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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Fusion gene:MFSD2A-LAPTM5 (FusionGDB2 ID:53266)

Fusion Gene Summary for MFSD2A-LAPTM5

check button Fusion gene summary
Fusion gene informationFusion gene name: MFSD2A-LAPTM5
Fusion gene ID: 53266
HgeneTgene
Gene symbol

MFSD2A

LAPTM5

Gene ID

84879

7805

Gene namemajor facilitator superfamily domain containing 2Alysosomal protein transmembrane 5
SynonymsMCPH15|MFSD2|NLS1CLAST6
Cytomap

1p34.2

1p35.2

Type of geneprotein-codingprotein-coding
Descriptionsodium-dependent lysophosphatidylcholine symporter 1major facilitator superfamily domain-containing protein 2Asodium-dependent LPC symporter 1lysosomal-associated transmembrane protein 5CD40-ligand-activated specific transcriptshuman retinoic acid-inducible E3 proteinlysosomal associated multispanning membrane protein 5lysosomal multispanning membrane protein 5lysosomal-associated multitra
Modification date2020031320200313
UniProtAcc

Q8NA29

Q13571

Ensembl transtripts involved in fusion geneENST00000372809, ENST00000372811, 
ENST00000420632, ENST00000480630, 
ENST00000294507, ENST00000476492, 
Fusion gene scores* DoF score7 X 8 X 3=1687 X 4 X 5=140
# samples 810
** MAII scorelog2(8/168*10)=-1.0703893278914
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(10/140*10)=-0.485426827170242
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: MFSD2A [Title/Abstract] AND LAPTM5 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointMFSD2A(40421057)-LAPTM5(31215396), # samples:4
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneMFSD2A

GO:0051977

lysophospholipid transport

24828044


check buttonFusion gene breakpoints across MFSD2A (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across LAPTM5 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4LGGTCGA-CS-6188-01AMFSD2Achr1

40421056

+LAPTM5chr1

31215395

-
ChimerDB4LGGTCGA-CS-6188-01AMFSD2Achr1

40421057

-LAPTM5chr1

31215396

-
ChimerDB4LGGTCGA-CS-6188-01AMFSD2Achr1

40421057

+LAPTM5chr1

31215396

-
ChimerDB4LGGTCGA-CS-6188MFSD2Achr1

40421057

+LAPTM5chr1

31215396

-
ChimerDB4LGGTCGA-CS-6188MFSD2Achr1

40421057

+LAPTM5chr1

31230642

-


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Fusion Gene ORF analysis for MFSD2A-LAPTM5

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-5UTRENST00000372809ENST00000294507MFSD2Achr1

40421057

+LAPTM5chr1

31230642

-
5CDS-5UTRENST00000372809ENST00000476492MFSD2Achr1

40421056

+LAPTM5chr1

31215395

-
5CDS-5UTRENST00000372809ENST00000476492MFSD2Achr1

40421057

+LAPTM5chr1

31215396

-
5CDS-5UTRENST00000372811ENST00000294507MFSD2Achr1

40421057

+LAPTM5chr1

31230642

-
5CDS-5UTRENST00000372811ENST00000476492MFSD2Achr1

40421056

+LAPTM5chr1

31215395

-
5CDS-5UTRENST00000372811ENST00000476492MFSD2Achr1

40421057

+LAPTM5chr1

31215396

-
5CDS-intronENST00000372809ENST00000476492MFSD2Achr1

40421057

+LAPTM5chr1

31230642

-
5CDS-intronENST00000372811ENST00000476492MFSD2Achr1

40421057

+LAPTM5chr1

31230642

-
5UTR-3CDSENST00000420632ENST00000294507MFSD2Achr1

40421056

+LAPTM5chr1

31215395

-
5UTR-3CDSENST00000420632ENST00000294507MFSD2Achr1

40421057

+LAPTM5chr1

31215396

-
5UTR-5UTRENST00000420632ENST00000294507MFSD2Achr1

40421057

+LAPTM5chr1

31230642

-
5UTR-5UTRENST00000420632ENST00000476492MFSD2Achr1

40421056

+LAPTM5chr1

31215395

-
5UTR-5UTRENST00000420632ENST00000476492MFSD2Achr1

40421057

+LAPTM5chr1

31215396

-
5UTR-intronENST00000420632ENST00000476492MFSD2Achr1

40421057

+LAPTM5chr1

31230642

-
In-frameENST00000372809ENST00000294507MFSD2Achr1

40421056

+LAPTM5chr1

31215395

-
In-frameENST00000372809ENST00000294507MFSD2Achr1

40421057

+LAPTM5chr1

31215396

-
In-frameENST00000372811ENST00000294507MFSD2Achr1

40421056

+LAPTM5chr1

31215395

-
In-frameENST00000372811ENST00000294507MFSD2Achr1

40421057

+LAPTM5chr1

31215396

-
intron-3CDSENST00000480630ENST00000294507MFSD2Achr1

40421056

+LAPTM5chr1

31215395

-
intron-3CDSENST00000480630ENST00000294507MFSD2Achr1

40421057

+LAPTM5chr1

31215396

-
intron-5UTRENST00000480630ENST00000294507MFSD2Achr1

40421057

+LAPTM5chr1

31230642

-
intron-5UTRENST00000480630ENST00000476492MFSD2Achr1

40421056

+LAPTM5chr1

31215395

-
intron-5UTRENST00000480630ENST00000476492MFSD2Achr1

40421057

+LAPTM5chr1

31215396

-
intron-intronENST00000480630ENST00000476492MFSD2Achr1

40421057

+LAPTM5chr1

31230642

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000372811MFSD2Achr140421057+ENST00000294507LAPTM5chr131215396-231725631957308
ENST00000372809MFSD2Achr140421057+ENST00000294507LAPTM5chr131215396-229723611937308
ENST00000372811MFSD2Achr140421056+ENST00000294507LAPTM5chr131215395-231725631957308
ENST00000372809MFSD2Achr140421056+ENST00000294507LAPTM5chr131215395-229723611937308

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000372811ENST00000294507MFSD2Achr140421057+LAPTM5chr131215396-0.102230860.89776915
ENST00000372809ENST00000294507MFSD2Achr140421057+LAPTM5chr131215396-0.0977899660.90221
ENST00000372811ENST00000294507MFSD2Achr140421056+LAPTM5chr131215395-0.102230860.89776915
ENST00000372809ENST00000294507MFSD2Achr140421056+LAPTM5chr131215395-0.0977899660.90221

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Fusion Genomic Features for MFSD2A-LAPTM5


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for MFSD2A-LAPTM5


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:40421057/chr1:31215396)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
MFSD2A

Q8NA29

LAPTM5

Q13571

FUNCTION: Sodium-dependent lysophosphatidylcholine (LPC) symporter, which plays an essential role for blood-brain barrier formation and function (PubMed:24828040). Specifically expressed in endothelium of the blood-brain barrier of micro-vessels and transports LPC into the brain (By similarity). Transport of LPC is essential because it constitutes the major mechanism by which docosahexaenoic acid (DHA), an omega-3 fatty acid that is essential for normal brain growth and cognitive function, enters the brain (PubMed:26005868). Transports LPC carrying long-chain fatty acids such LPC oleate and LPC palmitate with a minimum acyl chain length of 14 carbons (By similarity). Does not transport docosahexaenoic acid in unesterified fatty acid (By similarity). Specifically required for blood-brain barrier formation and function, probably by mediating lipid transport (By similarity). Not required for central nervous system vascular morphogenesis (By similarity). Acts as a transporter for tunicamycin, an inhibitor of asparagine-linked glycosylation (PubMed:21677192). In placenta, acts as a receptor for ERVFRD-1/syncytin-2 and is required for trophoblast fusion (PubMed:18988732, PubMed:23177091). {ECO:0000250|UniProtKB:Q9DA75, ECO:0000269|PubMed:18988732, ECO:0000269|PubMed:21677192, ECO:0000269|PubMed:23177091, ECO:0000269|PubMed:24828040, ECO:0000269|PubMed:26005868}.FUNCTION: May have a special functional role during embryogenesis and in adult hematopoietic cells. {ECO:0000269|PubMed:8661146}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneLAPTM5chr1:40421056chr1:31215395ENST0000029450708246_25829263.0Compositional biasNote=Pro-rich
TgeneLAPTM5chr1:40421057chr1:31215396ENST0000029450708246_25829263.0Compositional biasNote=Pro-rich
TgeneLAPTM5chr1:40421056chr1:31215395ENST0000029450708134_15429263.0TransmembraneHelical
TgeneLAPTM5chr1:40421056chr1:31215395ENST0000029450708184_20429263.0TransmembraneHelical
TgeneLAPTM5chr1:40421056chr1:31215395ENST000002945070864_8429263.0TransmembraneHelical
TgeneLAPTM5chr1:40421056chr1:31215395ENST000002945070892_11229263.0TransmembraneHelical
TgeneLAPTM5chr1:40421057chr1:31215396ENST0000029450708134_15429263.0TransmembraneHelical
TgeneLAPTM5chr1:40421057chr1:31215396ENST0000029450708184_20429263.0TransmembraneHelical
TgeneLAPTM5chr1:40421057chr1:31215396ENST000002945070864_8429263.0TransmembraneHelical
TgeneLAPTM5chr1:40421057chr1:31215396ENST000002945070892_11229263.0TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+11435_3831544.0Compositional biasNote=Poly-Lys
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+11435_3831531.0Compositional biasNote=Poly-Lys
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+11435_3831544.0Compositional biasNote=Poly-Lys
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+11435_3831531.0Compositional biasNote=Poly-Lys
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114102_12831544.0Topological domainExtracellular
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114150_16031544.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114182_25631544.0Topological domainExtracellular
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+1141_4631544.0Topological domainExtracellular
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114278_31031544.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114332_34431544.0Topological domainExtracellular
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114366_37031544.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114392_39331544.0Topological domainExtracellular
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114415_43731544.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114459_48031544.0Topological domainExtracellular
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114502_54331544.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+11468_8031544.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114102_12831531.0Topological domainExtracellular
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114150_16031531.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114182_25631531.0Topological domainExtracellular
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+1141_4631531.0Topological domainExtracellular
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114278_31031531.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114332_34431531.0Topological domainExtracellular
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114366_37031531.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114392_39331531.0Topological domainExtracellular
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114415_43731531.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114459_48031531.0Topological domainExtracellular
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114502_54331531.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+11468_8031531.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114102_12831544.0Topological domainExtracellular
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114150_16031544.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114182_25631544.0Topological domainExtracellular
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+1141_4631544.0Topological domainExtracellular
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114278_31031544.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114332_34431544.0Topological domainExtracellular
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114366_37031544.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114392_39331544.0Topological domainExtracellular
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114415_43731544.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114459_48031544.0Topological domainExtracellular
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114502_54331544.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+11468_8031544.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114102_12831531.0Topological domainExtracellular
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114150_16031531.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114182_25631531.0Topological domainExtracellular
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+1141_4631531.0Topological domainExtracellular
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114278_31031531.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114332_34431531.0Topological domainExtracellular
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114366_37031531.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114392_39331531.0Topological domainExtracellular
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114415_43731531.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114459_48031531.0Topological domainExtracellular
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114502_54331531.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+11468_8031531.0Topological domainCytoplasmic
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114129_14931544.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114161_18131544.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114257_27731544.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114311_33131544.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114345_36531544.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114371_39131544.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114394_41431544.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114438_45831544.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+11447_6731544.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+114481_50131544.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372809+11481_10131544.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114129_14931531.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114161_18131531.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114257_27731531.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114311_33131531.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114345_36531531.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114371_39131531.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114394_41431531.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114438_45831531.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+11447_6731531.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+114481_50131531.0TransmembraneHelical
HgeneMFSD2Achr1:40421056chr1:31215395ENST00000372811+11481_10131531.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114129_14931544.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114161_18131544.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114257_27731544.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114311_33131544.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114345_36531544.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114371_39131544.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114394_41431544.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114438_45831544.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+11447_6731544.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+114481_50131544.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372809+11481_10131544.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114129_14931531.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114161_18131531.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114257_27731531.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114311_33131531.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114345_36531531.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114371_39131531.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114394_41431531.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114438_45831531.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+11447_6731531.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+114481_50131531.0TransmembraneHelical
HgeneMFSD2Achr1:40421057chr1:31215396ENST00000372811+11481_10131531.0TransmembraneHelical
TgeneLAPTM5chr1:40421056chr1:31215395ENST000002945070819_3929263.0TransmembraneHelical
TgeneLAPTM5chr1:40421057chr1:31215396ENST000002945070819_3929263.0TransmembraneHelical


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Fusion Gene Sequence for MFSD2A-LAPTM5


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>53266_53266_1_MFSD2A-LAPTM5_MFSD2A_chr1_40421056_ENST00000372809_LAPTM5_chr1_31215395_ENST00000294507_length(transcript)=2297nt_BP=236nt
GCGTTCCTCGTCTGCCAGCCGGCTTGGCTAGCGCGCGGCGGCCGTGGCTAAGGCTGCTACGAAGCGAGCTTGGGAGGAGCAGCGGCCTGC
GGGGCAGAGGAGCATCCCGTCTACCAGGTCCCAAGCGGCGTGGCCCGCGGGTCATGGCCAAAGGAGAAGGCGCCGAGAGCGGCTCCGCGG
CGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGATCATGAGCGTCTTGTTGTTCATCGAGCACTCAG
TAGAGGTGGCCCATGGCAAGGCGTCCTGCAAGCTCTCCCAGATGGGCTACCTCAGGATCGCTGACCTGATCTCCAGCTTCCTGCTCATCA
CCATGCTCTTCATCATCAGCCTGAGCCTACTGATCGGCGTAGTCAAGAACCGGGAGAAGTACCTGCTGCCCTTCCTGTCCCTGCAAATCA
TGGACTATCTCCTGTGCCTGCTCACCCTGCTGGGCTCCTACATTGAGCTGCCCGCCTACCTCAAGTTGGCCTCCCGGAGCCGTGCTAGCT
CCTCCAAGTTCCCCCTGATGACGCTGCAGCTGCTGGACTTCTGCCTGAGCATCCTGACCCTCTGCAGCTCCTACATGGAAGTGCCCACCT
ATCTCAACTTCAAGTCCATGAACCACATGAATTACCTCCCCAGCCAGGAGGATATGCCTCATAACCAGTTCATCAAGATGATGATCATCT
TTTCCATCGCCTTCATCACTGTCCTTATCTTCAAGGTCTACATGTTCAAGTGCGTGTGGCGGTGCTACAGATTGATCAAGTGCATGAACT
CGGTGGAGGAGAAGAGAAACTCCAAGATGCTCCAGAAGGTGGTCCTGCCGTCCTACGAGGAAGCCCTGTCTTTGCCATCGAAGACCCCAG
AGGGGGGCCCAGCACCACCCCCATACTCAGAGGTGTGACCCTCGCCAGGCCCCAGCCCCAGTGCTGGGAGGGGTGGAGCTGCCTCATAAT
CTGCTTTTTTGCTTTGGTGGCCCCTGTGGCCTGGGTGGGCCCTCCCGCCCCTCCCTGGCAGGACAATCTGCTTGTGTCTCCCTCGCTGGC
CTGCTCCTCCTGCAGGGCCTGTGAGCTGCTCACAACTGGGTCAACGCTTTAGGCTGAGTCACTCCTCGGGTCTCTCCATAATTCAGCCCA
ACAATGCTTGGTTTATTTCAATCAGCTCTGACACTTGTTTAGACGATTGGCCATTCTAAAGTTGGTGAGTTTGTCAAGCAACTATCGACT
TGATCAGTTCAGCCAAGCAACTGACAAATCAAAAACCCACTTGTCAGTTCAGTAAAATAATTTGGTCAAACAACAGTCTATTGCATTGAT
TTATAAATAGTTGTCAGTTCACATAGCAATTTAATCAAGTAATCATTAATTAGTTACCCCCTATATATAAATATATGTAATCAATTTCTT
CAAATAGCTTGCTTACATGATAATCAATTAGCCAACCATGAGTCATTTAGAATAGTGATAAATAGAATACACAGAATAGTGATGAAATTC
AATTTAAAAAATCACGTTAGCCTCCAAACCATTTAATTCAAATGAACCCATCAACTGGATGCCAACTCTGGCGAATGTAGGACCTCTGAG
TGGCTGTATAATTGTTAATTCAAATGAAATTCATTTAAACAGTTGACAAACTGTCATTCAACAATTAGCTCCAGGAAATAACAGTTATTT
CATCATAAAACAGTCCCTTCAAACACACAATTGTTCTGCTGAAGAGTTGTCATCAACAATCCAATGCTCACCTATTCAGTTGCTCTGTGG
TCAGTGTGGCTGCATAACAGTGGATTCCATGAAAGGAGTCATTTTAGTGATGAGCTGCCAGTCCATTCCCAGGCCAGGCTGTCGCTGGCC
ATCCATTCAGTCGATTCAGTCATAGGCGAATCTGTTCTGCCCGAGGCTTGTGGTCAAGCAAAAATTCAGCCCTGAAATCAGGCACATCTG
TTCGTTGGACTAAACCCACAGGTTAGTTCAGTCAAAGCAGGCAACCCCCTTGTGGGCACTGACCCTGCCACTGGGGTCATGGCGGTTGTG
GCAGCTGGGGAGGTTTGGCCCCAACAGCCCTCCTGTGCCTGCTTCCCTGTGTGTCGGGGTCCTCCAGGGAGCTGACCCAGAGGTGGAGGC
CACGGAGGCAGGGTCTCTGGGGACTGTCGGGGGGTACAGAGGGAGAAGGCTCTGCAAGAGCTCCCTGGCAATACCCCCTTGTGTAATTGC

>53266_53266_1_MFSD2A-LAPTM5_MFSD2A_chr1_40421056_ENST00000372809_LAPTM5_chr1_31215395_ENST00000294507_length(amino acids)=308AA_BP=75
MPAGLASARRPWLRLLRSELGRSSGLRGRGASRLPGPKRRGPRVMAKGEGAESGSAAGLLPTSILQSTERPAQVKIMSVLLFIEHSVEVA
HGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLGSYIELPAYLKLASRSRASSSKF
PLMTLQLLDFCLSILTLCSSYMEVPTYLNFKSMNHMNYLPSQEDMPHNQFIKMMIIFSIAFITVLIFKVYMFKCVWRCYRLIKCMNSVEE

--------------------------------------------------------------
>53266_53266_2_MFSD2A-LAPTM5_MFSD2A_chr1_40421056_ENST00000372811_LAPTM5_chr1_31215395_ENST00000294507_length(transcript)=2317nt_BP=256nt
GAGGGGGCGTGCAGCAGAGTGCGTTCCTCGTCTGCCAGCCGGCTTGGCTAGCGCGCGGCGGCCGTGGCTAAGGCTGCTACGAAGCGAGCT
TGGGAGGAGCAGCGGCCTGCGGGGCAGAGGAGCATCCCGTCTACCAGGTCCCAAGCGGCGTGGCCCGCGGGTCATGGCCAAAGGAGAAGG
CGCCGAGAGCGGCTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGATCATGAGCGTCTT
GTTGTTCATCGAGCACTCAGTAGAGGTGGCCCATGGCAAGGCGTCCTGCAAGCTCTCCCAGATGGGCTACCTCAGGATCGCTGACCTGAT
CTCCAGCTTCCTGCTCATCACCATGCTCTTCATCATCAGCCTGAGCCTACTGATCGGCGTAGTCAAGAACCGGGAGAAGTACCTGCTGCC
CTTCCTGTCCCTGCAAATCATGGACTATCTCCTGTGCCTGCTCACCCTGCTGGGCTCCTACATTGAGCTGCCCGCCTACCTCAAGTTGGC
CTCCCGGAGCCGTGCTAGCTCCTCCAAGTTCCCCCTGATGACGCTGCAGCTGCTGGACTTCTGCCTGAGCATCCTGACCCTCTGCAGCTC
CTACATGGAAGTGCCCACCTATCTCAACTTCAAGTCCATGAACCACATGAATTACCTCCCCAGCCAGGAGGATATGCCTCATAACCAGTT
CATCAAGATGATGATCATCTTTTCCATCGCCTTCATCACTGTCCTTATCTTCAAGGTCTACATGTTCAAGTGCGTGTGGCGGTGCTACAG
ATTGATCAAGTGCATGAACTCGGTGGAGGAGAAGAGAAACTCCAAGATGCTCCAGAAGGTGGTCCTGCCGTCCTACGAGGAAGCCCTGTC
TTTGCCATCGAAGACCCCAGAGGGGGGCCCAGCACCACCCCCATACTCAGAGGTGTGACCCTCGCCAGGCCCCAGCCCCAGTGCTGGGAG
GGGTGGAGCTGCCTCATAATCTGCTTTTTTGCTTTGGTGGCCCCTGTGGCCTGGGTGGGCCCTCCCGCCCCTCCCTGGCAGGACAATCTG
CTTGTGTCTCCCTCGCTGGCCTGCTCCTCCTGCAGGGCCTGTGAGCTGCTCACAACTGGGTCAACGCTTTAGGCTGAGTCACTCCTCGGG
TCTCTCCATAATTCAGCCCAACAATGCTTGGTTTATTTCAATCAGCTCTGACACTTGTTTAGACGATTGGCCATTCTAAAGTTGGTGAGT
TTGTCAAGCAACTATCGACTTGATCAGTTCAGCCAAGCAACTGACAAATCAAAAACCCACTTGTCAGTTCAGTAAAATAATTTGGTCAAA
CAACAGTCTATTGCATTGATTTATAAATAGTTGTCAGTTCACATAGCAATTTAATCAAGTAATCATTAATTAGTTACCCCCTATATATAA
ATATATGTAATCAATTTCTTCAAATAGCTTGCTTACATGATAATCAATTAGCCAACCATGAGTCATTTAGAATAGTGATAAATAGAATAC
ACAGAATAGTGATGAAATTCAATTTAAAAAATCACGTTAGCCTCCAAACCATTTAATTCAAATGAACCCATCAACTGGATGCCAACTCTG
GCGAATGTAGGACCTCTGAGTGGCTGTATAATTGTTAATTCAAATGAAATTCATTTAAACAGTTGACAAACTGTCATTCAACAATTAGCT
CCAGGAAATAACAGTTATTTCATCATAAAACAGTCCCTTCAAACACACAATTGTTCTGCTGAAGAGTTGTCATCAACAATCCAATGCTCA
CCTATTCAGTTGCTCTGTGGTCAGTGTGGCTGCATAACAGTGGATTCCATGAAAGGAGTCATTTTAGTGATGAGCTGCCAGTCCATTCCC
AGGCCAGGCTGTCGCTGGCCATCCATTCAGTCGATTCAGTCATAGGCGAATCTGTTCTGCCCGAGGCTTGTGGTCAAGCAAAAATTCAGC
CCTGAAATCAGGCACATCTGTTCGTTGGACTAAACCCACAGGTTAGTTCAGTCAAAGCAGGCAACCCCCTTGTGGGCACTGACCCTGCCA
CTGGGGTCATGGCGGTTGTGGCAGCTGGGGAGGTTTGGCCCCAACAGCCCTCCTGTGCCTGCTTCCCTGTGTGTCGGGGTCCTCCAGGGA
GCTGACCCAGAGGTGGAGGCCACGGAGGCAGGGTCTCTGGGGACTGTCGGGGGGTACAGAGGGAGAAGGCTCTGCAAGAGCTCCCTGGCA

>53266_53266_2_MFSD2A-LAPTM5_MFSD2A_chr1_40421056_ENST00000372811_LAPTM5_chr1_31215395_ENST00000294507_length(amino acids)=308AA_BP=75
MPAGLASARRPWLRLLRSELGRSSGLRGRGASRLPGPKRRGPRVMAKGEGAESGSAAGLLPTSILQSTERPAQVKIMSVLLFIEHSVEVA
HGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLGSYIELPAYLKLASRSRASSSKF
PLMTLQLLDFCLSILTLCSSYMEVPTYLNFKSMNHMNYLPSQEDMPHNQFIKMMIIFSIAFITVLIFKVYMFKCVWRCYRLIKCMNSVEE

--------------------------------------------------------------
>53266_53266_3_MFSD2A-LAPTM5_MFSD2A_chr1_40421057_ENST00000372809_LAPTM5_chr1_31215396_ENST00000294507_length(transcript)=2297nt_BP=236nt
GCGTTCCTCGTCTGCCAGCCGGCTTGGCTAGCGCGCGGCGGCCGTGGCTAAGGCTGCTACGAAGCGAGCTTGGGAGGAGCAGCGGCCTGC
GGGGCAGAGGAGCATCCCGTCTACCAGGTCCCAAGCGGCGTGGCCCGCGGGTCATGGCCAAAGGAGAAGGCGCCGAGAGCGGCTCCGCGG
CGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGATCATGAGCGTCTTGTTGTTCATCGAGCACTCAG
TAGAGGTGGCCCATGGCAAGGCGTCCTGCAAGCTCTCCCAGATGGGCTACCTCAGGATCGCTGACCTGATCTCCAGCTTCCTGCTCATCA
CCATGCTCTTCATCATCAGCCTGAGCCTACTGATCGGCGTAGTCAAGAACCGGGAGAAGTACCTGCTGCCCTTCCTGTCCCTGCAAATCA
TGGACTATCTCCTGTGCCTGCTCACCCTGCTGGGCTCCTACATTGAGCTGCCCGCCTACCTCAAGTTGGCCTCCCGGAGCCGTGCTAGCT
CCTCCAAGTTCCCCCTGATGACGCTGCAGCTGCTGGACTTCTGCCTGAGCATCCTGACCCTCTGCAGCTCCTACATGGAAGTGCCCACCT
ATCTCAACTTCAAGTCCATGAACCACATGAATTACCTCCCCAGCCAGGAGGATATGCCTCATAACCAGTTCATCAAGATGATGATCATCT
TTTCCATCGCCTTCATCACTGTCCTTATCTTCAAGGTCTACATGTTCAAGTGCGTGTGGCGGTGCTACAGATTGATCAAGTGCATGAACT
CGGTGGAGGAGAAGAGAAACTCCAAGATGCTCCAGAAGGTGGTCCTGCCGTCCTACGAGGAAGCCCTGTCTTTGCCATCGAAGACCCCAG
AGGGGGGCCCAGCACCACCCCCATACTCAGAGGTGTGACCCTCGCCAGGCCCCAGCCCCAGTGCTGGGAGGGGTGGAGCTGCCTCATAAT
CTGCTTTTTTGCTTTGGTGGCCCCTGTGGCCTGGGTGGGCCCTCCCGCCCCTCCCTGGCAGGACAATCTGCTTGTGTCTCCCTCGCTGGC
CTGCTCCTCCTGCAGGGCCTGTGAGCTGCTCACAACTGGGTCAACGCTTTAGGCTGAGTCACTCCTCGGGTCTCTCCATAATTCAGCCCA
ACAATGCTTGGTTTATTTCAATCAGCTCTGACACTTGTTTAGACGATTGGCCATTCTAAAGTTGGTGAGTTTGTCAAGCAACTATCGACT
TGATCAGTTCAGCCAAGCAACTGACAAATCAAAAACCCACTTGTCAGTTCAGTAAAATAATTTGGTCAAACAACAGTCTATTGCATTGAT
TTATAAATAGTTGTCAGTTCACATAGCAATTTAATCAAGTAATCATTAATTAGTTACCCCCTATATATAAATATATGTAATCAATTTCTT
CAAATAGCTTGCTTACATGATAATCAATTAGCCAACCATGAGTCATTTAGAATAGTGATAAATAGAATACACAGAATAGTGATGAAATTC
AATTTAAAAAATCACGTTAGCCTCCAAACCATTTAATTCAAATGAACCCATCAACTGGATGCCAACTCTGGCGAATGTAGGACCTCTGAG
TGGCTGTATAATTGTTAATTCAAATGAAATTCATTTAAACAGTTGACAAACTGTCATTCAACAATTAGCTCCAGGAAATAACAGTTATTT
CATCATAAAACAGTCCCTTCAAACACACAATTGTTCTGCTGAAGAGTTGTCATCAACAATCCAATGCTCACCTATTCAGTTGCTCTGTGG
TCAGTGTGGCTGCATAACAGTGGATTCCATGAAAGGAGTCATTTTAGTGATGAGCTGCCAGTCCATTCCCAGGCCAGGCTGTCGCTGGCC
ATCCATTCAGTCGATTCAGTCATAGGCGAATCTGTTCTGCCCGAGGCTTGTGGTCAAGCAAAAATTCAGCCCTGAAATCAGGCACATCTG
TTCGTTGGACTAAACCCACAGGTTAGTTCAGTCAAAGCAGGCAACCCCCTTGTGGGCACTGACCCTGCCACTGGGGTCATGGCGGTTGTG
GCAGCTGGGGAGGTTTGGCCCCAACAGCCCTCCTGTGCCTGCTTCCCTGTGTGTCGGGGTCCTCCAGGGAGCTGACCCAGAGGTGGAGGC
CACGGAGGCAGGGTCTCTGGGGACTGTCGGGGGGTACAGAGGGAGAAGGCTCTGCAAGAGCTCCCTGGCAATACCCCCTTGTGTAATTGC

>53266_53266_3_MFSD2A-LAPTM5_MFSD2A_chr1_40421057_ENST00000372809_LAPTM5_chr1_31215396_ENST00000294507_length(amino acids)=308AA_BP=75
MPAGLASARRPWLRLLRSELGRSSGLRGRGASRLPGPKRRGPRVMAKGEGAESGSAAGLLPTSILQSTERPAQVKIMSVLLFIEHSVEVA
HGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLGSYIELPAYLKLASRSRASSSKF
PLMTLQLLDFCLSILTLCSSYMEVPTYLNFKSMNHMNYLPSQEDMPHNQFIKMMIIFSIAFITVLIFKVYMFKCVWRCYRLIKCMNSVEE

--------------------------------------------------------------
>53266_53266_4_MFSD2A-LAPTM5_MFSD2A_chr1_40421057_ENST00000372811_LAPTM5_chr1_31215396_ENST00000294507_length(transcript)=2317nt_BP=256nt
GAGGGGGCGTGCAGCAGAGTGCGTTCCTCGTCTGCCAGCCGGCTTGGCTAGCGCGCGGCGGCCGTGGCTAAGGCTGCTACGAAGCGAGCT
TGGGAGGAGCAGCGGCCTGCGGGGCAGAGGAGCATCCCGTCTACCAGGTCCCAAGCGGCGTGGCCCGCGGGTCATGGCCAAAGGAGAAGG
CGCCGAGAGCGGCTCCGCGGCGGGGCTGCTACCCACCAGCATCCTCCAAAGCACTGAACGCCCGGCCCAGGTGAAGATCATGAGCGTCTT
GTTGTTCATCGAGCACTCAGTAGAGGTGGCCCATGGCAAGGCGTCCTGCAAGCTCTCCCAGATGGGCTACCTCAGGATCGCTGACCTGAT
CTCCAGCTTCCTGCTCATCACCATGCTCTTCATCATCAGCCTGAGCCTACTGATCGGCGTAGTCAAGAACCGGGAGAAGTACCTGCTGCC
CTTCCTGTCCCTGCAAATCATGGACTATCTCCTGTGCCTGCTCACCCTGCTGGGCTCCTACATTGAGCTGCCCGCCTACCTCAAGTTGGC
CTCCCGGAGCCGTGCTAGCTCCTCCAAGTTCCCCCTGATGACGCTGCAGCTGCTGGACTTCTGCCTGAGCATCCTGACCCTCTGCAGCTC
CTACATGGAAGTGCCCACCTATCTCAACTTCAAGTCCATGAACCACATGAATTACCTCCCCAGCCAGGAGGATATGCCTCATAACCAGTT
CATCAAGATGATGATCATCTTTTCCATCGCCTTCATCACTGTCCTTATCTTCAAGGTCTACATGTTCAAGTGCGTGTGGCGGTGCTACAG
ATTGATCAAGTGCATGAACTCGGTGGAGGAGAAGAGAAACTCCAAGATGCTCCAGAAGGTGGTCCTGCCGTCCTACGAGGAAGCCCTGTC
TTTGCCATCGAAGACCCCAGAGGGGGGCCCAGCACCACCCCCATACTCAGAGGTGTGACCCTCGCCAGGCCCCAGCCCCAGTGCTGGGAG
GGGTGGAGCTGCCTCATAATCTGCTTTTTTGCTTTGGTGGCCCCTGTGGCCTGGGTGGGCCCTCCCGCCCCTCCCTGGCAGGACAATCTG
CTTGTGTCTCCCTCGCTGGCCTGCTCCTCCTGCAGGGCCTGTGAGCTGCTCACAACTGGGTCAACGCTTTAGGCTGAGTCACTCCTCGGG
TCTCTCCATAATTCAGCCCAACAATGCTTGGTTTATTTCAATCAGCTCTGACACTTGTTTAGACGATTGGCCATTCTAAAGTTGGTGAGT
TTGTCAAGCAACTATCGACTTGATCAGTTCAGCCAAGCAACTGACAAATCAAAAACCCACTTGTCAGTTCAGTAAAATAATTTGGTCAAA
CAACAGTCTATTGCATTGATTTATAAATAGTTGTCAGTTCACATAGCAATTTAATCAAGTAATCATTAATTAGTTACCCCCTATATATAA
ATATATGTAATCAATTTCTTCAAATAGCTTGCTTACATGATAATCAATTAGCCAACCATGAGTCATTTAGAATAGTGATAAATAGAATAC
ACAGAATAGTGATGAAATTCAATTTAAAAAATCACGTTAGCCTCCAAACCATTTAATTCAAATGAACCCATCAACTGGATGCCAACTCTG
GCGAATGTAGGACCTCTGAGTGGCTGTATAATTGTTAATTCAAATGAAATTCATTTAAACAGTTGACAAACTGTCATTCAACAATTAGCT
CCAGGAAATAACAGTTATTTCATCATAAAACAGTCCCTTCAAACACACAATTGTTCTGCTGAAGAGTTGTCATCAACAATCCAATGCTCA
CCTATTCAGTTGCTCTGTGGTCAGTGTGGCTGCATAACAGTGGATTCCATGAAAGGAGTCATTTTAGTGATGAGCTGCCAGTCCATTCCC
AGGCCAGGCTGTCGCTGGCCATCCATTCAGTCGATTCAGTCATAGGCGAATCTGTTCTGCCCGAGGCTTGTGGTCAAGCAAAAATTCAGC
CCTGAAATCAGGCACATCTGTTCGTTGGACTAAACCCACAGGTTAGTTCAGTCAAAGCAGGCAACCCCCTTGTGGGCACTGACCCTGCCA
CTGGGGTCATGGCGGTTGTGGCAGCTGGGGAGGTTTGGCCCCAACAGCCCTCCTGTGCCTGCTTCCCTGTGTGTCGGGGTCCTCCAGGGA
GCTGACCCAGAGGTGGAGGCCACGGAGGCAGGGTCTCTGGGGACTGTCGGGGGGTACAGAGGGAGAAGGCTCTGCAAGAGCTCCCTGGCA

>53266_53266_4_MFSD2A-LAPTM5_MFSD2A_chr1_40421057_ENST00000372811_LAPTM5_chr1_31215396_ENST00000294507_length(amino acids)=308AA_BP=75
MPAGLASARRPWLRLLRSELGRSSGLRGRGASRLPGPKRRGPRVMAKGEGAESGSAAGLLPTSILQSTERPAQVKIMSVLLFIEHSVEVA
HGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLGSYIELPAYLKLASRSRASSSKF
PLMTLQLLDFCLSILTLCSSYMEVPTYLNFKSMNHMNYLPSQEDMPHNQFIKMMIIFSIAFITVLIFKVYMFKCVWRCYRLIKCMNSVEE

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Fusion Gene PPI Analysis for MFSD2A-LAPTM5


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for MFSD2A-LAPTM5


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for MFSD2A-LAPTM5


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource