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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:NFX1-DNAJA1 (FusionGDB2 ID:59009)

Fusion Gene Summary for NFX1-DNAJA1

check button Fusion gene summary
Fusion gene informationFusion gene name: NFX1-DNAJA1
Fusion gene ID: 59009
HgeneTgene
Gene symbol

NFX1

DNAJA1

Gene ID

4799

3301

Gene namenuclear transcription factor, X-box binding 1DnaJ heat shock protein family (Hsp40) member A1
SynonymsNFX2|TEG-42|Tex42DJ-2|DjA1|HDJ2|HSDJ|HSJ-2|HSJ2|HSPF4|NEDD7|hDJ-2
Cytomap

9p13.3

9p21.1

Type of geneprotein-codingprotein-coding
Descriptiontranscriptional repressor NF-X1nuclear transcription factor, X box-binding protein 1dnaJ homolog subfamily A member 1DnaJ (Hsp40) homolog, subfamily A, member 1dnaJ protein homolog 2heat shock 40 kDa protein 4heat shock protein J2heat shock protein, DNAJ-like 2human DnaJ protein 2neural precursor cell expressed, developmentally do
Modification date2020031320200313
UniProtAcc

Q12986

P31689

Ensembl transtripts involved in fusion geneENST00000318524, ENST00000379521, 
ENST00000379540, ENST00000463421, 
ENST00000495015, ENST00000544625, 
ENST00000330899, 
Fusion gene scores* DoF score16 X 12 X 11=21122 X 5 X 4=40
# samples 225
** MAII scorelog2(22/2112*10)=-3.26303440583379
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(5/40*10)=0.321928094887362
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: NFX1 [Title/Abstract] AND DNAJA1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointNFX1(33290595)-DNAJA1(33029883), # samples:3
Anticipated loss of major functional domain due to fusion event.NFX1-DNAJA1 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
NFX1-DNAJA1 seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneNFX1

GO:0000122

negative regulation of transcription by RNA polymerase II

7964459

HgeneNFX1

GO:0051865

protein autoubiquitination

10500182

TgeneDNAJA1

GO:0031397

negative regulation of protein ubiquitination

12150907

TgeneDNAJA1

GO:0051223

regulation of protein transport

14752510

TgeneDNAJA1

GO:1903748

negative regulation of establishment of protein localization to mitochondrion

14752510

TgeneDNAJA1

GO:1905259

negative regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway

14752510


check buttonFusion gene breakpoints across NFX1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across DNAJA1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4BRCATCGA-A7-A0CG-01ANFX1chr9

33319125

+DNAJA1chr9

33038683

+
ChimerDB4OVTCGA-61-1743NFX1chr9

33328676

+DNAJA1chr9

33034213

+
ChimerDB4UCSTCGA-N8-A56S-01ANFX1chr9

33290595

-DNAJA1chr9

33029883

+
ChimerDB4UCSTCGA-N8-A56S-01ANFX1chr9

33290595

+DNAJA1chr9

33029883

+
ChimerDB4UCSTCGA-N8-A56SNFX1chr9

33290595

+DNAJA1chr9

33029882

+
ChimerDB4UCSTCGA-N8-A56SNFX1chr9

33290595

+DNAJA1chr9

33029883

+


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Fusion Gene ORF analysis for NFX1-DNAJA1

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-3UTRENST00000318524ENST00000495015NFX1chr9

33319125

+DNAJA1chr9

33038683

+
5CDS-3UTRENST00000318524ENST00000495015NFX1chr9

33328676

+DNAJA1chr9

33034213

+
5CDS-3UTRENST00000379521ENST00000495015NFX1chr9

33319125

+DNAJA1chr9

33038683

+
5CDS-3UTRENST00000379521ENST00000495015NFX1chr9

33328676

+DNAJA1chr9

33034213

+
5CDS-3UTRENST00000379540ENST00000495015NFX1chr9

33319125

+DNAJA1chr9

33038683

+
5CDS-3UTRENST00000379540ENST00000495015NFX1chr9

33328676

+DNAJA1chr9

33034213

+
5CDS-5UTRENST00000318524ENST00000544625NFX1chr9

33290595

+DNAJA1chr9

33029883

+
5CDS-5UTRENST00000318524ENST00000544625NFX1chr9

33290595

+DNAJA1chr9

33029882

+
5CDS-5UTRENST00000379521ENST00000544625NFX1chr9

33290595

+DNAJA1chr9

33029883

+
5CDS-5UTRENST00000379521ENST00000544625NFX1chr9

33290595

+DNAJA1chr9

33029882

+
5CDS-5UTRENST00000379540ENST00000544625NFX1chr9

33290595

+DNAJA1chr9

33029883

+
5CDS-5UTRENST00000379540ENST00000544625NFX1chr9

33290595

+DNAJA1chr9

33029882

+
5CDS-intronENST00000318524ENST00000495015NFX1chr9

33290595

+DNAJA1chr9

33029883

+
5CDS-intronENST00000318524ENST00000495015NFX1chr9

33290595

+DNAJA1chr9

33029882

+
5CDS-intronENST00000379521ENST00000495015NFX1chr9

33290595

+DNAJA1chr9

33029883

+
5CDS-intronENST00000379521ENST00000495015NFX1chr9

33290595

+DNAJA1chr9

33029882

+
5CDS-intronENST00000379540ENST00000495015NFX1chr9

33290595

+DNAJA1chr9

33029883

+
5CDS-intronENST00000379540ENST00000495015NFX1chr9

33290595

+DNAJA1chr9

33029882

+
Frame-shiftENST00000318524ENST00000330899NFX1chr9

33328676

+DNAJA1chr9

33034213

+
Frame-shiftENST00000318524ENST00000544625NFX1chr9

33319125

+DNAJA1chr9

33038683

+
Frame-shiftENST00000318524ENST00000544625NFX1chr9

33328676

+DNAJA1chr9

33034213

+
Frame-shiftENST00000379521ENST00000330899NFX1chr9

33328676

+DNAJA1chr9

33034213

+
Frame-shiftENST00000379521ENST00000544625NFX1chr9

33319125

+DNAJA1chr9

33038683

+
Frame-shiftENST00000379521ENST00000544625NFX1chr9

33328676

+DNAJA1chr9

33034213

+
Frame-shiftENST00000379540ENST00000330899NFX1chr9

33328676

+DNAJA1chr9

33034213

+
Frame-shiftENST00000379540ENST00000544625NFX1chr9

33319125

+DNAJA1chr9

33038683

+
Frame-shiftENST00000379540ENST00000544625NFX1chr9

33328676

+DNAJA1chr9

33034213

+
In-frameENST00000318524ENST00000330899NFX1chr9

33319125

+DNAJA1chr9

33038683

+
In-frameENST00000318524ENST00000330899NFX1chr9

33290595

+DNAJA1chr9

33029883

+
In-frameENST00000318524ENST00000330899NFX1chr9

33290595

+DNAJA1chr9

33029882

+
In-frameENST00000379521ENST00000330899NFX1chr9

33319125

+DNAJA1chr9

33038683

+
In-frameENST00000379521ENST00000330899NFX1chr9

33290595

+DNAJA1chr9

33029883

+
In-frameENST00000379521ENST00000330899NFX1chr9

33290595

+DNAJA1chr9

33029882

+
In-frameENST00000379540ENST00000330899NFX1chr9

33319125

+DNAJA1chr9

33038683

+
In-frameENST00000379540ENST00000330899NFX1chr9

33290595

+DNAJA1chr9

33029883

+
In-frameENST00000379540ENST00000330899NFX1chr9

33290595

+DNAJA1chr9

33029882

+
intron-3CDSENST00000463421ENST00000330899NFX1chr9

33319125

+DNAJA1chr9

33038683

+
intron-3CDSENST00000463421ENST00000330899NFX1chr9

33328676

+DNAJA1chr9

33034213

+
intron-3CDSENST00000463421ENST00000330899NFX1chr9

33290595

+DNAJA1chr9

33029883

+
intron-3CDSENST00000463421ENST00000330899NFX1chr9

33290595

+DNAJA1chr9

33029882

+
intron-3CDSENST00000463421ENST00000544625NFX1chr9

33319125

+DNAJA1chr9

33038683

+
intron-3CDSENST00000463421ENST00000544625NFX1chr9

33328676

+DNAJA1chr9

33034213

+
intron-3UTRENST00000463421ENST00000495015NFX1chr9

33319125

+DNAJA1chr9

33038683

+
intron-3UTRENST00000463421ENST00000495015NFX1chr9

33328676

+DNAJA1chr9

33034213

+
intron-5UTRENST00000463421ENST00000544625NFX1chr9

33290595

+DNAJA1chr9

33029883

+
intron-5UTRENST00000463421ENST00000544625NFX1chr9

33290595

+DNAJA1chr9

33029882

+
intron-intronENST00000463421ENST00000495015NFX1chr9

33290595

+DNAJA1chr9

33029883

+
intron-intronENST00000463421ENST00000495015NFX1chr9

33290595

+DNAJA1chr9

33029882

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000379540NFX1chr933319125+ENST00000330899DNAJA1chr933038683+31911968501981643
ENST00000379521NFX1chr933319125+ENST00000330899DNAJA1chr933038683+31901967491980643
ENST00000318524NFX1chr933319125+ENST00000330899DNAJA1chr933038683+31571934161947643
ENST00000379540NFX1chr933290595+ENST00000330899DNAJA1chr933029883+19758750970306
ENST00000379521NFX1chr933290595+ENST00000330899DNAJA1chr933029883+19748649969306
ENST00000318524NFX1chr933290595+ENST00000330899DNAJA1chr933029883+19415316936306
ENST00000379540NFX1chr933290595+ENST00000330899DNAJA1chr933029882+19758750970306
ENST00000379521NFX1chr933290595+ENST00000330899DNAJA1chr933029882+19748649969306
ENST00000318524NFX1chr933290595+ENST00000330899DNAJA1chr933029882+19415316936306

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000379540ENST00000330899NFX1chr933319125+DNAJA1chr933038683+0.0015547540.9984452
ENST00000379521ENST00000330899NFX1chr933319125+DNAJA1chr933038683+0.0015515950.9984484
ENST00000318524ENST00000330899NFX1chr933319125+DNAJA1chr933038683+0.0016085080.99839145
ENST00000379540ENST00000330899NFX1chr933290595+DNAJA1chr933029883+0.0002674840.99973255
ENST00000379521ENST00000330899NFX1chr933290595+DNAJA1chr933029883+0.0002622910.9997377
ENST00000318524ENST00000330899NFX1chr933290595+DNAJA1chr933029883+0.0002866350.99971336
ENST00000379540ENST00000330899NFX1chr933290595+DNAJA1chr933029882+0.0002674840.99973255
ENST00000379521ENST00000330899NFX1chr933290595+DNAJA1chr933029882+0.0002622910.9997377
ENST00000318524ENST00000330899NFX1chr933290595+DNAJA1chr933029882+0.0002866350.99971336

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Fusion Genomic Features for NFX1-DNAJA1


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
NFX1chr933290595+DNAJA1chr933029882+0.0013776130.9986224
NFX1chr933290595+DNAJA1chr933029882+0.0013776130.9986224
NFX1chr933319125+DNAJA1chr933038682+7.10E-070.9999993
NFX1chr933328676+DNAJA1chr933034213+2.62E-070.99999976
NFX1chr933290595+DNAJA1chr933029882+0.0013776130.9986224
NFX1chr933290595+DNAJA1chr933029882+0.0013776130.9986224
NFX1chr933319125+DNAJA1chr933038682+7.10E-070.9999993
NFX1chr933328676+DNAJA1chr933034213+2.62E-070.99999976

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

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Fusion Protein Features for NFX1-DNAJA1


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr9:33290595/chr9:33029883)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
NFX1

Q12986

DNAJA1

P31689

FUNCTION: Binds to the X-box motif of MHC class II genes and represses their expression. May play an important role in regulating the duration of an inflammatory response by limiting the period in which MHC class II molecules are induced by interferon-gamma. Isoform 3 binds to the X-box motif of TERT promoter and represses its expression. Together with PABPC1 or PABPC4, isoform 1 acts as a coactivator for TERT expression. Mediates E2-dependent ubiquitination. {ECO:0000269|PubMed:10500182, ECO:0000269|PubMed:15371341, ECO:0000269|PubMed:17267499}.FUNCTION: Co-chaperone for HSPA8/Hsc70 (PubMed:10816573). Stimulates ATP hydrolysis, but not the folding of unfolded proteins mediated by HSPA1A (in vitro) (PubMed:24318877). Plays a role in protein transport into mitochondria via its role as co-chaperone. Functions as co-chaperone for HSPA1B and negatively regulates the translocation of BAX from the cytosol to mitochondria in response to cellular stress, thereby protecting cells against apoptosis (PubMed:14752510). Promotes apoptosis in response to cellular stress mediated by exposure to anisomycin or UV (PubMed:24512202). {ECO:0000269|PubMed:10816573, ECO:0000269|PubMed:14752510, ECO:0000269|PubMed:24318877, ECO:0000269|PubMed:24512202, ECO:0000269|PubMed:9192730}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneNFX1chr9:33319125chr9:33038683ENST00000318524+916358_409635834.0Zinc fingerRING-type%3B atypical
HgeneNFX1chr9:33319125chr9:33038683ENST00000318524+916453_471635834.0Zinc fingerNote=NF-X1-type 1
HgeneNFX1chr9:33319125chr9:33038683ENST00000318524+916506_525635834.0Zinc fingerNote=NF-X1-type 2
HgeneNFX1chr9:33319125chr9:33038683ENST00000318524+916567_586635834.0Zinc fingerNote=NF-X1-type 3
HgeneNFX1chr9:33319125chr9:33038683ENST00000379521+921358_4096351025.0Zinc fingerRING-type%3B atypical
HgeneNFX1chr9:33319125chr9:33038683ENST00000379521+921453_4716351025.0Zinc fingerNote=NF-X1-type 1
HgeneNFX1chr9:33319125chr9:33038683ENST00000379521+921506_5256351025.0Zinc fingerNote=NF-X1-type 2
HgeneNFX1chr9:33319125chr9:33038683ENST00000379521+921567_5866351025.0Zinc fingerNote=NF-X1-type 3
HgeneNFX1chr9:33319125chr9:33038683ENST00000379540+924358_4096351121.0Zinc fingerRING-type%3B atypical
HgeneNFX1chr9:33319125chr9:33038683ENST00000379540+924453_4716351121.0Zinc fingerNote=NF-X1-type 1
HgeneNFX1chr9:33319125chr9:33038683ENST00000379540+924506_5256351121.0Zinc fingerNote=NF-X1-type 2
HgeneNFX1chr9:33319125chr9:33038683ENST00000379540+924567_5866351121.0Zinc fingerNote=NF-X1-type 3
TgeneDNAJA1chr9:33290595chr9:33029882ENST0000033089929134_141103398.0RepeatNote=CXXCXGXG motif
TgeneDNAJA1chr9:33290595chr9:33029882ENST0000033089929150_157103398.0RepeatNote=CXXCXGXG motif
TgeneDNAJA1chr9:33290595chr9:33029882ENST0000033089929177_184103398.0RepeatNote=CXXCXGXG motif
TgeneDNAJA1chr9:33290595chr9:33029882ENST0000033089929193_200103398.0RepeatNote=CXXCXGXG motif
TgeneDNAJA1chr9:33290595chr9:33029883ENST0000033089929134_141103398.0RepeatNote=CXXCXGXG motif
TgeneDNAJA1chr9:33290595chr9:33029883ENST0000033089929150_157103398.0RepeatNote=CXXCXGXG motif
TgeneDNAJA1chr9:33290595chr9:33029883ENST0000033089929177_184103398.0RepeatNote=CXXCXGXG motif
TgeneDNAJA1chr9:33290595chr9:33029883ENST0000033089929193_200103398.0RepeatNote=CXXCXGXG motif
TgeneDNAJA1chr9:33290595chr9:33029882ENST0000033089929121_205103398.0Zinc fingerNote=CR-type
TgeneDNAJA1chr9:33290595chr9:33029883ENST0000033089929121_205103398.0Zinc fingerNote=CR-type

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneNFX1chr9:33290595chr9:33029882ENST00000318524+1161084_10898834.0Compositional biasNote=Poly-Pro
HgeneNFX1chr9:33290595chr9:33029882ENST00000379521+1211084_108981025.0Compositional biasNote=Poly-Pro
HgeneNFX1chr9:33290595chr9:33029882ENST00000379540+1241084_108981121.0Compositional biasNote=Poly-Pro
HgeneNFX1chr9:33290595chr9:33029883ENST00000318524+1161084_10898834.0Compositional biasNote=Poly-Pro
HgeneNFX1chr9:33290595chr9:33029883ENST00000379521+1211084_108981025.0Compositional biasNote=Poly-Pro
HgeneNFX1chr9:33290595chr9:33029883ENST00000379540+1241084_108981121.0Compositional biasNote=Poly-Pro
HgeneNFX1chr9:33319125chr9:33038683ENST00000318524+9161084_1089635834.0Compositional biasNote=Poly-Pro
HgeneNFX1chr9:33319125chr9:33038683ENST00000379521+9211084_10896351025.0Compositional biasNote=Poly-Pro
HgeneNFX1chr9:33319125chr9:33038683ENST00000379540+9241084_10896351121.0Compositional biasNote=Poly-Pro
HgeneNFX1chr9:33290595chr9:33029882ENST00000318524+116994_10628834.0DomainR3H
HgeneNFX1chr9:33290595chr9:33029882ENST00000379521+121994_106281025.0DomainR3H
HgeneNFX1chr9:33290595chr9:33029882ENST00000379540+124994_106281121.0DomainR3H
HgeneNFX1chr9:33290595chr9:33029883ENST00000318524+116994_10628834.0DomainR3H
HgeneNFX1chr9:33290595chr9:33029883ENST00000379521+121994_106281025.0DomainR3H
HgeneNFX1chr9:33290595chr9:33029883ENST00000379540+124994_106281121.0DomainR3H
HgeneNFX1chr9:33319125chr9:33038683ENST00000318524+916994_1062635834.0DomainR3H
HgeneNFX1chr9:33319125chr9:33038683ENST00000379521+921994_10626351025.0DomainR3H
HgeneNFX1chr9:33319125chr9:33038683ENST00000379540+924994_10626351121.0DomainR3H
HgeneNFX1chr9:33290595chr9:33029882ENST00000318524+116358_4098834.0Zinc fingerRING-type%3B atypical
HgeneNFX1chr9:33290595chr9:33029882ENST00000318524+116453_4718834.0Zinc fingerNote=NF-X1-type 1
HgeneNFX1chr9:33290595chr9:33029882ENST00000318524+116506_5258834.0Zinc fingerNote=NF-X1-type 2
HgeneNFX1chr9:33290595chr9:33029882ENST00000318524+116567_5868834.0Zinc fingerNote=NF-X1-type 3
HgeneNFX1chr9:33290595chr9:33029882ENST00000318524+116632_6558834.0Zinc fingerNote=NF-X1-type 4
HgeneNFX1chr9:33290595chr9:33029882ENST00000318524+116694_7138834.0Zinc fingerNote=NF-X1-type 5
HgeneNFX1chr9:33290595chr9:33029882ENST00000318524+116721_7408834.0Zinc fingerNote=NF-X1-type 6
HgeneNFX1chr9:33290595chr9:33029882ENST00000318524+116832_8548834.0Zinc fingerNote=NF-X1-type 7
HgeneNFX1chr9:33290595chr9:33029882ENST00000318524+116863_8848834.0Zinc fingerNote=NF-X1-type 8
HgeneNFX1chr9:33290595chr9:33029882ENST00000379521+121358_40981025.0Zinc fingerRING-type%3B atypical
HgeneNFX1chr9:33290595chr9:33029882ENST00000379521+121453_47181025.0Zinc fingerNote=NF-X1-type 1
HgeneNFX1chr9:33290595chr9:33029882ENST00000379521+121506_52581025.0Zinc fingerNote=NF-X1-type 2
HgeneNFX1chr9:33290595chr9:33029882ENST00000379521+121567_58681025.0Zinc fingerNote=NF-X1-type 3
HgeneNFX1chr9:33290595chr9:33029882ENST00000379521+121632_65581025.0Zinc fingerNote=NF-X1-type 4
HgeneNFX1chr9:33290595chr9:33029882ENST00000379521+121694_71381025.0Zinc fingerNote=NF-X1-type 5
HgeneNFX1chr9:33290595chr9:33029882ENST00000379521+121721_74081025.0Zinc fingerNote=NF-X1-type 6
HgeneNFX1chr9:33290595chr9:33029882ENST00000379521+121832_85481025.0Zinc fingerNote=NF-X1-type 7
HgeneNFX1chr9:33290595chr9:33029882ENST00000379521+121863_88481025.0Zinc fingerNote=NF-X1-type 8
HgeneNFX1chr9:33290595chr9:33029882ENST00000379540+124358_40981121.0Zinc fingerRING-type%3B atypical
HgeneNFX1chr9:33290595chr9:33029882ENST00000379540+124453_47181121.0Zinc fingerNote=NF-X1-type 1
HgeneNFX1chr9:33290595chr9:33029882ENST00000379540+124506_52581121.0Zinc fingerNote=NF-X1-type 2
HgeneNFX1chr9:33290595chr9:33029882ENST00000379540+124567_58681121.0Zinc fingerNote=NF-X1-type 3
HgeneNFX1chr9:33290595chr9:33029882ENST00000379540+124632_65581121.0Zinc fingerNote=NF-X1-type 4
HgeneNFX1chr9:33290595chr9:33029882ENST00000379540+124694_71381121.0Zinc fingerNote=NF-X1-type 5
HgeneNFX1chr9:33290595chr9:33029882ENST00000379540+124721_74081121.0Zinc fingerNote=NF-X1-type 6
HgeneNFX1chr9:33290595chr9:33029882ENST00000379540+124832_85481121.0Zinc fingerNote=NF-X1-type 7
HgeneNFX1chr9:33290595chr9:33029882ENST00000379540+124863_88481121.0Zinc fingerNote=NF-X1-type 8
HgeneNFX1chr9:33290595chr9:33029883ENST00000318524+116358_4098834.0Zinc fingerRING-type%3B atypical
HgeneNFX1chr9:33290595chr9:33029883ENST00000318524+116453_4718834.0Zinc fingerNote=NF-X1-type 1
HgeneNFX1chr9:33290595chr9:33029883ENST00000318524+116506_5258834.0Zinc fingerNote=NF-X1-type 2
HgeneNFX1chr9:33290595chr9:33029883ENST00000318524+116567_5868834.0Zinc fingerNote=NF-X1-type 3
HgeneNFX1chr9:33290595chr9:33029883ENST00000318524+116632_6558834.0Zinc fingerNote=NF-X1-type 4
HgeneNFX1chr9:33290595chr9:33029883ENST00000318524+116694_7138834.0Zinc fingerNote=NF-X1-type 5
HgeneNFX1chr9:33290595chr9:33029883ENST00000318524+116721_7408834.0Zinc fingerNote=NF-X1-type 6
HgeneNFX1chr9:33290595chr9:33029883ENST00000318524+116832_8548834.0Zinc fingerNote=NF-X1-type 7
HgeneNFX1chr9:33290595chr9:33029883ENST00000318524+116863_8848834.0Zinc fingerNote=NF-X1-type 8
HgeneNFX1chr9:33290595chr9:33029883ENST00000379521+121358_40981025.0Zinc fingerRING-type%3B atypical
HgeneNFX1chr9:33290595chr9:33029883ENST00000379521+121453_47181025.0Zinc fingerNote=NF-X1-type 1
HgeneNFX1chr9:33290595chr9:33029883ENST00000379521+121506_52581025.0Zinc fingerNote=NF-X1-type 2
HgeneNFX1chr9:33290595chr9:33029883ENST00000379521+121567_58681025.0Zinc fingerNote=NF-X1-type 3
HgeneNFX1chr9:33290595chr9:33029883ENST00000379521+121632_65581025.0Zinc fingerNote=NF-X1-type 4
HgeneNFX1chr9:33290595chr9:33029883ENST00000379521+121694_71381025.0Zinc fingerNote=NF-X1-type 5
HgeneNFX1chr9:33290595chr9:33029883ENST00000379521+121721_74081025.0Zinc fingerNote=NF-X1-type 6
HgeneNFX1chr9:33290595chr9:33029883ENST00000379521+121832_85481025.0Zinc fingerNote=NF-X1-type 7
HgeneNFX1chr9:33290595chr9:33029883ENST00000379521+121863_88481025.0Zinc fingerNote=NF-X1-type 8
HgeneNFX1chr9:33290595chr9:33029883ENST00000379540+124358_40981121.0Zinc fingerRING-type%3B atypical
HgeneNFX1chr9:33290595chr9:33029883ENST00000379540+124453_47181121.0Zinc fingerNote=NF-X1-type 1
HgeneNFX1chr9:33290595chr9:33029883ENST00000379540+124506_52581121.0Zinc fingerNote=NF-X1-type 2
HgeneNFX1chr9:33290595chr9:33029883ENST00000379540+124567_58681121.0Zinc fingerNote=NF-X1-type 3
HgeneNFX1chr9:33290595chr9:33029883ENST00000379540+124632_65581121.0Zinc fingerNote=NF-X1-type 4
HgeneNFX1chr9:33290595chr9:33029883ENST00000379540+124694_71381121.0Zinc fingerNote=NF-X1-type 5
HgeneNFX1chr9:33290595chr9:33029883ENST00000379540+124721_74081121.0Zinc fingerNote=NF-X1-type 6
HgeneNFX1chr9:33290595chr9:33029883ENST00000379540+124832_85481121.0Zinc fingerNote=NF-X1-type 7
HgeneNFX1chr9:33290595chr9:33029883ENST00000379540+124863_88481121.0Zinc fingerNote=NF-X1-type 8
HgeneNFX1chr9:33319125chr9:33038683ENST00000318524+916632_655635834.0Zinc fingerNote=NF-X1-type 4
HgeneNFX1chr9:33319125chr9:33038683ENST00000318524+916694_713635834.0Zinc fingerNote=NF-X1-type 5
HgeneNFX1chr9:33319125chr9:33038683ENST00000318524+916721_740635834.0Zinc fingerNote=NF-X1-type 6
HgeneNFX1chr9:33319125chr9:33038683ENST00000318524+916832_854635834.0Zinc fingerNote=NF-X1-type 7
HgeneNFX1chr9:33319125chr9:33038683ENST00000318524+916863_884635834.0Zinc fingerNote=NF-X1-type 8
HgeneNFX1chr9:33319125chr9:33038683ENST00000379521+921632_6556351025.0Zinc fingerNote=NF-X1-type 4
HgeneNFX1chr9:33319125chr9:33038683ENST00000379521+921694_7136351025.0Zinc fingerNote=NF-X1-type 5
HgeneNFX1chr9:33319125chr9:33038683ENST00000379521+921721_7406351025.0Zinc fingerNote=NF-X1-type 6
HgeneNFX1chr9:33319125chr9:33038683ENST00000379521+921832_8546351025.0Zinc fingerNote=NF-X1-type 7
HgeneNFX1chr9:33319125chr9:33038683ENST00000379521+921863_8846351025.0Zinc fingerNote=NF-X1-type 8
HgeneNFX1chr9:33319125chr9:33038683ENST00000379540+924632_6556351121.0Zinc fingerNote=NF-X1-type 4
HgeneNFX1chr9:33319125chr9:33038683ENST00000379540+924694_7136351121.0Zinc fingerNote=NF-X1-type 5
HgeneNFX1chr9:33319125chr9:33038683ENST00000379540+924721_7406351121.0Zinc fingerNote=NF-X1-type 6
HgeneNFX1chr9:33319125chr9:33038683ENST00000379540+924832_8546351121.0Zinc fingerNote=NF-X1-type 7
HgeneNFX1chr9:33319125chr9:33038683ENST00000379540+924863_8846351121.0Zinc fingerNote=NF-X1-type 8
TgeneDNAJA1chr9:33290595chr9:33029882ENST000003308992975_96103398.0Compositional biasNote=Gly-rich
TgeneDNAJA1chr9:33290595chr9:33029883ENST000003308992975_96103398.0Compositional biasNote=Gly-rich
TgeneDNAJA1chr9:33319125chr9:33038683ENST000003308997975_96325398.0Compositional biasNote=Gly-rich
TgeneDNAJA1chr9:33290595chr9:33029882ENST00000330899296_68103398.0DomainNote=J
TgeneDNAJA1chr9:33290595chr9:33029883ENST00000330899296_68103398.0DomainNote=J
TgeneDNAJA1chr9:33319125chr9:33038683ENST00000330899796_68325398.0DomainNote=J
TgeneDNAJA1chr9:33319125chr9:33038683ENST0000033089979134_141325398.0RepeatNote=CXXCXGXG motif
TgeneDNAJA1chr9:33319125chr9:33038683ENST0000033089979150_157325398.0RepeatNote=CXXCXGXG motif
TgeneDNAJA1chr9:33319125chr9:33038683ENST0000033089979177_184325398.0RepeatNote=CXXCXGXG motif
TgeneDNAJA1chr9:33319125chr9:33038683ENST0000033089979193_200325398.0RepeatNote=CXXCXGXG motif
TgeneDNAJA1chr9:33319125chr9:33038683ENST0000033089979121_205325398.0Zinc fingerNote=CR-type


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Fusion Gene Sequence for NFX1-DNAJA1


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>59009_59009_1_NFX1-DNAJA1_NFX1_chr9_33290595_ENST00000318524_DNAJA1_chr9_33029882_ENST00000330899_length(transcript)=1941nt_BP=53nt
CAGCTCGATCTAGGTTCTGCGGCACGGGATGGCGGAGGCGCCTCCTGTCTCAGGTAAAAATGTTGTACATCAGCTCTCAGTAACCCTAGA
AGACTTATATAATGGTGCAACAAGAAAACTGGCTCTGCAAAAGAATGTGATTTGTGACAAATGTGAAGGTAGAGGAGGTAAGAAAGGAGC
AGTAGAGTGCTGTCCCAATTGCCGAGGTACTGGAATGCAAATAAGAATTCATCAGATAGGACCTGGAATGGTTCAGCAAATTCAGTCTGT
GTGCATGGAGTGCCAGGGCCATGGGGAGCGGATCAGTCCTAAAGATAGATGTAAAAGCTGCAACGGAAGGAAGATAGTTCGAGAGAAGAA
AATTTTAGAAGTTCATATTGACAAAGGCATGAAAGATGGCCAGAAGATAACATTCCATGGTGAAGGAGACCAAGAACCAGGACTGGAGCC
AGGCGATATTATCATTGTGTTAGATCAGAAGGACCATGCTGTTTTTACTCGACGAGGAGAAGACCTTTTCATGTGTATGGACATACAGCT
CGTTGAAGCACTGTGTGGCTTCCAGAAGCCAATATCTACTCTTGACAACCGAACCATCGTCATCACCTCTCATCCAGGTCAGATTGTCAA
GCATGGAGATATCAAGTGTGTACTAAATGAAGGCATGCCAATTTATCGTAGACCATATGAAAAGGGTCGCCTAATCATCGAATTTAAGGT
AAACTTTCCTGAGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAACTCCTACCCGAGAGGAAGGAAGTGGAAGAGACTGA
TGAGATGGACCAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCCACTACAATGGAGAAGCATATGAGGATGATGAACA
TCATCCCAGAGGTGGTGTTCAGTGTCAGACCTCTTAATGGGCCAGTGAATAACACTCACTGCTGGCATTTAATGTGCAGTAGTGAATGAG
TGAAGGACTGTAATCATAATATGCTCACTACTTGCTCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTTTAAAAAGTTAAATGAAGAAT
AAACGCAAATATAAAAGCTCTGATTTTGCCCTGTATGTATGATGACTTCAGTGTGCAAGATGAAGTTTAATACCTGTAAAAACTACAAAG
AAGTTCCCCTAGCATTTCTAGGCCAAACCTTGTAATTGACTTCAGCTATGTACGTGGACAAGCTTAGACTGAAATGCTAGGTATATGTAT
TGGCTTCAGTGTATGACCCTTCATTGTTAAGCTATGAAAGTAAAACTCTGTATTTAACTGGCAATGAGGAAAAAAAAATTTTGTAGAGAA
GTGTTGGTCTGTATAGTTCTTTATATTAAGTGGGATTCATTGTAATGCCTCTGCATTTATTCTGTTGCCTCAGCTGTTACTTGAAGATGG
CGTAATATATAATTTATCCTGTGGTATCAGTGATAAAAATGATACCTTTCTGTAGGAGGGGTTTATCATAATATGCTGCTTCTTGAAGGC
TTGCACTTCCAGAATTGTGTTTCCTTCTGCTGTGCCATTCATATATATATACATATATATATATAATCTTGACCAGTCCTGGTCATTTGC
TCCCCTCCTTGTCTGTGGACCATGATAAGCCCAAGTAGTGACTTCAGAGCTGGGTAACAGAAATTAAAGTGAAAAGACCTTTACGTGGAG
AATTTGCATGCGTAATATAGGAAGGTGTTCTTTAGGTATGTTACAGGATTACTTTAAACCATTTGACTTTCGCTCCAAAGTTATGTTGGT
AGTATAGCAAATTATGATGAATAGCTTTAATTGTATGTTTAAAAGTCTCATATGTTCACATGCTTAAATCTGGGTATCAGAATTTAAGCA

>59009_59009_1_NFX1-DNAJA1_NFX1_chr9_33290595_ENST00000318524_DNAJA1_chr9_33029882_ENST00000330899_length(amino acids)=306AA_BP=10
MRHGMAEAPPVSGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQ
GHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALC
GFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETDEMDQV

--------------------------------------------------------------
>59009_59009_2_NFX1-DNAJA1_NFX1_chr9_33290595_ENST00000318524_DNAJA1_chr9_33029883_ENST00000330899_length(transcript)=1941nt_BP=53nt
CAGCTCGATCTAGGTTCTGCGGCACGGGATGGCGGAGGCGCCTCCTGTCTCAGGTAAAAATGTTGTACATCAGCTCTCAGTAACCCTAGA
AGACTTATATAATGGTGCAACAAGAAAACTGGCTCTGCAAAAGAATGTGATTTGTGACAAATGTGAAGGTAGAGGAGGTAAGAAAGGAGC
AGTAGAGTGCTGTCCCAATTGCCGAGGTACTGGAATGCAAATAAGAATTCATCAGATAGGACCTGGAATGGTTCAGCAAATTCAGTCTGT
GTGCATGGAGTGCCAGGGCCATGGGGAGCGGATCAGTCCTAAAGATAGATGTAAAAGCTGCAACGGAAGGAAGATAGTTCGAGAGAAGAA
AATTTTAGAAGTTCATATTGACAAAGGCATGAAAGATGGCCAGAAGATAACATTCCATGGTGAAGGAGACCAAGAACCAGGACTGGAGCC
AGGCGATATTATCATTGTGTTAGATCAGAAGGACCATGCTGTTTTTACTCGACGAGGAGAAGACCTTTTCATGTGTATGGACATACAGCT
CGTTGAAGCACTGTGTGGCTTCCAGAAGCCAATATCTACTCTTGACAACCGAACCATCGTCATCACCTCTCATCCAGGTCAGATTGTCAA
GCATGGAGATATCAAGTGTGTACTAAATGAAGGCATGCCAATTTATCGTAGACCATATGAAAAGGGTCGCCTAATCATCGAATTTAAGGT
AAACTTTCCTGAGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAACTCCTACCCGAGAGGAAGGAAGTGGAAGAGACTGA
TGAGATGGACCAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCCACTACAATGGAGAAGCATATGAGGATGATGAACA
TCATCCCAGAGGTGGTGTTCAGTGTCAGACCTCTTAATGGGCCAGTGAATAACACTCACTGCTGGCATTTAATGTGCAGTAGTGAATGAG
TGAAGGACTGTAATCATAATATGCTCACTACTTGCTCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTTTAAAAAGTTAAATGAAGAAT
AAACGCAAATATAAAAGCTCTGATTTTGCCCTGTATGTATGATGACTTCAGTGTGCAAGATGAAGTTTAATACCTGTAAAAACTACAAAG
AAGTTCCCCTAGCATTTCTAGGCCAAACCTTGTAATTGACTTCAGCTATGTACGTGGACAAGCTTAGACTGAAATGCTAGGTATATGTAT
TGGCTTCAGTGTATGACCCTTCATTGTTAAGCTATGAAAGTAAAACTCTGTATTTAACTGGCAATGAGGAAAAAAAAATTTTGTAGAGAA
GTGTTGGTCTGTATAGTTCTTTATATTAAGTGGGATTCATTGTAATGCCTCTGCATTTATTCTGTTGCCTCAGCTGTTACTTGAAGATGG
CGTAATATATAATTTATCCTGTGGTATCAGTGATAAAAATGATACCTTTCTGTAGGAGGGGTTTATCATAATATGCTGCTTCTTGAAGGC
TTGCACTTCCAGAATTGTGTTTCCTTCTGCTGTGCCATTCATATATATATACATATATATATATAATCTTGACCAGTCCTGGTCATTTGC
TCCCCTCCTTGTCTGTGGACCATGATAAGCCCAAGTAGTGACTTCAGAGCTGGGTAACAGAAATTAAAGTGAAAAGACCTTTACGTGGAG
AATTTGCATGCGTAATATAGGAAGGTGTTCTTTAGGTATGTTACAGGATTACTTTAAACCATTTGACTTTCGCTCCAAAGTTATGTTGGT
AGTATAGCAAATTATGATGAATAGCTTTAATTGTATGTTTAAAAGTCTCATATGTTCACATGCTTAAATCTGGGTATCAGAATTTAAGCA

>59009_59009_2_NFX1-DNAJA1_NFX1_chr9_33290595_ENST00000318524_DNAJA1_chr9_33029883_ENST00000330899_length(amino acids)=306AA_BP=10
MRHGMAEAPPVSGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQ
GHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALC
GFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETDEMDQV

--------------------------------------------------------------
>59009_59009_3_NFX1-DNAJA1_NFX1_chr9_33290595_ENST00000379521_DNAJA1_chr9_33029882_ENST00000330899_length(transcript)=1974nt_BP=86nt
ACGTGACCTGGTGACAGTGCTGACTTGGCTGTACAGCTCGATCTAGGTTCTGCGGCACGGGATGGCGGAGGCGCCTCCTGTCTCAGGTAA
AAATGTTGTACATCAGCTCTCAGTAACCCTAGAAGACTTATATAATGGTGCAACAAGAAAACTGGCTCTGCAAAAGAATGTGATTTGTGA
CAAATGTGAAGGTAGAGGAGGTAAGAAAGGAGCAGTAGAGTGCTGTCCCAATTGCCGAGGTACTGGAATGCAAATAAGAATTCATCAGAT
AGGACCTGGAATGGTTCAGCAAATTCAGTCTGTGTGCATGGAGTGCCAGGGCCATGGGGAGCGGATCAGTCCTAAAGATAGATGTAAAAG
CTGCAACGGAAGGAAGATAGTTCGAGAGAAGAAAATTTTAGAAGTTCATATTGACAAAGGCATGAAAGATGGCCAGAAGATAACATTCCA
TGGTGAAGGAGACCAAGAACCAGGACTGGAGCCAGGCGATATTATCATTGTGTTAGATCAGAAGGACCATGCTGTTTTTACTCGACGAGG
AGAAGACCTTTTCATGTGTATGGACATACAGCTCGTTGAAGCACTGTGTGGCTTCCAGAAGCCAATATCTACTCTTGACAACCGAACCAT
CGTCATCACCTCTCATCCAGGTCAGATTGTCAAGCATGGAGATATCAAGTGTGTACTAAATGAAGGCATGCCAATTTATCGTAGACCATA
TGAAAAGGGTCGCCTAATCATCGAATTTAAGGTAAACTTTCCTGAGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAACT
CCTACCCGAGAGGAAGGAAGTGGAAGAGACTGATGAGATGGACCAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCCA
CTACAATGGAGAAGCATATGAGGATGATGAACATCATCCCAGAGGTGGTGTTCAGTGTCAGACCTCTTAATGGGCCAGTGAATAACACTC
ACTGCTGGCATTTAATGTGCAGTAGTGAATGAGTGAAGGACTGTAATCATAATATGCTCACTACTTGCTCTTGTTTTTGTTTTAATAAAC
TATAGTAGTGTTTTAAAAAGTTAAATGAAGAATAAACGCAAATATAAAAGCTCTGATTTTGCCCTGTATGTATGATGACTTCAGTGTGCA
AGATGAAGTTTAATACCTGTAAAAACTACAAAGAAGTTCCCCTAGCATTTCTAGGCCAAACCTTGTAATTGACTTCAGCTATGTACGTGG
ACAAGCTTAGACTGAAATGCTAGGTATATGTATTGGCTTCAGTGTATGACCCTTCATTGTTAAGCTATGAAAGTAAAACTCTGTATTTAA
CTGGCAATGAGGAAAAAAAAATTTTGTAGAGAAGTGTTGGTCTGTATAGTTCTTTATATTAAGTGGGATTCATTGTAATGCCTCTGCATT
TATTCTGTTGCCTCAGCTGTTACTTGAAGATGGCGTAATATATAATTTATCCTGTGGTATCAGTGATAAAAATGATACCTTTCTGTAGGA
GGGGTTTATCATAATATGCTGCTTCTTGAAGGCTTGCACTTCCAGAATTGTGTTTCCTTCTGCTGTGCCATTCATATATATATACATATA
TATATATAATCTTGACCAGTCCTGGTCATTTGCTCCCCTCCTTGTCTGTGGACCATGATAAGCCCAAGTAGTGACTTCAGAGCTGGGTAA
CAGAAATTAAAGTGAAAAGACCTTTACGTGGAGAATTTGCATGCGTAATATAGGAAGGTGTTCTTTAGGTATGTTACAGGATTACTTTAA
ACCATTTGACTTTCGCTCCAAAGTTATGTTGGTAGTATAGCAAATTATGATGAATAGCTTTAATTGTATGTTTAAAAGTCTCATATGTTC

>59009_59009_3_NFX1-DNAJA1_NFX1_chr9_33290595_ENST00000379521_DNAJA1_chr9_33029882_ENST00000330899_length(amino acids)=306AA_BP=10
MRHGMAEAPPVSGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQ
GHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALC
GFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETDEMDQV

--------------------------------------------------------------
>59009_59009_4_NFX1-DNAJA1_NFX1_chr9_33290595_ENST00000379521_DNAJA1_chr9_33029883_ENST00000330899_length(transcript)=1974nt_BP=86nt
ACGTGACCTGGTGACAGTGCTGACTTGGCTGTACAGCTCGATCTAGGTTCTGCGGCACGGGATGGCGGAGGCGCCTCCTGTCTCAGGTAA
AAATGTTGTACATCAGCTCTCAGTAACCCTAGAAGACTTATATAATGGTGCAACAAGAAAACTGGCTCTGCAAAAGAATGTGATTTGTGA
CAAATGTGAAGGTAGAGGAGGTAAGAAAGGAGCAGTAGAGTGCTGTCCCAATTGCCGAGGTACTGGAATGCAAATAAGAATTCATCAGAT
AGGACCTGGAATGGTTCAGCAAATTCAGTCTGTGTGCATGGAGTGCCAGGGCCATGGGGAGCGGATCAGTCCTAAAGATAGATGTAAAAG
CTGCAACGGAAGGAAGATAGTTCGAGAGAAGAAAATTTTAGAAGTTCATATTGACAAAGGCATGAAAGATGGCCAGAAGATAACATTCCA
TGGTGAAGGAGACCAAGAACCAGGACTGGAGCCAGGCGATATTATCATTGTGTTAGATCAGAAGGACCATGCTGTTTTTACTCGACGAGG
AGAAGACCTTTTCATGTGTATGGACATACAGCTCGTTGAAGCACTGTGTGGCTTCCAGAAGCCAATATCTACTCTTGACAACCGAACCAT
CGTCATCACCTCTCATCCAGGTCAGATTGTCAAGCATGGAGATATCAAGTGTGTACTAAATGAAGGCATGCCAATTTATCGTAGACCATA
TGAAAAGGGTCGCCTAATCATCGAATTTAAGGTAAACTTTCCTGAGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAACT
CCTACCCGAGAGGAAGGAAGTGGAAGAGACTGATGAGATGGACCAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCCA
CTACAATGGAGAAGCATATGAGGATGATGAACATCATCCCAGAGGTGGTGTTCAGTGTCAGACCTCTTAATGGGCCAGTGAATAACACTC
ACTGCTGGCATTTAATGTGCAGTAGTGAATGAGTGAAGGACTGTAATCATAATATGCTCACTACTTGCTCTTGTTTTTGTTTTAATAAAC
TATAGTAGTGTTTTAAAAAGTTAAATGAAGAATAAACGCAAATATAAAAGCTCTGATTTTGCCCTGTATGTATGATGACTTCAGTGTGCA
AGATGAAGTTTAATACCTGTAAAAACTACAAAGAAGTTCCCCTAGCATTTCTAGGCCAAACCTTGTAATTGACTTCAGCTATGTACGTGG
ACAAGCTTAGACTGAAATGCTAGGTATATGTATTGGCTTCAGTGTATGACCCTTCATTGTTAAGCTATGAAAGTAAAACTCTGTATTTAA
CTGGCAATGAGGAAAAAAAAATTTTGTAGAGAAGTGTTGGTCTGTATAGTTCTTTATATTAAGTGGGATTCATTGTAATGCCTCTGCATT
TATTCTGTTGCCTCAGCTGTTACTTGAAGATGGCGTAATATATAATTTATCCTGTGGTATCAGTGATAAAAATGATACCTTTCTGTAGGA
GGGGTTTATCATAATATGCTGCTTCTTGAAGGCTTGCACTTCCAGAATTGTGTTTCCTTCTGCTGTGCCATTCATATATATATACATATA
TATATATAATCTTGACCAGTCCTGGTCATTTGCTCCCCTCCTTGTCTGTGGACCATGATAAGCCCAAGTAGTGACTTCAGAGCTGGGTAA
CAGAAATTAAAGTGAAAAGACCTTTACGTGGAGAATTTGCATGCGTAATATAGGAAGGTGTTCTTTAGGTATGTTACAGGATTACTTTAA
ACCATTTGACTTTCGCTCCAAAGTTATGTTGGTAGTATAGCAAATTATGATGAATAGCTTTAATTGTATGTTTAAAAGTCTCATATGTTC

>59009_59009_4_NFX1-DNAJA1_NFX1_chr9_33290595_ENST00000379521_DNAJA1_chr9_33029883_ENST00000330899_length(amino acids)=306AA_BP=10
MRHGMAEAPPVSGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQ
GHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALC
GFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETDEMDQV

--------------------------------------------------------------
>59009_59009_5_NFX1-DNAJA1_NFX1_chr9_33290595_ENST00000379540_DNAJA1_chr9_33029882_ENST00000330899_length(transcript)=1975nt_BP=87nt
CACGTGACCTGGTGACAGTGCTGACTTGGCTGTACAGCTCGATCTAGGTTCTGCGGCACGGGATGGCGGAGGCGCCTCCTGTCTCAGGTA
AAAATGTTGTACATCAGCTCTCAGTAACCCTAGAAGACTTATATAATGGTGCAACAAGAAAACTGGCTCTGCAAAAGAATGTGATTTGTG
ACAAATGTGAAGGTAGAGGAGGTAAGAAAGGAGCAGTAGAGTGCTGTCCCAATTGCCGAGGTACTGGAATGCAAATAAGAATTCATCAGA
TAGGACCTGGAATGGTTCAGCAAATTCAGTCTGTGTGCATGGAGTGCCAGGGCCATGGGGAGCGGATCAGTCCTAAAGATAGATGTAAAA
GCTGCAACGGAAGGAAGATAGTTCGAGAGAAGAAAATTTTAGAAGTTCATATTGACAAAGGCATGAAAGATGGCCAGAAGATAACATTCC
ATGGTGAAGGAGACCAAGAACCAGGACTGGAGCCAGGCGATATTATCATTGTGTTAGATCAGAAGGACCATGCTGTTTTTACTCGACGAG
GAGAAGACCTTTTCATGTGTATGGACATACAGCTCGTTGAAGCACTGTGTGGCTTCCAGAAGCCAATATCTACTCTTGACAACCGAACCA
TCGTCATCACCTCTCATCCAGGTCAGATTGTCAAGCATGGAGATATCAAGTGTGTACTAAATGAAGGCATGCCAATTTATCGTAGACCAT
ATGAAAAGGGTCGCCTAATCATCGAATTTAAGGTAAACTTTCCTGAGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAAC
TCCTACCCGAGAGGAAGGAAGTGGAAGAGACTGATGAGATGGACCAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCC
ACTACAATGGAGAAGCATATGAGGATGATGAACATCATCCCAGAGGTGGTGTTCAGTGTCAGACCTCTTAATGGGCCAGTGAATAACACT
CACTGCTGGCATTTAATGTGCAGTAGTGAATGAGTGAAGGACTGTAATCATAATATGCTCACTACTTGCTCTTGTTTTTGTTTTAATAAA
CTATAGTAGTGTTTTAAAAAGTTAAATGAAGAATAAACGCAAATATAAAAGCTCTGATTTTGCCCTGTATGTATGATGACTTCAGTGTGC
AAGATGAAGTTTAATACCTGTAAAAACTACAAAGAAGTTCCCCTAGCATTTCTAGGCCAAACCTTGTAATTGACTTCAGCTATGTACGTG
GACAAGCTTAGACTGAAATGCTAGGTATATGTATTGGCTTCAGTGTATGACCCTTCATTGTTAAGCTATGAAAGTAAAACTCTGTATTTA
ACTGGCAATGAGGAAAAAAAAATTTTGTAGAGAAGTGTTGGTCTGTATAGTTCTTTATATTAAGTGGGATTCATTGTAATGCCTCTGCAT
TTATTCTGTTGCCTCAGCTGTTACTTGAAGATGGCGTAATATATAATTTATCCTGTGGTATCAGTGATAAAAATGATACCTTTCTGTAGG
AGGGGTTTATCATAATATGCTGCTTCTTGAAGGCTTGCACTTCCAGAATTGTGTTTCCTTCTGCTGTGCCATTCATATATATATACATAT
ATATATATAATCTTGACCAGTCCTGGTCATTTGCTCCCCTCCTTGTCTGTGGACCATGATAAGCCCAAGTAGTGACTTCAGAGCTGGGTA
ACAGAAATTAAAGTGAAAAGACCTTTACGTGGAGAATTTGCATGCGTAATATAGGAAGGTGTTCTTTAGGTATGTTACAGGATTACTTTA
AACCATTTGACTTTCGCTCCAAAGTTATGTTGGTAGTATAGCAAATTATGATGAATAGCTTTAATTGTATGTTTAAAAGTCTCATATGTT

>59009_59009_5_NFX1-DNAJA1_NFX1_chr9_33290595_ENST00000379540_DNAJA1_chr9_33029882_ENST00000330899_length(amino acids)=306AA_BP=10
MRHGMAEAPPVSGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQ
GHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALC
GFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETDEMDQV

--------------------------------------------------------------
>59009_59009_6_NFX1-DNAJA1_NFX1_chr9_33290595_ENST00000379540_DNAJA1_chr9_33029883_ENST00000330899_length(transcript)=1975nt_BP=87nt
CACGTGACCTGGTGACAGTGCTGACTTGGCTGTACAGCTCGATCTAGGTTCTGCGGCACGGGATGGCGGAGGCGCCTCCTGTCTCAGGTA
AAAATGTTGTACATCAGCTCTCAGTAACCCTAGAAGACTTATATAATGGTGCAACAAGAAAACTGGCTCTGCAAAAGAATGTGATTTGTG
ACAAATGTGAAGGTAGAGGAGGTAAGAAAGGAGCAGTAGAGTGCTGTCCCAATTGCCGAGGTACTGGAATGCAAATAAGAATTCATCAGA
TAGGACCTGGAATGGTTCAGCAAATTCAGTCTGTGTGCATGGAGTGCCAGGGCCATGGGGAGCGGATCAGTCCTAAAGATAGATGTAAAA
GCTGCAACGGAAGGAAGATAGTTCGAGAGAAGAAAATTTTAGAAGTTCATATTGACAAAGGCATGAAAGATGGCCAGAAGATAACATTCC
ATGGTGAAGGAGACCAAGAACCAGGACTGGAGCCAGGCGATATTATCATTGTGTTAGATCAGAAGGACCATGCTGTTTTTACTCGACGAG
GAGAAGACCTTTTCATGTGTATGGACATACAGCTCGTTGAAGCACTGTGTGGCTTCCAGAAGCCAATATCTACTCTTGACAACCGAACCA
TCGTCATCACCTCTCATCCAGGTCAGATTGTCAAGCATGGAGATATCAAGTGTGTACTAAATGAAGGCATGCCAATTTATCGTAGACCAT
ATGAAAAGGGTCGCCTAATCATCGAATTTAAGGTAAACTTTCCTGAGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAAC
TCCTACCCGAGAGGAAGGAAGTGGAAGAGACTGATGAGATGGACCAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCC
ACTACAATGGAGAAGCATATGAGGATGATGAACATCATCCCAGAGGTGGTGTTCAGTGTCAGACCTCTTAATGGGCCAGTGAATAACACT
CACTGCTGGCATTTAATGTGCAGTAGTGAATGAGTGAAGGACTGTAATCATAATATGCTCACTACTTGCTCTTGTTTTTGTTTTAATAAA
CTATAGTAGTGTTTTAAAAAGTTAAATGAAGAATAAACGCAAATATAAAAGCTCTGATTTTGCCCTGTATGTATGATGACTTCAGTGTGC
AAGATGAAGTTTAATACCTGTAAAAACTACAAAGAAGTTCCCCTAGCATTTCTAGGCCAAACCTTGTAATTGACTTCAGCTATGTACGTG
GACAAGCTTAGACTGAAATGCTAGGTATATGTATTGGCTTCAGTGTATGACCCTTCATTGTTAAGCTATGAAAGTAAAACTCTGTATTTA
ACTGGCAATGAGGAAAAAAAAATTTTGTAGAGAAGTGTTGGTCTGTATAGTTCTTTATATTAAGTGGGATTCATTGTAATGCCTCTGCAT
TTATTCTGTTGCCTCAGCTGTTACTTGAAGATGGCGTAATATATAATTTATCCTGTGGTATCAGTGATAAAAATGATACCTTTCTGTAGG
AGGGGTTTATCATAATATGCTGCTTCTTGAAGGCTTGCACTTCCAGAATTGTGTTTCCTTCTGCTGTGCCATTCATATATATATACATAT
ATATATATAATCTTGACCAGTCCTGGTCATTTGCTCCCCTCCTTGTCTGTGGACCATGATAAGCCCAAGTAGTGACTTCAGAGCTGGGTA
ACAGAAATTAAAGTGAAAAGACCTTTACGTGGAGAATTTGCATGCGTAATATAGGAAGGTGTTCTTTAGGTATGTTACAGGATTACTTTA
AACCATTTGACTTTCGCTCCAAAGTTATGTTGGTAGTATAGCAAATTATGATGAATAGCTTTAATTGTATGTTTAAAAGTCTCATATGTT

>59009_59009_6_NFX1-DNAJA1_NFX1_chr9_33290595_ENST00000379540_DNAJA1_chr9_33029883_ENST00000330899_length(amino acids)=306AA_BP=10
MRHGMAEAPPVSGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQ
GHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALC
GFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETDEMDQV

--------------------------------------------------------------
>59009_59009_7_NFX1-DNAJA1_NFX1_chr9_33319125_ENST00000318524_DNAJA1_chr9_33038683_ENST00000330899_length(transcript)=3157nt_BP=1934nt
CAGCTCGATCTAGGTTCTGCGGCACGGGATGGCGGAGGCGCCTCCTGTCTCAGGTACTTTTAAATTCAATACAGATGCTGCTGAATTCAT
TCCTCAGGAGAAAAAAAATTCTGGTCTAAATTGTGGGACTCAAAGGAGACTAGACTCTAATAGGATTGGTAGAAGAAATTACAGTTCACC
ACCTCCCTGTCACCTTTCCAGGCAGGTCCCTTATGATGAAATCTCTGCTGTTCATCAGCATAGTTATCATCCGTCAGGAAGCAAACCTAA
GAGTCAGCAGACGTCTTTCCAGTCCTCTCCTTGTAATAAATCGCCCAAGAGCCATGGCCTTCAGAATCAACCTTGGCAGAAATTGAGGAA
TGAGAAGCACCATATCAGAGTCAAGAAAGCACAGAGTCTTGCTGAGCAGACCTCAGATACAGCTGGATTAGAGAGCTCGACCAGATCAGA
GAGTGGGACAGACCTCAGAGAGCATAGTCCTTCTGAGAGTGAGAAGGAAGTTGTGGGTGCAGATCCCAGGGGAGCAAAACCCAAAAAAGC
AACACAGTTTGTATACAGCTATGGTAGAGGACCAAAAGTCAAGGGGAAACTCAAATGTGAATGGAGTAACCGAACAACTCCAAAACCGGA
GGATGCTGGACCCGAAAGTACCAAACCTGTGGGGGTTTTCCACCCTGACTCTTCAGAGGCATCCTCTAGAAAAGGAGTATTGGATGGGTA
TGGAGCCAGACGAAATGAGCAGAGAAGATACCCACAGAAAAGGCCTCCCTGGGAAGTGGAGGGGGCCAGGCCACGACCAGGCAGAAATCC
ACCAAAACAGGAGGGCCACCGACATACAAACGCAGGACACAGAAACAACATGGGCCCCATTCCAAAGGATGACCTCAATGAAAGACCAGC
AAAATCTACCTGTGACAGTGAGAACTTGGCAGTCATCAACAAGTCTTCCAGGAGGGTTGACCAAGAGAAATGCACTGTACGGAGGCAGGA
TCCTCAAGTAGTATCTCCTTTCTCCCGAGGCAAACAGAACCATGTGCTAAAGAATGTGGAAACGCACACAGGTTCTCTAATTGAACAACT
AACAACAGAAAAATACGAGTGCATGGTGTGCTGTGAATTGGTTCGTGTCACGGCCCCAGTGTGGAGTTGTCAGAGCTGTTACCATGTGTT
TCATTTGAACTGCATAAAGAAATGGGCAAGGTCTCCAGCATCTCAAGCAGATGGCCAGAGTGGTTGGAGGTGCCCTGCCTGTCAGAATGT
TTCTGCACATGTTCCTAATACCTACACTTGTTTCTGTGGCAAGGTAAAGAATCCTGAGTGGAGCAGAAATGAAATTCCACATAGCTGTGG
TGAGGTTTGTAGAAAGAAACAGCCTGGCCAGGACTGCCCACATTCCTGTAACCTTCTCTGCCATCCAGGACCCTGCCCACCCTGCCCTGC
CTTTATGACAAAAACATGTGAATGTGGACGAACCAGGCACACAGTTCGCTGTGGTCAGGCTGTCTCAGTCCACTGTTCTAACCCATGTGA
GAATATTTTGAACTGTGGTCAGCACCAGTGTGCTGAGCTGTGCCATGGGGGTCAGTGCCAGCCTTGCCAGATCATTTTGAACCAGGTATG
CTATTGCGGCAGCACCTCCCGAGATGTGTTATGTGGAACCGATGTAGGAAAGTCTGATGGATTTGGGGATTTCAGCTGTTTAAAGATATG
TGGCAAGGACTTGAAATGCGGTAACCATACATGTTCGCAAGTGTGCCACCCTCAGCCCTGCCAGCAATGCCCACGGCTCCCCCAGCTGGT
GCGCTGTTGCCCCTGTGGCCAAACTCCTCTCAGCCAATTGCTAGAACTTGGAAGTAGTAGTCGGAAAACATGCATGGACCCTGTGCCTTC
ATGTGGAAAAGTGTGCGGCAAGCCTCTGCCTTGTGGTTCCTTAGGTAAACTTTCCTGAGAATGGCTTTCTCTCTCCTGATAAACTGTCTT
TGCTGGAAAAACTCCTACCCGAGAGGAAGGAAGTGGAAGAGACTGATGAGATGGACCAAGTAGAACTGGTGGACTTTGATCCAAATCAGG
AAAGACGGCGCCACTACAATGGAGAAGCATATGAGGATGATGAACATCATCCCAGAGGTGGTGTTCAGTGTCAGACCTCTTAATGGGCCA
GTGAATAACACTCACTGCTGGCATTTAATGTGCAGTAGTGAATGAGTGAAGGACTGTAATCATAATATGCTCACTACTTGCTCTTGTTTT
TGTTTTAATAAACTATAGTAGTGTTTTAAAAAGTTAAATGAAGAATAAACGCAAATATAAAAGCTCTGATTTTGCCCTGTATGTATGATG
ACTTCAGTGTGCAAGATGAAGTTTAATACCTGTAAAAACTACAAAGAAGTTCCCCTAGCATTTCTAGGCCAAACCTTGTAATTGACTTCA
GCTATGTACGTGGACAAGCTTAGACTGAAATGCTAGGTATATGTATTGGCTTCAGTGTATGACCCTTCATTGTTAAGCTATGAAAGTAAA
ACTCTGTATTTAACTGGCAATGAGGAAAAAAAAATTTTGTAGAGAAGTGTTGGTCTGTATAGTTCTTTATATTAAGTGGGATTCATTGTA
ATGCCTCTGCATTTATTCTGTTGCCTCAGCTGTTACTTGAAGATGGCGTAATATATAATTTATCCTGTGGTATCAGTGATAAAAATGATA
CCTTTCTGTAGGAGGGGTTTATCATAATATGCTGCTTCTTGAAGGCTTGCACTTCCAGAATTGTGTTTCCTTCTGCTGTGCCATTCATAT
ATATATACATATATATATATAATCTTGACCAGTCCTGGTCATTTGCTCCCCTCCTTGTCTGTGGACCATGATAAGCCCAAGTAGTGACTT
CAGAGCTGGGTAACAGAAATTAAAGTGAAAAGACCTTTACGTGGAGAATTTGCATGCGTAATATAGGAAGGTGTTCTTTAGGTATGTTAC
AGGATTACTTTAAACCATTTGACTTTCGCTCCAAAGTTATGTTGGTAGTATAGCAAATTATGATGAATAGCTTTAATTGTATGTTTAAAA
GTCTCATATGTTCACATGCTTAAATCTGGGTATCAGAATTTAAGCAATTCTTGAAATGTATTGTCTCCTTAATATACTAATTACAAAGCA

>59009_59009_7_NFX1-DNAJA1_NFX1_chr9_33319125_ENST00000318524_DNAJA1_chr9_33038683_ENST00000330899_length(amino acids)=643AA_BP=
MRHGMAEAPPVSGTFKFNTDAAEFIPQEKKNSGLNCGTQRRLDSNRIGRRNYSSPPPCHLSRQVPYDEISAVHQHSYHPSGSKPKSQQTS
FQSSPCNKSPKSHGLQNQPWQKLRNEKHHIRVKKAQSLAEQTSDTAGLESSTRSESGTDLREHSPSESEKEVVGADPRGAKPKKATQFVY
SYGRGPKVKGKLKCEWSNRTTPKPEDAGPESTKPVGVFHPDSSEASSRKGVLDGYGARRNEQRRYPQKRPPWEVEGARPRPGRNPPKQEG
HRHTNAGHRNNMGPIPKDDLNERPAKSTCDSENLAVINKSSRRVDQEKCTVRRQDPQVVSPFSRGKQNHVLKNVETHTGSLIEQLTTEKY
ECMVCCELVRVTAPVWSCQSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQNVSAHVPNTYTCFCGKVKNPEWSRNEIPHSCGEVCRK
KQPGQDCPHSCNLLCHPGPCPPCPAFMTKTCECGRTRHTVRCGQAVSVHCSNPCENILNCGQHQCAELCHGGQCQPCQIILNQVCYCGST
SRDVLCGTDVGKSDGFGDFSCLKICGKDLKCGNHTCSQVCHPQPCQQCPRLPQLVRCCPCGQTPLSQLLELGSSSRKTCMDPVPSCGKVC

--------------------------------------------------------------
>59009_59009_8_NFX1-DNAJA1_NFX1_chr9_33319125_ENST00000379521_DNAJA1_chr9_33038683_ENST00000330899_length(transcript)=3190nt_BP=1967nt
ACGTGACCTGGTGACAGTGCTGACTTGGCTGTACAGCTCGATCTAGGTTCTGCGGCACGGGATGGCGGAGGCGCCTCCTGTCTCAGGTAC
TTTTAAATTCAATACAGATGCTGCTGAATTCATTCCTCAGGAGAAAAAAAATTCTGGTCTAAATTGTGGGACTCAAAGGAGACTAGACTC
TAATAGGATTGGTAGAAGAAATTACAGTTCACCACCTCCCTGTCACCTTTCCAGGCAGGTCCCTTATGATGAAATCTCTGCTGTTCATCA
GCATAGTTATCATCCGTCAGGAAGCAAACCTAAGAGTCAGCAGACGTCTTTCCAGTCCTCTCCTTGTAATAAATCGCCCAAGAGCCATGG
CCTTCAGAATCAACCTTGGCAGAAATTGAGGAATGAGAAGCACCATATCAGAGTCAAGAAAGCACAGAGTCTTGCTGAGCAGACCTCAGA
TACAGCTGGATTAGAGAGCTCGACCAGATCAGAGAGTGGGACAGACCTCAGAGAGCATAGTCCTTCTGAGAGTGAGAAGGAAGTTGTGGG
TGCAGATCCCAGGGGAGCAAAACCCAAAAAAGCAACACAGTTTGTATACAGCTATGGTAGAGGACCAAAAGTCAAGGGGAAACTCAAATG
TGAATGGAGTAACCGAACAACTCCAAAACCGGAGGATGCTGGACCCGAAAGTACCAAACCTGTGGGGGTTTTCCACCCTGACTCTTCAGA
GGCATCCTCTAGAAAAGGAGTATTGGATGGGTATGGAGCCAGACGAAATGAGCAGAGAAGATACCCACAGAAAAGGCCTCCCTGGGAAGT
GGAGGGGGCCAGGCCACGACCAGGCAGAAATCCACCAAAACAGGAGGGCCACCGACATACAAACGCAGGACACAGAAACAACATGGGCCC
CATTCCAAAGGATGACCTCAATGAAAGACCAGCAAAATCTACCTGTGACAGTGAGAACTTGGCAGTCATCAACAAGTCTTCCAGGAGGGT
TGACCAAGAGAAATGCACTGTACGGAGGCAGGATCCTCAAGTAGTATCTCCTTTCTCCCGAGGCAAACAGAACCATGTGCTAAAGAATGT
GGAAACGCACACAGGTTCTCTAATTGAACAACTAACAACAGAAAAATACGAGTGCATGGTGTGCTGTGAATTGGTTCGTGTCACGGCCCC
AGTGTGGAGTTGTCAGAGCTGTTACCATGTGTTTCATTTGAACTGCATAAAGAAATGGGCAAGGTCTCCAGCATCTCAAGCAGATGGCCA
GAGTGGTTGGAGGTGCCCTGCCTGTCAGAATGTTTCTGCACATGTTCCTAATACCTACACTTGTTTCTGTGGCAAGGTAAAGAATCCTGA
GTGGAGCAGAAATGAAATTCCACATAGCTGTGGTGAGGTTTGTAGAAAGAAACAGCCTGGCCAGGACTGCCCACATTCCTGTAACCTTCT
CTGCCATCCAGGACCCTGCCCACCCTGCCCTGCCTTTATGACAAAAACATGTGAATGTGGACGAACCAGGCACACAGTTCGCTGTGGTCA
GGCTGTCTCAGTCCACTGTTCTAACCCATGTGAGAATATTTTGAACTGTGGTCAGCACCAGTGTGCTGAGCTGTGCCATGGGGGTCAGTG
CCAGCCTTGCCAGATCATTTTGAACCAGGTATGCTATTGCGGCAGCACCTCCCGAGATGTGTTATGTGGAACCGATGTAGGAAAGTCTGA
TGGATTTGGGGATTTCAGCTGTTTAAAGATATGTGGCAAGGACTTGAAATGCGGTAACCATACATGTTCGCAAGTGTGCCACCCTCAGCC
CTGCCAGCAATGCCCACGGCTCCCCCAGCTGGTGCGCTGTTGCCCCTGTGGCCAAACTCCTCTCAGCCAATTGCTAGAACTTGGAAGTAG
TAGTCGGAAAACATGCATGGACCCTGTGCCTTCATGTGGAAAAGTGTGCGGCAAGCCTCTGCCTTGTGGTTCCTTAGGTAAACTTTCCTG
AGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAACTCCTACCCGAGAGGAAGGAAGTGGAAGAGACTGATGAGATGGACC
AAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCCACTACAATGGAGAAGCATATGAGGATGATGAACATCATCCCAGAG
GTGGTGTTCAGTGTCAGACCTCTTAATGGGCCAGTGAATAACACTCACTGCTGGCATTTAATGTGCAGTAGTGAATGAGTGAAGGACTGT
AATCATAATATGCTCACTACTTGCTCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTTTAAAAAGTTAAATGAAGAATAAACGCAAATA
TAAAAGCTCTGATTTTGCCCTGTATGTATGATGACTTCAGTGTGCAAGATGAAGTTTAATACCTGTAAAAACTACAAAGAAGTTCCCCTA
GCATTTCTAGGCCAAACCTTGTAATTGACTTCAGCTATGTACGTGGACAAGCTTAGACTGAAATGCTAGGTATATGTATTGGCTTCAGTG
TATGACCCTTCATTGTTAAGCTATGAAAGTAAAACTCTGTATTTAACTGGCAATGAGGAAAAAAAAATTTTGTAGAGAAGTGTTGGTCTG
TATAGTTCTTTATATTAAGTGGGATTCATTGTAATGCCTCTGCATTTATTCTGTTGCCTCAGCTGTTACTTGAAGATGGCGTAATATATA
ATTTATCCTGTGGTATCAGTGATAAAAATGATACCTTTCTGTAGGAGGGGTTTATCATAATATGCTGCTTCTTGAAGGCTTGCACTTCCA
GAATTGTGTTTCCTTCTGCTGTGCCATTCATATATATATACATATATATATATAATCTTGACCAGTCCTGGTCATTTGCTCCCCTCCTTG
TCTGTGGACCATGATAAGCCCAAGTAGTGACTTCAGAGCTGGGTAACAGAAATTAAAGTGAAAAGACCTTTACGTGGAGAATTTGCATGC
GTAATATAGGAAGGTGTTCTTTAGGTATGTTACAGGATTACTTTAAACCATTTGACTTTCGCTCCAAAGTTATGTTGGTAGTATAGCAAA
TTATGATGAATAGCTTTAATTGTATGTTTAAAAGTCTCATATGTTCACATGCTTAAATCTGGGTATCAGAATTTAAGCAATTCTTGAAAT

>59009_59009_8_NFX1-DNAJA1_NFX1_chr9_33319125_ENST00000379521_DNAJA1_chr9_33038683_ENST00000330899_length(amino acids)=643AA_BP=
MRHGMAEAPPVSGTFKFNTDAAEFIPQEKKNSGLNCGTQRRLDSNRIGRRNYSSPPPCHLSRQVPYDEISAVHQHSYHPSGSKPKSQQTS
FQSSPCNKSPKSHGLQNQPWQKLRNEKHHIRVKKAQSLAEQTSDTAGLESSTRSESGTDLREHSPSESEKEVVGADPRGAKPKKATQFVY
SYGRGPKVKGKLKCEWSNRTTPKPEDAGPESTKPVGVFHPDSSEASSRKGVLDGYGARRNEQRRYPQKRPPWEVEGARPRPGRNPPKQEG
HRHTNAGHRNNMGPIPKDDLNERPAKSTCDSENLAVINKSSRRVDQEKCTVRRQDPQVVSPFSRGKQNHVLKNVETHTGSLIEQLTTEKY
ECMVCCELVRVTAPVWSCQSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQNVSAHVPNTYTCFCGKVKNPEWSRNEIPHSCGEVCRK
KQPGQDCPHSCNLLCHPGPCPPCPAFMTKTCECGRTRHTVRCGQAVSVHCSNPCENILNCGQHQCAELCHGGQCQPCQIILNQVCYCGST
SRDVLCGTDVGKSDGFGDFSCLKICGKDLKCGNHTCSQVCHPQPCQQCPRLPQLVRCCPCGQTPLSQLLELGSSSRKTCMDPVPSCGKVC

--------------------------------------------------------------
>59009_59009_9_NFX1-DNAJA1_NFX1_chr9_33319125_ENST00000379540_DNAJA1_chr9_33038683_ENST00000330899_length(transcript)=3191nt_BP=1968nt
CACGTGACCTGGTGACAGTGCTGACTTGGCTGTACAGCTCGATCTAGGTTCTGCGGCACGGGATGGCGGAGGCGCCTCCTGTCTCAGGTA
CTTTTAAATTCAATACAGATGCTGCTGAATTCATTCCTCAGGAGAAAAAAAATTCTGGTCTAAATTGTGGGACTCAAAGGAGACTAGACT
CTAATAGGATTGGTAGAAGAAATTACAGTTCACCACCTCCCTGTCACCTTTCCAGGCAGGTCCCTTATGATGAAATCTCTGCTGTTCATC
AGCATAGTTATCATCCGTCAGGAAGCAAACCTAAGAGTCAGCAGACGTCTTTCCAGTCCTCTCCTTGTAATAAATCGCCCAAGAGCCATG
GCCTTCAGAATCAACCTTGGCAGAAATTGAGGAATGAGAAGCACCATATCAGAGTCAAGAAAGCACAGAGTCTTGCTGAGCAGACCTCAG
ATACAGCTGGATTAGAGAGCTCGACCAGATCAGAGAGTGGGACAGACCTCAGAGAGCATAGTCCTTCTGAGAGTGAGAAGGAAGTTGTGG
GTGCAGATCCCAGGGGAGCAAAACCCAAAAAAGCAACACAGTTTGTATACAGCTATGGTAGAGGACCAAAAGTCAAGGGGAAACTCAAAT
GTGAATGGAGTAACCGAACAACTCCAAAACCGGAGGATGCTGGACCCGAAAGTACCAAACCTGTGGGGGTTTTCCACCCTGACTCTTCAG
AGGCATCCTCTAGAAAAGGAGTATTGGATGGGTATGGAGCCAGACGAAATGAGCAGAGAAGATACCCACAGAAAAGGCCTCCCTGGGAAG
TGGAGGGGGCCAGGCCACGACCAGGCAGAAATCCACCAAAACAGGAGGGCCACCGACATACAAACGCAGGACACAGAAACAACATGGGCC
CCATTCCAAAGGATGACCTCAATGAAAGACCAGCAAAATCTACCTGTGACAGTGAGAACTTGGCAGTCATCAACAAGTCTTCCAGGAGGG
TTGACCAAGAGAAATGCACTGTACGGAGGCAGGATCCTCAAGTAGTATCTCCTTTCTCCCGAGGCAAACAGAACCATGTGCTAAAGAATG
TGGAAACGCACACAGGTTCTCTAATTGAACAACTAACAACAGAAAAATACGAGTGCATGGTGTGCTGTGAATTGGTTCGTGTCACGGCCC
CAGTGTGGAGTTGTCAGAGCTGTTACCATGTGTTTCATTTGAACTGCATAAAGAAATGGGCAAGGTCTCCAGCATCTCAAGCAGATGGCC
AGAGTGGTTGGAGGTGCCCTGCCTGTCAGAATGTTTCTGCACATGTTCCTAATACCTACACTTGTTTCTGTGGCAAGGTAAAGAATCCTG
AGTGGAGCAGAAATGAAATTCCACATAGCTGTGGTGAGGTTTGTAGAAAGAAACAGCCTGGCCAGGACTGCCCACATTCCTGTAACCTTC
TCTGCCATCCAGGACCCTGCCCACCCTGCCCTGCCTTTATGACAAAAACATGTGAATGTGGACGAACCAGGCACACAGTTCGCTGTGGTC
AGGCTGTCTCAGTCCACTGTTCTAACCCATGTGAGAATATTTTGAACTGTGGTCAGCACCAGTGTGCTGAGCTGTGCCATGGGGGTCAGT
GCCAGCCTTGCCAGATCATTTTGAACCAGGTATGCTATTGCGGCAGCACCTCCCGAGATGTGTTATGTGGAACCGATGTAGGAAAGTCTG
ATGGATTTGGGGATTTCAGCTGTTTAAAGATATGTGGCAAGGACTTGAAATGCGGTAACCATACATGTTCGCAAGTGTGCCACCCTCAGC
CCTGCCAGCAATGCCCACGGCTCCCCCAGCTGGTGCGCTGTTGCCCCTGTGGCCAAACTCCTCTCAGCCAATTGCTAGAACTTGGAAGTA
GTAGTCGGAAAACATGCATGGACCCTGTGCCTTCATGTGGAAAAGTGTGCGGCAAGCCTCTGCCTTGTGGTTCCTTAGGTAAACTTTCCT
GAGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAACTCCTACCCGAGAGGAAGGAAGTGGAAGAGACTGATGAGATGGAC
CAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCCACTACAATGGAGAAGCATATGAGGATGATGAACATCATCCCAGA
GGTGGTGTTCAGTGTCAGACCTCTTAATGGGCCAGTGAATAACACTCACTGCTGGCATTTAATGTGCAGTAGTGAATGAGTGAAGGACTG
TAATCATAATATGCTCACTACTTGCTCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTTTAAAAAGTTAAATGAAGAATAAACGCAAAT
ATAAAAGCTCTGATTTTGCCCTGTATGTATGATGACTTCAGTGTGCAAGATGAAGTTTAATACCTGTAAAAACTACAAAGAAGTTCCCCT
AGCATTTCTAGGCCAAACCTTGTAATTGACTTCAGCTATGTACGTGGACAAGCTTAGACTGAAATGCTAGGTATATGTATTGGCTTCAGT
GTATGACCCTTCATTGTTAAGCTATGAAAGTAAAACTCTGTATTTAACTGGCAATGAGGAAAAAAAAATTTTGTAGAGAAGTGTTGGTCT
GTATAGTTCTTTATATTAAGTGGGATTCATTGTAATGCCTCTGCATTTATTCTGTTGCCTCAGCTGTTACTTGAAGATGGCGTAATATAT
AATTTATCCTGTGGTATCAGTGATAAAAATGATACCTTTCTGTAGGAGGGGTTTATCATAATATGCTGCTTCTTGAAGGCTTGCACTTCC
AGAATTGTGTTTCCTTCTGCTGTGCCATTCATATATATATACATATATATATATAATCTTGACCAGTCCTGGTCATTTGCTCCCCTCCTT
GTCTGTGGACCATGATAAGCCCAAGTAGTGACTTCAGAGCTGGGTAACAGAAATTAAAGTGAAAAGACCTTTACGTGGAGAATTTGCATG
CGTAATATAGGAAGGTGTTCTTTAGGTATGTTACAGGATTACTTTAAACCATTTGACTTTCGCTCCAAAGTTATGTTGGTAGTATAGCAA
ATTATGATGAATAGCTTTAATTGTATGTTTAAAAGTCTCATATGTTCACATGCTTAAATCTGGGTATCAGAATTTAAGCAATTCTTGAAA

>59009_59009_9_NFX1-DNAJA1_NFX1_chr9_33319125_ENST00000379540_DNAJA1_chr9_33038683_ENST00000330899_length(amino acids)=643AA_BP=
MRHGMAEAPPVSGTFKFNTDAAEFIPQEKKNSGLNCGTQRRLDSNRIGRRNYSSPPPCHLSRQVPYDEISAVHQHSYHPSGSKPKSQQTS
FQSSPCNKSPKSHGLQNQPWQKLRNEKHHIRVKKAQSLAEQTSDTAGLESSTRSESGTDLREHSPSESEKEVVGADPRGAKPKKATQFVY
SYGRGPKVKGKLKCEWSNRTTPKPEDAGPESTKPVGVFHPDSSEASSRKGVLDGYGARRNEQRRYPQKRPPWEVEGARPRPGRNPPKQEG
HRHTNAGHRNNMGPIPKDDLNERPAKSTCDSENLAVINKSSRRVDQEKCTVRRQDPQVVSPFSRGKQNHVLKNVETHTGSLIEQLTTEKY
ECMVCCELVRVTAPVWSCQSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQNVSAHVPNTYTCFCGKVKNPEWSRNEIPHSCGEVCRK
KQPGQDCPHSCNLLCHPGPCPPCPAFMTKTCECGRTRHTVRCGQAVSVHCSNPCENILNCGQHQCAELCHGGQCQPCQIILNQVCYCGST
SRDVLCGTDVGKSDGFGDFSCLKICGKDLKCGNHTCSQVCHPQPCQQCPRLPQLVRCCPCGQTPLSQLLELGSSSRKTCMDPVPSCGKVC

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Fusion Gene PPI Analysis for NFX1-DNAJA1


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with
HgeneNFX1chr9:33319125chr9:33038683ENST00000318524+9169_26635.3333333333334834.0PABPC1 and PABC4
HgeneNFX1chr9:33319125chr9:33038683ENST00000379521+9219_26635.33333333333341025.0PABPC1 and PABC4
HgeneNFX1chr9:33319125chr9:33038683ENST00000379540+9249_26635.33333333333341121.0PABPC1 and PABC4


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with
HgeneNFX1chr9:33290595chr9:33029882ENST00000318524+1169_268.333333333333334834.0PABPC1 and PABC4
HgeneNFX1chr9:33290595chr9:33029882ENST00000379521+1219_268.3333333333333341025.0PABPC1 and PABC4
HgeneNFX1chr9:33290595chr9:33029882ENST00000379540+1249_268.3333333333333341121.0PABPC1 and PABC4
HgeneNFX1chr9:33290595chr9:33029883ENST00000318524+1169_268.333333333333334834.0PABPC1 and PABC4
HgeneNFX1chr9:33290595chr9:33029883ENST00000379521+1219_268.3333333333333341025.0PABPC1 and PABC4
HgeneNFX1chr9:33290595chr9:33029883ENST00000379540+1249_268.3333333333333341121.0PABPC1 and PABC4


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for NFX1-DNAJA1


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for NFX1-DNAJA1


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource