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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:PPP3CC-TNFRSF10A (FusionGDB2 ID:68158)

Fusion Gene Summary for PPP3CC-TNFRSF10A

check button Fusion gene summary
Fusion gene informationFusion gene name: PPP3CC-TNFRSF10A
Fusion gene ID: 68158
HgeneTgene
Gene symbol

PPP3CC

TNFRSF10A

Gene ID

5533

8797

Gene nameprotein phosphatase 3 catalytic subunit gammaTNF receptor superfamily member 10a
SynonymsCALNA3|CNA3|PP2BgammaAPO2|CD261|DR4|TRAILR-1|TRAILR1
Cytomap

8p21.3

8p21.3

Type of geneprotein-codingprotein-coding
Descriptionserine/threonine-protein phosphatase 2B catalytic subunit gamma isoformCAM-PRP catalytic subunitcalcineurin, testis-specific catalytic subunitcalmodulin-dependent calcineurin A subunit gamma isoformprotein phosphatase 2B, catalytic subunit, gamma isoftumor necrosis factor receptor superfamily member 10ATNF-related apoptosis-inducing ligand receptor 1TRAIL receptor 1TRAIL-R1cytotoxic TRAIL receptordeath receptor 4tumor necrosis factor receptor superfamily member 10a variant 2tumor necrosis facto
Modification date2020031320200329
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000240139, ENST00000289963, 
ENST00000397775, ENST00000518852, 
ENST00000221132, 
Fusion gene scores* DoF score12 X 11 X 7=9242 X 2 X 2=8
# samples 202
** MAII scorelog2(20/924*10)=-2.20789285164133
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(2/8*10)=1.32192809488736
Context

PubMed: PPP3CC [Title/Abstract] AND TNFRSF10A [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointPPP3CC(22333137)-TNFRSF10A(23069725), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgenePPP3CC

GO:0006470

protein dephosphorylation

19154138

HgenePPP3CC

GO:0033173

calcineurin-NFAT signaling cascade

19154138

TgeneTNFRSF10A

GO:0036462

TRAIL-activated apoptotic signaling pathway

21785459

TgeneTNFRSF10A

GO:0097191

extrinsic apoptotic signaling pathway

21785459


check buttonFusion gene breakpoints across PPP3CC (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across TNFRSF10A (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4ESCATCGA-LN-A49KPPP3CCchr8

22333137

+TNFRSF10Achr8

23069725

-


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Fusion Gene ORF analysis for PPP3CC-TNFRSF10A

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000240139ENST00000221132PPP3CCchr8

22333137

+TNFRSF10Achr8

23069725

-
In-frameENST00000289963ENST00000221132PPP3CCchr8

22333137

+TNFRSF10Achr8

23069725

-
In-frameENST00000397775ENST00000221132PPP3CCchr8

22333137

+TNFRSF10Achr8

23069725

-
In-frameENST00000518852ENST00000221132PPP3CCchr8

22333137

+TNFRSF10Achr8

23069725

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000518852PPP3CCchr822333137+ENST00000221132TNFRSF10Achr823069725-33069635702063497
ENST00000240139PPP3CCchr822333137+ENST00000221132TNFRSF10Achr823069725-30426993061799497
ENST00000289963PPP3CCchr822333137+ENST00000221132TNFRSF10Achr823069725-30016582651758497
ENST00000397775PPP3CCchr822333137+ENST00000221132TNFRSF10Achr823069725-29896462531746497

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000518852ENST00000221132PPP3CCchr822333137+TNFRSF10Achr823069725-0.0006122530.99938774
ENST00000240139ENST00000221132PPP3CCchr822333137+TNFRSF10Achr823069725-0.0004508580.9995491
ENST00000289963ENST00000221132PPP3CCchr822333137+TNFRSF10Achr823069725-0.0004326360.99956733
ENST00000397775ENST00000221132PPP3CCchr822333137+TNFRSF10Achr823069725-0.0004096390.99959034

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Fusion Genomic Features for PPP3CC-TNFRSF10A


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for PPP3CC-TNFRSF10A


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr8:22333137/chr8:23069725)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneTNFRSF10Achr8:22333137chr8:23069725ENST00000221132010365_448102469.0DomainDeath
TgeneTNFRSF10Achr8:22333137chr8:23069725ENST00000221132010107_145102469.0RepeatNote=TNFR-Cys 1
TgeneTNFRSF10Achr8:22333137chr8:23069725ENST00000221132010147_188102469.0RepeatNote=TNFR-Cys 2
TgeneTNFRSF10Achr8:22333137chr8:23069725ENST00000221132010189_229102469.0RepeatNote=TNFR-Cys 3
TgeneTNFRSF10Achr8:22333137chr8:23069725ENST00000221132010263_468102469.0Topological domainCytoplasmic
TgeneTNFRSF10Achr8:22333137chr8:23069725ENST00000221132010240_262102469.0TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgenePPP3CCchr8:22333137chr8:23069725ENST00000240139+314303_307124513.0MotifSAPNY motif
HgenePPP3CCchr8:22333137chr8:23069725ENST00000289963+313303_307124503.0MotifSAPNY motif
HgenePPP3CCchr8:22333137chr8:23069725ENST00000397775+315303_307124522.0MotifSAPNY motif
HgenePPP3CCchr8:22333137chr8:23069725ENST00000240139+314344_366124513.0RegionCalcineurin B binding
HgenePPP3CCchr8:22333137chr8:23069725ENST00000240139+314386_400124513.0RegionCalmodulin-binding
HgenePPP3CCchr8:22333137chr8:23069725ENST00000240139+314401_408124513.0RegionAutoinhibitory segment
HgenePPP3CCchr8:22333137chr8:23069725ENST00000240139+314459_481124513.0RegionAutoinhibitory domain
HgenePPP3CCchr8:22333137chr8:23069725ENST00000240139+31452_343124513.0RegionCatalytic
HgenePPP3CCchr8:22333137chr8:23069725ENST00000289963+313344_366124503.0RegionCalcineurin B binding
HgenePPP3CCchr8:22333137chr8:23069725ENST00000289963+313386_400124503.0RegionCalmodulin-binding
HgenePPP3CCchr8:22333137chr8:23069725ENST00000289963+313401_408124503.0RegionAutoinhibitory segment
HgenePPP3CCchr8:22333137chr8:23069725ENST00000289963+313459_481124503.0RegionAutoinhibitory domain
HgenePPP3CCchr8:22333137chr8:23069725ENST00000289963+31352_343124503.0RegionCatalytic
HgenePPP3CCchr8:22333137chr8:23069725ENST00000397775+315344_366124522.0RegionCalcineurin B binding
HgenePPP3CCchr8:22333137chr8:23069725ENST00000397775+315386_400124522.0RegionCalmodulin-binding
HgenePPP3CCchr8:22333137chr8:23069725ENST00000397775+315401_408124522.0RegionAutoinhibitory segment
HgenePPP3CCchr8:22333137chr8:23069725ENST00000397775+315459_481124522.0RegionAutoinhibitory domain
HgenePPP3CCchr8:22333137chr8:23069725ENST00000397775+31552_343124522.0RegionCatalytic
TgeneTNFRSF10Achr8:22333137chr8:23069725ENST0000022113201029_32102469.0Compositional biasNote=Poly-Ala
TgeneTNFRSF10Achr8:22333137chr8:23069725ENST0000022113201024_239102469.0Topological domainExtracellular


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Fusion Gene Sequence for PPP3CC-TNFRSF10A


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>68158_68158_1_PPP3CC-TNFRSF10A_PPP3CC_chr8_22333137_ENST00000240139_TNFRSF10A_chr8_23069725_ENST00000221132_length(transcript)=3042nt_BP=699nt
CACGAGGGCCCGGGCCGCGAGCAGCCGCGGCCGTCCCGGTCGCCACCCTTAGCAGCGGTCGCGGTCGGTGCCGAAGCGGTGTTCCCCGCC
TTAGCCGCTGGCGCCTCCCAAGAGAGCGGCCGGTGGGCCCTCGTCCTGTCAGTGGCGTCGGAGGCCGGCGCTGCGGTGGCCGCGCCCTTC
TGGTGCTCGGACACCGCTGAGGAGCCGGGGCCGGGCACGGCTGGCTGACGGCTCCGGGCAGCTAAGGCTGCCCGAGGAGAAGGCGGCGGC
CGCGGCGTAGGCGCACGTCCGGCGGGCTCCTGGAGCCTGGAGGAGGCCGAGGGGACCATGTCCGGGAGGCGCTTCCACCTCTCCACCACC
GACCGCGTCATCAAAGCTGTCCCCTTTCCTCCAACCCAACGGCTTACTTTCAAGGAAGTATTTGAGAATGGGAAACCTAAAGTTGATGTT
TTAAAAAACCATTTGGTAAAGGAAGGACGACTGGAAGAGGAAGTAGCCTTAAAGATAATCAATGATGGGGCTGCCATCCTGAGGCAAGAG
AAGACTATGATAGAAGTAGATGCTCCAATCACAGTATGTGGTGATATTCATGGACAATTCTTTGACCTAATGAAGTTATTTGAAGTTGGA
GGATCACCTAGTAACACACGCTACCTCTTTCTGGGTGACTATGTGGACAGAGGCTATTTCAGTATAGAGGTCGTACCTAGCTCAGCTGCA
ACCATCAAACTTCATGATCAATCAATTGGCACACAGCAATGGGAACATAGCCCTTTGGGAGAGTTGTGTCCACCAGGATCTCATAGATCA
GAACATCCTGGAGCCTGTAACCGGTGCACAGAGGGTGTGGGTTACACCAATGCTTCCAACAATTTGTTTGCTTGCCTCCCATGTACAGCT
TGTAAATCAGATGAAGAAGAGAGAAGTCCCTGCACCACGACCAGGAACACAGCATGTCAGTGCAAACCAGGAACTTTCCGGAATGACAAT
TCTGCTGAGATGTGCCGGAAGTGCAGCAGAGGGTGCCCCAGAGGGATGGTCAAGGTCAAGGATTGTACGCCCTGGAGTGACATCGAGTGT
GTCCACAAAGAATCAGGCAATGGACATAATATATGGGTGATTTTGGTTGTGACTTTGGTTGTTCCGTTGCTGTTGGTGGCTGTGCTGATT
GTCTGTTGTTGCATCGGCTCAGGTTGTGGAGGGGACCCCAAGTGCATGGACAGGGTGTGTTTCTGGCGCTTGGGTCTCCTACGAGGGCCT
GGGGCTGAGGACAATGCTCACAACGAGATTCTGAGCAACGCAGACTCGCTGTCCACTTTCGTCTCTGAGCAGCAAATGGAAAGCCAGGAG
CCGGCAGATTTGACAGGTGTCACTGTACAGTCCCCAGGGGAGGCACAGTGTCTGCTGGGACCGGCAGAAGCTGAAGGGTCTCAGAGGAGG
AGGCTGCTGGTTCCAGCAAATGGTGCTGACCCCACTGAGACTCTGATGCTGTTCTTTGACAAGTTTGCAAACATCGTGCCCTTTGACTCC
TGGGACCAGCTCATGAGGCAGCTGGACCTCACGAAAAATGAGATCGATGTGGTCAGAGCTGGTACAGCAGGCCCAGGGGATGCCTTGTAT
GCAATGCTGATGAAATGGGTCAACAAAACTGGACGGAACGCCTCGATCCACACCCTGCTGGATGCCTTGGAGAGGATGGAAGAGAGACAT
GCAAGAGAGAAGATTCAGGACCTCTTGGTGGACTCTGGAAAGTTCATCTACTTAGAAGATGGCACAGGCTCTGCCGTGTCCTTGGAGTGA
AAGACTCTTTTTACCAGAGGTTTCCTCTTAGGTGTTAGGAGTTAATACATATTAGGTTTTTTTTTTTTTTAACATGTATACAAAGTAAAT
TCTTAGCCAGGTGTAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGTGGATCACTTGAGGTCAGAAGTTCAAGACC
AGCCTGACCAACATCGTGAAATGCCGTCTTTACAAAAAAATACAAAAATTAACTGGATGTGATGGTGTGTGCATATATTCTCGGCTACTC
GGGAGGCTGAGGCAGGAGAATCACTTGAACCCACGAGGCAGTGAGCTGAGATTGCACCACTGCACTCCAGCCTGGGACACAGAGCAAGAC
TCTGTCTCAAGATAAAATAAAATAAACTTGAAAGAATTATTGCCCGACTGAGGCTCACATGCCAAAGGAAAATCTGGTTCTCCCCTGAGC
TGGCCTCCGTGTGTTTCCTTATCATGGTGGTCAATTGGAGGTGTTAATTTGAATGGATTAAGGAACACCTAGAACACTGGTAAGGCATTA
TTTCTGGGACATTATTTCTGGGCATGTCTTCGAGGGTGTTTCCAGAGGGGATTGGCATGCGATCGGGTGGACTGAGTGGAAAAGACCTAC
CCTTAATTTGGGGGGGCACCGTCCGACAGACTGGGGAGCAAGATAGAAGAAAACAAAAAAAAAAGGAAAAGCAAATCCATCTGATCTCCT
GGAGCTGGGACACTCTTCTGCCTGTGGACATCAGAGTCTAGGATTTCTAGCCCTTGGACTCCAGGGCATACACCAGTGGCCTCCCGAAGG
ATCTAAGGATTTTGGCCTTGAACTAAGAATTACACCATCGGCTTCCCTGGGTCTTAGGTTTTTGGGCTGGATTAAGTCCTGCTTCCAGCA
TTTCAGGGTCTCTGCTGTGCAGATGGCCTGTTGTGGAACTTCTCAACCTCCATTATCAGATGCATTAATTCCTCCAATAAGTCCCATTTC
ATATATAGTCATTTACCCCACAACATTTCAGTCAAGGGAACAGCATATAAGATGGTGGCCGTCCAGTAAGCTAAGGTTAATTTATTAATT
ATTTAATTTATTTACCTTGAGTTCAAGTCACAATTAAAGTACATATACCTTTGGAAATTTGGACTTTTGTATATAAAAGTACTTTTTTTT

>68158_68158_1_PPP3CC-TNFRSF10A_PPP3CC_chr8_22333137_ENST00000240139_TNFRSF10A_chr8_23069725_ENST00000221132_length(amino acids)=497AA_BP=307
MEEAEGTMSGRRFHLSTTDRVIKAVPFPPTQRLTFKEVFENGKPKVDVLKNHLVKEGRLEEEVALKIINDGAAILRQEKTMIEVDAPITV
CGDIHGQFFDLMKLFEVGGSPSNTRYLFLGDYVDRGYFSIEVVPSSAATIKLHDQSIGTQQWEHSPLGELCPPGSHRSEHPGACNRCTEG
VGYTNASNNLFACLPCTACKSDEEERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIECVHKESGNGHNIW
VILVVTLVVPLLLVAVLIVCCCIGSGCGGDPKCMDRVCFWRLGLLRGPGAEDNAHNEILSNADSLSTFVSEQQMESQEPADLTGVTVQSP
GEAQCLLGPAEAEGSQRRRLLVPANGADPTETLMLFFDKFANIVPFDSWDQLMRQLDLTKNEIDVVRAGTAGPGDALYAMLMKWVNKTGR

--------------------------------------------------------------
>68158_68158_2_PPP3CC-TNFRSF10A_PPP3CC_chr8_22333137_ENST00000289963_TNFRSF10A_chr8_23069725_ENST00000221132_length(transcript)=3001nt_BP=658nt
GCCACCCTTAGCAGCGGTCGCGGTCGGTGCCGAAGCGGTGTTCCCCGCCTTAGCCGCTGGCGCCTCCCAAGAGAGCGGCCGGTGGGCCCT
CGTCCTGTCAGTGGCGTCGGAGGCCGGCGCTGCGGTGGCCGCGCCCTTCTGGTGCTCGGACACCGCTGAGGAGCCGGGGCCGGGCACGGC
TGGCTGACGGCTCCGGGCAGCTAAGGCTGCCCGAGGAGAAGGCGGCGGCCGCGGCGTAGGCGCACGTCCGGCGGGCTCCTGGAGCCTGGA
GGAGGCCGAGGGGACCATGTCCGGGAGGCGCTTCCACCTCTCCACCACCGACCGCGTCATCAAAGCTGTCCCCTTTCCTCCAACCCAACG
GCTTACTTTCAAGGAAGTATTTGAGAATGGGAAACCTAAAGTTGATGTTTTAAAAAACCATTTGGTAAAGGAAGGACGACTGGAAGAGGA
AGTAGCCTTAAAGATAATCAATGATGGGGCTGCCATCCTGAGGCAAGAGAAGACTATGATAGAAGTAGATGCTCCAATCACAGTATGTGG
TGATATTCATGGACAATTCTTTGACCTAATGAAGTTATTTGAAGTTGGAGGATCACCTAGTAACACACGCTACCTCTTTCTGGGTGACTA
TGTGGACAGAGGCTATTTCAGTATAGAGGTCGTACCTAGCTCAGCTGCAACCATCAAACTTCATGATCAATCAATTGGCACACAGCAATG
GGAACATAGCCCTTTGGGAGAGTTGTGTCCACCAGGATCTCATAGATCAGAACATCCTGGAGCCTGTAACCGGTGCACAGAGGGTGTGGG
TTACACCAATGCTTCCAACAATTTGTTTGCTTGCCTCCCATGTACAGCTTGTAAATCAGATGAAGAAGAGAGAAGTCCCTGCACCACGAC
CAGGAACACAGCATGTCAGTGCAAACCAGGAACTTTCCGGAATGACAATTCTGCTGAGATGTGCCGGAAGTGCAGCAGAGGGTGCCCCAG
AGGGATGGTCAAGGTCAAGGATTGTACGCCCTGGAGTGACATCGAGTGTGTCCACAAAGAATCAGGCAATGGACATAATATATGGGTGAT
TTTGGTTGTGACTTTGGTTGTTCCGTTGCTGTTGGTGGCTGTGCTGATTGTCTGTTGTTGCATCGGCTCAGGTTGTGGAGGGGACCCCAA
GTGCATGGACAGGGTGTGTTTCTGGCGCTTGGGTCTCCTACGAGGGCCTGGGGCTGAGGACAATGCTCACAACGAGATTCTGAGCAACGC
AGACTCGCTGTCCACTTTCGTCTCTGAGCAGCAAATGGAAAGCCAGGAGCCGGCAGATTTGACAGGTGTCACTGTACAGTCCCCAGGGGA
GGCACAGTGTCTGCTGGGACCGGCAGAAGCTGAAGGGTCTCAGAGGAGGAGGCTGCTGGTTCCAGCAAATGGTGCTGACCCCACTGAGAC
TCTGATGCTGTTCTTTGACAAGTTTGCAAACATCGTGCCCTTTGACTCCTGGGACCAGCTCATGAGGCAGCTGGACCTCACGAAAAATGA
GATCGATGTGGTCAGAGCTGGTACAGCAGGCCCAGGGGATGCCTTGTATGCAATGCTGATGAAATGGGTCAACAAAACTGGACGGAACGC
CTCGATCCACACCCTGCTGGATGCCTTGGAGAGGATGGAAGAGAGACATGCAAGAGAGAAGATTCAGGACCTCTTGGTGGACTCTGGAAA
GTTCATCTACTTAGAAGATGGCACAGGCTCTGCCGTGTCCTTGGAGTGAAAGACTCTTTTTACCAGAGGTTTCCTCTTAGGTGTTAGGAG
TTAATACATATTAGGTTTTTTTTTTTTTTAACATGTATACAAAGTAAATTCTTAGCCAGGTGTAGTGGCTCATGCCTGTAATCCCAGCAC
TTTGGGAGGCTGAGGCGGGTGGATCACTTGAGGTCAGAAGTTCAAGACCAGCCTGACCAACATCGTGAAATGCCGTCTTTACAAAAAAAT
ACAAAAATTAACTGGATGTGATGGTGTGTGCATATATTCTCGGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCACGAGGCAG
TGAGCTGAGATTGCACCACTGCACTCCAGCCTGGGACACAGAGCAAGACTCTGTCTCAAGATAAAATAAAATAAACTTGAAAGAATTATT
GCCCGACTGAGGCTCACATGCCAAAGGAAAATCTGGTTCTCCCCTGAGCTGGCCTCCGTGTGTTTCCTTATCATGGTGGTCAATTGGAGG
TGTTAATTTGAATGGATTAAGGAACACCTAGAACACTGGTAAGGCATTATTTCTGGGACATTATTTCTGGGCATGTCTTCGAGGGTGTTT
CCAGAGGGGATTGGCATGCGATCGGGTGGACTGAGTGGAAAAGACCTACCCTTAATTTGGGGGGGCACCGTCCGACAGACTGGGGAGCAA
GATAGAAGAAAACAAAAAAAAAAGGAAAAGCAAATCCATCTGATCTCCTGGAGCTGGGACACTCTTCTGCCTGTGGACATCAGAGTCTAG
GATTTCTAGCCCTTGGACTCCAGGGCATACACCAGTGGCCTCCCGAAGGATCTAAGGATTTTGGCCTTGAACTAAGAATTACACCATCGG
CTTCCCTGGGTCTTAGGTTTTTGGGCTGGATTAAGTCCTGCTTCCAGCATTTCAGGGTCTCTGCTGTGCAGATGGCCTGTTGTGGAACTT
CTCAACCTCCATTATCAGATGCATTAATTCCTCCAATAAGTCCCATTTCATATATAGTCATTTACCCCACAACATTTCAGTCAAGGGAAC
AGCATATAAGATGGTGGCCGTCCAGTAAGCTAAGGTTAATTTATTAATTATTTAATTTATTTACCTTGAGTTCAAGTCACAATTAAAGTA
CATATACCTTTGGAAATTTGGACTTTTGTATATAAAAGTACTTTTTTTTGGCGGGGGCAGTGGGCAGCTCTCATCCTAAACAAATGTGTT

>68158_68158_2_PPP3CC-TNFRSF10A_PPP3CC_chr8_22333137_ENST00000289963_TNFRSF10A_chr8_23069725_ENST00000221132_length(amino acids)=497AA_BP=307
MEEAEGTMSGRRFHLSTTDRVIKAVPFPPTQRLTFKEVFENGKPKVDVLKNHLVKEGRLEEEVALKIINDGAAILRQEKTMIEVDAPITV
CGDIHGQFFDLMKLFEVGGSPSNTRYLFLGDYVDRGYFSIEVVPSSAATIKLHDQSIGTQQWEHSPLGELCPPGSHRSEHPGACNRCTEG
VGYTNASNNLFACLPCTACKSDEEERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIECVHKESGNGHNIW
VILVVTLVVPLLLVAVLIVCCCIGSGCGGDPKCMDRVCFWRLGLLRGPGAEDNAHNEILSNADSLSTFVSEQQMESQEPADLTGVTVQSP
GEAQCLLGPAEAEGSQRRRLLVPANGADPTETLMLFFDKFANIVPFDSWDQLMRQLDLTKNEIDVVRAGTAGPGDALYAMLMKWVNKTGR

--------------------------------------------------------------
>68158_68158_3_PPP3CC-TNFRSF10A_PPP3CC_chr8_22333137_ENST00000397775_TNFRSF10A_chr8_23069725_ENST00000221132_length(transcript)=2989nt_BP=646nt
AGCGGTCGCGGTCGGTGCCGAAGCGGTGTTCCCCGCCTTAGCCGCTGGCGCCTCCCAAGAGAGCGGCCGGTGGGCCCTCGTCCTGTCAGT
GGCGTCGGAGGCCGGCGCTGCGGTGGCCGCGCCCTTCTGGTGCTCGGACACCGCTGAGGAGCCGGGGCCGGGCACGGCTGGCTGACGGCT
CCGGGCAGCTAAGGCTGCCCGAGGAGAAGGCGGCGGCCGCGGCGTAGGCGCACGTCCGGCGGGCTCCTGGAGCCTGGAGGAGGCCGAGGG
GACCATGTCCGGGAGGCGCTTCCACCTCTCCACCACCGACCGCGTCATCAAAGCTGTCCCCTTTCCTCCAACCCAACGGCTTACTTTCAA
GGAAGTATTTGAGAATGGGAAACCTAAAGTTGATGTTTTAAAAAACCATTTGGTAAAGGAAGGACGACTGGAAGAGGAAGTAGCCTTAAA
GATAATCAATGATGGGGCTGCCATCCTGAGGCAAGAGAAGACTATGATAGAAGTAGATGCTCCAATCACAGTATGTGGTGATATTCATGG
ACAATTCTTTGACCTAATGAAGTTATTTGAAGTTGGAGGATCACCTAGTAACACACGCTACCTCTTTCTGGGTGACTATGTGGACAGAGG
CTATTTCAGTATAGAGGTCGTACCTAGCTCAGCTGCAACCATCAAACTTCATGATCAATCAATTGGCACACAGCAATGGGAACATAGCCC
TTTGGGAGAGTTGTGTCCACCAGGATCTCATAGATCAGAACATCCTGGAGCCTGTAACCGGTGCACAGAGGGTGTGGGTTACACCAATGC
TTCCAACAATTTGTTTGCTTGCCTCCCATGTACAGCTTGTAAATCAGATGAAGAAGAGAGAAGTCCCTGCACCACGACCAGGAACACAGC
ATGTCAGTGCAAACCAGGAACTTTCCGGAATGACAATTCTGCTGAGATGTGCCGGAAGTGCAGCAGAGGGTGCCCCAGAGGGATGGTCAA
GGTCAAGGATTGTACGCCCTGGAGTGACATCGAGTGTGTCCACAAAGAATCAGGCAATGGACATAATATATGGGTGATTTTGGTTGTGAC
TTTGGTTGTTCCGTTGCTGTTGGTGGCTGTGCTGATTGTCTGTTGTTGCATCGGCTCAGGTTGTGGAGGGGACCCCAAGTGCATGGACAG
GGTGTGTTTCTGGCGCTTGGGTCTCCTACGAGGGCCTGGGGCTGAGGACAATGCTCACAACGAGATTCTGAGCAACGCAGACTCGCTGTC
CACTTTCGTCTCTGAGCAGCAAATGGAAAGCCAGGAGCCGGCAGATTTGACAGGTGTCACTGTACAGTCCCCAGGGGAGGCACAGTGTCT
GCTGGGACCGGCAGAAGCTGAAGGGTCTCAGAGGAGGAGGCTGCTGGTTCCAGCAAATGGTGCTGACCCCACTGAGACTCTGATGCTGTT
CTTTGACAAGTTTGCAAACATCGTGCCCTTTGACTCCTGGGACCAGCTCATGAGGCAGCTGGACCTCACGAAAAATGAGATCGATGTGGT
CAGAGCTGGTACAGCAGGCCCAGGGGATGCCTTGTATGCAATGCTGATGAAATGGGTCAACAAAACTGGACGGAACGCCTCGATCCACAC
CCTGCTGGATGCCTTGGAGAGGATGGAAGAGAGACATGCAAGAGAGAAGATTCAGGACCTCTTGGTGGACTCTGGAAAGTTCATCTACTT
AGAAGATGGCACAGGCTCTGCCGTGTCCTTGGAGTGAAAGACTCTTTTTACCAGAGGTTTCCTCTTAGGTGTTAGGAGTTAATACATATT
AGGTTTTTTTTTTTTTTAACATGTATACAAAGTAAATTCTTAGCCAGGTGTAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTG
AGGCGGGTGGATCACTTGAGGTCAGAAGTTCAAGACCAGCCTGACCAACATCGTGAAATGCCGTCTTTACAAAAAAATACAAAAATTAAC
TGGATGTGATGGTGTGTGCATATATTCTCGGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCACGAGGCAGTGAGCTGAGATT
GCACCACTGCACTCCAGCCTGGGACACAGAGCAAGACTCTGTCTCAAGATAAAATAAAATAAACTTGAAAGAATTATTGCCCGACTGAGG
CTCACATGCCAAAGGAAAATCTGGTTCTCCCCTGAGCTGGCCTCCGTGTGTTTCCTTATCATGGTGGTCAATTGGAGGTGTTAATTTGAA
TGGATTAAGGAACACCTAGAACACTGGTAAGGCATTATTTCTGGGACATTATTTCTGGGCATGTCTTCGAGGGTGTTTCCAGAGGGGATT
GGCATGCGATCGGGTGGACTGAGTGGAAAAGACCTACCCTTAATTTGGGGGGGCACCGTCCGACAGACTGGGGAGCAAGATAGAAGAAAA
CAAAAAAAAAAGGAAAAGCAAATCCATCTGATCTCCTGGAGCTGGGACACTCTTCTGCCTGTGGACATCAGAGTCTAGGATTTCTAGCCC
TTGGACTCCAGGGCATACACCAGTGGCCTCCCGAAGGATCTAAGGATTTTGGCCTTGAACTAAGAATTACACCATCGGCTTCCCTGGGTC
TTAGGTTTTTGGGCTGGATTAAGTCCTGCTTCCAGCATTTCAGGGTCTCTGCTGTGCAGATGGCCTGTTGTGGAACTTCTCAACCTCCAT
TATCAGATGCATTAATTCCTCCAATAAGTCCCATTTCATATATAGTCATTTACCCCACAACATTTCAGTCAAGGGAACAGCATATAAGAT
GGTGGCCGTCCAGTAAGCTAAGGTTAATTTATTAATTATTTAATTTATTTACCTTGAGTTCAAGTCACAATTAAAGTACATATACCTTTG
GAAATTTGGACTTTTGTATATAAAAGTACTTTTTTTTGGCGGGGGCAGTGGGCAGCTCTCATCCTAAACAAATGTGTTATTTGGTACCTA

>68158_68158_3_PPP3CC-TNFRSF10A_PPP3CC_chr8_22333137_ENST00000397775_TNFRSF10A_chr8_23069725_ENST00000221132_length(amino acids)=497AA_BP=307
MEEAEGTMSGRRFHLSTTDRVIKAVPFPPTQRLTFKEVFENGKPKVDVLKNHLVKEGRLEEEVALKIINDGAAILRQEKTMIEVDAPITV
CGDIHGQFFDLMKLFEVGGSPSNTRYLFLGDYVDRGYFSIEVVPSSAATIKLHDQSIGTQQWEHSPLGELCPPGSHRSEHPGACNRCTEG
VGYTNASNNLFACLPCTACKSDEEERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIECVHKESGNGHNIW
VILVVTLVVPLLLVAVLIVCCCIGSGCGGDPKCMDRVCFWRLGLLRGPGAEDNAHNEILSNADSLSTFVSEQQMESQEPADLTGVTVQSP
GEAQCLLGPAEAEGSQRRRLLVPANGADPTETLMLFFDKFANIVPFDSWDQLMRQLDLTKNEIDVVRAGTAGPGDALYAMLMKWVNKTGR

--------------------------------------------------------------
>68158_68158_4_PPP3CC-TNFRSF10A_PPP3CC_chr8_22333137_ENST00000518852_TNFRSF10A_chr8_23069725_ENST00000221132_length(transcript)=3306nt_BP=963nt
GTTCCGGGCCCGGGTAGGGGCTGGCAGGAGAGAAGGGGCCGGCTGCGGGGAGGGCTGGCTGAGAAGAAGCGAAAATGGGCGGTTAGCAGC
AGGGACCCGGAGCCGGAGGAGCCGAGAGCAGCGCGTGCGCCGAGCTCTACTGCCTCGCGGGAAGGCGGAAGGGTGGGGAGGGCGGCGCTC
GGGGCGGGAGGCCCGGCCGGGTCCGCTAGGACAGCGGGGCCGCTGGGAAGTTGTGAGAGCGGCGCTCGGGGGCGCGCTTGCGTGCACGAG
GGCCCGGGCCGCGAGCAGCCGCGGCCGTCCCGGTCGCCACCCTTAGCAGCGGTCGCGGTCGGTGCCGAAGCGGTGTTCCCCGCCTTAGCC
GCTGGCGCCTCCCAAGAGAGCGGCCGGTGGGCCCTCGTCCTGTCAGTGGCGTCGGAGGCCGGCGCTGCGGTGGCCGCGCCCTTCTGGTGC
TCGGACACCGCTGAGGAGCCGGGGCCGGGCACGGCTGGCTGACGGCTCCGGGCAGCTAAGGCTGCCCGAGGAGAAGGCGGCGGCCGCGGC
GTAGGCGCACGTCCGGCGGGCTCCTGGAGCCTGGAGGAGGCCGAGGGGACCATGTCCGGGAGGCGCTTCCACCTCTCCACCACCGACCGC
GTCATCAAAGCTGTCCCCTTTCCTCCAACCCAACGGCTTACTTTCAAGGAAGTATTTGAGAATGGGAAACCTAAAGTTGATGTTTTAAAA
AACCATTTGGTAAAGGAAGGACGACTGGAAGAGGAAGTAGCCTTAAAGATAATCAATGATGGGGCTGCCATCCTGAGGCAAGAGAAGACT
ATGATAGAAGTAGATGCTCCAATCACAGTATGTGGTGATATTCATGGACAATTCTTTGACCTAATGAAGTTATTTGAAGTTGGAGGATCA
CCTAGTAACACACGCTACCTCTTTCTGGGTGACTATGTGGACAGAGGCTATTTCAGTATAGAGGTCGTACCTAGCTCAGCTGCAACCATC
AAACTTCATGATCAATCAATTGGCACACAGCAATGGGAACATAGCCCTTTGGGAGAGTTGTGTCCACCAGGATCTCATAGATCAGAACAT
CCTGGAGCCTGTAACCGGTGCACAGAGGGTGTGGGTTACACCAATGCTTCCAACAATTTGTTTGCTTGCCTCCCATGTACAGCTTGTAAA
TCAGATGAAGAAGAGAGAAGTCCCTGCACCACGACCAGGAACACAGCATGTCAGTGCAAACCAGGAACTTTCCGGAATGACAATTCTGCT
GAGATGTGCCGGAAGTGCAGCAGAGGGTGCCCCAGAGGGATGGTCAAGGTCAAGGATTGTACGCCCTGGAGTGACATCGAGTGTGTCCAC
AAAGAATCAGGCAATGGACATAATATATGGGTGATTTTGGTTGTGACTTTGGTTGTTCCGTTGCTGTTGGTGGCTGTGCTGATTGTCTGT
TGTTGCATCGGCTCAGGTTGTGGAGGGGACCCCAAGTGCATGGACAGGGTGTGTTTCTGGCGCTTGGGTCTCCTACGAGGGCCTGGGGCT
GAGGACAATGCTCACAACGAGATTCTGAGCAACGCAGACTCGCTGTCCACTTTCGTCTCTGAGCAGCAAATGGAAAGCCAGGAGCCGGCA
GATTTGACAGGTGTCACTGTACAGTCCCCAGGGGAGGCACAGTGTCTGCTGGGACCGGCAGAAGCTGAAGGGTCTCAGAGGAGGAGGCTG
CTGGTTCCAGCAAATGGTGCTGACCCCACTGAGACTCTGATGCTGTTCTTTGACAAGTTTGCAAACATCGTGCCCTTTGACTCCTGGGAC
CAGCTCATGAGGCAGCTGGACCTCACGAAAAATGAGATCGATGTGGTCAGAGCTGGTACAGCAGGCCCAGGGGATGCCTTGTATGCAATG
CTGATGAAATGGGTCAACAAAACTGGACGGAACGCCTCGATCCACACCCTGCTGGATGCCTTGGAGAGGATGGAAGAGAGACATGCAAGA
GAGAAGATTCAGGACCTCTTGGTGGACTCTGGAAAGTTCATCTACTTAGAAGATGGCACAGGCTCTGCCGTGTCCTTGGAGTGAAAGACT
CTTTTTACCAGAGGTTTCCTCTTAGGTGTTAGGAGTTAATACATATTAGGTTTTTTTTTTTTTTAACATGTATACAAAGTAAATTCTTAG
CCAGGTGTAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGTGGATCACTTGAGGTCAGAAGTTCAAGACCAGCCTG
ACCAACATCGTGAAATGCCGTCTTTACAAAAAAATACAAAAATTAACTGGATGTGATGGTGTGTGCATATATTCTCGGCTACTCGGGAGG
CTGAGGCAGGAGAATCACTTGAACCCACGAGGCAGTGAGCTGAGATTGCACCACTGCACTCCAGCCTGGGACACAGAGCAAGACTCTGTC
TCAAGATAAAATAAAATAAACTTGAAAGAATTATTGCCCGACTGAGGCTCACATGCCAAAGGAAAATCTGGTTCTCCCCTGAGCTGGCCT
CCGTGTGTTTCCTTATCATGGTGGTCAATTGGAGGTGTTAATTTGAATGGATTAAGGAACACCTAGAACACTGGTAAGGCATTATTTCTG
GGACATTATTTCTGGGCATGTCTTCGAGGGTGTTTCCAGAGGGGATTGGCATGCGATCGGGTGGACTGAGTGGAAAAGACCTACCCTTAA
TTTGGGGGGGCACCGTCCGACAGACTGGGGAGCAAGATAGAAGAAAACAAAAAAAAAAGGAAAAGCAAATCCATCTGATCTCCTGGAGCT
GGGACACTCTTCTGCCTGTGGACATCAGAGTCTAGGATTTCTAGCCCTTGGACTCCAGGGCATACACCAGTGGCCTCCCGAAGGATCTAA
GGATTTTGGCCTTGAACTAAGAATTACACCATCGGCTTCCCTGGGTCTTAGGTTTTTGGGCTGGATTAAGTCCTGCTTCCAGCATTTCAG
GGTCTCTGCTGTGCAGATGGCCTGTTGTGGAACTTCTCAACCTCCATTATCAGATGCATTAATTCCTCCAATAAGTCCCATTTCATATAT
AGTCATTTACCCCACAACATTTCAGTCAAGGGAACAGCATATAAGATGGTGGCCGTCCAGTAAGCTAAGGTTAATTTATTAATTATTTAA
TTTATTTACCTTGAGTTCAAGTCACAATTAAAGTACATATACCTTTGGAAATTTGGACTTTTGTATATAAAAGTACTTTTTTTTGGCGGG

>68158_68158_4_PPP3CC-TNFRSF10A_PPP3CC_chr8_22333137_ENST00000518852_TNFRSF10A_chr8_23069725_ENST00000221132_length(amino acids)=497AA_BP=307
MEEAEGTMSGRRFHLSTTDRVIKAVPFPPTQRLTFKEVFENGKPKVDVLKNHLVKEGRLEEEVALKIINDGAAILRQEKTMIEVDAPITV
CGDIHGQFFDLMKLFEVGGSPSNTRYLFLGDYVDRGYFSIEVVPSSAATIKLHDQSIGTQQWEHSPLGELCPPGSHRSEHPGACNRCTEG
VGYTNASNNLFACLPCTACKSDEEERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIECVHKESGNGHNIW
VILVVTLVVPLLLVAVLIVCCCIGSGCGGDPKCMDRVCFWRLGLLRGPGAEDNAHNEILSNADSLSTFVSEQQMESQEPADLTGVTVQSP
GEAQCLLGPAEAEGSQRRRLLVPANGADPTETLMLFFDKFANIVPFDSWDQLMRQLDLTKNEIDVVRAGTAGPGDALYAMLMKWVNKTGR

--------------------------------------------------------------

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Fusion Gene PPI Analysis for PPP3CC-TNFRSF10A


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for PPP3CC-TNFRSF10A


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for PPP3CC-TNFRSF10A


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource