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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:NIPAL2-RGS22 (FusionGDB2 ID:59182)

Fusion Gene Summary for NIPAL2-RGS22

check button Fusion gene summary
Fusion gene informationFusion gene name: NIPAL2-RGS22
Fusion gene ID: 59182
HgeneTgene
Gene symbol

NIPAL2

RGS22

Gene ID

79815

26166

Gene nameNIPA like domain containing 2regulator of G protein signaling 22
SynonymsNPAL2CT145|PRTD-NY2
Cytomap

8q22.2

8q22.2

Type of geneprotein-codingprotein-coding
DescriptionNIPA-like protein 2regulator of G-protein signaling 22
Modification date2020031320200320
UniProtAcc

Q9H841

Q8NE09

Ensembl transtripts involved in fusion geneENST00000341166, ENST00000430223, 
ENST00000520545, 
ENST00000519421, 
ENST00000360863, ENST00000523287, 
ENST00000523437, 
Fusion gene scores* DoF score4 X 4 X 4=646 X 7 X 4=168
# samples 67
** MAII scorelog2(6/64*10)=-0.0931094043914815
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(7/168*10)=-1.26303440583379
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: NIPAL2 [Title/Abstract] AND RGS22 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointNIPAL2(99306231)-RGS22(100977658), # samples:3
RGS22(101059691)-NIPAL2(99266315), # samples:1
Anticipated loss of major functional domain due to fusion event.RGS22-NIPAL2 seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across NIPAL2 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across RGS22 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4STADTCGA-VQ-A8DZ-01ANIPAL2chr8

99306231

-RGS22chr8

100977658

-
ChimerDB4STADTCGA-VQ-A8DZNIPAL2chr8

99306230

-RGS22chr8

100977658

-


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Fusion Gene ORF analysis for NIPAL2-RGS22

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-intronENST00000341166ENST00000519421NIPAL2chr8

99306231

-RGS22chr8

100977658

-
5CDS-intronENST00000341166ENST00000519421NIPAL2chr8

99306230

-RGS22chr8

100977658

-
5CDS-intronENST00000430223ENST00000519421NIPAL2chr8

99306231

-RGS22chr8

100977658

-
5CDS-intronENST00000430223ENST00000519421NIPAL2chr8

99306230

-RGS22chr8

100977658

-
In-frameENST00000341166ENST00000360863NIPAL2chr8

99306231

-RGS22chr8

100977658

-
In-frameENST00000341166ENST00000360863NIPAL2chr8

99306230

-RGS22chr8

100977658

-
In-frameENST00000341166ENST00000523287NIPAL2chr8

99306231

-RGS22chr8

100977658

-
In-frameENST00000341166ENST00000523287NIPAL2chr8

99306230

-RGS22chr8

100977658

-
In-frameENST00000341166ENST00000523437NIPAL2chr8

99306231

-RGS22chr8

100977658

-
In-frameENST00000341166ENST00000523437NIPAL2chr8

99306230

-RGS22chr8

100977658

-
In-frameENST00000430223ENST00000360863NIPAL2chr8

99306231

-RGS22chr8

100977658

-
In-frameENST00000430223ENST00000360863NIPAL2chr8

99306230

-RGS22chr8

100977658

-
In-frameENST00000430223ENST00000523287NIPAL2chr8

99306231

-RGS22chr8

100977658

-
In-frameENST00000430223ENST00000523287NIPAL2chr8

99306230

-RGS22chr8

100977658

-
In-frameENST00000430223ENST00000523437NIPAL2chr8

99306231

-RGS22chr8

100977658

-
In-frameENST00000430223ENST00000523437NIPAL2chr8

99306230

-RGS22chr8

100977658

-
intron-3CDSENST00000520545ENST00000360863NIPAL2chr8

99306231

-RGS22chr8

100977658

-
intron-3CDSENST00000520545ENST00000360863NIPAL2chr8

99306230

-RGS22chr8

100977658

-
intron-3CDSENST00000520545ENST00000523287NIPAL2chr8

99306231

-RGS22chr8

100977658

-
intron-3CDSENST00000520545ENST00000523287NIPAL2chr8

99306230

-RGS22chr8

100977658

-
intron-3CDSENST00000520545ENST00000523437NIPAL2chr8

99306231

-RGS22chr8

100977658

-
intron-3CDSENST00000520545ENST00000523437NIPAL2chr8

99306230

-RGS22chr8

100977658

-
intron-intronENST00000520545ENST00000519421NIPAL2chr8

99306231

-RGS22chr8

100977658

-
intron-intronENST00000520545ENST00000519421NIPAL2chr8

99306230

-RGS22chr8

100977658

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000430223NIPAL2chr899306231-ENST00000360863RGS22chr8100977658-91633431609192
ENST00000430223NIPAL2chr899306231-ENST00000523287RGS22chr8100977658-80133431609192
ENST00000430223NIPAL2chr899306231-ENST00000523437RGS22chr8100977658-78533431609192
ENST00000341166NIPAL2chr899306231-ENST00000360863RGS22chr8100977658-97339188666192
ENST00000341166NIPAL2chr899306231-ENST00000523287RGS22chr8100977658-85839188666192
ENST00000341166NIPAL2chr899306231-ENST00000523437RGS22chr8100977658-84239188666192
ENST00000430223NIPAL2chr899306230-ENST00000360863RGS22chr8100977658-91633431609192
ENST00000430223NIPAL2chr899306230-ENST00000523287RGS22chr8100977658-80133431609192
ENST00000430223NIPAL2chr899306230-ENST00000523437RGS22chr8100977658-78533431609192
ENST00000341166NIPAL2chr899306230-ENST00000360863RGS22chr8100977658-97339188666192
ENST00000341166NIPAL2chr899306230-ENST00000523287RGS22chr8100977658-85839188666192
ENST00000341166NIPAL2chr899306230-ENST00000523437RGS22chr8100977658-84239188666192

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000430223ENST00000360863NIPAL2chr899306231-RGS22chr8100977658-0.0124155510.9875844
ENST00000430223ENST00000523287NIPAL2chr899306231-RGS22chr8100977658-0.0176132820.9823867
ENST00000430223ENST00000523437NIPAL2chr899306231-RGS22chr8100977658-0.0158936920.98410636
ENST00000341166ENST00000360863NIPAL2chr899306231-RGS22chr8100977658-0.015076920.9849231
ENST00000341166ENST00000523287NIPAL2chr899306231-RGS22chr8100977658-0.0196846740.9803153
ENST00000341166ENST00000523437NIPAL2chr899306231-RGS22chr8100977658-0.0176463820.98235357
ENST00000430223ENST00000360863NIPAL2chr899306230-RGS22chr8100977658-0.0124155510.9875844
ENST00000430223ENST00000523287NIPAL2chr899306230-RGS22chr8100977658-0.0176132820.9823867
ENST00000430223ENST00000523437NIPAL2chr899306230-RGS22chr8100977658-0.0158936920.98410636
ENST00000341166ENST00000360863NIPAL2chr899306230-RGS22chr8100977658-0.015076920.9849231
ENST00000341166ENST00000523287NIPAL2chr899306230-RGS22chr8100977658-0.0196846740.9803153
ENST00000341166ENST00000523437NIPAL2chr899306230-RGS22chr8100977658-0.0176463820.98235357

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Fusion Genomic Features for NIPAL2-RGS22


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for NIPAL2-RGS22


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr8:99306231/chr8:100977658)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
NIPAL2

Q9H841

RGS22

Q8NE09

FUNCTION: Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneNIPAL2chr8:99306230chr8:100977658ENST00000341166-112110_13045369.0TransmembraneHelical
HgeneNIPAL2chr8:99306230chr8:100977658ENST00000341166-112144_16445369.0TransmembraneHelical
HgeneNIPAL2chr8:99306230chr8:100977658ENST00000341166-112177_19745369.0TransmembraneHelical
HgeneNIPAL2chr8:99306230chr8:100977658ENST00000341166-112209_22945369.0TransmembraneHelical
HgeneNIPAL2chr8:99306230chr8:100977658ENST00000341166-112243_26345369.0TransmembraneHelical
HgeneNIPAL2chr8:99306230chr8:100977658ENST00000341166-112278_29845369.0TransmembraneHelical
HgeneNIPAL2chr8:99306230chr8:100977658ENST00000341166-112306_32645369.0TransmembraneHelical
HgeneNIPAL2chr8:99306230chr8:100977658ENST00000341166-11246_6645369.0TransmembraneHelical
HgeneNIPAL2chr8:99306230chr8:100977658ENST00000341166-11288_10845369.0TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-112110_13045369.0TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-112144_16445369.0TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-112177_19745369.0TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-112209_22945369.0TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-112243_26345369.0TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-112278_29845369.0TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-112306_32645369.0TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-11246_6645369.0TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-11288_10845369.0TransmembraneHelical
TgeneRGS22chr8:99306230chr8:100977658ENST0000036086322281142_117411731285.6666666666667Coiled coilOntology_term=ECO:0000255
TgeneRGS22chr8:99306231chr8:100977658ENST0000036086322281142_117411731285.6666666666667Coiled coilOntology_term=ECO:0000255
TgeneRGS22chr8:99306230chr8:100977658ENST000003608632228267_27711731285.6666666666667Compositional biasNote=Poly-Glu
TgeneRGS22chr8:99306230chr8:100977658ENST000003608632228767_77111731285.6666666666667Compositional biasNote=Poly-Leu
TgeneRGS22chr8:99306231chr8:100977658ENST000003608632228267_27711731285.6666666666667Compositional biasNote=Poly-Glu
TgeneRGS22chr8:99306231chr8:100977658ENST000003608632228767_77111731285.6666666666667Compositional biasNote=Poly-Leu
TgeneRGS22chr8:99306230chr8:100977658ENST0000036086322281021_114511731285.6666666666667DomainRGS 2
TgeneRGS22chr8:99306230chr8:100977658ENST000003608632228852_98011731285.6666666666667DomainRGS 1
TgeneRGS22chr8:99306231chr8:100977658ENST0000036086322281021_114511731285.6666666666667DomainRGS 2
TgeneRGS22chr8:99306231chr8:100977658ENST000003608632228852_98011731285.6666666666667DomainRGS 1


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Fusion Gene Sequence for NIPAL2-RGS22


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>59182_59182_1_NIPAL2-RGS22_NIPAL2_chr8_99306230_ENST00000341166_RGS22_chr8_100977658_ENST00000360863_length(transcript)=973nt_BP=391nt
AGCTGGACGGCCCCGGGAGGCCGCAGACCGCCGGGCTCCCCGAGGACACCTCGCACCGGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCT
GGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTCGCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGC
GGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGAGCGCCGGGAGCGAGACCTCATGGCAGCGGTGGC
GCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTTCACGTACGGGGCACCAGGCGCCGGCAACGGCTC
CCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAAACTGCTTTACTCAG
TGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAACAGGAGAGAATTCT
TCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCTTCAACTATGTCTTT
GAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTTACATCCTGCTGCTGATAGGTTCAAGGAATTCTT
TAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTG
ATTCTGGATTTTCCAGGTGGGAAATAAATAAAGAAAATTTGGCTTGTCTTACTCTCGCAGTTTTAAAATTATAGCTATTCTGTACACATG

>59182_59182_1_NIPAL2-RGS22_NIPAL2_chr8_99306230_ENST00000341166_RGS22_chr8_100977658_ENST00000360863_length(amino acids)=192AA_BP=100
MGAPTAARGREPGGLGAPASPGHRAGSGCGAASSRCNRAGRRPQPEPEPERRERDLMAAVAPAGPGDSASAALDELSLNFTYGAPGAGNG
SLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALEQERILLKIQEELEKKLFAGLQPLTNFKASSSTMS

--------------------------------------------------------------
>59182_59182_2_NIPAL2-RGS22_NIPAL2_chr8_99306230_ENST00000341166_RGS22_chr8_100977658_ENST00000523287_length(transcript)=858nt_BP=391nt
AGCTGGACGGCCCCGGGAGGCCGCAGACCGCCGGGCTCCCCGAGGACACCTCGCACCGGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCT
GGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTCGCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGC
GGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGAGCGCCGGGAGCGAGACCTCATGGCAGCGGTGGC
GCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTTCACGTACGGGGCACCAGGCGCCGGCAACGGCTC
CCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAAACTGCTTTACTCAG
TGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAACAGGAGAGAATTCT
TCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCTTCAACTATGTCTTT
GAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTTACATCCTGCTGCTGATAGGTTCAAGGAATTCTT
TAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTG

>59182_59182_2_NIPAL2-RGS22_NIPAL2_chr8_99306230_ENST00000341166_RGS22_chr8_100977658_ENST00000523287_length(amino acids)=192AA_BP=100
MGAPTAARGREPGGLGAPASPGHRAGSGCGAASSRCNRAGRRPQPEPEPERRERDLMAAVAPAGPGDSASAALDELSLNFTYGAPGAGNG
SLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALEQERILLKIQEELEKKLFAGLQPLTNFKASSSTMS

--------------------------------------------------------------
>59182_59182_3_NIPAL2-RGS22_NIPAL2_chr8_99306230_ENST00000341166_RGS22_chr8_100977658_ENST00000523437_length(transcript)=842nt_BP=391nt
AGCTGGACGGCCCCGGGAGGCCGCAGACCGCCGGGCTCCCCGAGGACACCTCGCACCGGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCT
GGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTCGCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGC
GGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGAGCGCCGGGAGCGAGACCTCATGGCAGCGGTGGC
GCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTTCACGTACGGGGCACCAGGCGCCGGCAACGGCTC
CCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAAACTGCTTTACTCAG
TGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAACAGGAGAGAATTCT
TCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCTTCAACTATGTCTTT
GAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTTACATCCTGCTGCTGATAGGTTCAAGGAATTCTT
TAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTG

>59182_59182_3_NIPAL2-RGS22_NIPAL2_chr8_99306230_ENST00000341166_RGS22_chr8_100977658_ENST00000523437_length(amino acids)=192AA_BP=100
MGAPTAARGREPGGLGAPASPGHRAGSGCGAASSRCNRAGRRPQPEPEPERRERDLMAAVAPAGPGDSASAALDELSLNFTYGAPGAGNG
SLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALEQERILLKIQEELEKKLFAGLQPLTNFKASSSTMS

--------------------------------------------------------------
>59182_59182_4_NIPAL2-RGS22_NIPAL2_chr8_99306230_ENST00000430223_RGS22_chr8_100977658_ENST00000360863_length(transcript)=916nt_BP=334nt
GGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCTGGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTC
GCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGCGGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGA
GCGCCGGGAGCGAGACCTCATGGCAGCGGTGGCGCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTT
CACGTACGGGGCACCAGGCGCCGGCAACGGCTCCCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATAC
TTCAGTGCCTGCTATCAAAACTGCTTTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAA
GTATATAGAAGCCTTAGAACAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCAC
AAATTTTAAGGCTAGCTCTTCAACTATGTCTTTGAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTT
ACATCCTGCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGT
ATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCCAGGTGGGAAATAAATAAAGAAAATTTGGCTTGTCTTACTCTCG
CAGTTTTAAAATTATAGCTATTCTGTACACATGACATACAAGACTATAAGAACTGTTTAACTTATTTAGAATAAAACAACTACTATCTAG

>59182_59182_4_NIPAL2-RGS22_NIPAL2_chr8_99306230_ENST00000430223_RGS22_chr8_100977658_ENST00000360863_length(amino acids)=192AA_BP=100
MGAPTAARGREPGGLGAPASPGHRAGSGCGAASSRCNRAGRRPQPEPEPERRERDLMAAVAPAGPGDSASAALDELSLNFTYGAPGAGNG
SLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALEQERILLKIQEELEKKLFAGLQPLTNFKASSSTMS

--------------------------------------------------------------
>59182_59182_5_NIPAL2-RGS22_NIPAL2_chr8_99306230_ENST00000430223_RGS22_chr8_100977658_ENST00000523287_length(transcript)=801nt_BP=334nt
GGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCTGGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTC
GCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGCGGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGA
GCGCCGGGAGCGAGACCTCATGGCAGCGGTGGCGCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTT
CACGTACGGGGCACCAGGCGCCGGCAACGGCTCCCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATAC
TTCAGTGCCTGCTATCAAAACTGCTTTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAA
GTATATAGAAGCCTTAGAACAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCAC
AAATTTTAAGGCTAGCTCTTCAACTATGTCTTTGAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTT
ACATCCTGCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGT

>59182_59182_5_NIPAL2-RGS22_NIPAL2_chr8_99306230_ENST00000430223_RGS22_chr8_100977658_ENST00000523287_length(amino acids)=192AA_BP=100
MGAPTAARGREPGGLGAPASPGHRAGSGCGAASSRCNRAGRRPQPEPEPERRERDLMAAVAPAGPGDSASAALDELSLNFTYGAPGAGNG
SLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALEQERILLKIQEELEKKLFAGLQPLTNFKASSSTMS

--------------------------------------------------------------
>59182_59182_6_NIPAL2-RGS22_NIPAL2_chr8_99306230_ENST00000430223_RGS22_chr8_100977658_ENST00000523437_length(transcript)=785nt_BP=334nt
GGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCTGGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTC
GCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGCGGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGA
GCGCCGGGAGCGAGACCTCATGGCAGCGGTGGCGCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTT
CACGTACGGGGCACCAGGCGCCGGCAACGGCTCCCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATAC
TTCAGTGCCTGCTATCAAAACTGCTTTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAA
GTATATAGAAGCCTTAGAACAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCAC
AAATTTTAAGGCTAGCTCTTCAACTATGTCTTTGAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTT
ACATCCTGCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGT

>59182_59182_6_NIPAL2-RGS22_NIPAL2_chr8_99306230_ENST00000430223_RGS22_chr8_100977658_ENST00000523437_length(amino acids)=192AA_BP=100
MGAPTAARGREPGGLGAPASPGHRAGSGCGAASSRCNRAGRRPQPEPEPERRERDLMAAVAPAGPGDSASAALDELSLNFTYGAPGAGNG
SLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALEQERILLKIQEELEKKLFAGLQPLTNFKASSSTMS

--------------------------------------------------------------
>59182_59182_7_NIPAL2-RGS22_NIPAL2_chr8_99306231_ENST00000341166_RGS22_chr8_100977658_ENST00000360863_length(transcript)=973nt_BP=391nt
AGCTGGACGGCCCCGGGAGGCCGCAGACCGCCGGGCTCCCCGAGGACACCTCGCACCGGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCT
GGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTCGCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGC
GGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGAGCGCCGGGAGCGAGACCTCATGGCAGCGGTGGC
GCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTTCACGTACGGGGCACCAGGCGCCGGCAACGGCTC
CCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAAACTGCTTTACTCAG
TGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAACAGGAGAGAATTCT
TCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCTTCAACTATGTCTTT
GAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTTACATCCTGCTGCTGATAGGTTCAAGGAATTCTT
TAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTG
ATTCTGGATTTTCCAGGTGGGAAATAAATAAAGAAAATTTGGCTTGTCTTACTCTCGCAGTTTTAAAATTATAGCTATTCTGTACACATG

>59182_59182_7_NIPAL2-RGS22_NIPAL2_chr8_99306231_ENST00000341166_RGS22_chr8_100977658_ENST00000360863_length(amino acids)=192AA_BP=100
MGAPTAARGREPGGLGAPASPGHRAGSGCGAASSRCNRAGRRPQPEPEPERRERDLMAAVAPAGPGDSASAALDELSLNFTYGAPGAGNG
SLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALEQERILLKIQEELEKKLFAGLQPLTNFKASSSTMS

--------------------------------------------------------------
>59182_59182_8_NIPAL2-RGS22_NIPAL2_chr8_99306231_ENST00000341166_RGS22_chr8_100977658_ENST00000523287_length(transcript)=858nt_BP=391nt
AGCTGGACGGCCCCGGGAGGCCGCAGACCGCCGGGCTCCCCGAGGACACCTCGCACCGGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCT
GGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTCGCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGC
GGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGAGCGCCGGGAGCGAGACCTCATGGCAGCGGTGGC
GCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTTCACGTACGGGGCACCAGGCGCCGGCAACGGCTC
CCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAAACTGCTTTACTCAG
TGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAACAGGAGAGAATTCT
TCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCTTCAACTATGTCTTT
GAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTTACATCCTGCTGCTGATAGGTTCAAGGAATTCTT
TAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTG

>59182_59182_8_NIPAL2-RGS22_NIPAL2_chr8_99306231_ENST00000341166_RGS22_chr8_100977658_ENST00000523287_length(amino acids)=192AA_BP=100
MGAPTAARGREPGGLGAPASPGHRAGSGCGAASSRCNRAGRRPQPEPEPERRERDLMAAVAPAGPGDSASAALDELSLNFTYGAPGAGNG
SLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALEQERILLKIQEELEKKLFAGLQPLTNFKASSSTMS

--------------------------------------------------------------
>59182_59182_9_NIPAL2-RGS22_NIPAL2_chr8_99306231_ENST00000341166_RGS22_chr8_100977658_ENST00000523437_length(transcript)=842nt_BP=391nt
AGCTGGACGGCCCCGGGAGGCCGCAGACCGCCGGGCTCCCCGAGGACACCTCGCACCGGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCT
GGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTCGCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGC
GGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGAGCGCCGGGAGCGAGACCTCATGGCAGCGGTGGC
GCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTTCACGTACGGGGCACCAGGCGCCGGCAACGGCTC
CCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAAACTGCTTTACTCAG
TGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAACAGGAGAGAATTCT
TCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCTTCAACTATGTCTTT
GAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTTACATCCTGCTGCTGATAGGTTCAAGGAATTCTT
TAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTG

>59182_59182_9_NIPAL2-RGS22_NIPAL2_chr8_99306231_ENST00000341166_RGS22_chr8_100977658_ENST00000523437_length(amino acids)=192AA_BP=100
MGAPTAARGREPGGLGAPASPGHRAGSGCGAASSRCNRAGRRPQPEPEPERRERDLMAAVAPAGPGDSASAALDELSLNFTYGAPGAGNG
SLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALEQERILLKIQEELEKKLFAGLQPLTNFKASSSTMS

--------------------------------------------------------------
>59182_59182_10_NIPAL2-RGS22_NIPAL2_chr8_99306231_ENST00000430223_RGS22_chr8_100977658_ENST00000360863_length(transcript)=916nt_BP=334nt
GGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCTGGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTC
GCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGCGGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGA
GCGCCGGGAGCGAGACCTCATGGCAGCGGTGGCGCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTT
CACGTACGGGGCACCAGGCGCCGGCAACGGCTCCCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATAC
TTCAGTGCCTGCTATCAAAACTGCTTTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAA
GTATATAGAAGCCTTAGAACAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCAC
AAATTTTAAGGCTAGCTCTTCAACTATGTCTTTGAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTT
ACATCCTGCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGT
ATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCCAGGTGGGAAATAAATAAAGAAAATTTGGCTTGTCTTACTCTCG
CAGTTTTAAAATTATAGCTATTCTGTACACATGACATACAAGACTATAAGAACTGTTTAACTTATTTAGAATAAAACAACTACTATCTAG

>59182_59182_10_NIPAL2-RGS22_NIPAL2_chr8_99306231_ENST00000430223_RGS22_chr8_100977658_ENST00000360863_length(amino acids)=192AA_BP=100
MGAPTAARGREPGGLGAPASPGHRAGSGCGAASSRCNRAGRRPQPEPEPERRERDLMAAVAPAGPGDSASAALDELSLNFTYGAPGAGNG
SLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALEQERILLKIQEELEKKLFAGLQPLTNFKASSSTMS

--------------------------------------------------------------
>59182_59182_11_NIPAL2-RGS22_NIPAL2_chr8_99306231_ENST00000430223_RGS22_chr8_100977658_ENST00000523287_length(transcript)=801nt_BP=334nt
GGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCTGGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTC
GCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGCGGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGA
GCGCCGGGAGCGAGACCTCATGGCAGCGGTGGCGCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTT
CACGTACGGGGCACCAGGCGCCGGCAACGGCTCCCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATAC
TTCAGTGCCTGCTATCAAAACTGCTTTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAA
GTATATAGAAGCCTTAGAACAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCAC
AAATTTTAAGGCTAGCTCTTCAACTATGTCTTTGAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTT
ACATCCTGCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGT

>59182_59182_11_NIPAL2-RGS22_NIPAL2_chr8_99306231_ENST00000430223_RGS22_chr8_100977658_ENST00000523287_length(amino acids)=192AA_BP=100
MGAPTAARGREPGGLGAPASPGHRAGSGCGAASSRCNRAGRRPQPEPEPERRERDLMAAVAPAGPGDSASAALDELSLNFTYGAPGAGNG
SLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALEQERILLKIQEELEKKLFAGLQPLTNFKASSSTMS

--------------------------------------------------------------
>59182_59182_12_NIPAL2-RGS22_NIPAL2_chr8_99306231_ENST00000430223_RGS22_chr8_100977658_ENST00000523437_length(transcript)=785nt_BP=334nt
GGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCTGGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTC
GCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGCGGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGA
GCGCCGGGAGCGAGACCTCATGGCAGCGGTGGCGCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTT
CACGTACGGGGCACCAGGCGCCGGCAACGGCTCCCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATAC
TTCAGTGCCTGCTATCAAAACTGCTTTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAA
GTATATAGAAGCCTTAGAACAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCAC
AAATTTTAAGGCTAGCTCTTCAACTATGTCTTTGAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTT
ACATCCTGCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGT

>59182_59182_12_NIPAL2-RGS22_NIPAL2_chr8_99306231_ENST00000430223_RGS22_chr8_100977658_ENST00000523437_length(amino acids)=192AA_BP=100
MGAPTAARGREPGGLGAPASPGHRAGSGCGAASSRCNRAGRRPQPEPEPERRERDLMAAVAPAGPGDSASAALDELSLNFTYGAPGAGNG
SLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALEQERILLKIQEELEKKLFAGLQPLTNFKASSSTMS

--------------------------------------------------------------

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Fusion Gene PPI Analysis for NIPAL2-RGS22


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for NIPAL2-RGS22


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for NIPAL2-RGS22


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource