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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:ARNT-CBLB (FusionGDB2 ID:6734) |
Fusion Gene Summary for ARNT-CBLB |
Fusion gene summary |
Fusion gene information | Fusion gene name: ARNT-CBLB | Fusion gene ID: 6734 | Hgene | Tgene | Gene symbol | ARNT | CBLB | Gene ID | 375056 | 868 |
Gene name | MIA SH3 domain ER export factor 3 | Cbl proto-oncogene B | |
Synonyms | ARNT|D320|TANGO|TANGO1|UNQ6077 | Cbl-b|Nbla00127|RNF56 | |
Cytomap | 1q41 | 3q13.11 | |
Type of gene | protein-coding | protein-coding | |
Description | transport and Golgi organization protein 1 homologC219-reactive peptideMIA family member 3, ER export factormelanoma inhibitory activity family, member 3melanoma inhibitory activity protein 3transport and Golgi organization protein 1 | E3 ubiquitin-protein ligase CBL-BCas-Br-M (murine) ecotropic retroviral transforming sequence bCbl proto-oncogene B, E3 ubiquitin protein ligaseCbl proto-oncogene, E3 ubiquitin protein ligase BRING finger protein 56RING-type E3 ubiquitin transferase | |
Modification date | 20200313 | 20200327 | |
UniProtAcc | P27540 | Q13191 | |
Ensembl transtripts involved in fusion gene | ENST00000354396, ENST00000358595, ENST00000505755, ENST00000515192, ENST00000468970, | ENST00000545639, ENST00000394027, ENST00000403724, ENST00000405772, ENST00000407712, ENST00000264122, | |
Fusion gene scores | * DoF score | 18 X 16 X 9=2592 | 13 X 14 X 7=1274 |
# samples | 18 | 16 | |
** MAII score | log2(18/2592*10)=-3.84799690655495 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(16/1274*10)=-2.99322146736894 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ARNT [Title/Abstract] AND CBLB [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ARNT(150849019)-CBLB(105439094), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ARNT | GO:0002687 | positive regulation of leukocyte migration | 17726152 |
Hgene | ARNT | GO:0007162 | negative regulation of cell adhesion | 17726152 |
Hgene | ARNT | GO:0030336 | negative regulation of cell migration | 17044017 |
Hgene | ARNT | GO:0042060 | wound healing | 17044017 |
Fusion gene breakpoints across ARNT (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across CBLB (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUAD | TCGA-O1-A52J-01A | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
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Fusion Gene ORF analysis for ARNT-CBLB |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-3UTR | ENST00000354396 | ENST00000545639 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5CDS-3UTR | ENST00000358595 | ENST00000545639 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5CDS-3UTR | ENST00000505755 | ENST00000545639 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5CDS-intron | ENST00000354396 | ENST00000394027 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5CDS-intron | ENST00000354396 | ENST00000403724 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5CDS-intron | ENST00000354396 | ENST00000405772 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5CDS-intron | ENST00000354396 | ENST00000407712 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5CDS-intron | ENST00000358595 | ENST00000394027 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5CDS-intron | ENST00000358595 | ENST00000403724 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5CDS-intron | ENST00000358595 | ENST00000405772 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5CDS-intron | ENST00000358595 | ENST00000407712 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5CDS-intron | ENST00000505755 | ENST00000394027 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5CDS-intron | ENST00000505755 | ENST00000403724 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5CDS-intron | ENST00000505755 | ENST00000405772 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5CDS-intron | ENST00000505755 | ENST00000407712 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5UTR-3CDS | ENST00000515192 | ENST00000264122 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5UTR-3UTR | ENST00000515192 | ENST00000545639 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5UTR-intron | ENST00000515192 | ENST00000394027 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5UTR-intron | ENST00000515192 | ENST00000403724 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5UTR-intron | ENST00000515192 | ENST00000405772 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
5UTR-intron | ENST00000515192 | ENST00000407712 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
In-frame | ENST00000354396 | ENST00000264122 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
In-frame | ENST00000358595 | ENST00000264122 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
In-frame | ENST00000505755 | ENST00000264122 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
intron-3CDS | ENST00000468970 | ENST00000264122 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
intron-3UTR | ENST00000468970 | ENST00000545639 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
intron-intron | ENST00000468970 | ENST00000394027 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
intron-intron | ENST00000468970 | ENST00000403724 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
intron-intron | ENST00000468970 | ENST00000405772 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
intron-intron | ENST00000468970 | ENST00000407712 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000358595 | ARNT | chr1 | 150849019 | - | ENST00000264122 | CBLB | chr3 | 105439094 | - | 5481 | 226 | 34 | 1971 | 645 |
ENST00000354396 | ARNT | chr1 | 150849019 | - | ENST00000264122 | CBLB | chr3 | 105439094 | - | 5292 | 37 | 4 | 1782 | 592 |
ENST00000505755 | ARNT | chr1 | 150849019 | - | ENST00000264122 | CBLB | chr3 | 105439094 | - | 5322 | 67 | 1 | 1812 | 603 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000358595 | ENST00000264122 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - | 0.001083971 | 0.99891603 |
ENST00000354396 | ENST00000264122 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - | 0.00104341 | 0.99895656 |
ENST00000505755 | ENST00000264122 | ARNT | chr1 | 150849019 | - | CBLB | chr3 | 105439094 | - | 0.001034657 | 0.9989654 |
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Fusion Genomic Features for ARNT-CBLB |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for ARNT-CBLB |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:150849019/chr3:105439094) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
ARNT | CBLB |
FUNCTION: Required for activity of the Ah (dioxin) receptor. This protein is required for the ligand-binding subunit to translocate from the cytosol to the nucleus after ligand binding. The complex then initiates transcription of genes involved in the activation of PAH procarcinogens. The heterodimer binds to core DNA sequence 5'-TACGTG-3' within the hypoxia response element (HRE) of target gene promoters and functions as a transcriptional regulator of the adaptive response to hypoxia (By similarity). The heterodimer ARNT:AHR binds to core DNA sequence 5'-TGCGTG-3' within the dioxin response element (DRE) of target gene promoters and activates their transcription (PubMed:28396409). {ECO:0000250|UniProtKB:P53762, ECO:0000269|PubMed:28396409}. | FUNCTION: E3 ubiquitin-protein ligase which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes, and transfers it to substrates, generally promoting their degradation by the proteasome. Negatively regulates TCR (T-cell receptor), BCR (B-cell receptor) and FCER1 (high affinity immunoglobulin epsilon receptor) signal transduction pathways. In naive T-cells, inhibits VAV1 activation upon TCR engagement and imposes a requirement for CD28 costimulation for proliferation and IL-2 production. Also acts by promoting PIK3R1/p85 ubiquitination, which impairs its recruitment to the TCR and subsequent activation. In activated T-cells, inhibits PLCG1 activation and calcium mobilization upon restimulation and promotes anergy. In B-cells, acts by ubiquitinating SYK and promoting its proteasomal degradation. Slightly promotes SRC ubiquitination. May be involved in EGFR ubiquitination and internalization. May be functionally coupled with the E2 ubiquitin-protein ligase UB2D3. In association with CBL, required for proper feedback inhibition of ciliary platelet-derived growth factor receptor-alpha (PDGFRA) signaling pathway via ubiquitination and internalization of PDGFRA (By similarity). {ECO:0000250|UniProtKB:Q3TTA7, ECO:0000269|PubMed:10022120, ECO:0000269|PubMed:10086340, ECO:0000269|PubMed:11087752, ECO:0000269|PubMed:11526404, ECO:0000269|PubMed:14661060, ECO:0000269|PubMed:20525694}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000264122 | 8 | 19 | 477_925 | 401 | 983.0 | Compositional bias | Note=Pro-rich | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000403724 | 8 | 15 | 477_925 | 401 | 771.0 | Compositional bias | Note=Pro-rich | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000264122 | 8 | 19 | 931_970 | 401 | 983.0 | Domain | UBA | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000403724 | 8 | 15 | 931_970 | 401 | 771.0 | Domain | UBA |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000358595 | - | 1 | 22 | 503_507 | 8 | 790.0 | Compositional bias | Note=Poly-Gln |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000358595 | - | 1 | 22 | 710_769 | 8 | 790.0 | Compositional bias | Note=Gln-rich |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000358595 | - | 1 | 22 | 738_741 | 8 | 790.0 | Compositional bias | Note=Poly-Ser |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000358595 | - | 1 | 22 | 99_102 | 8 | 790.0 | Compositional bias | Note=Poly-Arg |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000505755 | - | 1 | 21 | 503_507 | 8 | 775.0 | Compositional bias | Note=Poly-Gln |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000505755 | - | 1 | 21 | 710_769 | 8 | 775.0 | Compositional bias | Note=Gln-rich |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000505755 | - | 1 | 21 | 738_741 | 8 | 775.0 | Compositional bias | Note=Poly-Ser |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000505755 | - | 1 | 21 | 99_102 | 8 | 775.0 | Compositional bias | Note=Poly-Arg |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000515192 | - | 1 | 23 | 503_507 | 0 | 776.0 | Compositional bias | Note=Poly-Gln |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000515192 | - | 1 | 23 | 710_769 | 0 | 776.0 | Compositional bias | Note=Gln-rich |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000515192 | - | 1 | 23 | 738_741 | 0 | 776.0 | Compositional bias | Note=Poly-Ser |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000515192 | - | 1 | 23 | 99_102 | 0 | 776.0 | Compositional bias | Note=Poly-Arg |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000358595 | - | 1 | 22 | 161_235 | 8 | 790.0 | Domain | PAS 1 |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000358595 | - | 1 | 22 | 349_419 | 8 | 790.0 | Domain | PAS 2 |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000358595 | - | 1 | 22 | 424_467 | 8 | 790.0 | Domain | Note=PAC |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000358595 | - | 1 | 22 | 89_142 | 8 | 790.0 | Domain | bHLH |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000505755 | - | 1 | 21 | 161_235 | 8 | 775.0 | Domain | PAS 1 |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000505755 | - | 1 | 21 | 349_419 | 8 | 775.0 | Domain | PAS 2 |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000505755 | - | 1 | 21 | 424_467 | 8 | 775.0 | Domain | Note=PAC |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000505755 | - | 1 | 21 | 89_142 | 8 | 775.0 | Domain | bHLH |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000515192 | - | 1 | 23 | 161_235 | 0 | 776.0 | Domain | PAS 1 |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000515192 | - | 1 | 23 | 349_419 | 0 | 776.0 | Domain | PAS 2 |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000515192 | - | 1 | 23 | 424_467 | 0 | 776.0 | Domain | Note=PAC |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000515192 | - | 1 | 23 | 89_142 | 0 | 776.0 | Domain | bHLH |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000358595 | - | 1 | 22 | 112_168 | 8 | 790.0 | Region | Required for heterodimer formation with HIF1A |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000358595 | - | 1 | 22 | 112_264 | 8 | 790.0 | Region | Required for heterodimer formation with EPAS1 |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000358595 | - | 1 | 22 | 167_171 | 8 | 790.0 | Region | Mediates the transcription activity and dimerization of the AHR:ARNT complex |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000358595 | - | 1 | 22 | 88_128 | 8 | 790.0 | Region | DNA-binding |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000505755 | - | 1 | 21 | 112_168 | 8 | 775.0 | Region | Required for heterodimer formation with HIF1A |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000505755 | - | 1 | 21 | 112_264 | 8 | 775.0 | Region | Required for heterodimer formation with EPAS1 |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000505755 | - | 1 | 21 | 167_171 | 8 | 775.0 | Region | Mediates the transcription activity and dimerization of the AHR:ARNT complex |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000505755 | - | 1 | 21 | 88_128 | 8 | 775.0 | Region | DNA-binding |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000515192 | - | 1 | 23 | 112_168 | 0 | 776.0 | Region | Required for heterodimer formation with HIF1A |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000515192 | - | 1 | 23 | 112_264 | 0 | 776.0 | Region | Required for heterodimer formation with EPAS1 |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000515192 | - | 1 | 23 | 167_171 | 0 | 776.0 | Region | Mediates the transcription activity and dimerization of the AHR:ARNT complex |
Hgene | ARNT | chr1:150849019 | chr3:105439094 | ENST00000515192 | - | 1 | 23 | 88_128 | 0 | 776.0 | Region | DNA-binding |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000264122 | 8 | 19 | 219_232 | 401 | 983.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000403724 | 8 | 15 | 219_232 | 401 | 771.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000264122 | 8 | 19 | 35_343 | 401 | 983.0 | Domain | Cbl-PTB | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000403724 | 8 | 15 | 35_343 | 401 | 771.0 | Domain | Cbl-PTB | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000264122 | 8 | 19 | 168_240 | 401 | 983.0 | Region | Note=EF-hand-like | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000264122 | 8 | 19 | 241_343 | 401 | 983.0 | Region | Note=SH2-like | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000264122 | 8 | 19 | 344_372 | 401 | 983.0 | Region | Note=Linker | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000264122 | 8 | 19 | 35_167 | 401 | 983.0 | Region | Note=4H | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000403724 | 8 | 15 | 168_240 | 401 | 771.0 | Region | Note=EF-hand-like | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000403724 | 8 | 15 | 241_343 | 401 | 771.0 | Region | Note=SH2-like | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000403724 | 8 | 15 | 344_372 | 401 | 771.0 | Region | Note=Linker | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000403724 | 8 | 15 | 35_167 | 401 | 771.0 | Region | Note=4H | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000264122 | 8 | 19 | 373_412 | 401 | 983.0 | Zinc finger | RING-type | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000403724 | 8 | 15 | 373_412 | 401 | 771.0 | Zinc finger | RING-type |
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Fusion Gene Sequence for ARNT-CBLB |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>6734_6734_1_ARNT-CBLB_ARNT_chr1_150849019_ENST00000354396_CBLB_chr3_105439094_ENST00000264122_length(transcript)=5292nt_BP=37nt GCATCTGCGGCCATGGCGGCGACTACTGCCAACCCCGGAGTCGGATGGTCAGGGCTGCCCTTTCTGTCGTTGTGAAATAAAAGGAACTGA GCCCATAATCGTGGACCCCTTTGATCCAAGAGATGAAGGCTCCAGGTGTTGCAGCATCATTGACCCCTTTGGCATGCCGATGCTAGACTT GGACGACGATGATGATCGTGAGGAGTCCTTGATGATGAATCGGTTGGCAAACGTCCGAAAGTGCACTGACAGGCAGAACTCACCAGTCAC ATCACCAGGATCCTCTCCCCTTGCCCAGAGAAGAAAGCCACAGCCTGACCCACTCCAGATCCCACATCTAAGCCTGCCACCCGTGCCTCC TCGCCTGGATCTAATTCAGAAAGGCATAGTTAGATCTCCCTGTGGCAGCCCAACGGGTTCACCAAAGTCTTCTCCTTGCATGGTGAGAAA ACAAGATAAACCACTCCCAGCACCACCTCCTCCCTTAAGAGATCCTCCTCCACCGCCACCTGAAAGACCTCCACCAATCCCACCAGACAA TAGACTGAGTAGACACATCCATCATGTGGAAAGCGTGCCTTCCAGAGACCCGCCAATGCCTCTTGAAGCATGGTGCCCTCGGGATGTGTT TGGGACTAATCAGCTTGTGGGATGTCGACTCCTAGGGGAGGGCTCTCCAAAACCTGGAATCACAGCGAGTTCAAATGTCAATGGAAGGCA CAGTAGAGTGGGCTCTGACCCAGTGCTTATGCGGAAACACAGACGCCATGATTTGCCTTTAGAAGGAGCTAAGGTCTTTTCCAATGGTCA CCTTGGAAGTGAAGAATATGATGTTCCTCCCCGGCTTTCTCCTCCTCCTCCAGTTACCACCCTCCTCCCTAGCATAAAGTGTACTGGTCC GTTAGCAAATTCTCTTTCAGAGAAAACAAGAGACCCAGTAGAGGAAGATGATGATGAATACAAGATTCCTTCATCCCACCCTGTTTCCCT GAATTCACAACCATCTCATTGTCATAATGTAAAACCTCCTGTTCGGTCTTGTGATAATGGTCACTGTATGCTGAATGGAACACATGGTCC ATCTTCAGAGAAGAAATCAAACATCCCTGACTTAAGCATATATTTAAAGGGAGATGTTTTTGATTCAGCCTCTGATCCCGTGCCATTACC ACCTGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGGTTCTTCACTCAACAGGACGCCCTCTGATTATGATCTTCTCATCCCTCCATT AGGTGAAGATGCTTTTGATGCCCTCCCTCCATCTCTCCCACCTCCCCCACCTCCTGCAAGGCATAGTCTCATTGAACATTCAAAACCTCC TGGCTCCAGTAGCCGGCCATCCTCAGGACAGGATCTTTTTCTTCTTCCTTCAGATCCCTTTGTTGATCTAGCAAGTGGCCAAGTTCCTTT GCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAAAACTAACAGAACATCACAGGACTATGATCAGCTTCCTTCATGTTCAGATGGTTC ACAGGCACCAGCCAGACCCCCTAAACCACGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGAGGCGGCATT GGAAAATGTCGATGCAAAAATTGCAAAACTCATGGGAGAGGGTTATGCCTTTGAAGAGGTGAAGAGAGCCTTAGAGATAGCCCAGAATAA TGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGAACTGTAGAC ACCAAAATGGAAAGCAATCGATGTATTCCAAGAGTGTGGAAATAAAGAGAACTGAGATGGAATTCAAGAGAGAAGTGTCTCCTCCTCGTG TAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTCCTTGTTTTT GCTAGCCATATTTTTAAATCAGGGTTGAACTGACAAAAATAATTTAAAGACGTTTACTTCCCTTGAACTTTGAACCTGTGAAATGCTTTA CCTTGTTTACAGTTTGGCAAAGTTGCAGTTTGTTCTTGTTTTTAGTTTAGTTTTGTTTTGGTGTTTTGATACCTGTACTGTGTTCTTCAC AGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCACATCAACAGCTAAATCATTTATTCATATG GATCTCTACCATCCCCATGCCTTGCCCAGGTCCAGTTCCATTTCTCTCATTCACAAGATGCTTTGAAGGTTCTGATTTTCAACTGATCAA ACTAATGCAAAAAAAAAAAAGTATGTATTCTTCACTACTGAGTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAAAACCTGAAT GTATAAAGCATTTATTTGTCAATAAACTGCCTTTTGTAAGGGGTTTTCACATAACATAGAGGAGCTTCCCTTTTTTGTTTAAGTTTTGTA ACCTTTAATCCTCCATATTCTCATGTCTGTCATCCCAGGGGTGTCACAACTGTAAAAATCTACAATATTAGAAAGCAGCTACTACAGATG TGGAAGAGAGAACACTTGTATAAGACAATGCTGTACTGAAGTTATATAACAAGGTCCCCTGATACTTATGCCTGCATTACTTTGAGGGAT GCTGAATGAGAGGACCATCTCCCTGAAATATATTAATAATTTTCAGATAAAATTATGAACATAACATACCTTTTCTCAAGTGGAATTAGA GTTCATTTCCCATTTAAGTGATTACACTCTATCTCCTAAGAGCTGTGGGAACCAGTTCATATTGCAGTGGAAACATTAACTCTTCGTTGC ACTGTTGAGTGTCAAGGCTACTGTGGCAATGTTTTTTGCAAAGTTCTCAGTAATTTTCTCTCTGCAATCAAATTAGAGTTCATATTTAAT TTGCAGATTCTCTCATTCATTGCTCCACACTGCTTTATCAAATCAGGTGAAAGAAATTAATGTAGTTTTGCCTATTTTACAAAATGGTGG TTGGTTCTTTAAACACCATGTTATTACTCTTAATAAATCTACAAATATTTATTGAGCATCTATGATATGCTTGGTGCTGTTAGGCACTGT GTTTTTAAAGCACAAACTCTCAAAAGCTGATTCCAGCGTAATGTTTTATTTTTGTTTTTCTGTGTTTTTTATGACAAAGTCTGTCTGATA GACAAAGCCTGGAAGGTTTCCCCCAGGGCTTTAGAATTTAGAATTAGCTGGTTTTCATTTCAAATGGGAAATTAATGGAGAAATGAGATA AAATCATCTCTGTGTAAATGCTTGAACCCACAGAAAGTTTTCTAAATATGGACTAATTGTGGGTTTGTGCATATTTCTGTGTCTCCTCTT TTCACTTCACACCCACCATGATATAAAAAGATGCATCAGAGAGTGAGCCTGCCTTCAGGACCTGAAAGGACATGACTGAACATCTAGTAG ATCTGGTGGAAATTAATGTTATACAAAAGACACGTAGACTAAGTTGACCCTGGGAGAGGAGTTAATACATTCCTTTGCAAAGTGACATGT GCCCTTTTTTTGACAGTCTGGCTTTCATGGTATGAGATGAGGACTCACAGGCCTTGGGTAATTTCTGCTTTTGTATGAATTTTTTCAGAT GGTTCTGAGCTGGTTATGTCCCTGGAGGGGAATTTTTCATTTGCCTTAGATGTTCTTCCCATGAGTAGGTACATGAGTGAAGTTTCTTAC ACTTTTAAAATTGCATTGGCAAATTTTCTTTTGCTTTATGAACCCCTGTTTTGTCATTATGATTTTTCACTTGTTTTAACAGTTTCAGAT GTCACCTTGGAATAGCACTGTTTATTTTGGCCTTTTTATGATTGCTGATGATAGGTACAGTCTAAAGGCCAAAAGTTGCCACTTCATTGT GATAACATTGTTGCAACATTCCTAATATATTAGAGAATGATGTAAAATAAGAATGTTAGAGAACATAGCACATTCTCATTCAGTTTATAA ACAATATTTGAAAATTTCCAGTGAGAATTAAAAAAGGACTAGTGATGATATAGCAAACCTGGACCTGAAATTTGGGGGTGGGGGGTGGGG GGATATCTGTTTTGCAGAGAAAATTTACCAGCCTCCAGCAAAATCTCTGCATCTTGTACTCAATAGCAACCATTAGTATTGTCATTTAAA AAGAATGAATCAAAAATTCATACGTAATGGAATGAAAAGAGGAAAACTTTCTATTAAACACTGTCAAGAAAGACCCATTGCTATCTATCA CCTATGAAATTAAACCTAAAAAAATTTTTTTTTATTGTAAAAGCGACTGCTCGTTGATGTCTGGAAGTGATCCAGACTTTGTTTCACTGT GATCCAAAAAGTTAGACATTCCTTCCATTTCTCAAGATTTGGTAACAATTTTTTTTTAAGTCAGCATTTCATATAATACATAAAATTAAG ACAAATTAACTTACTGATATGTGGCCAATATCAACCCTTCTCACCCAACCCAAACATGTTCTGGAGATAGAAGGACTTATCCTCAATTAT ATTCCAGTAAATTTATCTCCATAATCTGTTTTATCCCCTAATGTATGATATATCTCACCAAATTTTTCTAGAATTGAATAAAAGCAGTTT TTGCTTAACTTGAATTTCCTTCCACAAATACAACCTTCAGCTCTTCCCTCTCTGTTTCCCTTTTGCCCACATTGCAAATAGTCTTCATAA TAGAACCCTCACTGCAACTTAAAAGGGTCCCATTTCTTAACTCAGCATTTCATATACCAAGAACACTTGCAAAGATTTCTTCATAATGTG ATTTTTTAATTTTTCAGTTCCAGAAGCATTTCCTACAGTTCGAACGTTATTTTTTCTCTCAGATTTTCAACTTGAAGCTTTGATTTGCAC TGAATTAACTTGGATAAAATTTTAGTTTCTCTCTTCAGCTAACAGATTTGGAAGCAAATTACAGTATACTTGAATAATTCAGGTACTACC TGTTGACCTGGAATTTTAGTGATTCTGGGAAAGTTTTCCAGACAAAGACACCAATAGAGTGAAGGGTTTTTTCCCCAATTACTATTTTAT TGTTTTTTAAAATGCCTTTTTAAAACTTGTGTGATGTGGCAAAATAGTCATATGTTCAATTAATTTATATTTTATTCATTCCTTTTCAAT >6734_6734_1_ARNT-CBLB_ARNT_chr1_150849019_ENST00000354396_CBLB_chr3_105439094_ENST00000264122_length(amino acids)=592AA_BP=11 MRPWRRLLPTPESDGQGCPFCRCEIKGTEPIIVDPFDPRDEGSRCCSIIDPFGMPMLDLDDDDDREESLMMNRLANVRKCTDRQNSPVTS PGSSPLAQRRKPQPDPLQIPHLSLPPVPPRLDLIQKGIVRSPCGSPTGSPKSSPCMVRKQDKPLPAPPPPLRDPPPPPPERPPPIPPDNR LSRHIHHVESVPSRDPPMPLEAWCPRDVFGTNQLVGCRLLGEGSPKPGITASSNVNGRHSRVGSDPVLMRKHRRHDLPLEGAKVFSNGHL GSEEYDVPPRLSPPPPVTTLLPSIKCTGPLANSLSEKTRDPVEEDDDEYKIPSSHPVSLNSQPSHCHNVKPPVRSCDNGHCMLNGTHGPS SEKKSNIPDLSIYLKGDVFDSASDPVPLPPARPPTRDNPKHGSSLNRTPSDYDLLIPPLGEDAFDALPPSLPPPPPPARHSLIEHSKPPG SSSRPSSGQDLFLLPSDPFVDLASGQVPLPPARRLPGENVKTNRTSQDYDQLPSCSDGSQAPARPPKPRPRRTAPEIHHRKPHGPEAALE -------------------------------------------------------------- >6734_6734_2_ARNT-CBLB_ARNT_chr1_150849019_ENST00000358595_CBLB_chr3_105439094_ENST00000264122_length(transcript)=5481nt_BP=226nt ATATAGGCGGGGTCTCCCCGCCGCAGGGGCTGGGATGCTGGGGGCTGCTGAAGCCGCCATCTTGGATTCCGCGGTAGCGGAGGCGGCGGT CAGGCGCCGCTTCTGGGGAGTGGCCTTTCTTTTCCCCTCCCTCCCGGTTCGGTGGCGGCGGCTCCTCCCACTGGGGGGGGGGGTGGCGCG GCGGCGGTGGCATCTGCGGCCATGGCGGCGACTACTGCCAACCCCGGAGTCGGATGGTCAGGGCTGCCCTTTCTGTCGTTGTGAAATAAA AGGAACTGAGCCCATAATCGTGGACCCCTTTGATCCAAGAGATGAAGGCTCCAGGTGTTGCAGCATCATTGACCCCTTTGGCATGCCGAT GCTAGACTTGGACGACGATGATGATCGTGAGGAGTCCTTGATGATGAATCGGTTGGCAAACGTCCGAAAGTGCACTGACAGGCAGAACTC ACCAGTCACATCACCAGGATCCTCTCCCCTTGCCCAGAGAAGAAAGCCACAGCCTGACCCACTCCAGATCCCACATCTAAGCCTGCCACC CGTGCCTCCTCGCCTGGATCTAATTCAGAAAGGCATAGTTAGATCTCCCTGTGGCAGCCCAACGGGTTCACCAAAGTCTTCTCCTTGCAT GGTGAGAAAACAAGATAAACCACTCCCAGCACCACCTCCTCCCTTAAGAGATCCTCCTCCACCGCCACCTGAAAGACCTCCACCAATCCC ACCAGACAATAGACTGAGTAGACACATCCATCATGTGGAAAGCGTGCCTTCCAGAGACCCGCCAATGCCTCTTGAAGCATGGTGCCCTCG GGATGTGTTTGGGACTAATCAGCTTGTGGGATGTCGACTCCTAGGGGAGGGCTCTCCAAAACCTGGAATCACAGCGAGTTCAAATGTCAA TGGAAGGCACAGTAGAGTGGGCTCTGACCCAGTGCTTATGCGGAAACACAGACGCCATGATTTGCCTTTAGAAGGAGCTAAGGTCTTTTC CAATGGTCACCTTGGAAGTGAAGAATATGATGTTCCTCCCCGGCTTTCTCCTCCTCCTCCAGTTACCACCCTCCTCCCTAGCATAAAGTG TACTGGTCCGTTAGCAAATTCTCTTTCAGAGAAAACAAGAGACCCAGTAGAGGAAGATGATGATGAATACAAGATTCCTTCATCCCACCC TGTTTCCCTGAATTCACAACCATCTCATTGTCATAATGTAAAACCTCCTGTTCGGTCTTGTGATAATGGTCACTGTATGCTGAATGGAAC ACATGGTCCATCTTCAGAGAAGAAATCAAACATCCCTGACTTAAGCATATATTTAAAGGGAGATGTTTTTGATTCAGCCTCTGATCCCGT GCCATTACCACCTGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGGTTCTTCACTCAACAGGACGCCCTCTGATTATGATCTTCTCAT CCCTCCATTAGGTGAAGATGCTTTTGATGCCCTCCCTCCATCTCTCCCACCTCCCCCACCTCCTGCAAGGCATAGTCTCATTGAACATTC AAAACCTCCTGGCTCCAGTAGCCGGCCATCCTCAGGACAGGATCTTTTTCTTCTTCCTTCAGATCCCTTTGTTGATCTAGCAAGTGGCCA AGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAAAACTAACAGAACATCACAGGACTATGATCAGCTTCCTTCATGTTC AGATGGTTCACAGGCACCAGCCAGACCCCCTAAACCACGACCGCGCAGGACTGCACCAGAAATTCACCACAGAAAACCCCATGGGCCTGA GGCGGCATTGGAAAATGTCGATGCAAAAATTGCAAAACTCATGGGAGAGGGTTATGCCTTTGAAGAGGTGAAGAGAGCCTTAGAGATAGC CCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACGTCTAAATCTATAGCAGCCAGA ACTGTAGACACCAAAATGGAAAGCAATCGATGTATTCCAAGAGTGTGGAAATAAAGAGAACTGAGATGGAATTCAAGAGAGAAGTGTCTC CTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAGGATGTCGACAGCTGTGGCTTC CTTGTTTTTGCTAGCCATATTTTTAAATCAGGGTTGAACTGACAAAAATAATTTAAAGACGTTTACTTCCCTTGAACTTTGAACCTGTGA AATGCTTTACCTTGTTTACAGTTTGGCAAAGTTGCAGTTTGTTCTTGTTTTTAGTTTAGTTTTGTTTTGGTGTTTTGATACCTGTACTGT GTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCACATCAACAGCTAAATCATTT ATTCATATGGATCTCTACCATCCCCATGCCTTGCCCAGGTCCAGTTCCATTTCTCTCATTCACAAGATGCTTTGAAGGTTCTGATTTTCA ACTGATCAAACTAATGCAAAAAAAAAAAAGTATGTATTCTTCACTACTGAGTTTCTTCTTTGGAAACCATCACTATTGAGAGATGGGAAA AACCTGAATGTATAAAGCATTTATTTGTCAATAAACTGCCTTTTGTAAGGGGTTTTCACATAACATAGAGGAGCTTCCCTTTTTTGTTTA AGTTTTGTAACCTTTAATCCTCCATATTCTCATGTCTGTCATCCCAGGGGTGTCACAACTGTAAAAATCTACAATATTAGAAAGCAGCTA CTACAGATGTGGAAGAGAGAACACTTGTATAAGACAATGCTGTACTGAAGTTATATAACAAGGTCCCCTGATACTTATGCCTGCATTACT TTGAGGGATGCTGAATGAGAGGACCATCTCCCTGAAATATATTAATAATTTTCAGATAAAATTATGAACATAACATACCTTTTCTCAAGT GGAATTAGAGTTCATTTCCCATTTAAGTGATTACACTCTATCTCCTAAGAGCTGTGGGAACCAGTTCATATTGCAGTGGAAACATTAACT CTTCGTTGCACTGTTGAGTGTCAAGGCTACTGTGGCAATGTTTTTTGCAAAGTTCTCAGTAATTTTCTCTCTGCAATCAAATTAGAGTTC ATATTTAATTTGCAGATTCTCTCATTCATTGCTCCACACTGCTTTATCAAATCAGGTGAAAGAAATTAATGTAGTTTTGCCTATTTTACA AAATGGTGGTTGGTTCTTTAAACACCATGTTATTACTCTTAATAAATCTACAAATATTTATTGAGCATCTATGATATGCTTGGTGCTGTT AGGCACTGTGTTTTTAAAGCACAAACTCTCAAAAGCTGATTCCAGCGTAATGTTTTATTTTTGTTTTTCTGTGTTTTTTATGACAAAGTC TGTCTGATAGACAAAGCCTGGAAGGTTTCCCCCAGGGCTTTAGAATTTAGAATTAGCTGGTTTTCATTTCAAATGGGAAATTAATGGAGA AATGAGATAAAATCATCTCTGTGTAAATGCTTGAACCCACAGAAAGTTTTCTAAATATGGACTAATTGTGGGTTTGTGCATATTTCTGTG TCTCCTCTTTTCACTTCACACCCACCATGATATAAAAAGATGCATCAGAGAGTGAGCCTGCCTTCAGGACCTGAAAGGACATGACTGAAC ATCTAGTAGATCTGGTGGAAATTAATGTTATACAAAAGACACGTAGACTAAGTTGACCCTGGGAGAGGAGTTAATACATTCCTTTGCAAA GTGACATGTGCCCTTTTTTTGACAGTCTGGCTTTCATGGTATGAGATGAGGACTCACAGGCCTTGGGTAATTTCTGCTTTTGTATGAATT TTTTCAGATGGTTCTGAGCTGGTTATGTCCCTGGAGGGGAATTTTTCATTTGCCTTAGATGTTCTTCCCATGAGTAGGTACATGAGTGAA GTTTCTTACACTTTTAAAATTGCATTGGCAAATTTTCTTTTGCTTTATGAACCCCTGTTTTGTCATTATGATTTTTCACTTGTTTTAACA GTTTCAGATGTCACCTTGGAATAGCACTGTTTATTTTGGCCTTTTTATGATTGCTGATGATAGGTACAGTCTAAAGGCCAAAAGTTGCCA CTTCATTGTGATAACATTGTTGCAACATTCCTAATATATTAGAGAATGATGTAAAATAAGAATGTTAGAGAACATAGCACATTCTCATTC AGTTTATAAACAATATTTGAAAATTTCCAGTGAGAATTAAAAAAGGACTAGTGATGATATAGCAAACCTGGACCTGAAATTTGGGGGTGG GGGGTGGGGGGATATCTGTTTTGCAGAGAAAATTTACCAGCCTCCAGCAAAATCTCTGCATCTTGTACTCAATAGCAACCATTAGTATTG TCATTTAAAAAGAATGAATCAAAAATTCATACGTAATGGAATGAAAAGAGGAAAACTTTCTATTAAACACTGTCAAGAAAGACCCATTGC TATCTATCACCTATGAAATTAAACCTAAAAAAATTTTTTTTTATTGTAAAAGCGACTGCTCGTTGATGTCTGGAAGTGATCCAGACTTTG TTTCACTGTGATCCAAAAAGTTAGACATTCCTTCCATTTCTCAAGATTTGGTAACAATTTTTTTTTAAGTCAGCATTTCATATAATACAT AAAATTAAGACAAATTAACTTACTGATATGTGGCCAATATCAACCCTTCTCACCCAACCCAAACATGTTCTGGAGATAGAAGGACTTATC CTCAATTATATTCCAGTAAATTTATCTCCATAATCTGTTTTATCCCCTAATGTATGATATATCTCACCAAATTTTTCTAGAATTGAATAA AAGCAGTTTTTGCTTAACTTGAATTTCCTTCCACAAATACAACCTTCAGCTCTTCCCTCTCTGTTTCCCTTTTGCCCACATTGCAAATAG TCTTCATAATAGAACCCTCACTGCAACTTAAAAGGGTCCCATTTCTTAACTCAGCATTTCATATACCAAGAACACTTGCAAAGATTTCTT CATAATGTGATTTTTTAATTTTTCAGTTCCAGAAGCATTTCCTACAGTTCGAACGTTATTTTTTCTCTCAGATTTTCAACTTGAAGCTTT GATTTGCACTGAATTAACTTGGATAAAATTTTAGTTTCTCTCTTCAGCTAACAGATTTGGAAGCAAATTACAGTATACTTGAATAATTCA GGTACTACCTGTTGACCTGGAATTTTAGTGATTCTGGGAAAGTTTTCCAGACAAAGACACCAATAGAGTGAAGGGTTTTTTCCCCAATTA CTATTTTATTGTTTTTTAAAATGCCTTTTTAAAACTTGTGTGATGTGGCAAAATAGTCATATGTTCAATTAATTTATATTTTATTCATTC >6734_6734_2_ARNT-CBLB_ARNT_chr1_150849019_ENST00000358595_CBLB_chr3_105439094_ENST00000264122_length(amino acids)=645AA_BP=64 MLGAAEAAILDSAVAEAAVRRRFWGVAFLFPSLPVRWRRLLPLGGGVARRRWHLRPWRRLLPTPESDGQGCPFCRCEIKGTEPIIVDPFD PRDEGSRCCSIIDPFGMPMLDLDDDDDREESLMMNRLANVRKCTDRQNSPVTSPGSSPLAQRRKPQPDPLQIPHLSLPPVPPRLDLIQKG IVRSPCGSPTGSPKSSPCMVRKQDKPLPAPPPPLRDPPPPPPERPPPIPPDNRLSRHIHHVESVPSRDPPMPLEAWCPRDVFGTNQLVGC RLLGEGSPKPGITASSNVNGRHSRVGSDPVLMRKHRRHDLPLEGAKVFSNGHLGSEEYDVPPRLSPPPPVTTLLPSIKCTGPLANSLSEK TRDPVEEDDDEYKIPSSHPVSLNSQPSHCHNVKPPVRSCDNGHCMLNGTHGPSSEKKSNIPDLSIYLKGDVFDSASDPVPLPPARPPTRD NPKHGSSLNRTPSDYDLLIPPLGEDAFDALPPSLPPPPPPARHSLIEHSKPPGSSSRPSSGQDLFLLPSDPFVDLASGQVPLPPARRLPG ENVKTNRTSQDYDQLPSCSDGSQAPARPPKPRPRRTAPEIHHRKPHGPEAALENVDAKIAKLMGEGYAFEEVKRALEIAQNNVEVARSIL -------------------------------------------------------------- >6734_6734_3_ARNT-CBLB_ARNT_chr1_150849019_ENST00000505755_CBLB_chr3_105439094_ENST00000264122_length(transcript)=5322nt_BP=67nt ACTGGGGGGGGGGGTGGCGCGGCGGCGGTGGCATCTGCGGCCATGGCGGCGACTACTGCCAACCCCGGAGTCGGATGGTCAGGGCTGCCC TTTCTGTCGTTGTGAAATAAAAGGAACTGAGCCCATAATCGTGGACCCCTTTGATCCAAGAGATGAAGGCTCCAGGTGTTGCAGCATCAT TGACCCCTTTGGCATGCCGATGCTAGACTTGGACGACGATGATGATCGTGAGGAGTCCTTGATGATGAATCGGTTGGCAAACGTCCGAAA GTGCACTGACAGGCAGAACTCACCAGTCACATCACCAGGATCCTCTCCCCTTGCCCAGAGAAGAAAGCCACAGCCTGACCCACTCCAGAT CCCACATCTAAGCCTGCCACCCGTGCCTCCTCGCCTGGATCTAATTCAGAAAGGCATAGTTAGATCTCCCTGTGGCAGCCCAACGGGTTC ACCAAAGTCTTCTCCTTGCATGGTGAGAAAACAAGATAAACCACTCCCAGCACCACCTCCTCCCTTAAGAGATCCTCCTCCACCGCCACC TGAAAGACCTCCACCAATCCCACCAGACAATAGACTGAGTAGACACATCCATCATGTGGAAAGCGTGCCTTCCAGAGACCCGCCAATGCC TCTTGAAGCATGGTGCCCTCGGGATGTGTTTGGGACTAATCAGCTTGTGGGATGTCGACTCCTAGGGGAGGGCTCTCCAAAACCTGGAAT CACAGCGAGTTCAAATGTCAATGGAAGGCACAGTAGAGTGGGCTCTGACCCAGTGCTTATGCGGAAACACAGACGCCATGATTTGCCTTT AGAAGGAGCTAAGGTCTTTTCCAATGGTCACCTTGGAAGTGAAGAATATGATGTTCCTCCCCGGCTTTCTCCTCCTCCTCCAGTTACCAC CCTCCTCCCTAGCATAAAGTGTACTGGTCCGTTAGCAAATTCTCTTTCAGAGAAAACAAGAGACCCAGTAGAGGAAGATGATGATGAATA CAAGATTCCTTCATCCCACCCTGTTTCCCTGAATTCACAACCATCTCATTGTCATAATGTAAAACCTCCTGTTCGGTCTTGTGATAATGG TCACTGTATGCTGAATGGAACACATGGTCCATCTTCAGAGAAGAAATCAAACATCCCTGACTTAAGCATATATTTAAAGGGAGATGTTTT TGATTCAGCCTCTGATCCCGTGCCATTACCACCTGCCAGGCCTCCAACTCGGGACAATCCAAAGCATGGTTCTTCACTCAACAGGACGCC CTCTGATTATGATCTTCTCATCCCTCCATTAGGTGAAGATGCTTTTGATGCCCTCCCTCCATCTCTCCCACCTCCCCCACCTCCTGCAAG GCATAGTCTCATTGAACATTCAAAACCTCCTGGCTCCAGTAGCCGGCCATCCTCAGGACAGGATCTTTTTCTTCTTCCTTCAGATCCCTT TGTTGATCTAGCAAGTGGCCAAGTTCCTTTGCCTCCTGCTAGAAGGTTACCAGGTGAAAATGTCAAAACTAACAGAACATCACAGGACTA TGATCAGCTTCCTTCATGTTCAGATGGTTCACAGGCACCAGCCAGACCCCCTAAACCACGACCGCGCAGGACTGCACCAGAAATTCACCA CAGAAAACCCCATGGGCCTGAGGCGGCATTGGAAAATGTCGATGCAAAAATTGCAAAACTCATGGGAGAGGGTTATGCCTTTGAAGAGGT GAAGAGAGCCTTAGAGATAGCCCAGAATAATGTCGAAGTTGCCCGGAGCATCCTCCGAGAATTTGCCTTCCCTCCTCCAGTATCCCCACG TCTAAATCTATAGCAGCCAGAACTGTAGACACCAAAATGGAAAGCAATCGATGTATTCCAAGAGTGTGGAAATAAAGAGAACTGAGATGG AATTCAAGAGAGAAGTGTCTCCTCCTCGTGTAGCAGCTTGAGAAGAGGCTTGGGAGTGCAGCTTCTCAAAGGAGACCGATGCTTGCTCAG GATGTCGACAGCTGTGGCTTCCTTGTTTTTGCTAGCCATATTTTTAAATCAGGGTTGAACTGACAAAAATAATTTAAAGACGTTTACTTC CCTTGAACTTTGAACCTGTGAAATGCTTTACCTTGTTTACAGTTTGGCAAAGTTGCAGTTTGTTCTTGTTTTTAGTTTAGTTTTGTTTTG GTGTTTTGATACCTGTACTGTGTTCTTCACAGACCCTTTGTAGCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCC ACATCAACAGCTAAATCATTTATTCATATGGATCTCTACCATCCCCATGCCTTGCCCAGGTCCAGTTCCATTTCTCTCATTCACAAGATG CTTTGAAGGTTCTGATTTTCAACTGATCAAACTAATGCAAAAAAAAAAAAGTATGTATTCTTCACTACTGAGTTTCTTCTTTGGAAACCA TCACTATTGAGAGATGGGAAAAACCTGAATGTATAAAGCATTTATTTGTCAATAAACTGCCTTTTGTAAGGGGTTTTCACATAACATAGA GGAGCTTCCCTTTTTTGTTTAAGTTTTGTAACCTTTAATCCTCCATATTCTCATGTCTGTCATCCCAGGGGTGTCACAACTGTAAAAATC TACAATATTAGAAAGCAGCTACTACAGATGTGGAAGAGAGAACACTTGTATAAGACAATGCTGTACTGAAGTTATATAACAAGGTCCCCT GATACTTATGCCTGCATTACTTTGAGGGATGCTGAATGAGAGGACCATCTCCCTGAAATATATTAATAATTTTCAGATAAAATTATGAAC ATAACATACCTTTTCTCAAGTGGAATTAGAGTTCATTTCCCATTTAAGTGATTACACTCTATCTCCTAAGAGCTGTGGGAACCAGTTCAT ATTGCAGTGGAAACATTAACTCTTCGTTGCACTGTTGAGTGTCAAGGCTACTGTGGCAATGTTTTTTGCAAAGTTCTCAGTAATTTTCTC TCTGCAATCAAATTAGAGTTCATATTTAATTTGCAGATTCTCTCATTCATTGCTCCACACTGCTTTATCAAATCAGGTGAAAGAAATTAA TGTAGTTTTGCCTATTTTACAAAATGGTGGTTGGTTCTTTAAACACCATGTTATTACTCTTAATAAATCTACAAATATTTATTGAGCATC TATGATATGCTTGGTGCTGTTAGGCACTGTGTTTTTAAAGCACAAACTCTCAAAAGCTGATTCCAGCGTAATGTTTTATTTTTGTTTTTC TGTGTTTTTTATGACAAAGTCTGTCTGATAGACAAAGCCTGGAAGGTTTCCCCCAGGGCTTTAGAATTTAGAATTAGCTGGTTTTCATTT CAAATGGGAAATTAATGGAGAAATGAGATAAAATCATCTCTGTGTAAATGCTTGAACCCACAGAAAGTTTTCTAAATATGGACTAATTGT GGGTTTGTGCATATTTCTGTGTCTCCTCTTTTCACTTCACACCCACCATGATATAAAAAGATGCATCAGAGAGTGAGCCTGCCTTCAGGA CCTGAAAGGACATGACTGAACATCTAGTAGATCTGGTGGAAATTAATGTTATACAAAAGACACGTAGACTAAGTTGACCCTGGGAGAGGA GTTAATACATTCCTTTGCAAAGTGACATGTGCCCTTTTTTTGACAGTCTGGCTTTCATGGTATGAGATGAGGACTCACAGGCCTTGGGTA ATTTCTGCTTTTGTATGAATTTTTTCAGATGGTTCTGAGCTGGTTATGTCCCTGGAGGGGAATTTTTCATTTGCCTTAGATGTTCTTCCC ATGAGTAGGTACATGAGTGAAGTTTCTTACACTTTTAAAATTGCATTGGCAAATTTTCTTTTGCTTTATGAACCCCTGTTTTGTCATTAT GATTTTTCACTTGTTTTAACAGTTTCAGATGTCACCTTGGAATAGCACTGTTTATTTTGGCCTTTTTATGATTGCTGATGATAGGTACAG TCTAAAGGCCAAAAGTTGCCACTTCATTGTGATAACATTGTTGCAACATTCCTAATATATTAGAGAATGATGTAAAATAAGAATGTTAGA GAACATAGCACATTCTCATTCAGTTTATAAACAATATTTGAAAATTTCCAGTGAGAATTAAAAAAGGACTAGTGATGATATAGCAAACCT GGACCTGAAATTTGGGGGTGGGGGGTGGGGGGATATCTGTTTTGCAGAGAAAATTTACCAGCCTCCAGCAAAATCTCTGCATCTTGTACT CAATAGCAACCATTAGTATTGTCATTTAAAAAGAATGAATCAAAAATTCATACGTAATGGAATGAAAAGAGGAAAACTTTCTATTAAACA CTGTCAAGAAAGACCCATTGCTATCTATCACCTATGAAATTAAACCTAAAAAAATTTTTTTTTATTGTAAAAGCGACTGCTCGTTGATGT CTGGAAGTGATCCAGACTTTGTTTCACTGTGATCCAAAAAGTTAGACATTCCTTCCATTTCTCAAGATTTGGTAACAATTTTTTTTTAAG TCAGCATTTCATATAATACATAAAATTAAGACAAATTAACTTACTGATATGTGGCCAATATCAACCCTTCTCACCCAACCCAAACATGTT CTGGAGATAGAAGGACTTATCCTCAATTATATTCCAGTAAATTTATCTCCATAATCTGTTTTATCCCCTAATGTATGATATATCTCACCA AATTTTTCTAGAATTGAATAAAAGCAGTTTTTGCTTAACTTGAATTTCCTTCCACAAATACAACCTTCAGCTCTTCCCTCTCTGTTTCCC TTTTGCCCACATTGCAAATAGTCTTCATAATAGAACCCTCACTGCAACTTAAAAGGGTCCCATTTCTTAACTCAGCATTTCATATACCAA GAACACTTGCAAAGATTTCTTCATAATGTGATTTTTTAATTTTTCAGTTCCAGAAGCATTTCCTACAGTTCGAACGTTATTTTTTCTCTC AGATTTTCAACTTGAAGCTTTGATTTGCACTGAATTAACTTGGATAAAATTTTAGTTTCTCTCTTCAGCTAACAGATTTGGAAGCAAATT ACAGTATACTTGAATAATTCAGGTACTACCTGTTGACCTGGAATTTTAGTGATTCTGGGAAAGTTTTCCAGACAAAGACACCAATAGAGT GAAGGGTTTTTTCCCCAATTACTATTTTATTGTTTTTTAAAATGCCTTTTTAAAACTTGTGTGATGTGGCAAAATAGTCATATGTTCAAT TAATTTATATTTTATTCATTCCTTTTCAATTCTGGTTATTATGTAACCTCAAGTACTTTATCTGTTCTTTTAAAGTATTTTATAAAATGA >6734_6734_3_ARNT-CBLB_ARNT_chr1_150849019_ENST00000505755_CBLB_chr3_105439094_ENST00000264122_length(amino acids)=603AA_BP=22 LGGGVARRRWHLRPWRRLLPTPESDGQGCPFCRCEIKGTEPIIVDPFDPRDEGSRCCSIIDPFGMPMLDLDDDDDREESLMMNRLANVRK CTDRQNSPVTSPGSSPLAQRRKPQPDPLQIPHLSLPPVPPRLDLIQKGIVRSPCGSPTGSPKSSPCMVRKQDKPLPAPPPPLRDPPPPPP ERPPPIPPDNRLSRHIHHVESVPSRDPPMPLEAWCPRDVFGTNQLVGCRLLGEGSPKPGITASSNVNGRHSRVGSDPVLMRKHRRHDLPL EGAKVFSNGHLGSEEYDVPPRLSPPPPVTTLLPSIKCTGPLANSLSEKTRDPVEEDDDEYKIPSSHPVSLNSQPSHCHNVKPPVRSCDNG HCMLNGTHGPSSEKKSNIPDLSIYLKGDVFDSASDPVPLPPARPPTRDNPKHGSSLNRTPSDYDLLIPPLGEDAFDALPPSLPPPPPPAR HSLIEHSKPPGSSSRPSSGQDLFLLPSDPFVDLASGQVPLPPARRLPGENVKTNRTSQDYDQLPSCSDGSQAPARPPKPRPRRTAPEIHH -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ARNT-CBLB |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000264122 | 8 | 19 | 891_927 | 401.0 | 983.0 | SH3KBP1 | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000403724 | 8 | 15 | 891_927 | 401.0 | 771.0 | SH3KBP1 | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000264122 | 8 | 19 | 543_568 | 401.0 | 983.0 | VAV1 | |
Tgene | CBLB | chr1:150849019 | chr3:105439094 | ENST00000403724 | 8 | 15 | 543_568 | 401.0 | 771.0 | VAV1 |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ARNT-CBLB |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ARNT-CBLB |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |