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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:POLR2A-ASAP2 (FusionGDB2 ID:67000) |
Fusion Gene Summary for POLR2A-ASAP2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: POLR2A-ASAP2 | Fusion gene ID: 67000 | Hgene | Tgene | Gene symbol | POLR2A | ASAP2 | Gene ID | 5430 | 8853 |
Gene name | RNA polymerase II subunit A | ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 | |
Synonyms | NEDHIB|POLR2|POLRA|RPB1|RPBh1|RPO2|RPOL2|RpIILS|hRPB220|hsRPB1 | AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 | |
Cytomap | 17p13.1 | 2p25.1|2p24 | |
Type of gene | protein-coding | protein-coding | |
Description | DNA-directed RNA polymerase II subunit RPB1DNA-directed RNA polymerase II largest subunit, RNA polymerase II 220 kd subunitDNA-directed RNA polymerase II subunit ADNA-directed RNA polymerase III largest subunitRNA polymerase II subunit B1RNA-directed | arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2PYK2 C terminus-associated proteincentaurin, beta 3development and differentiation-enhancing factor 2paxillin-associated protein with ARF GAP activity 3pyk2 C-terminus-associated p | |
Modification date | 20200327 | 20200327 | |
UniProtAcc | . | O43150 | |
Ensembl transtripts involved in fusion gene | ENST00000322644, ENST00000572844, | ENST00000491413, ENST00000281419, ENST00000315273, | |
Fusion gene scores | * DoF score | 12 X 8 X 6=576 | 9 X 10 X 4=360 |
# samples | 13 | 11 | |
** MAII score | log2(13/576*10)=-2.14755718841386 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(11/360*10)=-1.71049338280502 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: POLR2A [Title/Abstract] AND ASAP2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | POLR2A(7388176)-ASAP2(9419446), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | POLR2A | GO:0006366 | transcription by RNA polymerase II | 9852112 |
Hgene | POLR2A | GO:0033120 | positive regulation of RNA splicing | 21536736 |
Fusion gene breakpoints across POLR2A (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across ASAP2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | GBM | TCGA-06-2558-01A | POLR2A | chr17 | 7388176 | + | ASAP2 | chr2 | 9419446 | + |
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Fusion Gene ORF analysis for POLR2A-ASAP2 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000322644 | ENST00000491413 | POLR2A | chr17 | 7388176 | + | ASAP2 | chr2 | 9419446 | + |
5CDS-intron | ENST00000572844 | ENST00000491413 | POLR2A | chr17 | 7388176 | + | ASAP2 | chr2 | 9419446 | + |
In-frame | ENST00000322644 | ENST00000281419 | POLR2A | chr17 | 7388176 | + | ASAP2 | chr2 | 9419446 | + |
In-frame | ENST00000322644 | ENST00000315273 | POLR2A | chr17 | 7388176 | + | ASAP2 | chr2 | 9419446 | + |
In-frame | ENST00000572844 | ENST00000281419 | POLR2A | chr17 | 7388176 | + | ASAP2 | chr2 | 9419446 | + |
In-frame | ENST00000572844 | ENST00000315273 | POLR2A | chr17 | 7388176 | + | ASAP2 | chr2 | 9419446 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000322644 | POLR2A | chr17 | 7388176 | + | ENST00000281419 | ASAP2 | chr2 | 9419446 | + | 5738 | 492 | 369 | 3386 | 1005 |
ENST00000322644 | POLR2A | chr17 | 7388176 | + | ENST00000315273 | ASAP2 | chr2 | 9419446 | + | 5608 | 492 | 369 | 3251 | 960 |
ENST00000572844 | POLR2A | chr17 | 7388176 | + | ENST00000281419 | ASAP2 | chr2 | 9419446 | + | 5484 | 238 | 115 | 3132 | 1005 |
ENST00000572844 | POLR2A | chr17 | 7388176 | + | ENST00000315273 | ASAP2 | chr2 | 9419446 | + | 5354 | 238 | 115 | 2997 | 960 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000322644 | ENST00000281419 | POLR2A | chr17 | 7388176 | + | ASAP2 | chr2 | 9419446 | + | 0.000427717 | 0.99957234 |
ENST00000322644 | ENST00000315273 | POLR2A | chr17 | 7388176 | + | ASAP2 | chr2 | 9419446 | + | 0.000397301 | 0.99960274 |
ENST00000572844 | ENST00000281419 | POLR2A | chr17 | 7388176 | + | ASAP2 | chr2 | 9419446 | + | 0.000390453 | 0.99960953 |
ENST00000572844 | ENST00000315273 | POLR2A | chr17 | 7388176 | + | ASAP2 | chr2 | 9419446 | + | 0.000473854 | 0.99952614 |
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Fusion Genomic Features for POLR2A-ASAP2 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
POLR2A | chr17 | 7388176 | + | ASAP2 | chr2 | 9419445 | + | 0.014039144 | 0.98596084 |
POLR2A | chr17 | 7388176 | + | ASAP2 | chr2 | 9419445 | + | 0.014039144 | 0.98596084 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for POLR2A-ASAP2 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr17:7388176/chr2:9419446) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | ASAP2 |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Activates the small GTPases ARF1, ARF5 and ARF6. Regulates the formation of post-Golgi vesicles and modulates constitutive secretion. Modulates phagocytosis mediated by Fc gamma receptor and ARF6. Modulates PXN recruitment to focal contacts and cell migration. {ECO:0000269|PubMed:10022920, ECO:0000269|PubMed:10749932, ECO:0000269|PubMed:11304556}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000281419 | 0 | 28 | 256_283 | 42 | 1007.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000281419 | 0 | 28 | 729_752 | 42 | 1007.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000315273 | 0 | 27 | 256_283 | 42 | 962.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000315273 | 0 | 27 | 729_752 | 42 | 962.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000281419 | 0 | 28 | 771_936 | 42 | 1007.0 | Compositional bias | Note=Pro-rich | |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000315273 | 0 | 27 | 771_936 | 42 | 962.0 | Compositional bias | Note=Pro-rich | |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000281419 | 0 | 28 | 305_397 | 42 | 1007.0 | Domain | PH | |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000281419 | 0 | 28 | 421_543 | 42 | 1007.0 | Domain | Arf-GAP | |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000281419 | 0 | 28 | 944_1006 | 42 | 1007.0 | Domain | SH3 | |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000315273 | 0 | 27 | 305_397 | 42 | 962.0 | Domain | PH | |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000315273 | 0 | 27 | 421_543 | 42 | 962.0 | Domain | Arf-GAP | |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000315273 | 0 | 27 | 944_1006 | 42 | 962.0 | Domain | SH3 | |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000281419 | 0 | 28 | 584_616 | 42 | 1007.0 | Repeat | Note=ANK 1 | |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000281419 | 0 | 28 | 620_649 | 42 | 1007.0 | Repeat | Note=ANK 2 | |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000315273 | 0 | 27 | 584_616 | 42 | 962.0 | Repeat | Note=ANK 1 | |
Tgene | ASAP2 | chr17:7388176 | chr2:9419446 | ENST00000315273 | 0 | 27 | 620_649 | 42 | 962.0 | Repeat | Note=ANK 2 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1593_1960 | 31 | 1971.0 | Region | Note=C-terminal domain (CTD)%3B 52 X 7 AA approximate tandem repeats of Y-[ST]-P-[STQ]-[ST]-P-[SRTEVKGN] |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 833_845 | 31 | 1971.0 | Region | Note=Bridging helix |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1593_1599 | 31 | 1971.0 | Repeat | Note=1 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1600_1606 | 31 | 1971.0 | Repeat | Note=2%3B approximate |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1608_1614 | 31 | 1971.0 | Repeat | Note=3 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1615_1621 | 31 | 1971.0 | Repeat | Note=4 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1622_1628 | 31 | 1971.0 | Repeat | Note=5 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1629_1635 | 31 | 1971.0 | Repeat | Note=6 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1636_1642 | 31 | 1971.0 | Repeat | Note=7 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1643_1649 | 31 | 1971.0 | Repeat | Note=8 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1650_1656 | 31 | 1971.0 | Repeat | Note=9 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1657_1663 | 31 | 1971.0 | Repeat | Note=10 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1664_1670 | 31 | 1971.0 | Repeat | Note=11 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1671_1677 | 31 | 1971.0 | Repeat | Note=12 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1678_1684 | 31 | 1971.0 | Repeat | Note=13 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1685_1691 | 31 | 1971.0 | Repeat | Note=14 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1692_1698 | 31 | 1971.0 | Repeat | Note=15 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1699_1705 | 31 | 1971.0 | Repeat | Note=16 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1706_1712 | 31 | 1971.0 | Repeat | Note=17 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1713_1719 | 31 | 1971.0 | Repeat | Note=18 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1720_1726 | 31 | 1971.0 | Repeat | Note=19 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1727_1733 | 31 | 1971.0 | Repeat | Note=20 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1734_1740 | 31 | 1971.0 | Repeat | Note=21 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1741_1747 | 31 | 1971.0 | Repeat | Note=22 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1748_1754 | 31 | 1971.0 | Repeat | Note=23 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1755_1761 | 31 | 1971.0 | Repeat | Note=24 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1762_1768 | 31 | 1971.0 | Repeat | Note=25 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1769_1775 | 31 | 1971.0 | Repeat | Note=26 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1776_1782 | 31 | 1971.0 | Repeat | Note=27 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1783_1789 | 31 | 1971.0 | Repeat | Note=28 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1790_1796 | 31 | 1971.0 | Repeat | Note=29 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1797_1803 | 31 | 1971.0 | Repeat | Note=30 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1804_1810 | 31 | 1971.0 | Repeat | Note=31 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1811_1817 | 31 | 1971.0 | Repeat | Note=32 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1818_1824 | 31 | 1971.0 | Repeat | Note=33 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1825_1831 | 31 | 1971.0 | Repeat | Note=34 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1832_1838 | 31 | 1971.0 | Repeat | Note=35 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1839_1845 | 31 | 1971.0 | Repeat | Note=36 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1846_1852 | 31 | 1971.0 | Repeat | Note=37 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1853_1859 | 31 | 1971.0 | Repeat | Note=38 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1860_1866 | 31 | 1971.0 | Repeat | Note=39 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1867_1873 | 31 | 1971.0 | Repeat | Note=40 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1874_1880 | 31 | 1971.0 | Repeat | Note=41 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1881_1887 | 31 | 1971.0 | Repeat | Note=42 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1888_1894 | 31 | 1971.0 | Repeat | Note=43 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1895_1901 | 31 | 1971.0 | Repeat | Note=44 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1902_1908 | 31 | 1971.0 | Repeat | Note=45 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1909_1915 | 31 | 1971.0 | Repeat | Note=46 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1916_1922 | 31 | 1971.0 | Repeat | Note=47 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1923_1929 | 31 | 1971.0 | Repeat | Note=48 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1930_1936 | 31 | 1971.0 | Repeat | Note=49 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1940_1946 | 31 | 1971.0 | Repeat | Note=50 |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1947_1953 | 31 | 1971.0 | Repeat | Note=51%3B approximate |
Hgene | POLR2A | chr17:7388176 | chr2:9419446 | ENST00000322644 | + | 1 | 29 | 1954_1960 | 31 | 1971.0 | Repeat | Note=52%3B approximate |
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Fusion Gene Sequence for POLR2A-ASAP2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>67000_67000_1_POLR2A-ASAP2_POLR2A_chr17_7388176_ENST00000322644_ASAP2_chr2_9419446_ENST00000281419_length(transcript)=5738nt_BP=492nt GCTCAGAAGCGCCGAGAGCGCGGCCGGGACGGTTGGAGAAGAAGGCGGCTCCCGGAAGGGGGAGAGACAAACTGCCGTAACCTCTGCCGT TCAGGAACCCGGTTACTTATTTATTCGTTACCCTTTTTCTTCTTCCTCCCCCAAAAACCTTTTCCTTTTCCCTTCTTTTTTTTTCCTTTT TGGGAGCTGAAAAATTTCCGGTAAGGGAAAGAAGGGCTCCTTTCGCTCCTTATTTCCCCGCCTCCTTCCCTCCCCCACCTTCCCCTCCTC CGGCTTTTTCCTCCCAACTCGGGGAGGTCCTTCCCGGTGGCCGCCCTGACGAGGTCTGAGCACCTAGGCGGAGGCGGCGCAGGCTTTTTG TAGTGAGGTTTGCGCCTGCGCAGCGCGCCTGCCTCCGCCATGCACGGGGGTGGCCCCCCCTCGGGGGACAGCGCATGCCCGCTGCGCACC ATCAAGAGAGTCCAGTTCGGAGTCCTGAGTCCGGATGAACTGGCTTTGGACGTGGACCGGATGGTTCTTTACAAAATGAAGAAATCCGTG AAAGCAATCAACAGCTCTGGGCTGGCTCACGTGGAAAATGAAGAGCAGTACACCCAGGCTCTGGAGAAGTTTGGCGGCAACTGTGTATGC AGAGATGACCCAGATTTAGGAAGTGCGTTCCTGAAGTTCTCAGTGTTTACAAAGGAGTTGACAGCACTTTTCAAAAACCTGATTCAGAAT ATGAACAACATAATCTCCTTCCCTTTGGACAGTTTGCTGAAGGGGGACCTGAAAGGAGTGAAAGGGGATCTGAAAAAGCCTTTTGATAAA GCTTGGAAGGACTATGAAACAAAAATAACCAAGATAGAAAAGGAGAAAAAGGAACACGCCAAGCTCCATGGGATGATTCGGACTGAAATA AGCGGAGCGGAAATTGCCGAAGAGATGGAAAAGGAGAGGCGCTTCTTCCAGCTACAGATGTGCGAGTATCTGCTGAAGGTCAACGAAATC AAGATTAAAAAGGGAGTAGATTTACTTCAGAATCTGATCAAATACTTTCATGCCCAATGCAATTTTTTTCAGGATGGACTCAAAGCCGTG GAAAGCCTCAAACCTTCCATTGAAACGCTGTCTACGGATCTTCACACGATCAAACAGGCCCAGGATGAAGAAAGAAGGCAGTTGATACAG CTTCGAGATATTTTGAAATCCGCATTGCAGGTTGAACAGAAAGAGGACTCCCAAATTCGTCAGAGCACAGCTTATAGCTTACATCAGCCT CAGGGAAACAAGGAACATGGGACCGAGCGGAACGGCAGCCTCTACAAGAAGAGTGACGGGATCCGAAAAGTGTGGCAGAAAAGGAAATGT TCAGTTAAAAATGGTTTTCTGACCATATCCCATGGTACCGCTAACCGGCCTCCTGCAAAGCTCAACCTGCTAACCTGCCAGGTGAAGACC AACCCTGAGGAGAAGAAGTGCTTTGACCTCATTTCACATGACAGAACTTACCACTTTCAAGCTGAAGATGAACAGGAATGTCAAATATGG ATGTCTGTGCTGCAAAATAGCAAAGAAGAAGCTTTAAACAATGCATTTAAGGGGGATGACAATACTGGAGAAAATAACATCGTCCAAGAA CTGACAAAGGAGATCATCTCAGAAGTGCAGAGGATGACGGGCAATGACGTCTGCTGTGACTGTGGGGCGCCAGATCCTACATGGCTTTCC ACCAACCTGGGCATCCTGACCTGCATCGAGTGTTCCGGAATCCACCGAGAGCTGGGGGTTCATTATTCCAGGATGCAGTCCCTGACCTTA GATGTACTGGGAACATCTGAGCTGCTGCTCGCCAAGAATATTGGGAATGCAGGCTTTAATGAGATCATGGAATGTTGCCTACCAGCTGAG GACTCAGTCAAACCCAACCCAGGCAGCGACATGAATGCAAGAAAGGACTACATCACAGCCAAGTACATCGAGAGGAGATACGCAAGGAAG AAGCACGCGGATAACGCGGCGAAGCTTCACAGTCTTTGCGAGGCCGTCAAAACGAGAGATATTTTTGGATTGCTCCAAGCTTATGCTGAT GGTGTGGATCTTACGGAAAAAATCCCACTGGCCAACGGACATGAGCCGGATGAAACGGCCCTCCACCTTGCAGTCAGATCCGTGGATCGA ACCTCTCTTCACATTGTAGACTTTTTAGTTCAGAACAGTGGGAACCTGGATAAACAGACAGGGAAAGGCAGCACAGCCCTGCACTACTGC TGCCTGACCGACAATGCCGAGTGCCTCAAGTTGCTCCTGCGGGGGAAGGCCTCCATCGAGATAGCAAACGAGTCAGGAGAGACTCCGCTG GACATTGCCAAGCGCCTCAAGCACGAGCACTGTGAGGAGCTGCTGACCCAAGCCTTATCTGGAAGATTTAATTCTCACGTTCACGTTGAA TATGAATGGCGACTACTCCACGAAGACCTGGATGAAAGTGATGACGACATGGATGAGAAATTGCAGCCCAGTCCCAACCGGCGGGAAGAC CGGCCCATCAGCTTCTACCAGCTGGGCTCCAACCAGCTTCAGTCTAACGCTGTATCTTTGGCCAGAGATGCTGCAAACCTTGCCAAGGAG AAGCAGAGGGCTTTCATGCCCAGCATCTTGCAGAATGAGACTTACGGAGCCCTCCTGAGTGGCAGCCCACCTCCCGCCCAGCCTGCAGCC CCCAGCACCACCAGCGCCCCCCCGCTTCCTCCACGGAATGTTGGCAAAGTTCAGACAGCCTCCTCTGCTAACACCCTGTGGAAGACAAAC TCTGTAAGTGTGGACGGTGGAAGCCGGCAGCGATCTTCGTCAGATCCGCCAGCTGTCCATCCACCGCTGCCCCCTCTTCGCGTGACATCT ACCAATCCCCTGACCCCCACGCCGCCCCCACCCGTTGCCAAGACGCCCAGCGTAATGGAAGCCTTGAGCCAGCCGAGCAAGCCTGCCCCG CCTGGGATCTCACAGATCAGGCCCCCACCTCTGCCCCCACAGCCGCCCAGCCGCCTCCCGCAGAAGAAGCCTGCGCCGGGGGCTGACAAG TCCACCCCACTGACCAACAAAGGCCAACCGAGAGGACCTGTGGATCTCTCTGCAACGGAAGCTCTGGGTCCTCTGTCCAATGCTATGGTC CTGCAGCCCCCTGCACCCATGCCTAGGAAGTCGCAGGCAACCAAGTTGAAGCCTAAGCGGGTGAAAGCGCTCTATAACTGTGTGGCTGAC AACCCCGATGAGCTCACCTTCTCCGAGGGGGATGTGATCATCGTGGACGGGGAGGAGGACCAGGAGTGGTGGATTGGCCACATTGATGGA GATCCTGGTCGCAAAGGCGCATTCCCGGTGTCATTTGTGCACTTTATCGCTGACTGAATTGCTACTGAACAAAAGCATTAACAGTTATGT TCCTGTTTCGTTATTGGTACCAAAACTCTTGCCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCCACTGC TCTGTTTTAAAAACTCAGAGGCAATTTTTACATATCAGTAATTGTTTTTATAATTTGTGGTTTTCATGAAACATTGCTATGCATTTATTA GGAAAAACTGAATTTCCCAACAGGTGAACTGAAAAGTTATTTTAACTATTATACATAATCAAGATCCTGCCTCTACGGAATTAGCTAAAC CTAAAAATGTTTGCATTAATGAATAAATTCTTCCTGCATTCCTTGGCCCAGTTCTGGAGTTGGTGACCTTTATCACAATTATTATTTTAG GCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCTCGATAAAATGCCATCAGTTCACCTTTAAAGACACACAT TCCTTTGAAATCCACCCAGTGTTTAAAAAGCAACTTGGAAATTTACACATTAGCATTGTACTTTCTAGCCCTAATTTGTGAGGTTGCAGC TATCATTATATTCTGCATGTATGTATAACCTGTTGTGAACAATCATACTTAACAAAACTACTGATGGTTTATGACAACGTAGGGTAACTA CAGTTCATTCTGTTCCAGGTTATATAAAACTGCATTTCCTGAATTTGGTTAAAAACTAAGGATGATGGATTGCAAAACAGTTCTTTTAAA TTAGTTTATATGCTTTAGGTGTTTTGGAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGG CGCAGACCATGCTGTATTAACACATCACTTGCTGTTTCCTACTGAGTGTACCACTGCCTTCCCTTCTAGCCCAGGAGAATGTTTACTCAG TTTAGTGTCTTGTATTTCTATAATACTCCAACAGGAATGGTAGTCACACTGTCTTGAAATTGAATCTGTCCATCTGTTTATAATCAAGAA CATATCAGAAATATATAGGTCCCAGGTAATACTCCCAAACATCCCACTTTTTACTGTTTCAGGCCATCATATCATTCTTAAGCTACTTGG GGTGGTAGTAGAGGATTAGGTTGTCTATTATAAAACCAAAACTCATTCGTTTAATGAACTTGACTGTCATACCTCTATTTAGTAATTGCG AGGGTAAGATTCATAGTAGGAATATTGGAAATTTTGGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGTA AAGGAATAAATTTGCATATAGGCTTGGAAAGTGAGGCAGCAATGCTGTTAACTGCATTTGTTGTGATGGTGCATTTGATTGAAGCAGCTT GTCTTTATTATGCAAGACTGTGTAGAGTTTTTTTTTTTTTTGGCATTGTACTTTTTGTTTTTGTTATAAAGGAAGACAGAACAAACTGGA ATGTTTTATGATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTTATATCTGTAGTTTTTTGTTTTTGTTTT TTTTTAAAGCACTACATCTGTTTTCACTAATTGTTAATTTCTGTTTGAACCCTTCATTTAATTTTCTCATAGATTTAAGTAAACAGATGT ATTTTGCACAGTGCACTTATGTCTATTTTAACAATCCTCCTGCATCTGTATTTTATAGTCAGCCTTTTGACCACCTGGTGCCAGCTATAT AAGGAATAAAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTCACTGGTACATAAATACCTAGGAAATATT TTTCCAGTCTACAATTTGGTGCTATTGTGCAGTAACTAATAGTACTCTTACCAGAGGAGAAATTATATTAACGACCCTGCTAATATCCTT TCTTAGTTATTTGCTCCTTGCAAATTAAAAAAGCAACTAAGAGAAAGAAAAACATTGTAGATATCTATTTATATTTAAAGTTTATGTTTC ATGAACTGCAGCTGCAGGATTCTGGCATTTTGCATGCCATTCTCCATCAGATCTGGGATGATGGCTCAGAACATGTACACAGACTAAGAG TAACTGTGTGATCTGTTAAGGGGTGGATAACATAATATGCAGCTTAGGATGCTATTTTGAGATGTATGATATTCAGTTCATTCACCTGAT TACTTTGGTTGCAGCACAACTGTATATATTGTATAACCGAAATTGATTATTTTCATTGTCCTTAATGCAGTGATTTATAATTAGAGCATG >67000_67000_1_POLR2A-ASAP2_POLR2A_chr17_7388176_ENST00000322644_ASAP2_chr2_9419446_ENST00000281419_length(amino acids)=1005AA_BP=36 MRLRSAPASAMHGGGPPSGDSACPLRTIKRVQFGVLSPDELALDVDRMVLYKMKKSVKAINSSGLAHVENEEQYTQALEKFGGNCVCRDD PDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLKGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGA EIAEEMEKERRFFQLQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLHTIKQAQDEERRQLIQLRD ILKSALQVEQKEDSQIRQSTAYSLHQPQGNKEHGTERNGSLYKKSDGIRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKTNPE EKKCFDLISHDRTYHFQAEDEQECQIWMSVLQNSKEEALNNAFKGDDNTGENNIVQELTKEIISEVQRMTGNDVCCDCGAPDPTWLSTNL GILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPAEDSVKPNPGSDMNARKDYITAKYIERRYARKKHA DNAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLT DNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVEYEWRLLHEDLDESDDDMDEKLQPSPNRREDRPI SFYQLGSNQLQSNAVSLARDAANLAKEKQRAFMPSILQNETYGALLSGSPPPAQPAAPSTTSAPPLPPRNVGKVQTASSANTLWKTNSVS VDGGSRQRSSSDPPAVHPPLPPLRVTSTNPLTPTPPPPVAKTPSVMEALSQPSKPAPPGISQIRPPPLPPQPPSRLPQKKPAPGADKSTP LTNKGQPRGPVDLSATEALGPLSNAMVLQPPAPMPRKSQATKLKPKRVKALYNCVADNPDELTFSEGDVIIVDGEEDQEWWIGHIDGDPG -------------------------------------------------------------- >67000_67000_2_POLR2A-ASAP2_POLR2A_chr17_7388176_ENST00000322644_ASAP2_chr2_9419446_ENST00000315273_length(transcript)=5608nt_BP=492nt GCTCAGAAGCGCCGAGAGCGCGGCCGGGACGGTTGGAGAAGAAGGCGGCTCCCGGAAGGGGGAGAGACAAACTGCCGTAACCTCTGCCGT TCAGGAACCCGGTTACTTATTTATTCGTTACCCTTTTTCTTCTTCCTCCCCCAAAAACCTTTTCCTTTTCCCTTCTTTTTTTTTCCTTTT TGGGAGCTGAAAAATTTCCGGTAAGGGAAAGAAGGGCTCCTTTCGCTCCTTATTTCCCCGCCTCCTTCCCTCCCCCACCTTCCCCTCCTC CGGCTTTTTCCTCCCAACTCGGGGAGGTCCTTCCCGGTGGCCGCCCTGACGAGGTCTGAGCACCTAGGCGGAGGCGGCGCAGGCTTTTTG TAGTGAGGTTTGCGCCTGCGCAGCGCGCCTGCCTCCGCCATGCACGGGGGTGGCCCCCCCTCGGGGGACAGCGCATGCCCGCTGCGCACC ATCAAGAGAGTCCAGTTCGGAGTCCTGAGTCCGGATGAACTGGCTTTGGACGTGGACCGGATGGTTCTTTACAAAATGAAGAAATCCGTG AAAGCAATCAACAGCTCTGGGCTGGCTCACGTGGAAAATGAAGAGCAGTACACCCAGGCTCTGGAGAAGTTTGGCGGCAACTGTGTATGC AGAGATGACCCAGATTTAGGAAGTGCGTTCCTGAAGTTCTCAGTGTTTACAAAGGAGTTGACAGCACTTTTCAAAAACCTGATTCAGAAT ATGAACAACATAATCTCCTTCCCTTTGGACAGTTTGCTGAAGGGGGACCTGAAAGGAGTGAAAGGGGATCTGAAAAAGCCTTTTGATAAA GCTTGGAAGGACTATGAAACAAAAATAACCAAGATAGAAAAGGAGAAAAAGGAACACGCCAAGCTCCATGGGATGATTCGGACTGAAATA AGCGGAGCGGAAATTGCCGAAGAGATGGAAAAGGAGAGGCGCTTCTTCCAGCTACAGATGTGCGAGTATCTGCTGAAGGTCAACGAAATC AAGATTAAAAAGGGAGTAGATTTACTTCAGAATCTGATCAAATACTTTCATGCCCAATGCAATTTTTTTCAGGATGGACTCAAAGCCGTG GAAAGCCTCAAACCTTCCATTGAAACGCTGTCTACGGATCTTCACACGATCAAACAGGCCCAGGATGAAGAAAGAAGGCAGTTGATACAG CTTCGAGATATTTTGAAATCCGCATTGCAGGTTGAACAGAAAGAGGACTCCCAAATTCGTCAGAGCACAGCTTATAGCTTACATCAGCCT CAGGGAAACAAGGAACATGGGACCGAGCGGAACGGCAGCCTCTACAAGAAGAGTGACGGGATCCGAAAAGTGTGGCAGAAAAGGAAATGT TCAGTTAAAAATGGTTTTCTGACCATATCCCATGGTACCGCTAACCGGCCTCCTGCAAAGCTCAACCTGCTAACCTGCCAGGTGAAGACC AACCCTGAGGAGAAGAAGTGCTTTGACCTCATTTCACATGACAGAACTTACCACTTTCAAGCTGAAGATGAACAGGAATGTCAAATATGG ATGTCTGTGCTGCAAAATAGCAAAGAAGAAGCTTTAAACAATGCATTTAAGGGGGATGACAATACTGGAGAAAATAACATCGTCCAAGAA CTGACAAAGGAGATCATCTCAGAAGTGCAGAGGATGACGGGCAATGACGTCTGCTGTGACTGTGGGGCGCCAGATCCTACATGGCTTTCC ACCAACCTGGGCATCCTGACCTGCATCGAGTGTTCCGGAATCCACCGAGAGCTGGGGGTTCATTATTCCAGGATGCAGTCCCTGACCTTA GATGTACTGGGAACATCTGAGCTGCTGCTCGCCAAGAATATTGGGAATGCAGGCTTTAATGAGATCATGGAATGTTGCCTACCAGCTGAG GACTCAGTCAAACCCAACCCAGGCAGCGACATGAATGCAAGAAAGGACTACATCACAGCCAAGTACATCGAGAGGAGATACGCAAGGAAG AAGCACGCGGATAACGCGGCGAAGCTTCACAGTCTTTGCGAGGCCGTCAAAACGAGAGATATTTTTGGATTGCTCCAAGCTTATGCTGAT GGTGTGGATCTTACGGAAAAAATCCCACTGGCCAACGGACATGAGCCGGATGAAACGGCCCTCCACCTTGCAGTCAGATCCGTGGATCGA ACCTCTCTTCACATTGTAGACTTTTTAGTTCAGAACAGTGGGAACCTGGATAAACAGACAGGGAAAGGCAGCACAGCCCTGCACTACTGC TGCCTGACCGACAATGCCGAGTGCCTCAAGTTGCTCCTGCGGGGGAAGGCCTCCATCGAGATAGCAAACGAGTCAGGAGAGACTCCGCTG GACATTGCCAAGCGCCTCAAGCACGAGCACTGTGAGGAGCTGCTGACCCAAGCCTTATCTGGAAGATTTAATTCTCACGTTCACGTTGAA TATGAATGGCGACTACTCCACGAAGACCTGGATGAAAGTGATGACGACATGGATGAGAAATTGCAGCCCAGTCCCAACCGGCGGGAAGAC CGGCCCATCAGCTTCTACCAGCTGGGCTCCAACCAGCTTCAGTCTAACGCTGTATCTTTGGCCAGAGATGCTGCAAACCTTGCCAAGGAG AAGCAGAGGGCTTTCATGCCCAGCATCTTGCAGAATGAGACTTACGGAGCCCTCCTGAGTGGCAGCCCACCTCCCGCCCAGCCTGCAGCC CCCAGCACCACCAGCGCCCCCCCGCTTCCTCCACGGAATGTTGGCAAAGATCCCCTGACCCCCACGCCGCCCCCACCCGTTGCCAAGACG CCCAGCGTAATGGAAGCCTTGAGCCAGCCGAGCAAGCCTGCCCCGCCTGGGATCTCACAGATCAGGCCCCCACCTCTGCCCCCACAGCCG CCCAGCCGCCTCCCGCAGAAGAAGCCTGCGCCGGGGGCTGACAAGTCCACCCCACTGACCAACAAAGGCCAACCGAGAGGACCTGTGGAT CTCTCTGCAACGGAAGCTCTGGGTCCTCTGTCCAATGCTATGGTCCTGCAGCCCCCTGCACCCATGCCTAGGAAGTCGCAGGCAACCAAG TTGAAGCCTAAGCGGGTGAAAGCGCTCTATAACTGTGTGGCTGACAACCCCGATGAGCTCACCTTCTCCGAGGGGGATGTGATCATCGTG GACGGGGAGGAGGACCAGGAGTGGTGGATTGGCCACATTGATGGAGATCCTGGTCGCAAAGGCGCATTCCCGGTGTCATTTGTGCACTTT ATCGCTGACTGAATTGCTACTGAACAAAAGCATTAACAGTTATGTTCCTGTTTCGTTATTGGTACCAAAACTCTTGCCAGATAACCAGTT TCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCCACTGCTCTGTTTTAAAAACTCAGAGGCAATTTTTACATATCAGTAATTGT TTTTATAATTTGTGGTTTTCATGAAACATTGCTATGCATTTATTAGGAAAAACTGAATTTCCCAACAGGTGAACTGAAAAGTTATTTTAA CTATTATACATAATCAAGATCCTGCCTCTACGGAATTAGCTAAACCTAAAAATGTTTGCATTAATGAATAAATTCTTCCTGCATTCCTTG GCCCAGTTCTGGAGTTGGTGACCTTTATCACAATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGA ACTTTCTCGATAAAATGCCATCAGTTCACCTTTAAAGACACACATTCCTTTGAAATCCACCCAGTGTTTAAAAAGCAACTTGGAAATTTA CACATTAGCATTGTACTTTCTAGCCCTAATTTGTGAGGTTGCAGCTATCATTATATTCTGCATGTATGTATAACCTGTTGTGAACAATCA TACTTAACAAAACTACTGATGGTTTATGACAACGTAGGGTAACTACAGTTCATTCTGTTCCAGGTTATATAAAACTGCATTTCCTGAATT TGGTTAAAAACTAAGGATGATGGATTGCAAAACAGTTCTTTTAAATTAGTTTATATGCTTTAGGTGTTTTGGAATTTGCCTTCTTGAACT TCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATCACTTGCTGTTTCCTACTGA GTGTACCACTGCCTTCCCTTCTAGCCCAGGAGAATGTTTACTCAGTTTAGTGTCTTGTATTTCTATAATACTCCAACAGGAATGGTAGTC ACACTGTCTTGAAATTGAATCTGTCCATCTGTTTATAATCAAGAACATATCAGAAATATATAGGTCCCAGGTAATACTCCCAAACATCCC ACTTTTTACTGTTTCAGGCCATCATATCATTCTTAAGCTACTTGGGGTGGTAGTAGAGGATTAGGTTGTCTATTATAAAACCAAAACTCA TTCGTTTAATGAACTTGACTGTCATACCTCTATTTAGTAATTGCGAGGGTAAGATTCATAGTAGGAATATTGGAAATTTTGGCACTCTGA GAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGTAAAGGAATAAATTTGCATATAGGCTTGGAAAGTGAGGCAGCAATGC TGTTAACTGCATTTGTTGTGATGGTGCATTTGATTGAAGCAGCTTGTCTTTATTATGCAAGACTGTGTAGAGTTTTTTTTTTTTTTGGCA TTGTACTTTTTGTTTTTGTTATAAAGGAAGACAGAACAAACTGGAATGTTTTATGATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGT TCCGGGTAAAAATGTGTTATATCTGTAGTTTTTTGTTTTTGTTTTTTTTTAAAGCACTACATCTGTTTTCACTAATTGTTAATTTCTGTT TGAACCCTTCATTTAATTTTCTCATAGATTTAAGTAAACAGATGTATTTTGCACAGTGCACTTATGTCTATTTTAACAATCCTCCTGCAT CTGTATTTTATAGTCAGCCTTTTGACCACCTGGTGCCAGCTATATAAGGAATAAAGTTGATTCATATCAACATTAGAACTCCAGTCCCAA ACTAATCTGTCAGGTTCACTGGTACATAAATACCTAGGAAATATTTTTCCAGTCTACAATTTGGTGCTATTGTGCAGTAACTAATAGTAC TCTTACCAGAGGAGAAATTATATTAACGACCCTGCTAATATCCTTTCTTAGTTATTTGCTCCTTGCAAATTAAAAAAGCAACTAAGAGAA AGAAAAACATTGTAGATATCTATTTATATTTAAAGTTTATGTTTCATGAACTGCAGCTGCAGGATTCTGGCATTTTGCATGCCATTCTCC ATCAGATCTGGGATGATGGCTCAGAACATGTACACAGACTAAGAGTAACTGTGTGATCTGTTAAGGGGTGGATAACATAATATGCAGCTT AGGATGCTATTTTGAGATGTATGATATTCAGTTCATTCACCTGATTACTTTGGTTGCAGCACAACTGTATATATTGTATAACCGAAATTG ATTATTTTCATTGTCCTTAATGCAGTGATTTATAATTAGAGCATGTTTAATAAGTTTACTCTTCTTGTTAACTAGTCATTTGACTGGAAA >67000_67000_2_POLR2A-ASAP2_POLR2A_chr17_7388176_ENST00000322644_ASAP2_chr2_9419446_ENST00000315273_length(amino acids)=960AA_BP=36 MRLRSAPASAMHGGGPPSGDSACPLRTIKRVQFGVLSPDELALDVDRMVLYKMKKSVKAINSSGLAHVENEEQYTQALEKFGGNCVCRDD PDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLKGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGA EIAEEMEKERRFFQLQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLHTIKQAQDEERRQLIQLRD ILKSALQVEQKEDSQIRQSTAYSLHQPQGNKEHGTERNGSLYKKSDGIRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKTNPE EKKCFDLISHDRTYHFQAEDEQECQIWMSVLQNSKEEALNNAFKGDDNTGENNIVQELTKEIISEVQRMTGNDVCCDCGAPDPTWLSTNL GILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPAEDSVKPNPGSDMNARKDYITAKYIERRYARKKHA DNAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLT DNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVEYEWRLLHEDLDESDDDMDEKLQPSPNRREDRPI SFYQLGSNQLQSNAVSLARDAANLAKEKQRAFMPSILQNETYGALLSGSPPPAQPAAPSTTSAPPLPPRNVGKDPLTPTPPPPVAKTPSV MEALSQPSKPAPPGISQIRPPPLPPQPPSRLPQKKPAPGADKSTPLTNKGQPRGPVDLSATEALGPLSNAMVLQPPAPMPRKSQATKLKP -------------------------------------------------------------- >67000_67000_3_POLR2A-ASAP2_POLR2A_chr17_7388176_ENST00000572844_ASAP2_chr2_9419446_ENST00000281419_length(transcript)=5484nt_BP=238nt CCACCTTCCCCTCCTCCGGCTTTTTCCTCCCAACTCGGGGAGGTCCTTCCCGGTGGCCGCCCTGACGAGGTCTGAGCACCTAGGCGGAGG CGGCGCAGGCTTTTTGTAGTGAGGTTTGCGCCTGCGCAGCGCGCCTGCCTCCGCCATGCACGGGGGTGGCCCCCCCTCGGGGGACAGCGC ATGCCCGCTGCGCACCATCAAGAGAGTCCAGTTCGGAGTCCTGAGTCCGGATGAACTGGCTTTGGACGTGGACCGGATGGTTCTTTACAA AATGAAGAAATCCGTGAAAGCAATCAACAGCTCTGGGCTGGCTCACGTGGAAAATGAAGAGCAGTACACCCAGGCTCTGGAGAAGTTTGG CGGCAACTGTGTATGCAGAGATGACCCAGATTTAGGAAGTGCGTTCCTGAAGTTCTCAGTGTTTACAAAGGAGTTGACAGCACTTTTCAA AAACCTGATTCAGAATATGAACAACATAATCTCCTTCCCTTTGGACAGTTTGCTGAAGGGGGACCTGAAAGGAGTGAAAGGGGATCTGAA AAAGCCTTTTGATAAAGCTTGGAAGGACTATGAAACAAAAATAACCAAGATAGAAAAGGAGAAAAAGGAACACGCCAAGCTCCATGGGAT GATTCGGACTGAAATAAGCGGAGCGGAAATTGCCGAAGAGATGGAAAAGGAGAGGCGCTTCTTCCAGCTACAGATGTGCGAGTATCTGCT GAAGGTCAACGAAATCAAGATTAAAAAGGGAGTAGATTTACTTCAGAATCTGATCAAATACTTTCATGCCCAATGCAATTTTTTTCAGGA TGGACTCAAAGCCGTGGAAAGCCTCAAACCTTCCATTGAAACGCTGTCTACGGATCTTCACACGATCAAACAGGCCCAGGATGAAGAAAG AAGGCAGTTGATACAGCTTCGAGATATTTTGAAATCCGCATTGCAGGTTGAACAGAAAGAGGACTCCCAAATTCGTCAGAGCACAGCTTA TAGCTTACATCAGCCTCAGGGAAACAAGGAACATGGGACCGAGCGGAACGGCAGCCTCTACAAGAAGAGTGACGGGATCCGAAAAGTGTG GCAGAAAAGGAAATGTTCAGTTAAAAATGGTTTTCTGACCATATCCCATGGTACCGCTAACCGGCCTCCTGCAAAGCTCAACCTGCTAAC CTGCCAGGTGAAGACCAACCCTGAGGAGAAGAAGTGCTTTGACCTCATTTCACATGACAGAACTTACCACTTTCAAGCTGAAGATGAACA GGAATGTCAAATATGGATGTCTGTGCTGCAAAATAGCAAAGAAGAAGCTTTAAACAATGCATTTAAGGGGGATGACAATACTGGAGAAAA TAACATCGTCCAAGAACTGACAAAGGAGATCATCTCAGAAGTGCAGAGGATGACGGGCAATGACGTCTGCTGTGACTGTGGGGCGCCAGA TCCTACATGGCTTTCCACCAACCTGGGCATCCTGACCTGCATCGAGTGTTCCGGAATCCACCGAGAGCTGGGGGTTCATTATTCCAGGAT GCAGTCCCTGACCTTAGATGTACTGGGAACATCTGAGCTGCTGCTCGCCAAGAATATTGGGAATGCAGGCTTTAATGAGATCATGGAATG TTGCCTACCAGCTGAGGACTCAGTCAAACCCAACCCAGGCAGCGACATGAATGCAAGAAAGGACTACATCACAGCCAAGTACATCGAGAG GAGATACGCAAGGAAGAAGCACGCGGATAACGCGGCGAAGCTTCACAGTCTTTGCGAGGCCGTCAAAACGAGAGATATTTTTGGATTGCT CCAAGCTTATGCTGATGGTGTGGATCTTACGGAAAAAATCCCACTGGCCAACGGACATGAGCCGGATGAAACGGCCCTCCACCTTGCAGT CAGATCCGTGGATCGAACCTCTCTTCACATTGTAGACTTTTTAGTTCAGAACAGTGGGAACCTGGATAAACAGACAGGGAAAGGCAGCAC AGCCCTGCACTACTGCTGCCTGACCGACAATGCCGAGTGCCTCAAGTTGCTCCTGCGGGGGAAGGCCTCCATCGAGATAGCAAACGAGTC AGGAGAGACTCCGCTGGACATTGCCAAGCGCCTCAAGCACGAGCACTGTGAGGAGCTGCTGACCCAAGCCTTATCTGGAAGATTTAATTC TCACGTTCACGTTGAATATGAATGGCGACTACTCCACGAAGACCTGGATGAAAGTGATGACGACATGGATGAGAAATTGCAGCCCAGTCC CAACCGGCGGGAAGACCGGCCCATCAGCTTCTACCAGCTGGGCTCCAACCAGCTTCAGTCTAACGCTGTATCTTTGGCCAGAGATGCTGC AAACCTTGCCAAGGAGAAGCAGAGGGCTTTCATGCCCAGCATCTTGCAGAATGAGACTTACGGAGCCCTCCTGAGTGGCAGCCCACCTCC CGCCCAGCCTGCAGCCCCCAGCACCACCAGCGCCCCCCCGCTTCCTCCACGGAATGTTGGCAAAGTTCAGACAGCCTCCTCTGCTAACAC CCTGTGGAAGACAAACTCTGTAAGTGTGGACGGTGGAAGCCGGCAGCGATCTTCGTCAGATCCGCCAGCTGTCCATCCACCGCTGCCCCC TCTTCGCGTGACATCTACCAATCCCCTGACCCCCACGCCGCCCCCACCCGTTGCCAAGACGCCCAGCGTAATGGAAGCCTTGAGCCAGCC GAGCAAGCCTGCCCCGCCTGGGATCTCACAGATCAGGCCCCCACCTCTGCCCCCACAGCCGCCCAGCCGCCTCCCGCAGAAGAAGCCTGC GCCGGGGGCTGACAAGTCCACCCCACTGACCAACAAAGGCCAACCGAGAGGACCTGTGGATCTCTCTGCAACGGAAGCTCTGGGTCCTCT GTCCAATGCTATGGTCCTGCAGCCCCCTGCACCCATGCCTAGGAAGTCGCAGGCAACCAAGTTGAAGCCTAAGCGGGTGAAAGCGCTCTA TAACTGTGTGGCTGACAACCCCGATGAGCTCACCTTCTCCGAGGGGGATGTGATCATCGTGGACGGGGAGGAGGACCAGGAGTGGTGGAT TGGCCACATTGATGGAGATCCTGGTCGCAAAGGCGCATTCCCGGTGTCATTTGTGCACTTTATCGCTGACTGAATTGCTACTGAACAAAA GCATTAACAGTTATGTTCCTGTTTCGTTATTGGTACCAAAACTCTTGCCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGT TCTCTAATGCCACTGCTCTGTTTTAAAAACTCAGAGGCAATTTTTACATATCAGTAATTGTTTTTATAATTTGTGGTTTTCATGAAACAT TGCTATGCATTTATTAGGAAAAACTGAATTTCCCAACAGGTGAACTGAAAAGTTATTTTAACTATTATACATAATCAAGATCCTGCCTCT ACGGAATTAGCTAAACCTAAAAATGTTTGCATTAATGAATAAATTCTTCCTGCATTCCTTGGCCCAGTTCTGGAGTTGGTGACCTTTATC ACAATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCTCGATAAAATGCCATCAGTTCAC CTTTAAAGACACACATTCCTTTGAAATCCACCCAGTGTTTAAAAAGCAACTTGGAAATTTACACATTAGCATTGTACTTTCTAGCCCTAA TTTGTGAGGTTGCAGCTATCATTATATTCTGCATGTATGTATAACCTGTTGTGAACAATCATACTTAACAAAACTACTGATGGTTTATGA CAACGTAGGGTAACTACAGTTCATTCTGTTCCAGGTTATATAAAACTGCATTTCCTGAATTTGGTTAAAAACTAAGGATGATGGATTGCA AAACAGTTCTTTTAAATTAGTTTATATGCTTTAGGTGTTTTGGAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACA CAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATCACTTGCTGTTTCCTACTGAGTGTACCACTGCCTTCCCTTCTAGCCCAG GAGAATGTTTACTCAGTTTAGTGTCTTGTATTTCTATAATACTCCAACAGGAATGGTAGTCACACTGTCTTGAAATTGAATCTGTCCATC TGTTTATAATCAAGAACATATCAGAAATATATAGGTCCCAGGTAATACTCCCAAACATCCCACTTTTTACTGTTTCAGGCCATCATATCA TTCTTAAGCTACTTGGGGTGGTAGTAGAGGATTAGGTTGTCTATTATAAAACCAAAACTCATTCGTTTAATGAACTTGACTGTCATACCT CTATTTAGTAATTGCGAGGGTAAGATTCATAGTAGGAATATTGGAAATTTTGGCACTCTGAGAATAAATAGGCATATGATACCCACTTGG ACTTTTAACAAAAGTAAAGGAATAAATTTGCATATAGGCTTGGAAAGTGAGGCAGCAATGCTGTTAACTGCATTTGTTGTGATGGTGCAT TTGATTGAAGCAGCTTGTCTTTATTATGCAAGACTGTGTAGAGTTTTTTTTTTTTTTGGCATTGTACTTTTTGTTTTTGTTATAAAGGAA GACAGAACAAACTGGAATGTTTTATGATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTTATATCTGTAGT TTTTTGTTTTTGTTTTTTTTTAAAGCACTACATCTGTTTTCACTAATTGTTAATTTCTGTTTGAACCCTTCATTTAATTTTCTCATAGAT TTAAGTAAACAGATGTATTTTGCACAGTGCACTTATGTCTATTTTAACAATCCTCCTGCATCTGTATTTTATAGTCAGCCTTTTGACCAC CTGGTGCCAGCTATATAAGGAATAAAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTCACTGGTACATAA ATACCTAGGAAATATTTTTCCAGTCTACAATTTGGTGCTATTGTGCAGTAACTAATAGTACTCTTACCAGAGGAGAAATTATATTAACGA CCCTGCTAATATCCTTTCTTAGTTATTTGCTCCTTGCAAATTAAAAAAGCAACTAAGAGAAAGAAAAACATTGTAGATATCTATTTATAT TTAAAGTTTATGTTTCATGAACTGCAGCTGCAGGATTCTGGCATTTTGCATGCCATTCTCCATCAGATCTGGGATGATGGCTCAGAACAT GTACACAGACTAAGAGTAACTGTGTGATCTGTTAAGGGGTGGATAACATAATATGCAGCTTAGGATGCTATTTTGAGATGTATGATATTC AGTTCATTCACCTGATTACTTTGGTTGCAGCACAACTGTATATATTGTATAACCGAAATTGATTATTTTCATTGTCCTTAATGCAGTGAT >67000_67000_3_POLR2A-ASAP2_POLR2A_chr17_7388176_ENST00000572844_ASAP2_chr2_9419446_ENST00000281419_length(amino acids)=1005AA_BP=36 MRLRSAPASAMHGGGPPSGDSACPLRTIKRVQFGVLSPDELALDVDRMVLYKMKKSVKAINSSGLAHVENEEQYTQALEKFGGNCVCRDD PDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLKGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGA EIAEEMEKERRFFQLQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLHTIKQAQDEERRQLIQLRD ILKSALQVEQKEDSQIRQSTAYSLHQPQGNKEHGTERNGSLYKKSDGIRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKTNPE EKKCFDLISHDRTYHFQAEDEQECQIWMSVLQNSKEEALNNAFKGDDNTGENNIVQELTKEIISEVQRMTGNDVCCDCGAPDPTWLSTNL GILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPAEDSVKPNPGSDMNARKDYITAKYIERRYARKKHA DNAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLT DNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVEYEWRLLHEDLDESDDDMDEKLQPSPNRREDRPI SFYQLGSNQLQSNAVSLARDAANLAKEKQRAFMPSILQNETYGALLSGSPPPAQPAAPSTTSAPPLPPRNVGKVQTASSANTLWKTNSVS VDGGSRQRSSSDPPAVHPPLPPLRVTSTNPLTPTPPPPVAKTPSVMEALSQPSKPAPPGISQIRPPPLPPQPPSRLPQKKPAPGADKSTP LTNKGQPRGPVDLSATEALGPLSNAMVLQPPAPMPRKSQATKLKPKRVKALYNCVADNPDELTFSEGDVIIVDGEEDQEWWIGHIDGDPG -------------------------------------------------------------- >67000_67000_4_POLR2A-ASAP2_POLR2A_chr17_7388176_ENST00000572844_ASAP2_chr2_9419446_ENST00000315273_length(transcript)=5354nt_BP=238nt CCACCTTCCCCTCCTCCGGCTTTTTCCTCCCAACTCGGGGAGGTCCTTCCCGGTGGCCGCCCTGACGAGGTCTGAGCACCTAGGCGGAGG CGGCGCAGGCTTTTTGTAGTGAGGTTTGCGCCTGCGCAGCGCGCCTGCCTCCGCCATGCACGGGGGTGGCCCCCCCTCGGGGGACAGCGC ATGCCCGCTGCGCACCATCAAGAGAGTCCAGTTCGGAGTCCTGAGTCCGGATGAACTGGCTTTGGACGTGGACCGGATGGTTCTTTACAA AATGAAGAAATCCGTGAAAGCAATCAACAGCTCTGGGCTGGCTCACGTGGAAAATGAAGAGCAGTACACCCAGGCTCTGGAGAAGTTTGG CGGCAACTGTGTATGCAGAGATGACCCAGATTTAGGAAGTGCGTTCCTGAAGTTCTCAGTGTTTACAAAGGAGTTGACAGCACTTTTCAA AAACCTGATTCAGAATATGAACAACATAATCTCCTTCCCTTTGGACAGTTTGCTGAAGGGGGACCTGAAAGGAGTGAAAGGGGATCTGAA AAAGCCTTTTGATAAAGCTTGGAAGGACTATGAAACAAAAATAACCAAGATAGAAAAGGAGAAAAAGGAACACGCCAAGCTCCATGGGAT GATTCGGACTGAAATAAGCGGAGCGGAAATTGCCGAAGAGATGGAAAAGGAGAGGCGCTTCTTCCAGCTACAGATGTGCGAGTATCTGCT GAAGGTCAACGAAATCAAGATTAAAAAGGGAGTAGATTTACTTCAGAATCTGATCAAATACTTTCATGCCCAATGCAATTTTTTTCAGGA TGGACTCAAAGCCGTGGAAAGCCTCAAACCTTCCATTGAAACGCTGTCTACGGATCTTCACACGATCAAACAGGCCCAGGATGAAGAAAG AAGGCAGTTGATACAGCTTCGAGATATTTTGAAATCCGCATTGCAGGTTGAACAGAAAGAGGACTCCCAAATTCGTCAGAGCACAGCTTA TAGCTTACATCAGCCTCAGGGAAACAAGGAACATGGGACCGAGCGGAACGGCAGCCTCTACAAGAAGAGTGACGGGATCCGAAAAGTGTG GCAGAAAAGGAAATGTTCAGTTAAAAATGGTTTTCTGACCATATCCCATGGTACCGCTAACCGGCCTCCTGCAAAGCTCAACCTGCTAAC CTGCCAGGTGAAGACCAACCCTGAGGAGAAGAAGTGCTTTGACCTCATTTCACATGACAGAACTTACCACTTTCAAGCTGAAGATGAACA GGAATGTCAAATATGGATGTCTGTGCTGCAAAATAGCAAAGAAGAAGCTTTAAACAATGCATTTAAGGGGGATGACAATACTGGAGAAAA TAACATCGTCCAAGAACTGACAAAGGAGATCATCTCAGAAGTGCAGAGGATGACGGGCAATGACGTCTGCTGTGACTGTGGGGCGCCAGA TCCTACATGGCTTTCCACCAACCTGGGCATCCTGACCTGCATCGAGTGTTCCGGAATCCACCGAGAGCTGGGGGTTCATTATTCCAGGAT GCAGTCCCTGACCTTAGATGTACTGGGAACATCTGAGCTGCTGCTCGCCAAGAATATTGGGAATGCAGGCTTTAATGAGATCATGGAATG TTGCCTACCAGCTGAGGACTCAGTCAAACCCAACCCAGGCAGCGACATGAATGCAAGAAAGGACTACATCACAGCCAAGTACATCGAGAG GAGATACGCAAGGAAGAAGCACGCGGATAACGCGGCGAAGCTTCACAGTCTTTGCGAGGCCGTCAAAACGAGAGATATTTTTGGATTGCT CCAAGCTTATGCTGATGGTGTGGATCTTACGGAAAAAATCCCACTGGCCAACGGACATGAGCCGGATGAAACGGCCCTCCACCTTGCAGT CAGATCCGTGGATCGAACCTCTCTTCACATTGTAGACTTTTTAGTTCAGAACAGTGGGAACCTGGATAAACAGACAGGGAAAGGCAGCAC AGCCCTGCACTACTGCTGCCTGACCGACAATGCCGAGTGCCTCAAGTTGCTCCTGCGGGGGAAGGCCTCCATCGAGATAGCAAACGAGTC AGGAGAGACTCCGCTGGACATTGCCAAGCGCCTCAAGCACGAGCACTGTGAGGAGCTGCTGACCCAAGCCTTATCTGGAAGATTTAATTC TCACGTTCACGTTGAATATGAATGGCGACTACTCCACGAAGACCTGGATGAAAGTGATGACGACATGGATGAGAAATTGCAGCCCAGTCC CAACCGGCGGGAAGACCGGCCCATCAGCTTCTACCAGCTGGGCTCCAACCAGCTTCAGTCTAACGCTGTATCTTTGGCCAGAGATGCTGC AAACCTTGCCAAGGAGAAGCAGAGGGCTTTCATGCCCAGCATCTTGCAGAATGAGACTTACGGAGCCCTCCTGAGTGGCAGCCCACCTCC CGCCCAGCCTGCAGCCCCCAGCACCACCAGCGCCCCCCCGCTTCCTCCACGGAATGTTGGCAAAGATCCCCTGACCCCCACGCCGCCCCC ACCCGTTGCCAAGACGCCCAGCGTAATGGAAGCCTTGAGCCAGCCGAGCAAGCCTGCCCCGCCTGGGATCTCACAGATCAGGCCCCCACC TCTGCCCCCACAGCCGCCCAGCCGCCTCCCGCAGAAGAAGCCTGCGCCGGGGGCTGACAAGTCCACCCCACTGACCAACAAAGGCCAACC GAGAGGACCTGTGGATCTCTCTGCAACGGAAGCTCTGGGTCCTCTGTCCAATGCTATGGTCCTGCAGCCCCCTGCACCCATGCCTAGGAA GTCGCAGGCAACCAAGTTGAAGCCTAAGCGGGTGAAAGCGCTCTATAACTGTGTGGCTGACAACCCCGATGAGCTCACCTTCTCCGAGGG GGATGTGATCATCGTGGACGGGGAGGAGGACCAGGAGTGGTGGATTGGCCACATTGATGGAGATCCTGGTCGCAAAGGCGCATTCCCGGT GTCATTTGTGCACTTTATCGCTGACTGAATTGCTACTGAACAAAAGCATTAACAGTTATGTTCCTGTTTCGTTATTGGTACCAAAACTCT TGCCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCCACTGCTCTGTTTTAAAAACTCAGAGGCAATTTTT ACATATCAGTAATTGTTTTTATAATTTGTGGTTTTCATGAAACATTGCTATGCATTTATTAGGAAAAACTGAATTTCCCAACAGGTGAAC TGAAAAGTTATTTTAACTATTATACATAATCAAGATCCTGCCTCTACGGAATTAGCTAAACCTAAAAATGTTTGCATTAATGAATAAATT CTTCCTGCATTCCTTGGCCCAGTTCTGGAGTTGGTGACCTTTATCACAATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTC CATAGCCCAGCTCTGAACTTTCTCGATAAAATGCCATCAGTTCACCTTTAAAGACACACATTCCTTTGAAATCCACCCAGTGTTTAAAAA GCAACTTGGAAATTTACACATTAGCATTGTACTTTCTAGCCCTAATTTGTGAGGTTGCAGCTATCATTATATTCTGCATGTATGTATAAC CTGTTGTGAACAATCATACTTAACAAAACTACTGATGGTTTATGACAACGTAGGGTAACTACAGTTCATTCTGTTCCAGGTTATATAAAA CTGCATTTCCTGAATTTGGTTAAAAACTAAGGATGATGGATTGCAAAACAGTTCTTTTAAATTAGTTTATATGCTTTAGGTGTTTTGGAA TTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATCACT TGCTGTTTCCTACTGAGTGTACCACTGCCTTCCCTTCTAGCCCAGGAGAATGTTTACTCAGTTTAGTGTCTTGTATTTCTATAATACTCC AACAGGAATGGTAGTCACACTGTCTTGAAATTGAATCTGTCCATCTGTTTATAATCAAGAACATATCAGAAATATATAGGTCCCAGGTAA TACTCCCAAACATCCCACTTTTTACTGTTTCAGGCCATCATATCATTCTTAAGCTACTTGGGGTGGTAGTAGAGGATTAGGTTGTCTATT ATAAAACCAAAACTCATTCGTTTAATGAACTTGACTGTCATACCTCTATTTAGTAATTGCGAGGGTAAGATTCATAGTAGGAATATTGGA AATTTTGGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGTAAAGGAATAAATTTGCATATAGGCTTGGAA AGTGAGGCAGCAATGCTGTTAACTGCATTTGTTGTGATGGTGCATTTGATTGAAGCAGCTTGTCTTTATTATGCAAGACTGTGTAGAGTT TTTTTTTTTTTTGGCATTGTACTTTTTGTTTTTGTTATAAAGGAAGACAGAACAAACTGGAATGTTTTATGATGTTGTATAGCAATCGCT TTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTTATATCTGTAGTTTTTTGTTTTTGTTTTTTTTTAAAGCACTACATCTGTTTTCACTA ATTGTTAATTTCTGTTTGAACCCTTCATTTAATTTTCTCATAGATTTAAGTAAACAGATGTATTTTGCACAGTGCACTTATGTCTATTTT AACAATCCTCCTGCATCTGTATTTTATAGTCAGCCTTTTGACCACCTGGTGCCAGCTATATAAGGAATAAAGTTGATTCATATCAACATT AGAACTCCAGTCCCAAACTAATCTGTCAGGTTCACTGGTACATAAATACCTAGGAAATATTTTTCCAGTCTACAATTTGGTGCTATTGTG CAGTAACTAATAGTACTCTTACCAGAGGAGAAATTATATTAACGACCCTGCTAATATCCTTTCTTAGTTATTTGCTCCTTGCAAATTAAA AAAGCAACTAAGAGAAAGAAAAACATTGTAGATATCTATTTATATTTAAAGTTTATGTTTCATGAACTGCAGCTGCAGGATTCTGGCATT TTGCATGCCATTCTCCATCAGATCTGGGATGATGGCTCAGAACATGTACACAGACTAAGAGTAACTGTGTGATCTGTTAAGGGGTGGATA ACATAATATGCAGCTTAGGATGCTATTTTGAGATGTATGATATTCAGTTCATTCACCTGATTACTTTGGTTGCAGCACAACTGTATATAT TGTATAACCGAAATTGATTATTTTCATTGTCCTTAATGCAGTGATTTATAATTAGAGCATGTTTAATAAGTTTACTCTTCTTGTTAACTA >67000_67000_4_POLR2A-ASAP2_POLR2A_chr17_7388176_ENST00000572844_ASAP2_chr2_9419446_ENST00000315273_length(amino acids)=960AA_BP=36 MRLRSAPASAMHGGGPPSGDSACPLRTIKRVQFGVLSPDELALDVDRMVLYKMKKSVKAINSSGLAHVENEEQYTQALEKFGGNCVCRDD PDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLKGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGA EIAEEMEKERRFFQLQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFFQDGLKAVESLKPSIETLSTDLHTIKQAQDEERRQLIQLRD ILKSALQVEQKEDSQIRQSTAYSLHQPQGNKEHGTERNGSLYKKSDGIRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKTNPE EKKCFDLISHDRTYHFQAEDEQECQIWMSVLQNSKEEALNNAFKGDDNTGENNIVQELTKEIISEVQRMTGNDVCCDCGAPDPTWLSTNL GILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPAEDSVKPNPGSDMNARKDYITAKYIERRYARKKHA DNAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLT DNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVEYEWRLLHEDLDESDDDMDEKLQPSPNRREDRPI SFYQLGSNQLQSNAVSLARDAANLAKEKQRAFMPSILQNETYGALLSGSPPPAQPAAPSTTSAPPLPPRNVGKDPLTPTPPPPVAKTPSV MEALSQPSKPAPPGISQIRPPPLPPQPPSRLPQKKPAPGADKSTPLTNKGQPRGPVDLSATEALGPLSNAMVLQPPAPMPRKSQATKLKP -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for POLR2A-ASAP2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for POLR2A-ASAP2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for POLR2A-ASAP2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |