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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:NAA60-IST1 (FusionGDB2 ID:57015)

Fusion Gene Summary for NAA60-IST1

check button Fusion gene summary
Fusion gene informationFusion gene name: NAA60-IST1
Fusion gene ID: 57015
HgeneTgene
Gene symbol

NAA60

IST1

Gene ID

79903

9798

Gene nameN-alpha-acetyltransferase 60, NatF catalytic subunitIST1 factor associated with ESCRT-III
SynonymsHAT4|NAT15|NatF|hNaa60CHMP8|OLC1
Cytomap

16p13.3

16q22.2

Type of geneprotein-codingprotein-coding
DescriptionN-alpha-acetyltransferase 60N-acetyltransferase 15 (GCN5-related, putative)N-alpha-acetyltransferase Fepididymis secretory sperm binding proteinhistone acetyltransferase type B protein 4IST1 homologIST1, ESCRT-III associated factorIST1, endosomal sorting complex required for transport-III componentincreased sodium tolerance 1 homologoverexpressed in lung cancer 1putative MAPK-activating protein PM28
Modification date2020031320200313
UniProtAcc

Q9H7X0

P53990

Ensembl transtripts involved in fusion geneENST00000424546, ENST00000407558, 
ENST00000573580, ENST00000608722, 
ENST00000360862, ENST00000414063, 
ENST00000421765, ENST00000570551, 
ENST00000570819, ENST00000572584, 
ENST00000572942, ENST00000575076, 
ENST00000576906, ENST00000576916, 
ENST00000577013, ENST00000608993, 
ENST00000610180, 
ENST00000329908, 
ENST00000378798, ENST00000378799, 
ENST00000535424, ENST00000541571, 
ENST00000544564, ENST00000538565, 
ENST00000538850, ENST00000606369, 
Fusion gene scores* DoF score10 X 8 X 7=5608 X 7 X 4=224
# samples 1210
** MAII scorelog2(12/560*10)=-2.22239242133645
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(10/224*10)=-1.16349873228288
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: NAA60 [Title/Abstract] AND IST1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointNAA60(3497620)-IST1(71949529), # samples:2
NAA60(3493827)-IST1(71949529), # samples:2
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneNAA60

GO:0006334

nucleosome assembly

21981917

HgeneNAA60

GO:0006474

N-terminal protein amino acid acetylation

25732826|27320834|27550639

HgeneNAA60

GO:0017196

N-terminal peptidyl-methionine acetylation

21750686

HgeneNAA60

GO:0043967

histone H4 acetylation

21981917

TgeneIST1

GO:0009838

abscission

19129479|19129480

TgeneIST1

GO:0019076

viral release from host cell

19129479

TgeneIST1

GO:0045862

positive regulation of proteolysis

20849418

TgeneIST1

GO:0046745

viral capsid secondary envelopment

19129479


check buttonFusion gene breakpoints across NAA60 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across IST1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4PRADTCGA-EJ-5530-01ANAA60chr16

3497620

+IST1chr16

71949529

+
ChimerDB4PRADTCGA-EJ-5530NAA60chr16

3493827

+IST1chr16

71949529

+
ChimerDB4PRADTCGA-EJ-5530NAA60chr16

3497620

+IST1chr16

71949529

+


Top

Fusion Gene ORF analysis for NAA60-IST1

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-5UTRENST00000424546ENST00000329908NAA60chr16

3493827

+IST1chr16

71949529

+
5CDS-5UTRENST00000424546ENST00000378798NAA60chr16

3493827

+IST1chr16

71949529

+
5CDS-5UTRENST00000424546ENST00000378799NAA60chr16

3493827

+IST1chr16

71949529

+
5CDS-5UTRENST00000424546ENST00000535424NAA60chr16

3493827

+IST1chr16

71949529

+
5CDS-5UTRENST00000424546ENST00000541571NAA60chr16

3493827

+IST1chr16

71949529

+
5CDS-5UTRENST00000424546ENST00000544564NAA60chr16

3493827

+IST1chr16

71949529

+
5CDS-intronENST00000424546ENST00000538565NAA60chr16

3493827

+IST1chr16

71949529

+
5CDS-intronENST00000424546ENST00000538850NAA60chr16

3493827

+IST1chr16

71949529

+
5CDS-intronENST00000424546ENST00000606369NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000407558ENST00000329908NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000407558ENST00000378798NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000407558ENST00000378799NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000407558ENST00000535424NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000407558ENST00000541571NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000407558ENST00000544564NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000573580ENST00000329908NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000573580ENST00000378798NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000573580ENST00000378799NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000573580ENST00000535424NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000573580ENST00000541571NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000573580ENST00000544564NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000608722ENST00000329908NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000608722ENST00000378798NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000608722ENST00000378799NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000608722ENST00000535424NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000608722ENST00000541571NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-5UTRENST00000608722ENST00000544564NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-intronENST00000407558ENST00000538565NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-intronENST00000407558ENST00000538850NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-intronENST00000407558ENST00000606369NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-intronENST00000573580ENST00000538565NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-intronENST00000573580ENST00000538850NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-intronENST00000573580ENST00000606369NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-intronENST00000608722ENST00000538565NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-intronENST00000608722ENST00000538850NAA60chr16

3493827

+IST1chr16

71949529

+
5UTR-intronENST00000608722ENST00000606369NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000360862ENST00000329908NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000360862ENST00000329908NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000360862ENST00000378798NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000360862ENST00000378798NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000360862ENST00000378799NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000360862ENST00000378799NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000360862ENST00000535424NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000360862ENST00000535424NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000360862ENST00000541571NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000360862ENST00000541571NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000360862ENST00000544564NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000360862ENST00000544564NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000407558ENST00000329908NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000407558ENST00000378798NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000407558ENST00000378799NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000407558ENST00000535424NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000407558ENST00000541571NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000407558ENST00000544564NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000414063ENST00000329908NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000414063ENST00000329908NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000414063ENST00000378798NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000414063ENST00000378798NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000414063ENST00000378799NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000414063ENST00000378799NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000414063ENST00000535424NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000414063ENST00000535424NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000414063ENST00000541571NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000414063ENST00000541571NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000414063ENST00000544564NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000414063ENST00000544564NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000421765ENST00000329908NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000421765ENST00000329908NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000421765ENST00000378798NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000421765ENST00000378798NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000421765ENST00000378799NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000421765ENST00000378799NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000421765ENST00000535424NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000421765ENST00000535424NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000421765ENST00000541571NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000421765ENST00000541571NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000421765ENST00000544564NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000421765ENST00000544564NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000424546ENST00000329908NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000424546ENST00000378798NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000424546ENST00000378799NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000424546ENST00000535424NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000424546ENST00000541571NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000424546ENST00000544564NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000570551ENST00000329908NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000570551ENST00000329908NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000570551ENST00000378798NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000570551ENST00000378798NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000570551ENST00000378799NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000570551ENST00000378799NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000570551ENST00000535424NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000570551ENST00000535424NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000570551ENST00000541571NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000570551ENST00000541571NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000570551ENST00000544564NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000570551ENST00000544564NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000570819ENST00000329908NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000570819ENST00000329908NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000570819ENST00000378798NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000570819ENST00000378798NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000570819ENST00000378799NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000570819ENST00000378799NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000570819ENST00000535424NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000570819ENST00000535424NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000570819ENST00000541571NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000570819ENST00000541571NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000570819ENST00000544564NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000570819ENST00000544564NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000572584ENST00000329908NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000572584ENST00000329908NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000572584ENST00000378798NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000572584ENST00000378798NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000572584ENST00000378799NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000572584ENST00000378799NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000572584ENST00000535424NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000572584ENST00000535424NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000572584ENST00000541571NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000572584ENST00000541571NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000572584ENST00000544564NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000572584ENST00000544564NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000572942ENST00000329908NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000572942ENST00000329908NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000572942ENST00000378798NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000572942ENST00000378798NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000572942ENST00000378799NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000572942ENST00000378799NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000572942ENST00000535424NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000572942ENST00000535424NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000572942ENST00000541571NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000572942ENST00000541571NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000572942ENST00000544564NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000572942ENST00000544564NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000573580ENST00000329908NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000573580ENST00000378798NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000573580ENST00000378799NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000573580ENST00000535424NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000573580ENST00000541571NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000573580ENST00000544564NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000575076ENST00000329908NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000575076ENST00000329908NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000575076ENST00000378798NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000575076ENST00000378798NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000575076ENST00000378799NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000575076ENST00000378799NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000575076ENST00000535424NAA60chr16

3497620

+IST1chr16

71949529

+
intron-5UTRENST00000575076ENST00000535424NAA60chr16

3493827

+IST1chr16

71949529

+
intron-5UTRENST00000575076ENST00000541571NAA60chr16

3497620

+IST1chr16

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check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score

Top

Fusion Genomic Features for NAA60-IST1


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
NAA60chr163493827+IST1chr1671949528+6.82E-050.9999318
NAA60chr163493827+IST1chr1671949528+6.82E-050.9999318

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

Top

Fusion Protein Features for NAA60-IST1


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/:3497620/:71949529)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
NAA60

Q9H7X0

IST1

P53990

FUNCTION: N-alpha-acetyltransferase that specifically mediates the acetylation of N-terminal residues of the transmembrane proteins, with a strong preference for N-termini facing the cytosol (PubMed:25732826). Displays N-terminal acetyltransferase activity towards a range of N-terminal sequences including those starting with Met-Lys, Met-Val, Met-Ala and Met-Met (PubMed:21750686, PubMed:25732826, PubMed:27550639, PubMed:27320834). Required for normal chromosomal segregation during anaphase (PubMed:21750686). May also show histone acetyltransferase activity; such results are however unclear in vivo and would require additional experimental evidences (PubMed:21981917). {ECO:0000269|PubMed:21750686, ECO:0000269|PubMed:25732826, ECO:0000269|PubMed:27320834, ECO:0000269|PubMed:27550639, ECO:0000305|PubMed:21981917}.FUNCTION: ESCRT-III-like protein involved in specific functions of the ESCRT machinery. Is required for efficient abscission during cytokinesis, but not for HIV-1 budding. The involvement in the MVB pathway is not established. Involved in recruiting VPS4A and/or VPS4B to the midbody of dividing cells (PubMed:19129479, PubMed:19129480). During late anaphase, involved in nuclear envelope reassembly and mitotic spindle disassembly together with the ESCRT-III complex: IST1 acts by mediating the recruitment of SPAST to the nuclear membrane, leading to microtubule severing (PubMed:26040712). Regulates early endosomal tubulation together with the ESCRT-III complex by mediating the recruitment of SPAST (PubMed:23897888). {ECO:0000269|PubMed:19129479, ECO:0000269|PubMed:19129480, ECO:0000269|PubMed:23897888, ECO:0000269|PubMed:26040712}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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Fusion Gene Sequence for NAA60-IST1


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.

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Fusion Gene PPI Analysis for NAA60-IST1


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for NAA60-IST1


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for NAA60-IST1


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource