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	Fusion Gene Summary
	Fusion Gene ORF analysis
	Fusion Genomic Features
	Fusion Protein Features
	Fusion Gene Sequence
	Fusion Gene PPI analysis
	Related Drugs
	Related Diseases

Fusion gene:PFKFB3-FOSB (FusionGDB2 ID:64432)

Fusion Gene Summary for PFKFB3-FOSB

Fusion gene summary

Fusion gene information	Fusion gene name: PFKFB3-FOSB
	Fusion gene ID: 64432
		Hgene	Tgene
	Gene symbol	PFKFB3	FOSB
	Gene ID	5209	2354
	Gene name	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	FosB proto-oncogene, AP-1 transcription factor subunit
	Synonyms	IPFK2\|PFK2\|iPFK-2	AP-1\|G0S3\|GOS3\|GOSB
	Cytomap	10p15.1	19q13.32
	Type of gene	protein-coding	protein-coding
	Description	6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 36-phosphofructo-2-kinase/ fructose-2,6-bisphosphatase6PF-2-K/Fru-2,6-P2ase 36PF-2-K/Fru-2,6-P2ase brain/placenta-type isozymePFK/FBPase 3fructose-6-phosphate,2-kinase/fructose-2, 6-bisphosphatase	protein fosBFBJ murine osteosarcoma viral oncogene homolog BFosB proto-oncogene, AP-1 trancription factor subunitG0/G1 switch regulatory protein 3activator protein 1
	Modification date	20200329	20200313
	UniProtAcc	.	P53539
	Ensembl transtripts involved in fusion gene	ENST00000379775, ENST00000379789, ENST00000536985, ENST00000317350, ENST00000360521, ENST00000379782, ENST00000379785, ENST00000540253,	ENST00000353609, ENST00000417353, ENST00000443841, ENST00000585836, ENST00000586615, ENST00000591858, ENST00000590335, ENST00000592436, ENST00000592811,
Fusion gene scores	* DoF score	13 X 9 X 7=819	4 X 4 X 2=32
	# samples	13	2
	** MAII score	log2(13/819*10)=-2.65535182861255 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0	log2(2/32*10)=-0.678071905112638 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0
Context	PubMed: PFKFB3 [Title/Abstract] AND FOSB [Title/Abstract] AND fusion [Title/Abstract]
Most frequent breakpoint	PFKFB3(6276796)-FOSB(45978380), # samples:1
Anticipated loss of major functional domain due to fusion event.

* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Partner

Gene

GO ID

GO term

PubMed ID

Fusion gene breakpoints across PFKFB3 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

Fusion gene breakpoints across FOSB (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

Source	Disease	Sample	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
ChiTaRS5.0	N/A	BG926621	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+

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Fusion Gene ORF analysis for PFKFB3-FOSB

Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

ORF	Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
3UTR-3UTR	ENST00000379775	ENST00000353609	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000379775	ENST00000417353	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000379775	ENST00000443841	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000379775	ENST00000585836	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000379775	ENST00000586615	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000379775	ENST00000591858	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000379789	ENST00000353609	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000379789	ENST00000417353	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000379789	ENST00000443841	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000379789	ENST00000585836	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000379789	ENST00000586615	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000379789	ENST00000591858	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000536985	ENST00000353609	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000536985	ENST00000417353	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000536985	ENST00000443841	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000536985	ENST00000585836	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000536985	ENST00000586615	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-3UTR	ENST00000536985	ENST00000591858	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-intron	ENST00000379775	ENST00000590335	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-intron	ENST00000379775	ENST00000592436	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-intron	ENST00000379775	ENST00000592811	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-intron	ENST00000379789	ENST00000590335	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-intron	ENST00000379789	ENST00000592436	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-intron	ENST00000379789	ENST00000592811	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-intron	ENST00000536985	ENST00000590335	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-intron	ENST00000536985	ENST00000592436	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
3UTR-intron	ENST00000536985	ENST00000592811	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000317350	ENST00000353609	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000317350	ENST00000417353	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000317350	ENST00000443841	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000317350	ENST00000585836	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000317350	ENST00000586615	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000317350	ENST00000591858	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000360521	ENST00000353609	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000360521	ENST00000417353	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000360521	ENST00000443841	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000360521	ENST00000585836	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000360521	ENST00000586615	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000360521	ENST00000591858	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000379782	ENST00000353609	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000379782	ENST00000417353	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000379782	ENST00000443841	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000379782	ENST00000585836	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000379782	ENST00000586615	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000379782	ENST00000591858	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000379785	ENST00000353609	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000379785	ENST00000417353	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000379785	ENST00000443841	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000379785	ENST00000585836	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000379785	ENST00000586615	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000379785	ENST00000591858	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000540253	ENST00000353609	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000540253	ENST00000417353	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000540253	ENST00000443841	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000540253	ENST00000585836	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000540253	ENST00000586615	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-3UTR	ENST00000540253	ENST00000591858	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-intron	ENST00000317350	ENST00000590335	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-intron	ENST00000317350	ENST00000592436	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-intron	ENST00000317350	ENST00000592811	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-intron	ENST00000360521	ENST00000590335	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-intron	ENST00000360521	ENST00000592436	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-intron	ENST00000360521	ENST00000592811	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-intron	ENST00000379782	ENST00000590335	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-intron	ENST00000379782	ENST00000592436	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-intron	ENST00000379782	ENST00000592811	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-intron	ENST00000379785	ENST00000590335	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-intron	ENST00000379785	ENST00000592436	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-intron	ENST00000379785	ENST00000592811	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-intron	ENST00000540253	ENST00000590335	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-intron	ENST00000540253	ENST00000592436	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+
intron-intron	ENST00000540253	ENST00000592811	PFKFB3	chr10	6276796	+	FOSB	chr19	45978380	+

ORFfinder result based on the fusion transcript sequence of in-frame fusion genes.

Henst

Tenst

Hgene

Hchr

Hbp

Hstrand

Tgene

Tchr

Tbp

Tstrand

Seq length
(transcript)

BP loci
(transcript)

Predicted start
(transcript)

Predicted stop
(transcript)

Seq length
(amino acids)

DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.

Henst

Tenst

Hgene

Hchr

Hbp

Hstrand

Tgene

Tchr

Tbp

Tstrand

No-coding score

Coding score

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Fusion Genomic Features for PFKFB3-FOSB

FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.

Hgene

Hchr

Hbp

Hstrand

Tgene

Tchr

Tbp

Tstrand

1-p

p (fusion gene breakpoint)

Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for PFKFB3-FOSB

Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/:6276796/:45978380)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.

Main function of each fusion partner protein. (from UniProt)

Hgene	Tgene
.	FOSB P53539
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.	FUNCTION: FosB interacts with Jun proteins enhancing their DNA binding activity.

Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at
download page

* Minus value of BPloci means that the break pointn is located before the CDS.

- In-frame and retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

- In-frame and not-retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

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Fusion Gene Sequence for PFKFB3-FOSB

For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.

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Fusion Gene PPI Analysis for PFKFB3-FOSB

Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in
ChiPPI page.

Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)

Hgene

Hgene's interactors

Tgene

Tgene's interactors

- Retained PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Still interaction with

- Lost PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

- Retained PPIs, but lost function due to frame-shift fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

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Related Drugs for PFKFB3-FOSB

Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)

Partner

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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Related Diseases for PFKFB3-FOSB

Diseases associated with fusion partners.
(DisGeNet 4.0)

Partner

Gene

Disease ID

Disease name

# pubmeds

Source