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000508501ENST00000317745LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000508501ENST00000337881LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000508501ENST00000381255LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000508501ENST00000381260LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000508501ENST00000503639LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000508501ENST00000553379LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000508501ENST00000555760LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000508501ENST00000556376LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000508501ENST00000556614LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512632ENST00000317745LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512632ENST00000337881LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512632ENST00000381255LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512632ENST00000381260LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512632ENST00000503639LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512632ENST00000553379LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512632ENST00000555760LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512632ENST00000556376LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512632ENST00000556614LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512820ENST00000317745LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512820ENST00000337881LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512820ENST00000381255LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512820ENST00000381260LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512820ENST00000503639LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512820ENST00000553379LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512820ENST00000555760LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512820ENST00000556376LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512820ENST00000556614LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512946ENST00000317745LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512946ENST00000337881LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512946ENST00000381255LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512946ENST00000381260LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512946ENST00000503639LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512946ENST00000553379LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512946ENST00000555760LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512946ENST00000556376LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-5UTRENST00000512946ENST00000556614LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-intronENST00000313860ENST00000508121LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-intronENST00000313860ENST00000605395LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-intronENST00000508501ENST00000508121LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-intronENST00000508501ENST00000605395LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-intronENST00000512632ENST00000508121LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-intronENST00000512632ENST00000605395LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-intronENST00000512820ENST00000508121LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-intronENST00000512820ENST00000605395LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-intronENST00000512946ENST00000508121LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5CDS-intronENST00000512946ENST00000605395LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5UTR-3CDSENST00000509638ENST00000420433LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5UTR-3CDSENST00000509638ENST00000554144LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5UTR-3CDSENST00000513024ENST00000420433LIMCH1chr4

41361820

+HOPXchr4

57522178

-
5UTR-3CDSENST00000513024ENST00000554144LIMCH1chr4

41361820

+HOPXchr4

57522178

-
5UTR-5UTRENST00000509638ENST00000317745LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5UTR-5UTRENST00000509638ENST00000337881LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5UTR-5UTRENST00000509638ENST00000381255LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5UTR-5UTRENST00000509638ENST00000381260LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5UTR-5UTRENST00000509638ENST00000503639LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5UTR-5UTRENST00000509638ENST00000553379LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5UTR-5UTRENST00000509638ENST00000555760LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5UTR-5UTRENST00000509638ENST00000556376LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5UTR-5UTRENST00000509638ENST00000556614LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5UTR-5UTRENST00000513024ENST00000317745LIMCH1chr4

41361820

+HOPXchr4

57522178

-
5UTR-5UTRENST00000513024ENST00000337881LIMCH1chr4

41361820

+HOPXchr4

57522178

-
5UTR-5UTRENST00000513024ENST00000381255LIMCH1chr4

41361820

+HOPXchr4

57522178

-
5UTR-5UTRENST00000513024ENST00000381260LIMCH1chr4

41361820

+HOPXchr4

57522178

-
5UTR-5UTRENST00000513024ENST00000503639LIMCH1chr4

41361820

+HOPXchr4

57522178

-
5UTR-5UTRENST00000513024ENST00000553379LIMCH1chr4

41361820

+HOPXchr4

57522178

-
5UTR-5UTRENST00000513024ENST00000555760LIMCH1chr4

41361820

+HOPXchr4

57522178

-
5UTR-5UTRENST00000513024ENST00000556376LIMCH1chr4

41361820

+HOPXchr4

57522178

-
5UTR-5UTRENST00000513024ENST00000556614LIMCH1chr4

41361820

+HOPXchr4

57522178

-
5UTR-intronENST00000509638ENST00000508121LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5UTR-intronENST00000509638ENST00000605395LIMCH1chr4

41362953

+HOPXchr4

57522178

-
5UTR-intronENST00000513024ENST00000508121LIMCH1chr4

41361820

+HOPXchr4

57522178

-
5UTR-intronENST00000513024ENST00000605395LIMCH1chr4

41361820

+HOPXchr4

57522178

-
In-frameENST00000313860ENST00000420433LIMCH1chr4

41362953

+HOPXchr4

57522178

-
In-frameENST00000313860ENST00000554144LIMCH1chr4

41362953

+HOPXchr4

57522178

-
In-frameENST00000508501ENST00000420433LIMCH1chr4

41362953

+HOPXchr4

57522178

-
In-frameENST00000508501ENST00000554144LIMCH1chr4

41362953

+HOPXchr4

57522178

-
In-frameENST00000512632ENST00000420433LIMCH1chr4

41362953

+HOPXchr4

57522178

-
In-frameENST00000512632ENST00000554144LIMCH1chr4

41362953

+HOPXchr4

57522178

-
In-frameENST00000512820ENST00000420433LIMCH1chr4

41362953

+HOPXchr4

57522178

-
In-frameENST00000512820ENST00000554144LIMCH1chr4

41362953

+HOPXchr4

57522178

-
In-frameENST00000512946ENST00000420433LIMCH1chr4

41362953

+HOPXchr4

57522178

-
In-frameENST00000512946ENST00000554144LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000313860ENST00000420433LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000313860ENST00000554144LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000381753ENST00000420433LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000381753ENST00000420433LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000381753ENST00000554144LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000381753ENST00000554144LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000396595ENST00000420433LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000396595ENST00000420433LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000396595ENST00000554144LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000396595ENST00000554144LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000503057ENST00000420433LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000503057ENST00000420433LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000503057ENST00000554144LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000503057ENST00000554144LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000508501ENST00000420433LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000508501ENST00000554144LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000509277ENST00000420433LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000509277ENST00000420433LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000509277ENST00000554144LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000509277ENST00000554144LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000509454ENST00000420433LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000509454ENST00000420433LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000509454ENST00000554144LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000509454ENST00000554144LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000509638ENST00000420433LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000509638ENST00000554144LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000511496ENST00000420433LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000511496ENST00000420433LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000511496ENST00000554144LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000511496ENST00000554144LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000512632ENST00000420433LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000512632ENST00000554144LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000512820ENST00000420433LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000512820ENST00000554144LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000512946ENST00000420433LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000512946ENST00000554144LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000513024ENST00000420433LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000513024ENST00000554144LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000514096ENST00000420433LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000514096ENST00000420433LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000514096ENST00000554144LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000514096ENST00000554144LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000515785ENST00000420433LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000515785ENST00000420433LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-3CDSENST00000515785ENST00000554144LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-3CDSENST00000515785ENST00000554144LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000313860ENST00000317745LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000313860ENST00000337881LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000313860ENST00000381255LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000313860ENST00000381260LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000313860ENST00000503639LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000313860ENST00000553379LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000313860ENST00000555760LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000313860ENST00000556376LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000313860ENST00000556614LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000381753ENST00000317745LIMCH1chr4

41362953

+HOPXchr4

57522178

-
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57522178

-
intron-5UTRENST00000515785ENST00000317745LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000337881LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000337881LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000381255LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000381255LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000381260LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000381260LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000503639LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000503639LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000553379LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000553379LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000555760LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000555760LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000556376LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000556376LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000556614LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-5UTRENST00000515785ENST00000556614LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000313860ENST00000508121LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000313860ENST00000605395LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000381753ENST00000508121LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000381753ENST00000508121LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000381753ENST00000605395LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000381753ENST00000605395LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000396595ENST00000508121LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000396595ENST00000508121LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000396595ENST00000605395LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000396595ENST00000605395LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000503057ENST00000508121LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000503057ENST00000508121LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000503057ENST00000605395LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000503057ENST00000605395LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000508501ENST00000508121LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000508501ENST00000605395LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000509277ENST00000508121LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000509277ENST00000508121LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000509277ENST00000605395LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000509277ENST00000605395LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000509454ENST00000508121LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000509454ENST00000508121LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000509454ENST00000605395LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000509454ENST00000605395LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000509638ENST00000508121LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000509638ENST00000605395LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000511496ENST00000508121LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000511496ENST00000508121LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000511496ENST00000605395LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000511496ENST00000605395LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000512632ENST00000508121LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000512632ENST00000605395LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000512820ENST00000508121LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000512820ENST00000605395LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000512946ENST00000508121LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000512946ENST00000605395LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000513024ENST00000508121LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000513024ENST00000605395LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000514096ENST00000508121LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000514096ENST00000508121LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000514096ENST00000605395LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000514096ENST00000605395LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000515785ENST00000508121LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000515785ENST00000508121LIMCH1chr4

41361820

+HOPXchr4

57522178

-
intron-intronENST00000515785ENST00000605395LIMCH1chr4

41362953

+HOPXchr4

57522178

-
intron-intronENST00000515785ENST00000605395LIMCH1chr4

41361820

+HOPXchr4

57522178

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000508501LIMCH1chr441362953+ENST00000554144HOPXchr457522178-124715232448138
ENST00000508501LIMCH1chr441362953+ENST00000420433HOPXchr457522178-111715248419123
ENST00000512946LIMCH1chr441362953+ENST00000554144HOPXchr457522178-124715232448138
ENST00000512946LIMCH1chr441362953+ENST00000420433HOPXchr457522178-111715248419123
ENST00000313860LIMCH1chr441362953+ENST00000554144HOPXchr457522178-124515030446138
ENST00000313860LIMCH1chr441362953+ENST00000420433HOPXchr457522178-111515046417123
ENST00000512632LIMCH1chr441362953+ENST00000554144HOPXchr457522178-122513010426138
ENST00000512632LIMCH1chr441362953+ENST00000420433HOPXchr457522178-109513026397123
ENST00000512820LIMCH1chr441362953+ENST00000554144HOPXchr457522178-12171222418138
ENST00000512820LIMCH1chr441362953+ENST00000420433HOPXchr457522178-108712218389123

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000508501ENST00000554144LIMCH1chr441362953+HOPXchr457522178-0.0081308360.9918691
ENST00000508501ENST00000420433LIMCH1chr441362953+HOPXchr457522178-0.043659490.95634055
ENST00000512946ENST00000554144LIMCH1chr441362953+HOPXchr457522178-0.0081308360.9918691
ENST00000512946ENST00000420433LIMCH1chr441362953+HOPXchr457522178-0.043659490.95634055
ENST00000313860ENST00000554144LIMCH1chr441362953+HOPXchr457522178-0.0081903540.99180967
ENST00000313860ENST00000420433LIMCH1chr441362953+HOPXchr457522178-0.054031540.94596845
ENST00000512632ENST00000554144LIMCH1chr441362953+HOPXchr457522178-0.0140170180.98598295
ENST00000512632ENST00000420433LIMCH1chr441362953+HOPXchr457522178-0.0584041070.94159585
ENST00000512820ENST00000554144LIMCH1chr441362953+HOPXchr457522178-0.0108990640.989101
ENST00000512820ENST00000420433LIMCH1chr441362953+HOPXchr457522178-0.0569420270.94305795

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Fusion Genomic Features for LIMCH1-HOPX


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for LIMCH1-HOPX


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr4:41362953/chr4:57522178)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
LIMCH1

Q9UPQ0

HOPX

Q9BPY8

FUNCTION: Actin stress fibers-associated protein that activates non-muscle myosin IIa. Activates the non-muscle myosin IIa complex by promoting the phosphorylation of its regulatory subunit MRLC/MYL9. Through the activation of non-muscle myosin IIa, positively regulates actin stress fibers assembly and stabilizes focal adhesions. It therefore negatively regulates cell spreading and cell migration. {ECO:0000269|PubMed:28228547}.FUNCTION: Atypical homeodomain protein which does not bind DNA and is required to modulate cardiac growth and development. Acts via its interaction with SRF, thereby modulating the expression of SRF-dependent cardiac-specific genes and cardiac development. Prevents SRF-dependent transcription either by inhibiting SRF binding to DNA or by recruiting histone deacetylase (HDAC) proteins that prevent transcription by SRF. Overexpression causes cardiac hypertrophy (By similarity). May act as a tumor suppressor. Acts as a co-chaperone for HSPA1A and HSPA1B chaperone proteins and assists in chaperone-mediated protein refolding (PubMed:27708256). {ECO:0000250|UniProtKB:Q8R1H0, ECO:0000269|PubMed:27708256}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneHOPXchr4:41362953chr4:57522178ENST00000317745033_62074.0DNA bindingHomeobox%3B atypical
TgeneHOPXchr4:41362953chr4:57522178ENST00000337881033_62074.0DNA bindingHomeobox%3B atypical
TgeneHOPXchr4:41362953chr4:57522178ENST00000381255033_62074.0DNA bindingHomeobox%3B atypical
TgeneHOPXchr4:41362953chr4:57522178ENST00000381260043_62095.0DNA bindingHomeobox%3B atypical
TgeneHOPXchr4:41362953chr4:57522178ENST00000503639023_62074.0DNA bindingHomeobox%3B atypical
TgeneHOPXchr4:41362953chr4:57522178ENST00000553379033_62074.0DNA bindingHomeobox%3B atypical
TgeneHOPXchr4:41362953chr4:57522178ENST00000555760033_62074.0DNA bindingHomeobox%3B atypical
TgeneHOPXchr4:41362953chr4:57522178ENST00000556376143_62074.0DNA bindingHomeobox%3B atypical
TgeneHOPXchr4:41362953chr4:57522178ENST00000556614033_62074.0DNA bindingHomeobox%3B atypical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000313860+127354_439321084.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000313860+127782_823321084.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000381753+120354_4390891.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000381753+120782_8230891.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000396595+121354_4390903.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000396595+121782_8230903.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000508501+126354_439321057.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000508501+126782_823321057.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000511496+123354_4390898.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000511496+123782_8230898.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000512820+126354_439321070.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000512820+126782_823321070.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000512946+126354_439321058.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000512946+126782_823321058.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000513024+126354_4390911.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000513024+126782_8230911.0Coiled coilOntology_term=ECO:0000255
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000313860+1271011_1077321084.0DomainLIM zinc-binding
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000313860+12721_125321084.0DomainCalponin-homology (CH)
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000381753+1201011_10770891.0DomainLIM zinc-binding
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000381753+12021_1250891.0DomainCalponin-homology (CH)
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000396595+1211011_10770903.0DomainLIM zinc-binding
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000396595+12121_1250903.0DomainCalponin-homology (CH)
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000508501+1261011_1077321057.0DomainLIM zinc-binding
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000508501+12621_125321057.0DomainCalponin-homology (CH)
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000511496+1231011_10770898.0DomainLIM zinc-binding
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000511496+12321_1250898.0DomainCalponin-homology (CH)
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000512820+1261011_1077321070.0DomainLIM zinc-binding
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000512820+12621_125321070.0DomainCalponin-homology (CH)
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000512946+1261011_1077321058.0DomainLIM zinc-binding
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000512946+12621_125321058.0DomainCalponin-homology (CH)
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000513024+1261011_10770911.0DomainLIM zinc-binding
HgeneLIMCH1chr4:41362953chr4:57522178ENST00000513024+12621_1250911.0DomainCalponin-homology (CH)
TgeneHOPXchr4:41362953chr4:57522178ENST00000420433143_621492.0DNA bindingHomeobox%3B atypical
TgeneHOPXchr4:41362953chr4:57522178ENST00000508121033_621492.0DNA bindingHomeobox%3B atypical
TgeneHOPXchr4:41362953chr4:57522178ENST00000554144153_6214113.0DNA bindingHomeobox%3B atypical


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Fusion Gene Sequence for LIMCH1-HOPX


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>44698_44698_1_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000313860_HOPX_chr4_57522178_ENST00000420433_length(transcript)=1115nt_BP=150nt
CGACGGCGGCGGCCGTCCTCATCCCGGCGCTTGAGAGGACGCGGGGCTGCGCAAATGGCTTGTCCCGCTCTCGGTCTGGAAGCTCTTCAG
CCCCTGCAGCCCGAGCCGCCCCCCGAGCCCGCCTTCTCCGAGGCGCAGAAGTGGATTGAGCGCGCAGGGACCATGTCGGCGGAGACCGCG
AGCGGCCCCACAGAGGACCAGGTGGAAATCCTGGAGTACAACTTCAACAAGGTCGACAAGCACCCGGATTCCACCACGCTGTGCCTCATC
GCGGCCGAGGCAGGCCTTTCCGAGGAGGAGACCCAGAAATGGTTTAAGCAGCGCCTGGCAAAGTGGCGGCGCTCAGAAGGCCTGCCCTCA
GAGTGCAGATCCGTCACAGACTAAGGAGATGGCAGGCATTGACAGCTTCACTCCATGAAGGCCATCTCTGTTTCTCTCCTCCGCTTAACC
AAGCTGTTGTGGTTTTTCAGCATAGTGTTGTATGTTCCATTGCTAGCTGTCCTGCTGTTTAACACAGTGTTGTATTTTTTTTCTAAATGT
ACATAATTAGAAAAGAAAATAACAATAGGAAGCTATGTGTATCTTCTGTGTAAAGCAGTGGCTTCACTGGAAAAATGGTGTGGCTAGCAT
TTCCCTTTGAGTCATGATGACAGATGGTGTGAAAACCATCTAAGTTTGCTTTTGACCATCACCTCCCAGTAGCAATTTGCTTTCATAATC
CATTTAGCAATCCAGGCCTCTGTTGAAAAGATAATATGAGGGAGAAGGGAACACATTTCCTTCTGAACTTACTTCCCTAAGTCACTTTCC
TTATGTATCATCTAATACAATGATGGTTGAGTGAAAATACAGAAGGGGTGTTTGAGTATTCAGATTTCATAAAACACTTCCTTGGAATAT
AGCTGCATTAACTTGGAAAGAAGCCTGTTGGGCCAGAAGACAGAAACTCCAACTGGCAAAAAAGCAAGCATCTAAGAAAAAAAACCACCA
AAGTTCTTGAATTTACTATATTTAAATGCATTGGTTAAGTTTATTTTGCTAAATAAAGTGAACTGCTTTTTGTCTCTAAAATGATATTCT

>44698_44698_1_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000313860_HOPX_chr4_57522178_ENST00000420433_length(amino acids)=123AA_BP=14
MRKWLVPLSVWKLFSPCSPSRPPSPPSPRRRSGLSAQGPCRRRPRAAPQRTRWKSWSTTSTRSTSTRIPPRCASSRPRQAFPRRRPRNGL

--------------------------------------------------------------
>44698_44698_2_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000313860_HOPX_chr4_57522178_ENST00000554144_length(transcript)=1245nt_BP=150nt
CGACGGCGGCGGCCGTCCTCATCCCGGCGCTTGAGAGGACGCGGGGCTGCGCAAATGGCTTGTCCCGCTCTCGGTCTGGAAGCTCTTCAG
CCCCTGCAGCCCGAGCCGCCCCCCGAGCCCGCCTTCTCCGAGGCGCAGAAGTGGATTGAGCGCGCAGGGACCATGTCGGCGGAGACCGCG
AGCGGCCCCACAGAGGACCAGGTGGAAATCCTGGAGTACAACTTCAACAAGGTCGACAAGCACCCGGATTCCACCACGCTGTGCCTCATC
GCGGCCGAGGCAGGCCTTTCCGAGGAGGAGACCCAGGGTAGTGATTTGATCTCCAGGAGCAAAATATGGCACCCAGAAAGTAGCCCCCAA
AGAGAAGGCTACCCCCATGATAGTCTGCCGTGCTTGGCTTTCGATTACTTTTCTCTACTGCCGCCCCAGTGTAAAGAAATGGTTTAAGCA
GCGCCTGGCAAAGTGGCGGCGCTCAGAAGGCCTGCCCTCAGAGTGCAGATCCGTCACAGACTAAGGAGATGGCAGGCATTGACAGCTTCA
CTCCATGAAGGCCATCTCTGTTTCTCTCCTCCGCTTAACCAAGCTGTTGTGGTTTTTCAGCATAGTGTTGTATGTTCCATTGCTAGCTGT
CCTGCTGTTTAACACAGTGTTGTATTTTTTTTCTAAATGTACATAATTAGAAAAGAAAATAACAATAGGAAGCTATGTGTATCTTCTGTG
TAAAGCAGTGGCTTCACTGGAAAAATGGTGTGGCTAGCATTTCCCTTTGAGTCATGATGACAGATGGTGTGAAAACCATCTAAGTTTGCT
TTTGACCATCACCTCCCAGTAGCAATTTGCTTTCATAATCCATTTAGCAATCCAGGCCTCTGTTGAAAAGATAATATGAGGGAGAAGGGA
ACACATTTCCTTCTGAACTTACTTCCCTAAGTCACTTTCCTTATGTATCATCTAATACAATGATGGTTGAGTGAAAATACAGAAGGGGTG
TTTGAGTATTCAGATTTCATAAAACACTTCCTTGGAATATAGCTGCATTAACTTGGAAAGAAGCCTGTTGGGCCAGAAGACAGAAACTCC
AACTGGCAAAAAAGCAAGCATCTAAGAAAAAAAACCACCAAAGTTCTTGAATTTACTATATTTAAATGCATTGGTTAAGTTTATTTTGCT

>44698_44698_2_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000313860_HOPX_chr4_57522178_ENST00000554144_length(amino acids)=138AA_BP=40
MRGRGAAQMACPALGLEALQPLQPEPPPEPAFSEAQKWIERAGTMSAETASGPTEDQVEILEYNFNKVDKHPDSTTLCLIAAEAGLSEEE

--------------------------------------------------------------
>44698_44698_3_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000508501_HOPX_chr4_57522178_ENST00000420433_length(transcript)=1117nt_BP=152nt
GGCGACGGCGGCGGCCGTCCTCATCCCGGCGCTTGAGAGGACGCGGGGCTGCGCAAATGGCTTGTCCCGCTCTCGGTCTGGAAGCTCTTC
AGCCCCTGCAGCCCGAGCCGCCCCCCGAGCCCGCCTTCTCCGAGGCGCAGAAGTGGATTGAGCGCGCAGGGACCATGTCGGCGGAGACCG
CGAGCGGCCCCACAGAGGACCAGGTGGAAATCCTGGAGTACAACTTCAACAAGGTCGACAAGCACCCGGATTCCACCACGCTGTGCCTCA
TCGCGGCCGAGGCAGGCCTTTCCGAGGAGGAGACCCAGAAATGGTTTAAGCAGCGCCTGGCAAAGTGGCGGCGCTCAGAAGGCCTGCCCT
CAGAGTGCAGATCCGTCACAGACTAAGGAGATGGCAGGCATTGACAGCTTCACTCCATGAAGGCCATCTCTGTTTCTCTCCTCCGCTTAA
CCAAGCTGTTGTGGTTTTTCAGCATAGTGTTGTATGTTCCATTGCTAGCTGTCCTGCTGTTTAACACAGTGTTGTATTTTTTTTCTAAAT
GTACATAATTAGAAAAGAAAATAACAATAGGAAGCTATGTGTATCTTCTGTGTAAAGCAGTGGCTTCACTGGAAAAATGGTGTGGCTAGC
ATTTCCCTTTGAGTCATGATGACAGATGGTGTGAAAACCATCTAAGTTTGCTTTTGACCATCACCTCCCAGTAGCAATTTGCTTTCATAA
TCCATTTAGCAATCCAGGCCTCTGTTGAAAAGATAATATGAGGGAGAAGGGAACACATTTCCTTCTGAACTTACTTCCCTAAGTCACTTT
CCTTATGTATCATCTAATACAATGATGGTTGAGTGAAAATACAGAAGGGGTGTTTGAGTATTCAGATTTCATAAAACACTTCCTTGGAAT
ATAGCTGCATTAACTTGGAAAGAAGCCTGTTGGGCCAGAAGACAGAAACTCCAACTGGCAAAAAAGCAAGCATCTAAGAAAAAAAACCAC
CAAAGTTCTTGAATTTACTATATTTAAATGCATTGGTTAAGTTTATTTTGCTAAATAAAGTGAACTGCTTTTTGTCTCTAAAATGATATT

>44698_44698_3_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000508501_HOPX_chr4_57522178_ENST00000420433_length(amino acids)=123AA_BP=14
MRKWLVPLSVWKLFSPCSPSRPPSPPSPRRRSGLSAQGPCRRRPRAAPQRTRWKSWSTTSTRSTSTRIPPRCASSRPRQAFPRRRPRNGL

--------------------------------------------------------------
>44698_44698_4_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000508501_HOPX_chr4_57522178_ENST00000554144_length(transcript)=1247nt_BP=152nt
GGCGACGGCGGCGGCCGTCCTCATCCCGGCGCTTGAGAGGACGCGGGGCTGCGCAAATGGCTTGTCCCGCTCTCGGTCTGGAAGCTCTTC
AGCCCCTGCAGCCCGAGCCGCCCCCCGAGCCCGCCTTCTCCGAGGCGCAGAAGTGGATTGAGCGCGCAGGGACCATGTCGGCGGAGACCG
CGAGCGGCCCCACAGAGGACCAGGTGGAAATCCTGGAGTACAACTTCAACAAGGTCGACAAGCACCCGGATTCCACCACGCTGTGCCTCA
TCGCGGCCGAGGCAGGCCTTTCCGAGGAGGAGACCCAGGGTAGTGATTTGATCTCCAGGAGCAAAATATGGCACCCAGAAAGTAGCCCCC
AAAGAGAAGGCTACCCCCATGATAGTCTGCCGTGCTTGGCTTTCGATTACTTTTCTCTACTGCCGCCCCAGTGTAAAGAAATGGTTTAAG
CAGCGCCTGGCAAAGTGGCGGCGCTCAGAAGGCCTGCCCTCAGAGTGCAGATCCGTCACAGACTAAGGAGATGGCAGGCATTGACAGCTT
CACTCCATGAAGGCCATCTCTGTTTCTCTCCTCCGCTTAACCAAGCTGTTGTGGTTTTTCAGCATAGTGTTGTATGTTCCATTGCTAGCT
GTCCTGCTGTTTAACACAGTGTTGTATTTTTTTTCTAAATGTACATAATTAGAAAAGAAAATAACAATAGGAAGCTATGTGTATCTTCTG
TGTAAAGCAGTGGCTTCACTGGAAAAATGGTGTGGCTAGCATTTCCCTTTGAGTCATGATGACAGATGGTGTGAAAACCATCTAAGTTTG
CTTTTGACCATCACCTCCCAGTAGCAATTTGCTTTCATAATCCATTTAGCAATCCAGGCCTCTGTTGAAAAGATAATATGAGGGAGAAGG
GAACACATTTCCTTCTGAACTTACTTCCCTAAGTCACTTTCCTTATGTATCATCTAATACAATGATGGTTGAGTGAAAATACAGAAGGGG
TGTTTGAGTATTCAGATTTCATAAAACACTTCCTTGGAATATAGCTGCATTAACTTGGAAAGAAGCCTGTTGGGCCAGAAGACAGAAACT
CCAACTGGCAAAAAAGCAAGCATCTAAGAAAAAAAACCACCAAAGTTCTTGAATTTACTATATTTAAATGCATTGGTTAAGTTTATTTTG

>44698_44698_4_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000508501_HOPX_chr4_57522178_ENST00000554144_length(amino acids)=138AA_BP=40
MRGRGAAQMACPALGLEALQPLQPEPPPEPAFSEAQKWIERAGTMSAETASGPTEDQVEILEYNFNKVDKHPDSTTLCLIAAEAGLSEEE

--------------------------------------------------------------
>44698_44698_5_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000512632_HOPX_chr4_57522178_ENST00000420433_length(transcript)=1095nt_BP=130nt
ATCCCGGCGCTTGAGAGGACGCGGGGCTGCGCAAATGGCTTGTCCCGCTCTCGGTCTGGAAGCTCTTCAGCCCCTGCAGCCCGAGCCGCC
CCCCGAGCCCGCCTTCTCCGAGGCGCAGAAGTGGATTGAGCGCGCAGGGACCATGTCGGCGGAGACCGCGAGCGGCCCCACAGAGGACCA
GGTGGAAATCCTGGAGTACAACTTCAACAAGGTCGACAAGCACCCGGATTCCACCACGCTGTGCCTCATCGCGGCCGAGGCAGGCCTTTC
CGAGGAGGAGACCCAGAAATGGTTTAAGCAGCGCCTGGCAAAGTGGCGGCGCTCAGAAGGCCTGCCCTCAGAGTGCAGATCCGTCACAGA
CTAAGGAGATGGCAGGCATTGACAGCTTCACTCCATGAAGGCCATCTCTGTTTCTCTCCTCCGCTTAACCAAGCTGTTGTGGTTTTTCAG
CATAGTGTTGTATGTTCCATTGCTAGCTGTCCTGCTGTTTAACACAGTGTTGTATTTTTTTTCTAAATGTACATAATTAGAAAAGAAAAT
AACAATAGGAAGCTATGTGTATCTTCTGTGTAAAGCAGTGGCTTCACTGGAAAAATGGTGTGGCTAGCATTTCCCTTTGAGTCATGATGA
CAGATGGTGTGAAAACCATCTAAGTTTGCTTTTGACCATCACCTCCCAGTAGCAATTTGCTTTCATAATCCATTTAGCAATCCAGGCCTC
TGTTGAAAAGATAATATGAGGGAGAAGGGAACACATTTCCTTCTGAACTTACTTCCCTAAGTCACTTTCCTTATGTATCATCTAATACAA
TGATGGTTGAGTGAAAATACAGAAGGGGTGTTTGAGTATTCAGATTTCATAAAACACTTCCTTGGAATATAGCTGCATTAACTTGGAAAG
AAGCCTGTTGGGCCAGAAGACAGAAACTCCAACTGGCAAAAAAGCAAGCATCTAAGAAAAAAAACCACCAAAGTTCTTGAATTTACTATA
TTTAAATGCATTGGTTAAGTTTATTTTGCTAAATAAAGTGAACTGCTTTTTGTCTCTAAAATGATATTCTAAATAAAACCTTAACTTTTT

>44698_44698_5_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000512632_HOPX_chr4_57522178_ENST00000420433_length(amino acids)=123AA_BP=14
MRKWLVPLSVWKLFSPCSPSRPPSPPSPRRRSGLSAQGPCRRRPRAAPQRTRWKSWSTTSTRSTSTRIPPRCASSRPRQAFPRRRPRNGL

--------------------------------------------------------------
>44698_44698_6_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000512632_HOPX_chr4_57522178_ENST00000554144_length(transcript)=1225nt_BP=130nt
ATCCCGGCGCTTGAGAGGACGCGGGGCTGCGCAAATGGCTTGTCCCGCTCTCGGTCTGGAAGCTCTTCAGCCCCTGCAGCCCGAGCCGCC
CCCCGAGCCCGCCTTCTCCGAGGCGCAGAAGTGGATTGAGCGCGCAGGGACCATGTCGGCGGAGACCGCGAGCGGCCCCACAGAGGACCA
GGTGGAAATCCTGGAGTACAACTTCAACAAGGTCGACAAGCACCCGGATTCCACCACGCTGTGCCTCATCGCGGCCGAGGCAGGCCTTTC
CGAGGAGGAGACCCAGGGTAGTGATTTGATCTCCAGGAGCAAAATATGGCACCCAGAAAGTAGCCCCCAAAGAGAAGGCTACCCCCATGA
TAGTCTGCCGTGCTTGGCTTTCGATTACTTTTCTCTACTGCCGCCCCAGTGTAAAGAAATGGTTTAAGCAGCGCCTGGCAAAGTGGCGGC
GCTCAGAAGGCCTGCCCTCAGAGTGCAGATCCGTCACAGACTAAGGAGATGGCAGGCATTGACAGCTTCACTCCATGAAGGCCATCTCTG
TTTCTCTCCTCCGCTTAACCAAGCTGTTGTGGTTTTTCAGCATAGTGTTGTATGTTCCATTGCTAGCTGTCCTGCTGTTTAACACAGTGT
TGTATTTTTTTTCTAAATGTACATAATTAGAAAAGAAAATAACAATAGGAAGCTATGTGTATCTTCTGTGTAAAGCAGTGGCTTCACTGG
AAAAATGGTGTGGCTAGCATTTCCCTTTGAGTCATGATGACAGATGGTGTGAAAACCATCTAAGTTTGCTTTTGACCATCACCTCCCAGT
AGCAATTTGCTTTCATAATCCATTTAGCAATCCAGGCCTCTGTTGAAAAGATAATATGAGGGAGAAGGGAACACATTTCCTTCTGAACTT
ACTTCCCTAAGTCACTTTCCTTATGTATCATCTAATACAATGATGGTTGAGTGAAAATACAGAAGGGGTGTTTGAGTATTCAGATTTCAT
AAAACACTTCCTTGGAATATAGCTGCATTAACTTGGAAAGAAGCCTGTTGGGCCAGAAGACAGAAACTCCAACTGGCAAAAAAGCAAGCA
TCTAAGAAAAAAAACCACCAAAGTTCTTGAATTTACTATATTTAAATGCATTGGTTAAGTTTATTTTGCTAAATAAAGTGAACTGCTTTT

>44698_44698_6_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000512632_HOPX_chr4_57522178_ENST00000554144_length(amino acids)=138AA_BP=40
MRGRGAAQMACPALGLEALQPLQPEPPPEPAFSEAQKWIERAGTMSAETASGPTEDQVEILEYNFNKVDKHPDSTTLCLIAAEAGLSEEE

--------------------------------------------------------------
>44698_44698_7_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000512820_HOPX_chr4_57522178_ENST00000420433_length(transcript)=1087nt_BP=122nt
GCTTGAGAGGACGCGGGGCTGCGCAAATGGCTTGTCCCGCTCTCGGTCTGGAAGCTCTTCAGCCCCTGCAGCCCGAGCCGCCCCCCGAGC
CCGCCTTCTCCGAGGCGCAGAAGTGGATTGAGCGCGCAGGGACCATGTCGGCGGAGACCGCGAGCGGCCCCACAGAGGACCAGGTGGAAA
TCCTGGAGTACAACTTCAACAAGGTCGACAAGCACCCGGATTCCACCACGCTGTGCCTCATCGCGGCCGAGGCAGGCCTTTCCGAGGAGG
AGACCCAGAAATGGTTTAAGCAGCGCCTGGCAAAGTGGCGGCGCTCAGAAGGCCTGCCCTCAGAGTGCAGATCCGTCACAGACTAAGGAG
ATGGCAGGCATTGACAGCTTCACTCCATGAAGGCCATCTCTGTTTCTCTCCTCCGCTTAACCAAGCTGTTGTGGTTTTTCAGCATAGTGT
TGTATGTTCCATTGCTAGCTGTCCTGCTGTTTAACACAGTGTTGTATTTTTTTTCTAAATGTACATAATTAGAAAAGAAAATAACAATAG
GAAGCTATGTGTATCTTCTGTGTAAAGCAGTGGCTTCACTGGAAAAATGGTGTGGCTAGCATTTCCCTTTGAGTCATGATGACAGATGGT
GTGAAAACCATCTAAGTTTGCTTTTGACCATCACCTCCCAGTAGCAATTTGCTTTCATAATCCATTTAGCAATCCAGGCCTCTGTTGAAA
AGATAATATGAGGGAGAAGGGAACACATTTCCTTCTGAACTTACTTCCCTAAGTCACTTTCCTTATGTATCATCTAATACAATGATGGTT
GAGTGAAAATACAGAAGGGGTGTTTGAGTATTCAGATTTCATAAAACACTTCCTTGGAATATAGCTGCATTAACTTGGAAAGAAGCCTGT
TGGGCCAGAAGACAGAAACTCCAACTGGCAAAAAAGCAAGCATCTAAGAAAAAAAACCACCAAAGTTCTTGAATTTACTATATTTAAATG
CATTGGTTAAGTTTATTTTGCTAAATAAAGTGAACTGCTTTTTGTCTCTAAAATGATATTCTAAATAAAACCTTAACTTTTTGTTGAAGA

>44698_44698_7_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000512820_HOPX_chr4_57522178_ENST00000420433_length(amino acids)=123AA_BP=14
MRKWLVPLSVWKLFSPCSPSRPPSPPSPRRRSGLSAQGPCRRRPRAAPQRTRWKSWSTTSTRSTSTRIPPRCASSRPRQAFPRRRPRNGL

--------------------------------------------------------------
>44698_44698_8_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000512820_HOPX_chr4_57522178_ENST00000554144_length(transcript)=1217nt_BP=122nt
GCTTGAGAGGACGCGGGGCTGCGCAAATGGCTTGTCCCGCTCTCGGTCTGGAAGCTCTTCAGCCCCTGCAGCCCGAGCCGCCCCCCGAGC
CCGCCTTCTCCGAGGCGCAGAAGTGGATTGAGCGCGCAGGGACCATGTCGGCGGAGACCGCGAGCGGCCCCACAGAGGACCAGGTGGAAA
TCCTGGAGTACAACTTCAACAAGGTCGACAAGCACCCGGATTCCACCACGCTGTGCCTCATCGCGGCCGAGGCAGGCCTTTCCGAGGAGG
AGACCCAGGGTAGTGATTTGATCTCCAGGAGCAAAATATGGCACCCAGAAAGTAGCCCCCAAAGAGAAGGCTACCCCCATGATAGTCTGC
CGTGCTTGGCTTTCGATTACTTTTCTCTACTGCCGCCCCAGTGTAAAGAAATGGTTTAAGCAGCGCCTGGCAAAGTGGCGGCGCTCAGAA
GGCCTGCCCTCAGAGTGCAGATCCGTCACAGACTAAGGAGATGGCAGGCATTGACAGCTTCACTCCATGAAGGCCATCTCTGTTTCTCTC
CTCCGCTTAACCAAGCTGTTGTGGTTTTTCAGCATAGTGTTGTATGTTCCATTGCTAGCTGTCCTGCTGTTTAACACAGTGTTGTATTTT
TTTTCTAAATGTACATAATTAGAAAAGAAAATAACAATAGGAAGCTATGTGTATCTTCTGTGTAAAGCAGTGGCTTCACTGGAAAAATGG
TGTGGCTAGCATTTCCCTTTGAGTCATGATGACAGATGGTGTGAAAACCATCTAAGTTTGCTTTTGACCATCACCTCCCAGTAGCAATTT
GCTTTCATAATCCATTTAGCAATCCAGGCCTCTGTTGAAAAGATAATATGAGGGAGAAGGGAACACATTTCCTTCTGAACTTACTTCCCT
AAGTCACTTTCCTTATGTATCATCTAATACAATGATGGTTGAGTGAAAATACAGAAGGGGTGTTTGAGTATTCAGATTTCATAAAACACT
TCCTTGGAATATAGCTGCATTAACTTGGAAAGAAGCCTGTTGGGCCAGAAGACAGAAACTCCAACTGGCAAAAAAGCAAGCATCTAAGAA
AAAAAACCACCAAAGTTCTTGAATTTACTATATTTAAATGCATTGGTTAAGTTTATTTTGCTAAATAAAGTGAACTGCTTTTTGTCTCTA

>44698_44698_8_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000512820_HOPX_chr4_57522178_ENST00000554144_length(amino acids)=138AA_BP=40
LRGRGAAQMACPALGLEALQPLQPEPPPEPAFSEAQKWIERAGTMSAETASGPTEDQVEILEYNFNKVDKHPDSTTLCLIAAEAGLSEEE

--------------------------------------------------------------
>44698_44698_9_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000512946_HOPX_chr4_57522178_ENST00000420433_length(transcript)=1117nt_BP=152nt
GGCGACGGCGGCGGCCGTCCTCATCCCGGCGCTTGAGAGGACGCGGGGCTGCGCAAATGGCTTGTCCCGCTCTCGGTCTGGAAGCTCTTC
AGCCCCTGCAGCCCGAGCCGCCCCCCGAGCCCGCCTTCTCCGAGGCGCAGAAGTGGATTGAGCGCGCAGGGACCATGTCGGCGGAGACCG
CGAGCGGCCCCACAGAGGACCAGGTGGAAATCCTGGAGTACAACTTCAACAAGGTCGACAAGCACCCGGATTCCACCACGCTGTGCCTCA
TCGCGGCCGAGGCAGGCCTTTCCGAGGAGGAGACCCAGAAATGGTTTAAGCAGCGCCTGGCAAAGTGGCGGCGCTCAGAAGGCCTGCCCT
CAGAGTGCAGATCCGTCACAGACTAAGGAGATGGCAGGCATTGACAGCTTCACTCCATGAAGGCCATCTCTGTTTCTCTCCTCCGCTTAA
CCAAGCTGTTGTGGTTTTTCAGCATAGTGTTGTATGTTCCATTGCTAGCTGTCCTGCTGTTTAACACAGTGTTGTATTTTTTTTCTAAAT
GTACATAATTAGAAAAGAAAATAACAATAGGAAGCTATGTGTATCTTCTGTGTAAAGCAGTGGCTTCACTGGAAAAATGGTGTGGCTAGC
ATTTCCCTTTGAGTCATGATGACAGATGGTGTGAAAACCATCTAAGTTTGCTTTTGACCATCACCTCCCAGTAGCAATTTGCTTTCATAA
TCCATTTAGCAATCCAGGCCTCTGTTGAAAAGATAATATGAGGGAGAAGGGAACACATTTCCTTCTGAACTTACTTCCCTAAGTCACTTT
CCTTATGTATCATCTAATACAATGATGGTTGAGTGAAAATACAGAAGGGGTGTTTGAGTATTCAGATTTCATAAAACACTTCCTTGGAAT
ATAGCTGCATTAACTTGGAAAGAAGCCTGTTGGGCCAGAAGACAGAAACTCCAACTGGCAAAAAAGCAAGCATCTAAGAAAAAAAACCAC
CAAAGTTCTTGAATTTACTATATTTAAATGCATTGGTTAAGTTTATTTTGCTAAATAAAGTGAACTGCTTTTTGTCTCTAAAATGATATT

>44698_44698_9_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000512946_HOPX_chr4_57522178_ENST00000420433_length(amino acids)=123AA_BP=14
MRKWLVPLSVWKLFSPCSPSRPPSPPSPRRRSGLSAQGPCRRRPRAAPQRTRWKSWSTTSTRSTSTRIPPRCASSRPRQAFPRRRPRNGL

--------------------------------------------------------------
>44698_44698_10_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000512946_HOPX_chr4_57522178_ENST00000554144_length(transcript)=1247nt_BP=152nt
GGCGACGGCGGCGGCCGTCCTCATCCCGGCGCTTGAGAGGACGCGGGGCTGCGCAAATGGCTTGTCCCGCTCTCGGTCTGGAAGCTCTTC
AGCCCCTGCAGCCCGAGCCGCCCCCCGAGCCCGCCTTCTCCGAGGCGCAGAAGTGGATTGAGCGCGCAGGGACCATGTCGGCGGAGACCG
CGAGCGGCCCCACAGAGGACCAGGTGGAAATCCTGGAGTACAACTTCAACAAGGTCGACAAGCACCCGGATTCCACCACGCTGTGCCTCA
TCGCGGCCGAGGCAGGCCTTTCCGAGGAGGAGACCCAGGGTAGTGATTTGATCTCCAGGAGCAAAATATGGCACCCAGAAAGTAGCCCCC
AAAGAGAAGGCTACCCCCATGATAGTCTGCCGTGCTTGGCTTTCGATTACTTTTCTCTACTGCCGCCCCAGTGTAAAGAAATGGTTTAAG
CAGCGCCTGGCAAAGTGGCGGCGCTCAGAAGGCCTGCCCTCAGAGTGCAGATCCGTCACAGACTAAGGAGATGGCAGGCATTGACAGCTT
CACTCCATGAAGGCCATCTCTGTTTCTCTCCTCCGCTTAACCAAGCTGTTGTGGTTTTTCAGCATAGTGTTGTATGTTCCATTGCTAGCT
GTCCTGCTGTTTAACACAGTGTTGTATTTTTTTTCTAAATGTACATAATTAGAAAAGAAAATAACAATAGGAAGCTATGTGTATCTTCTG
TGTAAAGCAGTGGCTTCACTGGAAAAATGGTGTGGCTAGCATTTCCCTTTGAGTCATGATGACAGATGGTGTGAAAACCATCTAAGTTTG
CTTTTGACCATCACCTCCCAGTAGCAATTTGCTTTCATAATCCATTTAGCAATCCAGGCCTCTGTTGAAAAGATAATATGAGGGAGAAGG
GAACACATTTCCTTCTGAACTTACTTCCCTAAGTCACTTTCCTTATGTATCATCTAATACAATGATGGTTGAGTGAAAATACAGAAGGGG
TGTTTGAGTATTCAGATTTCATAAAACACTTCCTTGGAATATAGCTGCATTAACTTGGAAAGAAGCCTGTTGGGCCAGAAGACAGAAACT
CCAACTGGCAAAAAAGCAAGCATCTAAGAAAAAAAACCACCAAAGTTCTTGAATTTACTATATTTAAATGCATTGGTTAAGTTTATTTTG

>44698_44698_10_LIMCH1-HOPX_LIMCH1_chr4_41362953_ENST00000512946_HOPX_chr4_57522178_ENST00000554144_length(amino acids)=138AA_BP=40
MRGRGAAQMACPALGLEALQPLQPEPPPEPAFSEAQKWIERAGTMSAETASGPTEDQVEILEYNFNKVDKHPDSTTLCLIAAEAGLSEEE

--------------------------------------------------------------

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Fusion Gene PPI Analysis for LIMCH1-HOPX


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for LIMCH1-HOPX


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for LIMCH1-HOPX


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource