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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:MARCH9-KCNC2 (FusionGDB2 ID:51716)

Fusion Gene Summary for MARCH9-KCNC2

check button Fusion gene summary
Fusion gene informationFusion gene name: MARCH9-KCNC2
Fusion gene ID: 51716
HgeneTgene
Gene symbol

MARCH9

KCNC2

Gene ID

92979

3747

Gene namemembrane associated ring-CH-type finger 9potassium voltage-gated channel subfamily C member 2
SynonymsMARCH-IX|MARCH9|RNF179KV3.2
Cytomap

12q14.1

12q21.1

Type of geneprotein-codingprotein-coding
DescriptionE3 ubiquitin-protein ligase MARCH9RING finger protein 179RING-type E3 ubiquitin transferase MARCH9membrane associated ring finger 9membrane-associated RING finger protein 9membrane-associated RING-CH protein IXmembrane-associated ring finger (C3HC4)potassium voltage-gated channel subfamily C member 2potassium channel, voltage gated Shaw related subfamily C, member 2potassium voltage-gated channel, Shaw-related subfamily, member 2shaw-like potassium channelvoltage-gated potassium channel Kv3.2
Modification date2020031320200313
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000266643, ENST00000548358, 
ENST00000548243, ENST00000298972, 
ENST00000341669, ENST00000350228, 
ENST00000393288, ENST00000540018, 
ENST00000548513, ENST00000549446, 
ENST00000550433, 
Fusion gene scores* DoF score9 X 6 X 6=32415 X 5 X 6=450
# samples 1016
** MAII scorelog2(10/324*10)=-1.6959938131099
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(16/450*10)=-1.49185309632967
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: MARCH9 [Title/Abstract] AND KCNC2 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointMARCH9(58150867)-KCNC2(75445097), # samples:2
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across MARCH9 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across KCNC2 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4BLCATCGA-BT-A20X-01AMARCH9chr12

58150867

-KCNC2chr12

75445097

-
ChimerDB4BLCATCGA-BT-A20X-01AMARCH9chr12

58150867

+KCNC2chr12

75445097

-


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Fusion Gene ORF analysis for MARCH9-KCNC2

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-intronENST00000266643ENST00000548243MARCH9chr12

58150867

+KCNC2chr12

75445097

-
In-frameENST00000266643ENST00000298972MARCH9chr12

58150867

+KCNC2chr12

75445097

-
In-frameENST00000266643ENST00000341669MARCH9chr12

58150867

+KCNC2chr12

75445097

-
In-frameENST00000266643ENST00000350228MARCH9chr12

58150867

+KCNC2chr12

75445097

-
In-frameENST00000266643ENST00000393288MARCH9chr12

58150867

+KCNC2chr12

75445097

-
In-frameENST00000266643ENST00000540018MARCH9chr12

58150867

+KCNC2chr12

75445097

-
In-frameENST00000266643ENST00000548513MARCH9chr12

58150867

+KCNC2chr12

75445097

-
In-frameENST00000266643ENST00000549446MARCH9chr12

58150867

+KCNC2chr12

75445097

-
In-frameENST00000266643ENST00000550433MARCH9chr12

58150867

+KCNC2chr12

75445097

-
intron-3CDSENST00000548358ENST00000298972MARCH9chr12

58150867

+KCNC2chr12

75445097

-
intron-3CDSENST00000548358ENST00000341669MARCH9chr12

58150867

+KCNC2chr12

75445097

-
intron-3CDSENST00000548358ENST00000350228MARCH9chr12

58150867

+KCNC2chr12

75445097

-
intron-3CDSENST00000548358ENST00000393288MARCH9chr12

58150867

+KCNC2chr12

75445097

-
intron-3CDSENST00000548358ENST00000540018MARCH9chr12

58150867

+KCNC2chr12

75445097

-
intron-3CDSENST00000548358ENST00000548513MARCH9chr12

58150867

+KCNC2chr12

75445097

-
intron-3CDSENST00000548358ENST00000549446MARCH9chr12

58150867

+KCNC2chr12

75445097

-
intron-3CDSENST00000548358ENST00000550433MARCH9chr12

58150867

+KCNC2chr12

75445097

-
intron-intronENST00000548358ENST00000548243MARCH9chr12

58150867

+KCNC2chr12

75445097

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000266643MARCH9chr1258150867+ENST00000550433KCNC2chr1275445097-3167944142146710
ENST00000266643MARCH9chr1258150867+ENST00000548513KCNC2chr1275445097-3262944142098694
ENST00000266643MARCH9chr1258150867+ENST00000549446KCNC2chr1275445097-5201944142173719
ENST00000266643MARCH9chr1258150867+ENST00000298972KCNC2chr1275445097-3223944142098694
ENST00000266643MARCH9chr1258150867+ENST00000341669KCNC2chr1275445097-3128944142146710
ENST00000266643MARCH9chr1258150867+ENST00000350228KCNC2chr1275445097-3057944141933639
ENST00000266643MARCH9chr1258150867+ENST00000540018KCNC2chr1275445097-2153944142008664
ENST00000266643MARCH9chr1258150867+ENST00000393288KCNC2chr1275445097-2494944142113699

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000266643ENST00000550433MARCH9chr1258150867+KCNC2chr1275445097-0.0047221460.9952779
ENST00000266643ENST00000548513MARCH9chr1258150867+KCNC2chr1275445097-0.0048206020.9951794
ENST00000266643ENST00000549446MARCH9chr1258150867+KCNC2chr1275445097-0.0034841720.99651575
ENST00000266643ENST00000298972MARCH9chr1258150867+KCNC2chr1275445097-0.0052535310.9947464
ENST00000266643ENST00000341669MARCH9chr1258150867+KCNC2chr1275445097-0.0052005950.9947994
ENST00000266643ENST00000350228MARCH9chr1258150867+KCNC2chr1275445097-0.0025867240.99741334
ENST00000266643ENST00000540018MARCH9chr1258150867+KCNC2chr1275445097-0.0261284240.9738715
ENST00000266643ENST00000393288MARCH9chr1258150867+KCNC2chr1275445097-0.012659550.9873404

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Fusion Genomic Features for MARCH9-KCNC2


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for MARCH9-KCNC2


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr12:58150867/chr12:75445097)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneMARCH9chr12:58150867chr12:75445097ENST00000266643+2474_89171347.0Compositional biasNote=Pro-rich
HgeneMARCH9chr12:58150867chr12:75445097ENST00000266643+24102_162171347.0Zinc fingerRING-CH-type
TgeneKCNC2chr12:58150867chr12:75445097ENST0000029897216437_442229599.0RegionSelectivity filter
TgeneKCNC2chr12:58150867chr12:75445097ENST0000034166915437_442229630.0RegionSelectivity filter
TgeneKCNC2chr12:58150867chr12:75445097ENST0000035022815437_442229543.6666666666666RegionSelectivity filter
TgeneKCNC2chr12:58150867chr12:75445097ENST0000039328815437_442229619.0RegionSelectivity filter
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054001814437_442229584.0RegionSelectivity filter
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054851305437_442229477.0RegionSelectivity filter
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054944615437_442229639.0RegionSelectivity filter
TgeneKCNC2chr12:58150867chr12:75445097ENST0000055043304437_442229630.0RegionSelectivity filter
TgeneKCNC2chr12:58150867chr12:75445097ENST0000029897216304_313229599.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000029897216369_381229599.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000029897216474_638229599.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000034166915304_313229630.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000034166915369_381229630.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000034166915474_638229630.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000035022815304_313229543.6666666666666Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000035022815369_381229543.6666666666666Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000035022815474_638229543.6666666666666Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000039328815304_313229619.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000039328815369_381229619.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000039328815474_638229619.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054001814304_313229584.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054001814369_381229584.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054001814474_638229584.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054851305304_313229477.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054851305369_381229477.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054851305474_638229477.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054944615304_313229639.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054944615369_381229639.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054944615474_638229639.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000055043304304_313229630.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000055043304369_381229630.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000055043304474_638229630.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST0000029897216230_250229599.0TransmembraneHelical%3B Name%3DSegment S1
TgeneKCNC2chr12:58150867chr12:75445097ENST0000029897216284_303229599.0TransmembraneHelical%3B Name%3DSegment S2
TgeneKCNC2chr12:58150867chr12:75445097ENST0000029897216314_334229599.0TransmembraneHelical%3B Name%3DSegment S3
TgeneKCNC2chr12:58150867chr12:75445097ENST0000029897216346_368229599.0TransmembraneHelical%3B Voltage-sensor%3B Name%3DSegment S4
TgeneKCNC2chr12:58150867chr12:75445097ENST0000029897216382_402229599.0TransmembraneHelical%3B Name%3DSegment S5
TgeneKCNC2chr12:58150867chr12:75445097ENST0000029897216453_473229599.0TransmembraneHelical%3B Name%3DSegment S6
TgeneKCNC2chr12:58150867chr12:75445097ENST0000034166915230_250229630.0TransmembraneHelical%3B Name%3DSegment S1
TgeneKCNC2chr12:58150867chr12:75445097ENST0000034166915284_303229630.0TransmembraneHelical%3B Name%3DSegment S2
TgeneKCNC2chr12:58150867chr12:75445097ENST0000034166915314_334229630.0TransmembraneHelical%3B Name%3DSegment S3
TgeneKCNC2chr12:58150867chr12:75445097ENST0000034166915346_368229630.0TransmembraneHelical%3B Voltage-sensor%3B Name%3DSegment S4
TgeneKCNC2chr12:58150867chr12:75445097ENST0000034166915382_402229630.0TransmembraneHelical%3B Name%3DSegment S5
TgeneKCNC2chr12:58150867chr12:75445097ENST0000034166915453_473229630.0TransmembraneHelical%3B Name%3DSegment S6
TgeneKCNC2chr12:58150867chr12:75445097ENST0000035022815230_250229543.6666666666666TransmembraneHelical%3B Name%3DSegment S1
TgeneKCNC2chr12:58150867chr12:75445097ENST0000035022815284_303229543.6666666666666TransmembraneHelical%3B Name%3DSegment S2
TgeneKCNC2chr12:58150867chr12:75445097ENST0000035022815314_334229543.6666666666666TransmembraneHelical%3B Name%3DSegment S3
TgeneKCNC2chr12:58150867chr12:75445097ENST0000035022815346_368229543.6666666666666TransmembraneHelical%3B Voltage-sensor%3B Name%3DSegment S4
TgeneKCNC2chr12:58150867chr12:75445097ENST0000035022815382_402229543.6666666666666TransmembraneHelical%3B Name%3DSegment S5
TgeneKCNC2chr12:58150867chr12:75445097ENST0000035022815453_473229543.6666666666666TransmembraneHelical%3B Name%3DSegment S6
TgeneKCNC2chr12:58150867chr12:75445097ENST0000039328815230_250229619.0TransmembraneHelical%3B Name%3DSegment S1
TgeneKCNC2chr12:58150867chr12:75445097ENST0000039328815284_303229619.0TransmembraneHelical%3B Name%3DSegment S2
TgeneKCNC2chr12:58150867chr12:75445097ENST0000039328815314_334229619.0TransmembraneHelical%3B Name%3DSegment S3
TgeneKCNC2chr12:58150867chr12:75445097ENST0000039328815346_368229619.0TransmembraneHelical%3B Voltage-sensor%3B Name%3DSegment S4
TgeneKCNC2chr12:58150867chr12:75445097ENST0000039328815382_402229619.0TransmembraneHelical%3B Name%3DSegment S5
TgeneKCNC2chr12:58150867chr12:75445097ENST0000039328815453_473229619.0TransmembraneHelical%3B Name%3DSegment S6
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054001814230_250229584.0TransmembraneHelical%3B Name%3DSegment S1
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054001814284_303229584.0TransmembraneHelical%3B Name%3DSegment S2
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054001814314_334229584.0TransmembraneHelical%3B Name%3DSegment S3
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054001814346_368229584.0TransmembraneHelical%3B Voltage-sensor%3B Name%3DSegment S4
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054001814382_402229584.0TransmembraneHelical%3B Name%3DSegment S5
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054001814453_473229584.0TransmembraneHelical%3B Name%3DSegment S6
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054851305230_250229477.0TransmembraneHelical%3B Name%3DSegment S1
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054851305284_303229477.0TransmembraneHelical%3B Name%3DSegment S2
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054851305314_334229477.0TransmembraneHelical%3B Name%3DSegment S3
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054851305346_368229477.0TransmembraneHelical%3B Voltage-sensor%3B Name%3DSegment S4
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054851305382_402229477.0TransmembraneHelical%3B Name%3DSegment S5
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054851305453_473229477.0TransmembraneHelical%3B Name%3DSegment S6
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054944615230_250229639.0TransmembraneHelical%3B Name%3DSegment S1
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054944615284_303229639.0TransmembraneHelical%3B Name%3DSegment S2
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054944615314_334229639.0TransmembraneHelical%3B Name%3DSegment S3
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054944615346_368229639.0TransmembraneHelical%3B Voltage-sensor%3B Name%3DSegment S4
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054944615382_402229639.0TransmembraneHelical%3B Name%3DSegment S5
TgeneKCNC2chr12:58150867chr12:75445097ENST0000054944615453_473229639.0TransmembraneHelical%3B Name%3DSegment S6
TgeneKCNC2chr12:58150867chr12:75445097ENST0000055043304230_250229630.0TransmembraneHelical%3B Name%3DSegment S1
TgeneKCNC2chr12:58150867chr12:75445097ENST0000055043304284_303229630.0TransmembraneHelical%3B Name%3DSegment S2
TgeneKCNC2chr12:58150867chr12:75445097ENST0000055043304314_334229630.0TransmembraneHelical%3B Name%3DSegment S3
TgeneKCNC2chr12:58150867chr12:75445097ENST0000055043304346_368229630.0TransmembraneHelical%3B Voltage-sensor%3B Name%3DSegment S4
TgeneKCNC2chr12:58150867chr12:75445097ENST0000055043304382_402229630.0TransmembraneHelical%3B Name%3DSegment S5
TgeneKCNC2chr12:58150867chr12:75445097ENST0000055043304453_473229630.0TransmembraneHelical%3B Name%3DSegment S6

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneMARCH9chr12:58150867chr12:75445097ENST00000548358+1274_890234.0Compositional biasNote=Pro-rich
HgeneMARCH9chr12:58150867chr12:75445097ENST00000266643+24185_205171347.0TransmembraneHelical
HgeneMARCH9chr12:58150867chr12:75445097ENST00000266643+24219_239171347.0TransmembraneHelical
HgeneMARCH9chr12:58150867chr12:75445097ENST00000548358+12185_2050234.0TransmembraneHelical
HgeneMARCH9chr12:58150867chr12:75445097ENST00000548358+12219_2390234.0TransmembraneHelical
HgeneMARCH9chr12:58150867chr12:75445097ENST00000548358+12102_1620234.0Zinc fingerRING-CH-type
TgeneKCNC2chr12:58150867chr12:75445097ENST000002989721656_99229599.0Compositional biasNote=Gly/Pro-rich (insert)
TgeneKCNC2chr12:58150867chr12:75445097ENST000003416691556_99229630.0Compositional biasNote=Gly/Pro-rich (insert)
TgeneKCNC2chr12:58150867chr12:75445097ENST000003502281556_99229543.6666666666666Compositional biasNote=Gly/Pro-rich (insert)
TgeneKCNC2chr12:58150867chr12:75445097ENST000003932881556_99229619.0Compositional biasNote=Gly/Pro-rich (insert)
TgeneKCNC2chr12:58150867chr12:75445097ENST000005400181456_99229584.0Compositional biasNote=Gly/Pro-rich (insert)
TgeneKCNC2chr12:58150867chr12:75445097ENST000005485130556_99229477.0Compositional biasNote=Gly/Pro-rich (insert)
TgeneKCNC2chr12:58150867chr12:75445097ENST000005494461556_99229639.0Compositional biasNote=Gly/Pro-rich (insert)
TgeneKCNC2chr12:58150867chr12:75445097ENST000005504330456_99229630.0Compositional biasNote=Gly/Pro-rich (insert)
TgeneKCNC2chr12:58150867chr12:75445097ENST00000298972161_229229599.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST00000341669151_229229630.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST00000350228151_229229543.6666666666666Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST00000393288151_229229619.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST00000540018141_229229584.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST00000548513051_229229477.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST00000549446151_229229639.0Topological domainCytoplasmic
TgeneKCNC2chr12:58150867chr12:75445097ENST00000550433041_229229630.0Topological domainCytoplasmic


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Fusion Gene Sequence for MARCH9-KCNC2


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>51716_51716_1_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000298972_length(transcript)=3223nt_BP=944nt
GAAGGAGCCGCCATTTGCCACCGCCGAGCGCACGGGCCGAGCCAAGCCTGATCCCGGAGCCGGAGGGGGACTGGGACCGAGAGAACGGCG
ATGGGGGGCGGCCCCGCCGCAGGAGGACCCGGGCGCGTAACCCCGGGGGCCCGGCCCGCTCCAGACCCAGACCCGCGGGGTGCGGCACCC
TGAGCCCCCCTCCCCGCCCCCTGCCCTGGCCATGGCCGCCCACCCCGCCGCCCCCGGGCCGCCAGCCCGCTCGGCCCCGCAAGCACCGGA
GCCCCGGCGGTGGCAGCAGTGAACGGCTGTCGCAGGCCCCGAAGACCCCGGCCCGGCTCGGCTCTCTAGCGCGCGCCCCCTTCCCGGCCT
TGTCCTCTCCCCTCCCCCCGCCGCTAGCGAGCCCCCCTTGCACGCTGCCCCCCGCCCCCGGTGTCCGGACGATGCTCAAGTCTCGGCTCC
GCATGTTTCTGAACGAGCTGAAGCTGCTGGTGCTGACAGGCGGGGGGCGGCCCCGGGCCGAGCCGCAACCCCGGGGGGGCCGGGGAGGCG
GCTGCGGCTGGGCGCCCTTCGCTGGCTGCTCCACCCGGGACGGCGACGGCGACGAGGAGGAGTACTACGGGTCGGAGCCGCGGGCCCGGG
GCCTGGCCGGCGACAAGGAGCCGCGGGCCGGACCCCTGCCGCCGCCCGCGCCGCCGCTGCCGCCCCCGGGCGCGCTGGACGCCCTGTCGC
TCAGCAGTAGCCTGGACAGCGGACTCCGAACCCCTCAGTGCCGGATCTGCTTCCAGGGCCCGGAGCAGGGGGAGCTCTTAAGCCCCTGCC
GCTGCGACGGCTCAGTGCGCTGCACGCATCAGCCCTGCCTCATCCGCTGGATCAGCGAGAGGGGCTCCTGGAGCTGTGAGCTCTGCTACT
TCAAGTACCAGGTCCTGGCGATCAGCACCAAGAACCCACTGCAGTTTATTGCTTTTGCTTCTTTATTCTTCATCCTGGTTTCAATTACAA
CTTTTTGCCTGGAAACACATGAAGCTTTCAATATTGTTAAAAACAAGACAGAACCAGTCATCAATGGCACAAGTGTTGTTCTACAGTATG
AAATTGAAACGGATCCTGCCTTGACGTATGTAGAAGGAGTGTGTGTGGTGTGGTTTACTTTTGAATTTTTAGTCCGTATTGTTTTTTCAC
CCAATAAACTTGAATTCATCAAAAATCTCTTGAATATCATTGACTTTGTGGCCATCCTACCTTTCTACTTAGAGGTGGGACTCAGTGGGC
TGTCATCCAAAGCTGCTAAAGATGTGCTTGGCTTCCTCAGGGTGGTAAGGTTTGTGAGGATCCTGAGAATTTTCAAGCTCACCCGCCATT
TTGTAGGTCTGAGGGTGCTTGGACATACTCTTCGAGCTAGTACTAATGAATTTTTGCTGCTGATAATTTTCCTGGCTCTAGGAGTTTTGA
TATTTGCTACCATGATCTACTATGCCGAGAGAGTGGGAGCTCAACCTAACGACCCTTCAGCTAGTGAGCACACACAGTTCAAAAACATTC
CCATTGGGTTCTGGTGGGCTGTAGTGACCATGACTACCCTGGGTTATGGGGATATGTACCCCCAAACATGGTCAGGCATGCTGGTGGGAG
CCCTGTGTGCTCTGGCTGGAGTGCTGACAATAGCCATGCCAGTGCCTGTCATTGTCAATAATTTTGGAATGTACTACTCCTTGGCAATGG
CAAAGCAGAAACTTCCAAGGAAAAGAAAGAAGCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTACTTTTTGCAAGACAGAATTAAATA
TGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTGTTATCAGGTGACGACA
GTACAGGAAGTGAGCCGCCACTATCACCCCCAGAAAGGCTCCCCATCAGACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGAAACAT
GTTTCCTACTGACGACAGGTGATTACACGTGTGCTTCTGATGGAGGGATCAGGAAAGATAACTGCAAAGAGGTTGTCATTACTGGTTACA
CGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAACATGAGAGAAAGTGTTGTACAGAATTTATCATGGATTATT
GACTGCTGAGAAAGGGACAGTGGAATTTAGCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCA
GGTTGCACTTGGAAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATG
AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATGTGTGCATGGGTCAACAGTCTTGGCCATTTCTC
ATCAAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGGCCCACATTAG
GTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGTCTTAATTTCCCTTATTTCTACTTCTTTGGTTGAATCTAT
GAACTTGATTGTATAATTTTCTTATAAATTACTGATGTAATCAGCTTGTCAATTATGTTGTGAAATTGTTAGTATTCATTTATCAAAAAT
GACCTATGTTTAGTCACATATTTGTTTAGTTCTGGGAAATTGTTATAGCTTAAATGGAACTCACCAACATTATTCATAGTTTAAGTCTTT
TATCATTATTACCTCAATTATAAATATTACAAAAACATAATTCTGGCAATGAGAGTATTTTTTTATTCAATGATCAAGGAGCAATGTCAG
TATATAGTAGAATATCAATTAAATTATATCCTAAAATGTATATTTTGCATAAAAGAGATATTCTTTAATCAATTACTTTTTTGTGAGTTT
TGTGGCAAATGAAGCTTGTACGTGTCTTTAAAACTGTTGTAGATGAAACTGTATAAGATTTTTACATCTTGCTTAATCAATATTTTCAGA
GTCTATTAGTTCCCCTGGGATTCTGAATATAACATATAGCCTATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCA

>51716_51716_1_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000298972_length(amino acids)=694AA_BP=307
MPPPSARAEPSLIPEPEGDWDRENGDGGRPRRRRTRARNPGGPARSRPRPAGCGTLSPPPRPLPWPWPPTPPPPGRQPARPRKHRSPGGG
SSERLSQAPKTPARLGSLARAPFPALSSPLPPPLASPPCTLPPAPGVRTMLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWA
PFAGCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGS
VRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPLQFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETD
PALTYVEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLR
VLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCAL
AGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSVLSGDDSTGSE

--------------------------------------------------------------
>51716_51716_2_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000341669_length(transcript)=3128nt_BP=944nt
GAAGGAGCCGCCATTTGCCACCGCCGAGCGCACGGGCCGAGCCAAGCCTGATCCCGGAGCCGGAGGGGGACTGGGACCGAGAGAACGGCG
ATGGGGGGCGGCCCCGCCGCAGGAGGACCCGGGCGCGTAACCCCGGGGGCCCGGCCCGCTCCAGACCCAGACCCGCGGGGTGCGGCACCC
TGAGCCCCCCTCCCCGCCCCCTGCCCTGGCCATGGCCGCCCACCCCGCCGCCCCCGGGCCGCCAGCCCGCTCGGCCCCGCAAGCACCGGA
GCCCCGGCGGTGGCAGCAGTGAACGGCTGTCGCAGGCCCCGAAGACCCCGGCCCGGCTCGGCTCTCTAGCGCGCGCCCCCTTCCCGGCCT
TGTCCTCTCCCCTCCCCCCGCCGCTAGCGAGCCCCCCTTGCACGCTGCCCCCCGCCCCCGGTGTCCGGACGATGCTCAAGTCTCGGCTCC
GCATGTTTCTGAACGAGCTGAAGCTGCTGGTGCTGACAGGCGGGGGGCGGCCCCGGGCCGAGCCGCAACCCCGGGGGGGCCGGGGAGGCG
GCTGCGGCTGGGCGCCCTTCGCTGGCTGCTCCACCCGGGACGGCGACGGCGACGAGGAGGAGTACTACGGGTCGGAGCCGCGGGCCCGGG
GCCTGGCCGGCGACAAGGAGCCGCGGGCCGGACCCCTGCCGCCGCCCGCGCCGCCGCTGCCGCCCCCGGGCGCGCTGGACGCCCTGTCGC
TCAGCAGTAGCCTGGACAGCGGACTCCGAACCCCTCAGTGCCGGATCTGCTTCCAGGGCCCGGAGCAGGGGGAGCTCTTAAGCCCCTGCC
GCTGCGACGGCTCAGTGCGCTGCACGCATCAGCCCTGCCTCATCCGCTGGATCAGCGAGAGGGGCTCCTGGAGCTGTGAGCTCTGCTACT
TCAAGTACCAGGTCCTGGCGATCAGCACCAAGAACCCACTGCAGTTTATTGCTTTTGCTTCTTTATTCTTCATCCTGGTTTCAATTACAA
CTTTTTGCCTGGAAACACATGAAGCTTTCAATATTGTTAAAAACAAGACAGAACCAGTCATCAATGGCACAAGTGTTGTTCTACAGTATG
AAATTGAAACGGATCCTGCCTTGACGTATGTAGAAGGAGTGTGTGTGGTGTGGTTTACTTTTGAATTTTTAGTCCGTATTGTTTTTTCAC
CCAATAAACTTGAATTCATCAAAAATCTCTTGAATATCATTGACTTTGTGGCCATCCTACCTTTCTACTTAGAGGTGGGACTCAGTGGGC
TGTCATCCAAAGCTGCTAAAGATGTGCTTGGCTTCCTCAGGGTGGTAAGGTTTGTGAGGATCCTGAGAATTTTCAAGCTCACCCGCCATT
TTGTAGGTCTGAGGGTGCTTGGACATACTCTTCGAGCTAGTACTAATGAATTTTTGCTGCTGATAATTTTCCTGGCTCTAGGAGTTTTGA
TATTTGCTACCATGATCTACTATGCCGAGAGAGTGGGAGCTCAACCTAACGACCCTTCAGCTAGTGAGCACACACAGTTCAAAAACATTC
CCATTGGGTTCTGGTGGGCTGTAGTGACCATGACTACCCTGGGTTATGGGGATATGTACCCCCAAACATGGTCAGGCATGCTGGTGGGAG
CCCTGTGTGCTCTGGCTGGAGTGCTGACAATAGCCATGCCAGTGCCTGTCATTGTCAATAATTTTGGAATGTACTACTCCTTGGCAATGG
CAAAGCAGAAACTTCCAAGGAAAAGAAAGAAGCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTACTTTTTGCAAGACAGAATTAAATA
TGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTGTTATCAGGTGACGACA
GTACAGGAAGTGAGCCGCCACTATCACCCCCAGAAAGGCTCCCCATCAGACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGAAACAT
GTTTCCTACTGACGACAGGTGATTACACGTGTGCTTCTGATGGAGGGATCAGGAAAGTGTTGTACAGAATTTATCATGGATTATTGACTG
CTGAGAAAGGGACAGTGGAATTTAGCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAGGTTG
CACTTGGAAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGT
GCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATGTGTGCATGGGTCAACAGTCTTGGCCATTTCTCATCAA
AAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGGCCCACATTAGGTTGT
GCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGTCTTAATTTCCCTTATTTCTACTTCTTTGGTTGAATCTATGAACT
TGATTGTATAATTTTCTTATAAATTACTGATGTAATCAGCTTGTCAATTATGTTGTGAAATTGTTAGTATTCATTTATCAAAAATGACCT
ATGTTTAGTCACATATTTGTTTAGTTCTGGGAAATTGTTATAGCTTAAATGGAACTCACCAACATTATTCATAGTTTAAGTCTTTTATCA
TTATTACCTCAATTATAAATATTACAAAAACATAATTCTGGCAATGAGAGTATTTTTTTATTCAATGATCAAGGAGCAATGTCAGTATAT
AGTAGAATATCAATTAAATTATATCCTAAAATGTATATTTTGCATAAAAGAGATATTCTTTAATCAATTACTTTTTTGTGAGTTTTGTGG
CAAATGAAGCTTGTACGTGTCTTTAAAACTGTTGTAGATGAAACTGTATAAGATTTTTACATCTTGCTTAATCAATATTTTCAGAGTCTA
TTAGTTCCCCTGGGATTCTGAATATAACATATAGCCTATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCAC

>51716_51716_2_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000341669_length(amino acids)=710AA_BP=307
MPPPSARAEPSLIPEPEGDWDRENGDGGRPRRRRTRARNPGGPARSRPRPAGCGTLSPPPRPLPWPWPPTPPPPGRQPARPRKHRSPGGG
SSERLSQAPKTPARLGSLARAPFPALSSPLPPPLASPPCTLPPAPGVRTMLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWA
PFAGCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGS
VRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPLQFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETD
PALTYVEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLR
VLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCAL
AGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSVLSGDDSTGSE

--------------------------------------------------------------
>51716_51716_3_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000350228_length(transcript)=3057nt_BP=944nt
GAAGGAGCCGCCATTTGCCACCGCCGAGCGCACGGGCCGAGCCAAGCCTGATCCCGGAGCCGGAGGGGGACTGGGACCGAGAGAACGGCG
ATGGGGGGCGGCCCCGCCGCAGGAGGACCCGGGCGCGTAACCCCGGGGGCCCGGCCCGCTCCAGACCCAGACCCGCGGGGTGCGGCACCC
TGAGCCCCCCTCCCCGCCCCCTGCCCTGGCCATGGCCGCCCACCCCGCCGCCCCCGGGCCGCCAGCCCGCTCGGCCCCGCAAGCACCGGA
GCCCCGGCGGTGGCAGCAGTGAACGGCTGTCGCAGGCCCCGAAGACCCCGGCCCGGCTCGGCTCTCTAGCGCGCGCCCCCTTCCCGGCCT
TGTCCTCTCCCCTCCCCCCGCCGCTAGCGAGCCCCCCTTGCACGCTGCCCCCCGCCCCCGGTGTCCGGACGATGCTCAAGTCTCGGCTCC
GCATGTTTCTGAACGAGCTGAAGCTGCTGGTGCTGACAGGCGGGGGGCGGCCCCGGGCCGAGCCGCAACCCCGGGGGGGCCGGGGAGGCG
GCTGCGGCTGGGCGCCCTTCGCTGGCTGCTCCACCCGGGACGGCGACGGCGACGAGGAGGAGTACTACGGGTCGGAGCCGCGGGCCCGGG
GCCTGGCCGGCGACAAGGAGCCGCGGGCCGGACCCCTGCCGCCGCCCGCGCCGCCGCTGCCGCCCCCGGGCGCGCTGGACGCCCTGTCGC
TCAGCAGTAGCCTGGACAGCGGACTCCGAACCCCTCAGTGCCGGATCTGCTTCCAGGGCCCGGAGCAGGGGGAGCTCTTAAGCCCCTGCC
GCTGCGACGGCTCAGTGCGCTGCACGCATCAGCCCTGCCTCATCCGCTGGATCAGCGAGAGGGGCTCCTGGAGCTGTGAGCTCTGCTACT
TCAAGTACCAGGTCCTGGCGATCAGCACCAAGAACCCACTGCAGTTTATTGCTTTTGCTTCTTTATTCTTCATCCTGGTTTCAATTACAA
CTTTTTGCCTGGAAACACATGAAGCTTTCAATATTGTTAAAAACAAGACAGAACCAGTCATCAATGGCACAAGTGTTGTTCTACAGTATG
AAATTGAAACGGATCCTGCCTTGACGTATGTAGAAGGAGTGTGTGTGGTGTGGTTTACTTTTGAATTTTTAGTCCGTATTGTTTTTTCAC
CCAATAAACTTGAATTCATCAAAAATCTCTTGAATATCATTGACTTTGTGGCCATCCTACCTTTCTACTTAGAGGTGGGACTCAGTGGGC
TGTCATCCAAAGCTGCTAAAGATGTGCTTGGCTTCCTCAGGGTGGTAAGGTTTGTGAGGATCCTGAGAATTTTCAAGCTCACCCGCCATT
TTGTAGGTCTGAGGGTGCTTGGACATACTCTTCGAGCTAGTACTAATGAATTTTTGCTGCTGATAATTTTCCTGGCTCTAGGAGTTTTGA
TATTTGCTACCATGATCTACTATGCCGAGAGAGTGGGAGCTCAACCTAACGACCCTTCAGCTAGTGAGCACACACAGTTCAAAAACATTC
CCATTGGGTTCTGGTGGGCTGTAGTGACCATGACTACCCTGGGTTATGGGGATATGTACCCCCAAACATGGTCAGGCATGCTGGTGGGAG
CCCTGTGTGCTCTGGCTGGAGTGCTGACAATAGCCATGCCAGTGCCTGTCATTGTCAATAATTTTGGAATGTACTACTCCTTGGCAATGG
CAAAGCAGAAACTTCCAAGGAAAAGAAAGAAGCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTACTTTTTGCAAGACAGAATTAAATA
TGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGATAACTGCAAAGAGGTTG
TCATTACTGGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAACATGAGAGAAAGTGTTGTACAGAAT
TTATCATGGATTATTGACTGCTGAGAAAGGGACAGTGGAATTTAGCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGT
GCCCTGATGTGACCAGGTTGCACTTGGAAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGAACTCAT
CTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATGTGTGCATGGGTCAACAG
TCTTGGCCATTTCTCATCAAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTC
ATGGGCCCACATTAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGTCTTAATTTCCCTTATTTCTACTTC
TTTGGTTGAATCTATGAACTTGATTGTATAATTTTCTTATAAATTACTGATGTAATCAGCTTGTCAATTATGTTGTGAAATTGTTAGTAT
TCATTTATCAAAAATGACCTATGTTTAGTCACATATTTGTTTAGTTCTGGGAAATTGTTATAGCTTAAATGGAACTCACCAACATTATTC
ATAGTTTAAGTCTTTTATCATTATTACCTCAATTATAAATATTACAAAAACATAATTCTGGCAATGAGAGTATTTTTTTATTCAATGATC
AAGGAGCAATGTCAGTATATAGTAGAATATCAATTAAATTATATCCTAAAATGTATATTTTGCATAAAAGAGATATTCTTTAATCAATTA
CTTTTTTGTGAGTTTTGTGGCAAATGAAGCTTGTACGTGTCTTTAAAACTGTTGTAGATGAAACTGTATAAGATTTTTACATCTTGCTTA
ATCAATATTTTCAGAGTCTATTAGTTCCCCTGGGATTCTGAATATAACATATAGCCTATTATAAATCCCTGTATCGTGGACCTTTTGTGA

>51716_51716_3_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000350228_length(amino acids)=639AA_BP=307
MPPPSARAEPSLIPEPEGDWDRENGDGGRPRRRRTRARNPGGPARSRPRPAGCGTLSPPPRPLPWPWPPTPPPPGRQPARPRKHRSPGGG
SSERLSQAPKTPARLGSLARAPFPALSSPLPPPLASPPCTLPPAPGVRTMLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWA
PFAGCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGS
VRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPLQFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETD
PALTYVEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLR
VLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCAL
AGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSDNCKEVVITGY

--------------------------------------------------------------
>51716_51716_4_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000393288_length(transcript)=2494nt_BP=944nt
GAAGGAGCCGCCATTTGCCACCGCCGAGCGCACGGGCCGAGCCAAGCCTGATCCCGGAGCCGGAGGGGGACTGGGACCGAGAGAACGGCG
ATGGGGGGCGGCCCCGCCGCAGGAGGACCCGGGCGCGTAACCCCGGGGGCCCGGCCCGCTCCAGACCCAGACCCGCGGGGTGCGGCACCC
TGAGCCCCCCTCCCCGCCCCCTGCCCTGGCCATGGCCGCCCACCCCGCCGCCCCCGGGCCGCCAGCCCGCTCGGCCCCGCAAGCACCGGA
GCCCCGGCGGTGGCAGCAGTGAACGGCTGTCGCAGGCCCCGAAGACCCCGGCCCGGCTCGGCTCTCTAGCGCGCGCCCCCTTCCCGGCCT
TGTCCTCTCCCCTCCCCCCGCCGCTAGCGAGCCCCCCTTGCACGCTGCCCCCCGCCCCCGGTGTCCGGACGATGCTCAAGTCTCGGCTCC
GCATGTTTCTGAACGAGCTGAAGCTGCTGGTGCTGACAGGCGGGGGGCGGCCCCGGGCCGAGCCGCAACCCCGGGGGGGCCGGGGAGGCG
GCTGCGGCTGGGCGCCCTTCGCTGGCTGCTCCACCCGGGACGGCGACGGCGACGAGGAGGAGTACTACGGGTCGGAGCCGCGGGCCCGGG
GCCTGGCCGGCGACAAGGAGCCGCGGGCCGGACCCCTGCCGCCGCCCGCGCCGCCGCTGCCGCCCCCGGGCGCGCTGGACGCCCTGTCGC
TCAGCAGTAGCCTGGACAGCGGACTCCGAACCCCTCAGTGCCGGATCTGCTTCCAGGGCCCGGAGCAGGGGGAGCTCTTAAGCCCCTGCC
GCTGCGACGGCTCAGTGCGCTGCACGCATCAGCCCTGCCTCATCCGCTGGATCAGCGAGAGGGGCTCCTGGAGCTGTGAGCTCTGCTACT
TCAAGTACCAGGTCCTGGCGATCAGCACCAAGAACCCACTGCAGTTTATTGCTTTTGCTTCTTTATTCTTCATCCTGGTTTCAATTACAA
CTTTTTGCCTGGAAACACATGAAGCTTTCAATATTGTTAAAAACAAGACAGAACCAGTCATCAATGGCACAAGTGTTGTTCTACAGTATG
AAATTGAAACGGATCCTGCCTTGACGTATGTAGAAGGAGTGTGTGTGGTGTGGTTTACTTTTGAATTTTTAGTCCGTATTGTTTTTTCAC
CCAATAAACTTGAATTCATCAAAAATCTCTTGAATATCATTGACTTTGTGGCCATCCTACCTTTCTACTTAGAGGTGGGACTCAGTGGGC
TGTCATCCAAAGCTGCTAAAGATGTGCTTGGCTTCCTCAGGGTGGTAAGGTTTGTGAGGATCCTGAGAATTTTCAAGCTCACCCGCCATT
TTGTAGGTCTGAGGGTGCTTGGACATACTCTTCGAGCTAGTACTAATGAATTTTTGCTGCTGATAATTTTCCTGGCTCTAGGAGTTTTGA
TATTTGCTACCATGATCTACTATGCCGAGAGAGTGGGAGCTCAACCTAACGACCCTTCAGCTAGTGAGCACACACAGTTCAAAAACATTC
CCATTGGGTTCTGGTGGGCTGTAGTGACCATGACTACCCTGGGTTATGGGGATATGTACCCCCAAACATGGTCAGGCATGCTGGTGGGAG
CCCTGTGTGCTCTGGCTGGAGTGCTGACAATAGCCATGCCAGTGCCTGTCATTGTCAATAATTTTGGAATGTACTACTCCTTGGCAATGG
CAAAGCAGAAACTTCCAAGGAAAAGAAAGAAGCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTACTTTTTGCAAGACAGAATTAAATA
TGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTGTTATCAGGTGACGACA
GTACAGGAAGTGAGCCGCCACTATCACCCCCAGAAAGGCTCCCCATCAGACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGAAACAT
GTTTCCTACTGACGACAGGTGATTACACGTGTGCTTCTGATGGAGGGATCAGGAAAGGAATTAGAAATGGGCATTCCATCCTACATCACC
TGGATAATGGCACCAAATGCCATTATTTAAGAATCATCTTTTAACCCTATAAAGCTGGAAGATTAAATATGCTGGAAAAAGAGTTGTCCA
TTTAAACTTAAGTATGCTTTATTGGCTTAGGAAATAAAAAATGAAAAGAGAAAAAGTAGCCTACTTATTTCTCTTTTTTTCAAGAATACA
TTCTGAAATTTAAAAATATTAGTCAAGCTTATATCTTACTTAAGTTGCTTTGCCTAATTTTTAAATGAGTTCTAGTATTCTATATGCCAA
AATTATATTAATGCTAACTATAATCTGGGAAAAAATATATTTTGAAGTATTGTAACAATAATTTGTGATGGCTGGTTTAATCTTTTCAAA

>51716_51716_4_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000393288_length(amino acids)=699AA_BP=307
MPPPSARAEPSLIPEPEGDWDRENGDGGRPRRRRTRARNPGGPARSRPRPAGCGTLSPPPRPLPWPWPPTPPPPGRQPARPRKHRSPGGG
SSERLSQAPKTPARLGSLARAPFPALSSPLPPPLASPPCTLPPAPGVRTMLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWA
PFAGCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGS
VRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPLQFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETD
PALTYVEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLR
VLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCAL
AGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSVLSGDDSTGSE

--------------------------------------------------------------
>51716_51716_5_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000540018_length(transcript)=2153nt_BP=944nt
GAAGGAGCCGCCATTTGCCACCGCCGAGCGCACGGGCCGAGCCAAGCCTGATCCCGGAGCCGGAGGGGGACTGGGACCGAGAGAACGGCG
ATGGGGGGCGGCCCCGCCGCAGGAGGACCCGGGCGCGTAACCCCGGGGGCCCGGCCCGCTCCAGACCCAGACCCGCGGGGTGCGGCACCC
TGAGCCCCCCTCCCCGCCCCCTGCCCTGGCCATGGCCGCCCACCCCGCCGCCCCCGGGCCGCCAGCCCGCTCGGCCCCGCAAGCACCGGA
GCCCCGGCGGTGGCAGCAGTGAACGGCTGTCGCAGGCCCCGAAGACCCCGGCCCGGCTCGGCTCTCTAGCGCGCGCCCCCTTCCCGGCCT
TGTCCTCTCCCCTCCCCCCGCCGCTAGCGAGCCCCCCTTGCACGCTGCCCCCCGCCCCCGGTGTCCGGACGATGCTCAAGTCTCGGCTCC
GCATGTTTCTGAACGAGCTGAAGCTGCTGGTGCTGACAGGCGGGGGGCGGCCCCGGGCCGAGCCGCAACCCCGGGGGGGCCGGGGAGGCG
GCTGCGGCTGGGCGCCCTTCGCTGGCTGCTCCACCCGGGACGGCGACGGCGACGAGGAGGAGTACTACGGGTCGGAGCCGCGGGCCCGGG
GCCTGGCCGGCGACAAGGAGCCGCGGGCCGGACCCCTGCCGCCGCCCGCGCCGCCGCTGCCGCCCCCGGGCGCGCTGGACGCCCTGTCGC
TCAGCAGTAGCCTGGACAGCGGACTCCGAACCCCTCAGTGCCGGATCTGCTTCCAGGGCCCGGAGCAGGGGGAGCTCTTAAGCCCCTGCC
GCTGCGACGGCTCAGTGCGCTGCACGCATCAGCCCTGCCTCATCCGCTGGATCAGCGAGAGGGGCTCCTGGAGCTGTGAGCTCTGCTACT
TCAAGTACCAGGTCCTGGCGATCAGCACCAAGAACCCACTGCAGTTTATTGCTTTTGCTTCTTTATTCTTCATCCTGGTTTCAATTACAA
CTTTTTGCCTGGAAACACATGAAGCTTTCAATATTGTTAAAAACAAGACAGAACCAGTCATCAATGGCACAAGTGTTGTTCTACAGTATG
AAATTGAAACGGATCCTGCCTTGACGTATGTAGAAGGAGTGTGTGTGGTGTGGTTTACTTTTGAATTTTTAGTCCGTATTGTTTTTTCAC
CCAATAAACTTGAATTCATCAAAAATCTCTTGAATATCATTGACTTTGTGGCCATCCTACCTTTCTACTTAGAGGTGGGACTCAGTGGGC
TGTCATCCAAAGCTGCTAAAGATGTGCTTGGCTTCCTCAGGGTGGTAAGGTTTGTGAGGATCCTGAGAATTTTCAAGCTCACCCGCCATT
TTGTAGGTCTGAGGGTGCTTGGACATACTCTTCGAGCTAGTACTAATGAATTTTTGCTGCTGATAATTTTCCTGGCTCTAGGAGTTTTGA
TATTTGCTACCATGATCTACTATGCCGAGAGAGTGGGAGCTCAACCTAACGACCCTTCAGCTAGTGAGCACACACAGTTCAAAAACATTC
CCATTGGGTTCTGGTGGGCTGTAGTGACCATGACTACCCTGGGTTATGGGGATATGTACCCCCAAACATGGTCAGGCATGCTGGTGGGAG
CCCTGTGTGCTCTGGCTGGAGTGCTGACAATAGCCATGCCAGTGCCTGTCATTGTCAATAATTTTGGAATGTACTACTCCTTGGCAATGG
CAAAGCAGAAACTTCCAAGGAAAAGAAAGAAGCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTACTTTTTGCAAGACAGAATTAAATA
TGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGGATATGAAAAATCCCGAA
GCTTAAACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGGCTCTCTCCAGTAACATCACCCTACAACTCTCCTTGTCCTCTGAGGCGCT
CTCGATCTCCCATCCCATCTATCTTGTAAACCAAACAACCAAACTGCATCAGTCGGCTAAATTGTATTAATTCAAGTGCTGTTTACCCCA

>51716_51716_5_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000540018_length(amino acids)=664AA_BP=307
MPPPSARAEPSLIPEPEGDWDRENGDGGRPRRRRTRARNPGGPARSRPRPAGCGTLSPPPRPLPWPWPPTPPPPGRQPARPRKHRSPGGG
SSERLSQAPKTPARLGSLARAPFPALSSPLPPPLASPPCTLPPAPGVRTMLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWA
PFAGCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGS
VRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPLQFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETD
PALTYVEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLR
VLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCAL
AGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSGYEKSRSLNNI

--------------------------------------------------------------
>51716_51716_6_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000548513_length(transcript)=3262nt_BP=944nt
GAAGGAGCCGCCATTTGCCACCGCCGAGCGCACGGGCCGAGCCAAGCCTGATCCCGGAGCCGGAGGGGGACTGGGACCGAGAGAACGGCG
ATGGGGGGCGGCCCCGCCGCAGGAGGACCCGGGCGCGTAACCCCGGGGGCCCGGCCCGCTCCAGACCCAGACCCGCGGGGTGCGGCACCC
TGAGCCCCCCTCCCCGCCCCCTGCCCTGGCCATGGCCGCCCACCCCGCCGCCCCCGGGCCGCCAGCCCGCTCGGCCCCGCAAGCACCGGA
GCCCCGGCGGTGGCAGCAGTGAACGGCTGTCGCAGGCCCCGAAGACCCCGGCCCGGCTCGGCTCTCTAGCGCGCGCCCCCTTCCCGGCCT
TGTCCTCTCCCCTCCCCCCGCCGCTAGCGAGCCCCCCTTGCACGCTGCCCCCCGCCCCCGGTGTCCGGACGATGCTCAAGTCTCGGCTCC
GCATGTTTCTGAACGAGCTGAAGCTGCTGGTGCTGACAGGCGGGGGGCGGCCCCGGGCCGAGCCGCAACCCCGGGGGGGCCGGGGAGGCG
GCTGCGGCTGGGCGCCCTTCGCTGGCTGCTCCACCCGGGACGGCGACGGCGACGAGGAGGAGTACTACGGGTCGGAGCCGCGGGCCCGGG
GCCTGGCCGGCGACAAGGAGCCGCGGGCCGGACCCCTGCCGCCGCCCGCGCCGCCGCTGCCGCCCCCGGGCGCGCTGGACGCCCTGTCGC
TCAGCAGTAGCCTGGACAGCGGACTCCGAACCCCTCAGTGCCGGATCTGCTTCCAGGGCCCGGAGCAGGGGGAGCTCTTAAGCCCCTGCC
GCTGCGACGGCTCAGTGCGCTGCACGCATCAGCCCTGCCTCATCCGCTGGATCAGCGAGAGGGGCTCCTGGAGCTGTGAGCTCTGCTACT
TCAAGTACCAGGTCCTGGCGATCAGCACCAAGAACCCACTGCAGTTTATTGCTTTTGCTTCTTTATTCTTCATCCTGGTTTCAATTACAA
CTTTTTGCCTGGAAACACATGAAGCTTTCAATATTGTTAAAAACAAGACAGAACCAGTCATCAATGGCACAAGTGTTGTTCTACAGTATG
AAATTGAAACGGATCCTGCCTTGACGTATGTAGAAGGAGTGTGTGTGGTGTGGTTTACTTTTGAATTTTTAGTCCGTATTGTTTTTTCAC
CCAATAAACTTGAATTCATCAAAAATCTCTTGAATATCATTGACTTTGTGGCCATCCTACCTTTCTACTTAGAGGTGGGACTCAGTGGGC
TGTCATCCAAAGCTGCTAAAGATGTGCTTGGCTTCCTCAGGGTGGTAAGGTTTGTGAGGATCCTGAGAATTTTCAAGCTCACCCGCCATT
TTGTAGGTCTGAGGGTGCTTGGACATACTCTTCGAGCTAGTACTAATGAATTTTTGCTGCTGATAATTTTCCTGGCTCTAGGAGTTTTGA
TATTTGCTACCATGATCTACTATGCCGAGAGAGTGGGAGCTCAACCTAACGACCCTTCAGCTAGTGAGCACACACAGTTCAAAAACATTC
CCATTGGGTTCTGGTGGGCTGTAGTGACCATGACTACCCTGGGTTATGGGGATATGTACCCCCAAACATGGTCAGGCATGCTGGTGGGAG
CCCTGTGTGCTCTGGCTGGAGTGCTGACAATAGCCATGCCAGTGCCTGTCATTGTCAATAATTTTGGAATGTACTACTCCTTGGCAATGG
CAAAGCAGAAACTTCCAAGGAAAAGAAAGAAGCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTACTTTTTGCAAGACAGAATTAAATA
TGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTGTTATCAGGTGACGACA
GTACAGGAAGTGAGCCGCCACTATCACCCCCAGAAAGGCTCCCCATCAGACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGAAACAT
GTTTCCTACTGACGACAGGTGATTACACGTGTGCTTCTGATGGAGGGATCAGGAAAGATAACTGCAAAGAGGTTGTCATTACTGGTTACA
CGCAAGCCGAGGCCAGATCTCTTACTTAATGACTTGGGGAAGGCACAAAACATGAGAGAAAGTGTTGTACAGAATTTATCATGGATTATT
GACTGCTGAGAAAGGGACAGTGGAATTTAGCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCA
GGTTGCACTTGGAAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATG
AGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATGTGTGCATGGGTCAACAGTCTTGGCCATTTCTC
ATCAAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGGCCCACATTAG
GTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGTCTTAATTTCCCTTATTTCTACTTCTTTGGTTGAATCTAT
GAACTTGATTGTATAATTTTCTTATAAATTACTGATGTAATCAGCTTGTCAATTATGTTGTGAAATTGTTAGTATTCATTTATCAAAAAT
GACCTATGTTTAGTCACATATTTGTTTAGTTCTGGGAAATTGTTATAGCTTAAATGGAACTCACCAACATTATTCATAGTTTAAGTCTTT
TATCATTATTACCTCAATTATAAATATTACAAAAACATAATTCTGGCAATGAGAGTATTTTTTTATTCAATGATCAAGGAGCAATGTCAG
TATATAGTAGAATATCAATTAAATTATATCCTAAAATGTATATTTTGCATAAAAGAGATATTCTTTAATCAATTACTTTTTTGTGAGTTT
TGTGGCAAATGAAGCTTGTACGTGTCTTTAAAACTGTTGTAGATGAAACTGTATAAGATTTTTACATCTTGCTTAATCAATATTTTCAGA
GTCTATTAGTTCCCCTGGGATTCTGAATATAACATATAGCCTATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCA
TGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACTGAAATGAAGAATAAAAGGCAAATGAGCTGGGGATAAACTTGAATGTTATC

>51716_51716_6_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000548513_length(amino acids)=694AA_BP=307
MPPPSARAEPSLIPEPEGDWDRENGDGGRPRRRRTRARNPGGPARSRPRPAGCGTLSPPPRPLPWPWPPTPPPPGRQPARPRKHRSPGGG
SSERLSQAPKTPARLGSLARAPFPALSSPLPPPLASPPCTLPPAPGVRTMLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWA
PFAGCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGS
VRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPLQFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETD
PALTYVEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLR
VLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCAL
AGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSVLSGDDSTGSE

--------------------------------------------------------------
>51716_51716_7_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000549446_length(transcript)=5201nt_BP=944nt
GAAGGAGCCGCCATTTGCCACCGCCGAGCGCACGGGCCGAGCCAAGCCTGATCCCGGAGCCGGAGGGGGACTGGGACCGAGAGAACGGCG
ATGGGGGGCGGCCCCGCCGCAGGAGGACCCGGGCGCGTAACCCCGGGGGCCCGGCCCGCTCCAGACCCAGACCCGCGGGGTGCGGCACCC
TGAGCCCCCCTCCCCGCCCCCTGCCCTGGCCATGGCCGCCCACCCCGCCGCCCCCGGGCCGCCAGCCCGCTCGGCCCCGCAAGCACCGGA
GCCCCGGCGGTGGCAGCAGTGAACGGCTGTCGCAGGCCCCGAAGACCCCGGCCCGGCTCGGCTCTCTAGCGCGCGCCCCCTTCCCGGCCT
TGTCCTCTCCCCTCCCCCCGCCGCTAGCGAGCCCCCCTTGCACGCTGCCCCCCGCCCCCGGTGTCCGGACGATGCTCAAGTCTCGGCTCC
GCATGTTTCTGAACGAGCTGAAGCTGCTGGTGCTGACAGGCGGGGGGCGGCCCCGGGCCGAGCCGCAACCCCGGGGGGGCCGGGGAGGCG
GCTGCGGCTGGGCGCCCTTCGCTGGCTGCTCCACCCGGGACGGCGACGGCGACGAGGAGGAGTACTACGGGTCGGAGCCGCGGGCCCGGG
GCCTGGCCGGCGACAAGGAGCCGCGGGCCGGACCCCTGCCGCCGCCCGCGCCGCCGCTGCCGCCCCCGGGCGCGCTGGACGCCCTGTCGC
TCAGCAGTAGCCTGGACAGCGGACTCCGAACCCCTCAGTGCCGGATCTGCTTCCAGGGCCCGGAGCAGGGGGAGCTCTTAAGCCCCTGCC
GCTGCGACGGCTCAGTGCGCTGCACGCATCAGCCCTGCCTCATCCGCTGGATCAGCGAGAGGGGCTCCTGGAGCTGTGAGCTCTGCTACT
TCAAGTACCAGGTCCTGGCGATCAGCACCAAGAACCCACTGCAGTTTATTGCTTTTGCTTCTTTATTCTTCATCCTGGTTTCAATTACAA
CTTTTTGCCTGGAAACACATGAAGCTTTCAATATTGTTAAAAACAAGACAGAACCAGTCATCAATGGCACAAGTGTTGTTCTACAGTATG
AAATTGAAACGGATCCTGCCTTGACGTATGTAGAAGGAGTGTGTGTGGTGTGGTTTACTTTTGAATTTTTAGTCCGTATTGTTTTTTCAC
CCAATAAACTTGAATTCATCAAAAATCTCTTGAATATCATTGACTTTGTGGCCATCCTACCTTTCTACTTAGAGGTGGGACTCAGTGGGC
TGTCATCCAAAGCTGCTAAAGATGTGCTTGGCTTCCTCAGGGTGGTAAGGTTTGTGAGGATCCTGAGAATTTTCAAGCTCACCCGCCATT
TTGTAGGTCTGAGGGTGCTTGGACATACTCTTCGAGCTAGTACTAATGAATTTTTGCTGCTGATAATTTTCCTGGCTCTAGGAGTTTTGA
TATTTGCTACCATGATCTACTATGCCGAGAGAGTGGGAGCTCAACCTAACGACCCTTCAGCTAGTGAGCACACACAGTTCAAAAACATTC
CCATTGGGTTCTGGTGGGCTGTAGTGACCATGACTACCCTGGGTTATGGGGATATGTACCCCCAAACATGGTCAGGCATGCTGGTGGGAG
CCCTGTGTGCTCTGGCTGGAGTGCTGACAATAGCCATGCCAGTGCCTGTCATTGTCAATAATTTTGGAATGTACTACTCCTTGGCAATGG
CAAAGCAGAAACTTCCAAGGAAAAGAAAGAAGCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTACTTTTTGCAAGACAGAATTAAATA
TGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTGTTATCAGGTGACGACA
GTACAGGAAGTGAGCCGCCACTATCACCCCCAGAAAGGCTCCCCATCAGACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGAAACAT
GTTTCCTACTGACGACAGGTGATTACACGTGTGCTTCTGATGGAGGGATCAGGAAAGGATATGAAAAATCCCGAAGCTTAAACAACATAG
CGGGCTTGGCAGGCAATGCTCTGAGGCTCTCTCCAGTAACATCACCCTACAACTCTCCTTGTCCTCTGAGGCGCTCTCGATCTCCCATCC
CATCTATCTTGTAAACCAAACAACCAAACTGCATCAGTCGGCTAAATTGTATTAATTCAAGTGCTGTTTACCCCATAATGGAAATAATTA
AATGTAGAGTTACTCCAGGCTCCATTAATACAGTATAAATCTTGCATGATACTACAATTTGAAGTCAGAAATGCCACTTGGGTAGCTAAT
GAATCTTACCCAGGCTTTAAAGATTGTCTAAAGTAGTGCTAAGATCCCTCCTATTAATTGCCCTGATATCCTTTTGCAATAAAATGACAG
ATAGTGTCAGATATTGACCAGTGCACTAATATATAAACATACCTTCAGGGAGATATATTTAAAACAGTGTGCTTCCAAATGCCAACCACT
TCATTGGAACTTTATTTCTTGTGACTGTAAACCATTCTGAAGATGTCTGGGATCCTATCTTGATTGCACACGACATGACTTGTGTCAGCT
CATTTGCATGGACCATCTTGTCTCTATCACCTGAAAGCAATGTTGCAGAGTTCGGGGACTGTGGATAGCTCAGGATATGTGTACTTGCAT
CGAACCATCCTGCTGATATGAAAGCATTGGTCGACTGTTCTGCATGTTGAATTGTGGGGCAGGGAGGGCACTTTTCTCCTTGACATTTTT
TTCTTATTATTTGAAAGAAATATATGTTTTAAATAGTTTAATTTCTTGATTGATTTACTTTTCTTCAAAAATGCTGTATTGGAGTTCTGA
ATGTCTCTGGTTGTTTGCACACAGATAACTGCAAAGAGGTTGTCATTACTGGTTACACGCAAGCCGAGGCCAGATCTCTTACTTAATGAC
TTGGGGAAGGCACAAAACATGAGAGAAAGGTAACTGCCAGCCAGGCTTGCATTGTTTAGCCAGAAATTGCTGCTTGGTTCTAGACTCTTT
AAAAAAAAAAAATACCCAGGGTTTGTCATCATTTTCAGAGGCAGAGTGCCAAATATCACCCAAAGCTCTTGTGTCTTTTTTTTACCCCCT
TATTTTATTTTTATTTATTAATTTTTTGTGCAAACATCAAATGTCACTGGTGTTCACAGAAGGCTTTTTTGACTAGCCTTAAATTCCTGA
GTCAAAAGATTAATCAGATTTTCAGGCAGTGTTTAATCAGGTGCTTTGTCCTGTATGTTGTTCTTGTCTGTCTTAGCTCCCTGTCTTTCC
TGTATATGCCATCTGTCTCCATGAAGCACAGAAATGCCTCTGTAAGATGTTTATGATTTTAATATTTACTCCCTCCAAACCCGACTCCAT
ACCATTTTTTGCTATTTGGAGCAGCCTCTCTGCTTTGTGTATAAATTAATGATGCTCTGTAGACTACCTAAGTTAATCGGCACTGTGAAT
CTTTTTGATAAGCAGGGTTTAAGCAGCAATTTCACCATTGCACTTGGTTGCCTGCTGCAGTGTCAGTTTCTACTACCTAGCAACCAGCAT
TCATTACTACACTCCAACAAAATCCTTAGGGAGTCATATTCAGTCTGAGTGGAAGAAAGTCTATTTATGCATTCCTATGAATTCAACAGC
AATAGCGTGTCTCATGTATTGAGCATGTGAGGGAAGAAAAAGACCGTAATATAAATAGAGGGATAAATAATATCACTAAGGCATTTGGGA
GCCTTGAGACTGCTGATTAATTCCTATTTCTCATGTTTATTTTTTGTTAGGAAGACAATTGTCACTTTTATTATTGGCCACGAAACATGT
ATTACTCTATATCCCCAAGTCCTAGAGCATGACCTGCATGTTGGAGATGTTGTACAGCAATGTATTTATCCAGACATACATATATGATAT
TTAGAGACACAGTGATTCTTTTGATAACACCACACATAGAACATTATAATTACACACAAATTTATGGTAAAAGAATTAATATGCTGTCTG
GTGCTGCTGTTATTGACTACAGTGTTGTACAGAATTTATCATGGATTATTGACTGCTGAGAAAGGGACAGTGGAATTTAGCCATACCAAG
GACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAGGTTGCACTTGGAAGAGATCCTCGCGTCTTCATGAGGCAC
TTAAAGCTTATAAAAGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGTGCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACA
ACTGTAAATACCAACATGTGTGCATGGGTCAACAGTCTTGGCCATTTCTCATCAAAAGAAGCCAAATTCATGATCAACATCTCTGAAGTT
TCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGGCCCACATTAGGTTGTGCTGTGAATTACTTAAGGCAGTGATACTGATGTAG
TATAGTTTTGTCTTAATTTCCCTTATTTCTACTTCTTTGGTTGAATCTATGAACTTGATTGTATAATTTTCTTATAAATTACTGATGTAA
TCAGCTTGTCAATTATGTTGTGAAATTGTTAGTATTCATTTATCAAAAATGACCTATGTTTAGTCACATATTTGTTTAGTTCTGGGAAAT
TGTTATAGCTTAAATGGAACTCACCAACATTATTCATAGTTTAAGTCTTTTATCATTATTACCTCAATTATAAATATTACAAAAACATAA
TTCTGGCAATGAGAGTATTTTTTTATTCAATGATCAAGGAGCAATGTCAGTATATAGTAGAATATCAATTAAATTATATCCTAAAATGTA
TATTTTGCATAAAAGAGATATTCTTTAATCAATTACTTTTTTGTGAGTTTTGTGGCAAATGAAGCTTGTACGTGTCTTTAAAACTGTTGT
AGATGAAACTGTATAAGATTTTTACATCTTGCTTAATCAATATTTTCAGAGTCTATTAGTTCCCCTGGGATTCTGAATATAACATATAGC
CTATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCACAACCTTGATGATAACCAGTGGAAATGTAACTAACT

>51716_51716_7_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000549446_length(amino acids)=719AA_BP=307
MPPPSARAEPSLIPEPEGDWDRENGDGGRPRRRRTRARNPGGPARSRPRPAGCGTLSPPPRPLPWPWPPTPPPPGRQPARPRKHRSPGGG
SSERLSQAPKTPARLGSLARAPFPALSSPLPPPLASPPCTLPPAPGVRTMLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWA
PFAGCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGS
VRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPLQFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETD
PALTYVEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLR
VLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCAL
AGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSVLSGDDSTGSE

--------------------------------------------------------------
>51716_51716_8_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000550433_length(transcript)=3167nt_BP=944nt
GAAGGAGCCGCCATTTGCCACCGCCGAGCGCACGGGCCGAGCCAAGCCTGATCCCGGAGCCGGAGGGGGACTGGGACCGAGAGAACGGCG
ATGGGGGGCGGCCCCGCCGCAGGAGGACCCGGGCGCGTAACCCCGGGGGCCCGGCCCGCTCCAGACCCAGACCCGCGGGGTGCGGCACCC
TGAGCCCCCCTCCCCGCCCCCTGCCCTGGCCATGGCCGCCCACCCCGCCGCCCCCGGGCCGCCAGCCCGCTCGGCCCCGCAAGCACCGGA
GCCCCGGCGGTGGCAGCAGTGAACGGCTGTCGCAGGCCCCGAAGACCCCGGCCCGGCTCGGCTCTCTAGCGCGCGCCCCCTTCCCGGCCT
TGTCCTCTCCCCTCCCCCCGCCGCTAGCGAGCCCCCCTTGCACGCTGCCCCCCGCCCCCGGTGTCCGGACGATGCTCAAGTCTCGGCTCC
GCATGTTTCTGAACGAGCTGAAGCTGCTGGTGCTGACAGGCGGGGGGCGGCCCCGGGCCGAGCCGCAACCCCGGGGGGGCCGGGGAGGCG
GCTGCGGCTGGGCGCCCTTCGCTGGCTGCTCCACCCGGGACGGCGACGGCGACGAGGAGGAGTACTACGGGTCGGAGCCGCGGGCCCGGG
GCCTGGCCGGCGACAAGGAGCCGCGGGCCGGACCCCTGCCGCCGCCCGCGCCGCCGCTGCCGCCCCCGGGCGCGCTGGACGCCCTGTCGC
TCAGCAGTAGCCTGGACAGCGGACTCCGAACCCCTCAGTGCCGGATCTGCTTCCAGGGCCCGGAGCAGGGGGAGCTCTTAAGCCCCTGCC
GCTGCGACGGCTCAGTGCGCTGCACGCATCAGCCCTGCCTCATCCGCTGGATCAGCGAGAGGGGCTCCTGGAGCTGTGAGCTCTGCTACT
TCAAGTACCAGGTCCTGGCGATCAGCACCAAGAACCCACTGCAGTTTATTGCTTTTGCTTCTTTATTCTTCATCCTGGTTTCAATTACAA
CTTTTTGCCTGGAAACACATGAAGCTTTCAATATTGTTAAAAACAAGACAGAACCAGTCATCAATGGCACAAGTGTTGTTCTACAGTATG
AAATTGAAACGGATCCTGCCTTGACGTATGTAGAAGGAGTGTGTGTGGTGTGGTTTACTTTTGAATTTTTAGTCCGTATTGTTTTTTCAC
CCAATAAACTTGAATTCATCAAAAATCTCTTGAATATCATTGACTTTGTGGCCATCCTACCTTTCTACTTAGAGGTGGGACTCAGTGGGC
TGTCATCCAAAGCTGCTAAAGATGTGCTTGGCTTCCTCAGGGTGGTAAGGTTTGTGAGGATCCTGAGAATTTTCAAGCTCACCCGCCATT
TTGTAGGTCTGAGGGTGCTTGGACATACTCTTCGAGCTAGTACTAATGAATTTTTGCTGCTGATAATTTTCCTGGCTCTAGGAGTTTTGA
TATTTGCTACCATGATCTACTATGCCGAGAGAGTGGGAGCTCAACCTAACGACCCTTCAGCTAGTGAGCACACACAGTTCAAAAACATTC
CCATTGGGTTCTGGTGGGCTGTAGTGACCATGACTACCCTGGGTTATGGGGATATGTACCCCCAAACATGGTCAGGCATGCTGGTGGGAG
CCCTGTGTGCTCTGGCTGGAGTGCTGACAATAGCCATGCCAGTGCCTGTCATTGTCAATAATTTTGGAATGTACTACTCCTTGGCAATGG
CAAAGCAGAAACTTCCAAGGAAAAGAAAGAAGCACATCCCTCCTGCTCCTCAGGCAAGCTCACCTACTTTTTGCAAGACAGAATTAAATA
TGGCCTGCAATAGTACACAGAGTGACACATGTCTGGGCAAAGACAATCGACTTCTGGAACATAACAGATCAGTGTTATCAGGTGACGACA
GTACAGGAAGTGAGCCGCCACTATCACCCCCAGAAAGGCTCCCCATCAGACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGAAACAT
GTTTCCTACTGACGACAGGTGATTACACGTGTGCTTCTGATGGAGGGATCAGGAAAGTGTTGTACAGAATTTATCATGGATTATTGACTG
CTGAGAAAGGGACAGTGGAATTTAGCCATACCAAGGACTATACTGGAAACAGACTTCTGCTGCTGAATGTGCCCTGATGTGACCAGGTTG
CACTTGGAAGAGATCCTCGCGTCTTCATGAGGCACTTAAAGCTTATAAAAGAACTGCGGCTGGAACTCATCTGGTGCTCCCCATGAGAGT
GCTCTGCTTGTAGACTGGCCAGTGTCCATGAAACAACTGTAAATACCAACATGTGTGCATGGGTCAACAGTCTTGGCCATTTCTCATCAA
AAGAAGCCAAATTCATGATCAACATCTCTGAAGTTTCAAGTAAGGCCCACACTTCTTTGAATTACTCTTCATGGGCCCACATTAGGTTGT
GCTGTGAATTACTTAAGGCAGTGATACTGATGTAGTATAGTTTTGTCTTAATTTCCCTTATTTCTACTTCTTTGGTTGAATCTATGAACT
TGATTGTATAATTTTCTTATAAATTACTGATGTAATCAGCTTGTCAATTATGTTGTGAAATTGTTAGTATTCATTTATCAAAAATGACCT
ATGTTTAGTCACATATTTGTTTAGTTCTGGGAAATTGTTATAGCTTAAATGGAACTCACCAACATTATTCATAGTTTAAGTCTTTTATCA
TTATTACCTCAATTATAAATATTACAAAAACATAATTCTGGCAATGAGAGTATTTTTTTATTCAATGATCAAGGAGCAATGTCAGTATAT
AGTAGAATATCAATTAAATTATATCCTAAAATGTATATTTTGCATAAAAGAGATATTCTTTAATCAATTACTTTTTTGTGAGTTTTGTGG
CAAATGAAGCTTGTACGTGTCTTTAAAACTGTTGTAGATGAAACTGTATAAGATTTTTACATCTTGCTTAATCAATATTTTCAGAGTCTA
TTAGTTCCCCTGGGATTCTGAATATAACATATAGCCTATTATAAATCCCTGTATCGTGGACCTTTTGTGAACATTTCAAGGCGCATGCAC
AACCTTGATGATAACCAGTGGAAATGTAACTAACTGAAATGAAGAATAAAAGGCAAATGAGCTGGGGATAAACTTGAATGTTATCTGATT

>51716_51716_8_MARCH9-KCNC2_MARCH9_chr12_58150867_ENST00000266643_KCNC2_chr12_75445097_ENST00000550433_length(amino acids)=710AA_BP=307
MPPPSARAEPSLIPEPEGDWDRENGDGGRPRRRRTRARNPGGPARSRPRPAGCGTLSPPPRPLPWPWPPTPPPPGRQPARPRKHRSPGGG
SSERLSQAPKTPARLGSLARAPFPALSSPLPPPLASPPCTLPPAPGVRTMLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWA
PFAGCSTRDGDGDEEEYYGSEPRARGLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGS
VRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNPLQFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETD
PALTYVEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLR
VLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCAL
AGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSVLSGDDSTGSE

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Fusion Gene PPI Analysis for MARCH9-KCNC2


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for MARCH9-KCNC2


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for MARCH9-KCNC2


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource