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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:PRRC2B-PPAPDC3 (FusionGDB2 ID:69228) |
Fusion Gene Summary for PRRC2B-PPAPDC3 |
Fusion gene summary |
Fusion gene information | Fusion gene name: PRRC2B-PPAPDC3 | Fusion gene ID: 69228 | Hgene | Tgene | Gene symbol | PRRC2B | PPAPDC3 | Gene ID | 84726 | 84814 |
Gene name | proline rich coiled-coil 2B | phospholipid phosphatase 7 (inactive) | |
Synonyms | BAT2L|BAT2L1|KIAA0515|LQFBS-1 | C9orf67|NET39|PPAPDC3 | |
Cytomap | 9q34.13 | 9q34.13 | |
Type of gene | protein-coding | protein-coding | |
Description | protein PRRC2BHLA-B associated transcript 2-likeHLA-B-associated transcript 2-like 1proline-rich coiled-coil protein 2Bprotein BAT2-like 1 | inactive phospholipid phosphatase 7epididymis secretory sperm binding proteinnuclear envelope transmembrane protein NET39phosphatidic acid phosphatase type 2 domain containing 3phosphatidic acid phosphatase type 2 domain-containing protein 3probable | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000357304, ENST00000405995, ENST00000458550, ENST00000372249, ENST00000465931, | ENST00000372261, ENST00000372264, | |
Fusion gene scores | * DoF score | 25 X 25 X 14=8750 | 2 X 1 X 2=4 |
# samples | 36 | 3 | |
** MAII score | log2(36/8750*10)=-4.60321420527738 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/4*10)=2.90689059560852 | |
Context | PubMed: PRRC2B [Title/Abstract] AND PPAPDC3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | PRRC2B(134358832)-PPAPDC3(134183310), # samples:1 PRRC2B(134269650)-PPAPDC3(134183310), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across PRRC2B (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across PPAPDC3 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | OV | TCGA-29-1707-02A | PRRC2B | chr9 | 134269650 | + | PPAPDC3 | chr9 | 134183310 | + |
ChimerDB4 | OV | TCGA-30-1892-01A | PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183310 | + |
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Fusion Gene ORF analysis for PRRC2B-PPAPDC3 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000357304 | ENST00000372261 | PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183310 | + |
5CDS-intron | ENST00000405995 | ENST00000372261 | PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183310 | + |
5CDS-intron | ENST00000458550 | ENST00000372261 | PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183310 | + |
5UTR-3CDS | ENST00000372249 | ENST00000372264 | PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183310 | + |
5UTR-3CDS | ENST00000405995 | ENST00000372264 | PRRC2B | chr9 | 134269650 | + | PPAPDC3 | chr9 | 134183310 | + |
5UTR-intron | ENST00000372249 | ENST00000372261 | PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183310 | + |
5UTR-intron | ENST00000405995 | ENST00000372261 | PRRC2B | chr9 | 134269650 | + | PPAPDC3 | chr9 | 134183310 | + |
In-frame | ENST00000357304 | ENST00000372264 | PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183310 | + |
In-frame | ENST00000405995 | ENST00000372264 | PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183310 | + |
In-frame | ENST00000458550 | ENST00000372264 | PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183310 | + |
intron-3CDS | ENST00000357304 | ENST00000372264 | PRRC2B | chr9 | 134269650 | + | PPAPDC3 | chr9 | 134183310 | + |
intron-3CDS | ENST00000372249 | ENST00000372264 | PRRC2B | chr9 | 134269650 | + | PPAPDC3 | chr9 | 134183310 | + |
intron-3CDS | ENST00000458550 | ENST00000372264 | PRRC2B | chr9 | 134269650 | + | PPAPDC3 | chr9 | 134183310 | + |
intron-3CDS | ENST00000465931 | ENST00000372264 | PRRC2B | chr9 | 134269650 | + | PPAPDC3 | chr9 | 134183310 | + |
intron-3CDS | ENST00000465931 | ENST00000372264 | PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183310 | + |
intron-intron | ENST00000357304 | ENST00000372261 | PRRC2B | chr9 | 134269650 | + | PPAPDC3 | chr9 | 134183310 | + |
intron-intron | ENST00000372249 | ENST00000372261 | PRRC2B | chr9 | 134269650 | + | PPAPDC3 | chr9 | 134183310 | + |
intron-intron | ENST00000458550 | ENST00000372261 | PRRC2B | chr9 | 134269650 | + | PPAPDC3 | chr9 | 134183310 | + |
intron-intron | ENST00000465931 | ENST00000372261 | PRRC2B | chr9 | 134269650 | + | PPAPDC3 | chr9 | 134183310 | + |
intron-intron | ENST00000465931 | ENST00000372261 | PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183310 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000405995 | PRRC2B | chr9 | 134358832 | + | ENST00000372264 | PPAPDC3 | chr9 | 134183310 | + | 4944 | 3604 | 226 | 3624 | 1132 |
ENST00000357304 | PRRC2B | chr9 | 134358832 | + | ENST00000372264 | PPAPDC3 | chr9 | 134183310 | + | 6855 | 5515 | 55 | 5535 | 1826 |
ENST00000458550 | PRRC2B | chr9 | 134358832 | + | ENST00000372264 | PPAPDC3 | chr9 | 134183310 | + | 4718 | 3378 | 0 | 3398 | 1132 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000405995 | ENST00000372264 | PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183310 | + | 0.004643468 | 0.9953565 |
ENST00000357304 | ENST00000372264 | PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183310 | + | 0.002853537 | 0.9971464 |
ENST00000458550 | ENST00000372264 | PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183310 | + | 0.003358889 | 0.99664116 |
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Fusion Genomic Features for PRRC2B-PPAPDC3 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183309 | + | 4.37E-09 | 1 |
PRRC2B | chr9 | 134269650 | + | PPAPDC3 | chr9 | 134183309 | + | 3.15E-16 | 1 |
PRRC2B | chr9 | 134358832 | + | PPAPDC3 | chr9 | 134183309 | + | 4.37E-09 | 1 |
PRRC2B | chr9 | 134269650 | + | PPAPDC3 | chr9 | 134183309 | + | 3.15E-16 | 1 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for PRRC2B-PPAPDC3 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr9:134358832/chr9:134183310) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000357304 | + | 22 | 31 | 1563_1587 | 1820 | 2230.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000357304 | + | 22 | 31 | 495_553 | 1820 | 2230.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000405995 | + | 22 | 31 | 495_553 | 1126 | 1536.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000458550 | + | 21 | 30 | 495_553 | 1126 | 1536.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000357304 | + | 22 | 31 | 391_395 | 1820 | 2230.0 | Compositional bias | Note=Poly-Glu |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000357304 | + | 22 | 31 | 616_647 | 1820 | 2230.0 | Compositional bias | Note=Gln-rich |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000405995 | + | 22 | 31 | 391_395 | 1126 | 1536.0 | Compositional bias | Note=Poly-Glu |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000405995 | + | 22 | 31 | 616_647 | 1126 | 1536.0 | Compositional bias | Note=Gln-rich |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000458550 | + | 21 | 30 | 391_395 | 1126 | 1536.0 | Compositional bias | Note=Poly-Glu |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000458550 | + | 21 | 30 | 616_647 | 1126 | 1536.0 | Compositional bias | Note=Gln-rich |
Tgene | PPAPDC3 | chr9:134358832 | chr9:134183310 | ENST00000372264 | 0 | 2 | 163_202 | 150 | 272.0 | Topological domain | Cytoplasmic | |
Tgene | PPAPDC3 | chr9:134358832 | chr9:134183310 | ENST00000372264 | 0 | 2 | 224_239 | 150 | 272.0 | Topological domain | Extracellular | |
Tgene | PPAPDC3 | chr9:134358832 | chr9:134183310 | ENST00000372264 | 0 | 2 | 261_271 | 150 | 272.0 | Topological domain | Cytoplasmic | |
Tgene | PPAPDC3 | chr9:134358832 | chr9:134183310 | ENST00000372264 | 0 | 2 | 203_223 | 150 | 272.0 | Transmembrane | Helical | |
Tgene | PPAPDC3 | chr9:134358832 | chr9:134183310 | ENST00000372264 | 0 | 2 | 240_260 | 150 | 272.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000372249 | + | 16 | 24 | 1563_1587 | 0 | 269.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000372249 | + | 16 | 24 | 495_553 | 0 | 269.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000405995 | + | 22 | 31 | 1563_1587 | 1126 | 1536.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000458550 | + | 21 | 30 | 1563_1587 | 1126 | 1536.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000357304 | + | 22 | 31 | 1953_1956 | 1820 | 2230.0 | Compositional bias | Note=Poly-Ala |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000372249 | + | 16 | 24 | 1953_1956 | 0 | 269.0 | Compositional bias | Note=Poly-Ala |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000372249 | + | 16 | 24 | 391_395 | 0 | 269.0 | Compositional bias | Note=Poly-Glu |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000372249 | + | 16 | 24 | 616_647 | 0 | 269.0 | Compositional bias | Note=Gln-rich |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000405995 | + | 22 | 31 | 1953_1956 | 1126 | 1536.0 | Compositional bias | Note=Poly-Ala |
Hgene | PRRC2B | chr9:134358832 | chr9:134183310 | ENST00000458550 | + | 21 | 30 | 1953_1956 | 1126 | 1536.0 | Compositional bias | Note=Poly-Ala |
Tgene | PPAPDC3 | chr9:134358832 | chr9:134183310 | ENST00000372264 | 0 | 2 | 134_141 | 150 | 272.0 | Topological domain | Extracellular | |
Tgene | PPAPDC3 | chr9:134358832 | chr9:134183310 | ENST00000372264 | 0 | 2 | 1_112 | 150 | 272.0 | Topological domain | Cytoplasmic | |
Tgene | PPAPDC3 | chr9:134358832 | chr9:134183310 | ENST00000372264 | 0 | 2 | 113_133 | 150 | 272.0 | Transmembrane | Helical | |
Tgene | PPAPDC3 | chr9:134358832 | chr9:134183310 | ENST00000372264 | 0 | 2 | 142_162 | 150 | 272.0 | Transmembrane | Helical |
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Fusion Gene Sequence for PRRC2B-PPAPDC3 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>69228_69228_1_PRRC2B-PPAPDC3_PRRC2B_chr9_134358832_ENST00000357304_PPAPDC3_chr9_134183310_ENST00000372264_length(transcript)=6855nt_BP=5515nt GCAGATCGGGAGCGGTGCCGAGAAAAATTTCCTTACTAGATGACATTTCATCGCAATGTCCGATCGTTTGGGGCAAATTACCAAGGGCAA GGATGGGAAAAGCAAGTACTCGACTCTCAGCCTGTTTGATAAGTATAAAGGAAAATCAGTAGACGCGATTAGATCCTCAGTTATTCCTAG ACATGGCTTACAGAGTCTTGGGAAAGTTGCTGCAGCCCGGCGCATGCCACCGCCTGCAAACCTGCCAAGCTTGAAGTCTGAAAACAAAGG AAACGACCCCAACATCGTGATAGTACCCAAGGACGGGACGGGATGGGCAAACAAGCAGGATCAGCAAGACCCAAAGAGTTCCAGTGCGAC GGCCTCTCAGCCGCCGGAGTCGCTGCCGCAGCCGGGTTTGCAGAAATCTGTCTCCAATTTGCAGAAACCGACACAGTCAATCAGTCAGGA GAATACAAATTCAGTGCCAGGTGGACCAAAGTCATGGGCACAGCTGAATGGAAAGCCAGTAGGACACGAAGGTGGTTTAAGGGGCTCAAG CCGACTGTTATCCTTCTCTCCCGAGGAATTTCCGACGCTGAAAGCAGCTGGAGGGCAGGACAAGGCTGGCAAAGAAAAGGGCGTCTTAGA TCTGTCGTATGGGCCAGGACCAAGCCTCCGCCCTCAGAATGTGACAAGCTGGAGGGAGGGCGGTGGGCGACACATAATTTCTGCCACGTC TCTGAGCACCTCCCCAACTGAGCTGGGCAGCAGGAACTCGAGTACGGGAGATGGAGCCCCCTCCTCGGCATGTACCAGCGATTCTAAGGA CCCCTCTCTCCGCCCGGCTCAGCCTGTCCGAAAAGGGGCTTCACAGTTCATGGGAAATGTATACCACCCACCTACATACCATGACATGCT TCCTGCTTTTATGTGTTCGCCGAAGTCATCAGAAAACCAGGGTACAGTGGAACGAGGCTCTTTTCCCCTTCCTCAGCTCCGCCTTGAACC TCGAGTTCCTTTTAGACAGTTCCAGATGAATGACCAAGACGGAAAAGAAAACAGGCTGGGATTGTCTCGCCCACTCCGCCCACTAAGGCA GCTGGTGGAGCGGGCACCACGGCCCACCATTATCAATGCGGAAAACCTGAAGGGCCTTGACGATCTGGACGCCGATGCCGATGATGGCTG GGCAGGCCTCCATGAAGAAGTGGACTATTCTGAGAAACTGAAGTTCAGTGATGATGAAGAGGAGGAAGAAGTTGTGAAGGACGGCAGGCC AAAGTGGAACAGTTGGGACCCTAGGAGGCAGCGGCAGTTGTCAATGAGCTCTGCAGACAGTGCGGACGCTAAGCGGACTCGAGAGGAAGG GAAGGACTGGGCTGAAGCAGTGGGTGCGTCCCGTGTGGTCCGAAAGGCGCCAGACCCTCAGCCACCGCCCAGGAAGCTTCATGGCTGGGC ACCAGGCCCTGACTACCAGAAGTCATCAATGGGCAGCATGTTCCGGCAACAGTCCATCGAGGACAAGGAGGACAAGCCCCCACCAAGGCA GAAGTTCATTCAGTCAGAGATGTCCGAGGCGGTGGAGCGAGCCCGAAAGCGCCGGGAAGAAGAGGAGCGCCGAGCCCGGGAGGAGAGGCT GGCCGCCTGTGCTGCCAAACTCAAGCAGCTGGACCAGAAGTGTAAGCAGGCACGAAAGGCAGGTGAGGCCCGGAAGCAGGCAGAGAAGGA AGTGCCCTGGTCTCCAAGTGCTGAGAAGGCATCTCCCCAGGAAAACGGCCCTGCTGTCCACAAAGGCTCCCCAGAATTCCCTGCCCAAGA GACCCCCACCACATTCCCAGAAGAGGCACCCACAGTGTCCCCAGCAGTGGCACAGAGCAACAGCAGTGAGGAAGAGGCCAGAGAGGCTGG GTCCCCTGCACAGGAGTTCAAGTATCAGAAGTCCCTTCCTCCCCGATTCCAGCGCCAGCAGCAGCAACAACAGCAGGAGCAGCTGTACAA GATGCAGCACTGGCAGCCGGTGTACCCCCCGCCGTCCCACCCCCAGCGCACCTTTTACCCACACCACCCCCAGATGTTGGGCTTCGATCC CAGGTGGATGATGATGCCTTCCTACATGGACCCACGTATCACGCCCACTCGGACCCCGGTGGACTTCTACCCCTCCGCCCTGCATCCCTC AGGACTGATGAAGCCCATGATGCCCCAGGAGTCCCTCAATGGGACAGGCTGTCGCTCTGAGGATCAGAACTGTGTGCCCCCACTCCAAGA AAGAAAAGTGACCCCCATCGACTCACCCCCTGTGTGGAGCCCAGAGGGCTACATGGCACTGCAGAGCAAGGGCTACCCGCTCCCGCACCC GAAGTCGAGTGACACCTTGGCTATGGACATGCGTGTCAGGAATGAAAGCTCTTTCTCTGCCTCACTCGGAAGGGCAGGGGGCGTAAGTGC TCAGCGCGATCTCTTTGAGGAGAGAGGGGAGGAGTACTTGAGTGCTTTTGACAAGAAGGCCCAAGCAGACTTTGACAGCTGTATCTCTTC TCAAAGAATAGGCCAGGAGCTTTTGTTTCCACCCCAAGAAAATGTTCAGGATGCAGGTGCTCCTGGGGGTCACACCCAAAACCTCAGGTG TTCCCCATTGGAGCCTGACTTTGTCCCAGATGAGAAAAAGCCAGAGTGTGGCAGTTGGGATGTTAGCCACCAGCCAGAGACCGCTGACAC AGCCCATGGTGTTGAGCGGGAGACACCCCGGGAGGGGACGGCCTTTAACATCTCCTCCTGGGACAAGAACGGGAGCCCCAACAAACAGCC ATCCTCGGAGCCTGAATGGACTCCCGAGCCCCGGAGCTCCAGCAGCCAGCACCCGGAGCAGACGGGCAGGACCCGGAGGTCGGGACCCAT CAAGAAACCAGTCCTGAAAGCCCTCAAGGTGGAAGACAAGGAGAAGGAGCTTGAGAAGATTAAGCAGGAGCTAGGGGAGGAGAGTACCCG GCTGGCCAAGGAGAAGGAGCAGAGCCCCACGGCAGAAAAGGATGAGGACGAAGAGAACGATGCCTCTCTGGCCAACTCCTCCACCACCAC TTTGGAGGACAAAGGCCCTGGCCATGCCACTTTTGGCCGCGAGGCCACCAAATTTGAAGAGGAGGAGAAACCTGACAAGGCCTGGGAAGC CAGACCCCCACGAGAGTCCAGCGATGTTCCCCCCATGAAGAGAAATAACTGGATCTTTATTGATGAGGAGCAAGCCTTTGGGGTCAGAGG ACAGGCCCGGGGCCGGGGCCGTGGTTTCAGAGAGTTCACTTTTCGTGGTCGGCCTGCTGGCGGAAATGGGAGCGGCCTCTGTGGTGGGGG GGTCCTGGGGGCCCGCAGCATCTACTGCAGCAGTCAGCGCAGCGGCCGTGGCCGGGGCCTGCGAGAGTTTGCGCGGCCAGAGGACTGCCC CAGAGCCAAGCCCCGACGGAGAGTTGCCAGTGAGACCCATAGCGAGGGCTCAGAGTATGAAGAACTTCCCAAGCGCCGCCGGCAGAGGGG CTCCGAGAACGGGAATGAAGGCTCGCTCCTGGAGAGGGAGGAGAGCACCTTGAAGAAGGGCGACTGCAGAGATTCTTGGCGGTCCAACAA GGGGTGCTCTGAGGACCACAGCGGTCTAGATGCCAAGAGCCGAGGCCCTCGGGCCTTTGGGCGAGCCCTCCCTCCCCGGCTGAGCAATTG CGGGTATGGACGGAGAACCTTCGTCTCCAAAGAGTCACCCCACTGGCAGAGCAAAAGTCCAGGCAGCTCTTGGCAGGAATATGGCCCTTC CGACACATGCGGATCCCGGCGACCTACAGACAGAGACTATGTCCCAGATTCCTACAGACACCCTGACGCATTTGGTGGCCGGGGCTTTGA GGACAGCCGCGCGGAGGACAAGAGATCCTTCTTCCAAGATGAACACGTGGCAGATTCTGAAAATGCAGAGAACCGGCCCTTCAGGAGAAG GCGCCCCCCACGCCAAGATAAGCCCCCTCGATTCCGGCGCCTCCGGCAAGAGCGGGAGTCCCTGGGCCTGTGGGGACCCGAGGAGGAGCC CCACCTGCTGGCAGGTCAGTGGCCAGGCAGGCCCAAACTGTGTTCTGGGGACAAGAGTGGCACTGTGGGCCGCAGGTCCCCTGAGCTCTC CTACCAGAACTCCTCCGATCACGCCAATGAGGAGTGGGAGACGGCCTCCGAAAGCAGCGACTTCAGCGAGCGGCGGGAGCGGCGGGAAGG CCCTGGGTCCGAGCCCGACTCCCAGGTGGATGGTGGCCTGTCGGGGGCTAGTTTGGGTGAGAAGAAGGAGCTGGCCAAGAGGAGCTTCTC CAGTCAGAGACCCGTGGTTGACAGACAGAGCCGAAAGCTGGAGCCGGGAGGGTTTGGGGAGAAGCCCGTTAGGCCAGGTGGTGGTGACAC CTCCCCTCGCTATGAGAGCCAACAGAATGGGACGCCTTTGAAAGTGAAAAGATCCCCAGACGAGGCCTTGCCTGGAGGTCTTAGTGGCTG CAGCAGTGGGAGTGGCCACTCCCCCTATGCCCTGGAGCGGGCAGCCCATGCCAGTGCTGACCTTCCCGAAGCCTCCAGTAAAAAGGCAGA GAAGGAGGCCAAGTTGGCTGCTCCGAGGGCAGGTGAACAGGGAGAGGCCATGAAACAGTTTGACCTGAACTATGGAAGTGCCATCATTGA AAATTGCGGGTCCAGCCCCGGGGAGGAGAGTGAGGTGGGTTCTATGGTGGGCGAAGGCTTCATCGAAGTCCTGACCAAGAAGCAGCGCCG CCTGCTGGAGGAAGAGAGAAGAAAGAAGGAGCAGGCCGTGCAGGTGCCTGTCAAAGGTCGAGGCCTTTCCTCCCGTATTCCTCCTCGATT TGCAAAAAAGCAGAACAACTTATGTCTGGAGCAAGGTGACGTGACCGTGCCTGGCAGCAGCCTGGGCACTGAGATCTGGGAGAGCAGCAG CCAGGCTCTCCCTGTGCAGGCCCCAGCCAACGACTCCTGGAGGAAAGCTGTCACTGCCTTCAGCAGCACCGAGACTGGCTCTGCGGAGCA GGGTTTTAAGAGCAGCCAGGGAGATAGTGGCGTTGACTTGAGTGCCGAGTCTCGGGAGTCGTCTGCGACCTCCTCGCAGCGCAGCTCCCC ATATGGGACTCTGAAGCCAGAGGAGATGAGCGGGCCCGGCCTGGCGGAACCCAAGGCCGACAGCCACAAGGAGCAGGCTCCAAAGCCATC TGAGCAGAAGGATTCAGAACAAGGCTCTGGACAGAGCAAGGAGCACAGACCAGGACCCATCGGCAACGAGCGTTCTCTGAAAAACAGAAA GGGCTCGGAGGGGGCCGAGCGGCTGCAAGGGGCTGTCGTCCCGCCTGTTAACGGGGTGGAGATTCACGTGGACTCCGTGCTGCCTGTGCC ACCCATTGAATTTGGAGTCAGTCCAAAAGACTCCGATTTCAGCTTGCCACCTGGTTCTGCCTCTGGTCCTACTGGGAGTCCAGTTGTTAA ACTTCAGGATGCCTTGGCCAGTAATCCCTGCTCCTGGACATCATGACGGTGGCCGGCGTGCAGAAGCTCATCAAGCGGCGCGGCCCGTAC GAGACGAGCCCCAGCCTCCTGGACTACCTCACCATGGACATCTACGCCTTCCCGGCCGGGCACGCCAGCCGCGCCGCCATGGTGTCCAAG TTCTTCCTCAGCCACCTGGTGCTGGCGGTGCCCCTGCGTGTGCTGCTGGTGCTCTGGGCCCTCTGCGTGGGCCTGTCCCGCGTGATGATC GGCCGCCACCACGTCACGGACGTCCTCTCCGGCTTTGTCATCGGCTACCTCCAGTTCCGTCTGGTGGAGCTGGTCTGGATGCCCTCCAGC ACCTGCCAGATGCTCATCTCTGCCTGGTGAAGCGCCCGCCGGCCCACACAAGCCTCTGGGGGCAGGGCTGGCCCTAGAGAAGGGGCAGGG GGTGGCGAGGTGGCGGGCGTGGGTGGAACAGAGCGGCCAGGAGTCAGAGCGGCCACCCCCACCTCATCTTCCCCTCCTGGCTGGAGGCTG GCGAACCCAGGCCACCCCTCCCGGAGACAAGCGTGTTTGGCAGTGCCAGGCCTCTTGCCCCTTTGCTTGGACTCCAAGTCTCCTCTCTAG GCAGCCAGGACCCACCCATGGGGACAGCCCTATTTAGCTTCTGCTCTGGGAACAGCAAAAATCAGGATGGTGGGAGGGGCCGAGTCTTGT CTTGTCCTTTCATCATCATGACTGTTGAGTTCTTGGCTGTGCCCATCACGCCACAGCACGACGCCTGCCAAAATGCCCCCAACCTACTGC CTGATGCAGGTGCCATTGCCATTAGCGGTCATCGACAGCTTAGGGCAGCACTTTCCAACGGGTGCCCATGGGACACCAGCCTGCGAGATG CTTTTGGGGGAAAGGGGTTTTGTGGTTCAATAACTTTCGGAAGTGCTGCACACTCTGTCCCCAAGTTGGACATTCACAAAGGCCGTTATT GCCGTAAAGGCTCTGACAAGCCCTATAGAAAAGCTTCTTGCTAAACCTTCTTTAACCCATGTTTTCTAAACTTATTTGACCACAGAACCC TTTTCTTGGGGAACAGCTATTAACCCCCAAGGAATTATTGGTTCCTCAAGTGCGTTTTGGGAGCTGCTGCCAGAGAGCTAAAGGGCCTGG GGTGTGAGCTGACTCTCCTCTGGGGAGGCCGGGTGCACACGCCACAGCCCGAGGAAAGTGCTGGCCACCGCCCGTGGGCATCGATGAGGC TTTGGCCCCCAGGGGCCGGACTCCGTGTGACCTAATAGGTCGTTTCCAAGTCACCCGTTTTGGATGTGCATTTCATGTGACAATACAGAT >69228_69228_1_PRRC2B-PPAPDC3_PRRC2B_chr9_134358832_ENST00000357304_PPAPDC3_chr9_134183310_ENST00000372264_length(amino acids)=1826AA_BP= MSDRLGQITKGKDGKSKYSTLSLFDKYKGKSVDAIRSSVIPRHGLQSLGKVAAARRMPPPANLPSLKSENKGNDPNIVIVPKDGTGWANK QDQQDPKSSSATASQPPESLPQPGLQKSVSNLQKPTQSISQENTNSVPGGPKSWAQLNGKPVGHEGGLRGSSRLLSFSPEEFPTLKAAGG QDKAGKEKGVLDLSYGPGPSLRPQNVTSWREGGGRHIISATSLSTSPTELGSRNSSTGDGAPSSACTSDSKDPSLRPAQPVRKGASQFMG NVYHPPTYHDMLPAFMCSPKSSENQGTVERGSFPLPQLRLEPRVPFRQFQMNDQDGKENRLGLSRPLRPLRQLVERAPRPTIINAENLKG LDDLDADADDGWAGLHEEVDYSEKLKFSDDEEEEEVVKDGRPKWNSWDPRRQRQLSMSSADSADAKRTREEGKDWAEAVGASRVVRKAPD PQPPPRKLHGWAPGPDYQKSSMGSMFRQQSIEDKEDKPPPRQKFIQSEMSEAVERARKRREEEERRAREERLAACAAKLKQLDQKCKQAR KAGEARKQAEKEVPWSPSAEKASPQENGPAVHKGSPEFPAQETPTTFPEEAPTVSPAVAQSNSSEEEAREAGSPAQEFKYQKSLPPRFQR QQQQQQQEQLYKMQHWQPVYPPPSHPQRTFYPHHPQMLGFDPRWMMMPSYMDPRITPTRTPVDFYPSALHPSGLMKPMMPQESLNGTGCR SEDQNCVPPLQERKVTPIDSPPVWSPEGYMALQSKGYPLPHPKSSDTLAMDMRVRNESSFSASLGRAGGVSAQRDLFEERGEEYLSAFDK KAQADFDSCISSQRIGQELLFPPQENVQDAGAPGGHTQNLRCSPLEPDFVPDEKKPECGSWDVSHQPETADTAHGVERETPREGTAFNIS SWDKNGSPNKQPSSEPEWTPEPRSSSSQHPEQTGRTRRSGPIKKPVLKALKVEDKEKELEKIKQELGEESTRLAKEKEQSPTAEKDEDEE NDASLANSSTTTLEDKGPGHATFGREATKFEEEEKPDKAWEARPPRESSDVPPMKRNNWIFIDEEQAFGVRGQARGRGRGFREFTFRGRP AGGNGSGLCGGGVLGARSIYCSSQRSGRGRGLREFARPEDCPRAKPRRRVASETHSEGSEYEELPKRRRQRGSENGNEGSLLEREESTLK KGDCRDSWRSNKGCSEDHSGLDAKSRGPRAFGRALPPRLSNCGYGRRTFVSKESPHWQSKSPGSSWQEYGPSDTCGSRRPTDRDYVPDSY RHPDAFGGRGFEDSRAEDKRSFFQDEHVADSENAENRPFRRRRPPRQDKPPRFRRLRQERESLGLWGPEEEPHLLAGQWPGRPKLCSGDK SGTVGRRSPELSYQNSSDHANEEWETASESSDFSERRERREGPGSEPDSQVDGGLSGASLGEKKELAKRSFSSQRPVVDRQSRKLEPGGF GEKPVRPGGGDTSPRYESQQNGTPLKVKRSPDEALPGGLSGCSSGSGHSPYALERAAHASADLPEASSKKAEKEAKLAAPRAGEQGEAMK QFDLNYGSAIIENCGSSPGEESEVGSMVGEGFIEVLTKKQRRLLEEERRKKEQAVQVPVKGRGLSSRIPPRFAKKQNNLCLEQGDVTVPG SSLGTEIWESSSQALPVQAPANDSWRKAVTAFSSTETGSAEQGFKSSQGDSGVDLSAESRESSATSSQRSSPYGTLKPEEMSGPGLAEPK ADSHKEQAPKPSEQKDSEQGSGQSKEHRPGPIGNERSLKNRKGSEGAERLQGAVVPPVNGVEIHVDSVLPVPPIEFGVSPKDSDFSLPPG -------------------------------------------------------------- >69228_69228_2_PRRC2B-PPAPDC3_PRRC2B_chr9_134358832_ENST00000405995_PPAPDC3_chr9_134183310_ENST00000372264_length(transcript)=4944nt_BP=3604nt GCGCCGAGGCTCCACCGCGCAGCGACGAGCGAGCCCGGGAGGAGGGAGGGAGCGAGCGAGCGAGCAGCCCGCGCCGCCGCCTCGCAATCC GCCGCCATCCCGCCGCCCCCGTGCCCGACCGCCGCCCGACTGCCATCGCCCGGCCCGGCCGCGCCCGCGGAACCAGACCAGGCAGATCGG GAGCGGTGCCGAGAAAAATTTCCTTACTAGATGACATTTCATCGCAATGTCCGATCGTTTGGGGCAAATTACCAAGGGCAAGGATGGGAA AAGCAAGTACTCGACTCTCAGCCTGTTTGATAAGTATAAAGGAAAATCAGTAGACGCGATTAGATCCTCAGTTATTCCTAGACATGGCTT ACAGAGTCTTGGGAAAGTTGCTGCAGCCCGGCGCATGCCACCGCCTGCAAACCTGCCAAGCTTGAAGTCTGAAAACAAAGGAAACGACCC CAACATCGTGATAGTACCCAAGGACGGGACGGGATGGGCAAACAAGCAGGATCAGCAAGACCCAAAGAGTTCCAGTGCGACGGCCTCTCA GCCGCCGGAGTCGCTGCCGCAGCCGGGTTTGCAGAAATCTGTCTCCAATTTGCAGAAACCGACACAGTCAATCAGTCAGGAGAATACAAA TTCAGTGCCAGGTGGACCAAAGTCATGGGCACAGCTGAATGGAAAGCCAGTAGGACACGAAGGTGGTTTAAGGGGCTCAAGCCGACTGTT ATCCTTCTCTCCCGAGGAATTTCCGACGCTGAAAGCAGCTGGAGGGCAGGACAAGGCTGGCAAAGAAAAGGGCGTCTTAGATCTGTCGTA TGGGCCAGGACCAAGCCTCCGCCCTCAGAATGTGACAAGCTGGAGGGAGGGCGGTGGGCGACACATAATTTCTGCCACGTCTCTGAGCAC CTCCCCAACTGAGCTGGGCAGCAGGAACTCGAGTACGGGAGATGGAGCCCCCTCCTCGGCATGTACCAGCGATTCTAAGGACCCCTCTCT CCGCCCGGCTCAGCCTGTCCGAAAAGGGGCTTCACAGTTCATGGGAAATGTATACCACCCACCTACATACCATGACATGCTTCCTGCTTT TATGTGTTCGCCGAAGTCATCAGAAAACCAGGGTACAGTGGAACGAGGCTCTTTTCCCCTTCCTCAGCTCCGCCTTGAACCTCGAGTTCC TTTTAGACAGTTCCAGATGAATGACCAAGACGGAAAAGAAAACAGGCTGGGATTGTCTCGCCCACTCCGCCCACTAAGGCAGCTGGTGGA GCGGGCACCACGGCCCACCATTATCAATGCGGAAAACCTGAAGGGCCTTGACGATCTGGACGCCGATGCCGATGATGGCTGGGCAGGCCT CCATGAAGAAGTGGACTATTCTGAGAAACTGAAGTTCAGTGATGATGAAGAGGAGGAAGAAGTTGTGAAGGACGGCAGGCCAAAGTGGAA CAGTTGGGACCCTAGGAGGCAGCGGCAGTTGTCAATGAGCTCTGCAGACAGTGCGGACGCTAAGCGGACTCGAGAGGAAGGGAAGGACTG GGCTGAAGCAGTGGGTGCGTCCCGTGTGGTCCGAAAGGCGCCAGACCCTCAGCCACCGCCCAGGAAGCTTCATGGCTGGGCACCAGGCCC TGACTACCAGAAGTCATCAATGGGCAGCATGTTCCGGCAACAGTCCATCGAGGACAAGGAGGACAAGCCCCCACCAAGGCAGAAGTTCAT TCAGTCAGAGATGTCCGAGGCGGTGGAGCGAGCCCGAAAGCGCCGGGAAGAAGAGGAGCGCCGAGCCCGGGAGGAGAGGCTGGCCGCCTG TGCTGCCAAACTCAAGCAGCTGGACCAGAAGTGTAAGCAGGCACGAAAGGCAGGTGAGGCCCGGAAGCAGGCAGAGAAGGAAGTGCCCTG GTCTCCAAGTGCTGAGAAGGCATCTCCCCAGGAAAACGGCCCTGCTGTCCACAAAGGCTCCCCAGAATTCCCTGCCCAAGAGACCCCCAC CACATTCCCAGAAGAGGCACCCACAGTGTCCCCAGCAGTGGCACAGAGCAACAGCAGTGAGGAAGAGGCCAGAGAGGCTGGGTCCCCTGC ACAGGAGTTCAAGTATCAGAAGTCCCTTCCTCCCCGATTCCAGCGCCAGCAGCAGCAACAACAGCAGGAGCAGCTGTACAAGATGCAGCA CTGGCAGCCGGTGTACCCCCCGCCGTCCCACCCCCAGCGCACCTTTTACCCACACCACCCCCAGATGTTGGGCTTCGATCCCAGGTGGAT GATGATGCCTTCCTACATGGACCCACGTATCACGCCCACTCGGACCCCGGTGGACTTCTACCCCTCCGCCCTGCATCCCTCAGGACTGAT GAAGCCCATGATGCCCCAGGAGTCCCTCAATGGGACAGGCTGTCGCTCTGAGGATCAGAACTGTGTGCCCCCACTCCAAGAAAGAAAAGT GACCCCCATCGACTCACCCCCTGTGTGGAGCCCAGAGGGCTACATGGCACTGCAGAGCAAGGGCTACCCGCTCCCGCACCCGAAGTCGAG TGACACCTTGGCTATGGACATGCGTGTCAGATCCCCAGACGAGGCCTTGCCTGGAGGTCTTAGTGGCTGCAGCAGTGGGAGTGGCCACTC CCCCTATGCCCTGGAGCGGGCAGCCCATGCCAGTGCTGACCTTCCCGAAGCCTCCAGTAAAAAGGCAGAGAAGGAGGCCAAGTTGGCTGC TCCGAGGGCAGGTGAACAGGGAGAGGCCATGAAACAGTTTGACCTGAACTATGGAAGTGCCATCATTGAAAATTGCGGGTCCAGCCCCGG GGAGGAGAGTGAGGTGGGTTCTATGGTGGGCGAAGGCTTCATCGAAGTCCTGACCAAGAAGCAGCGCCGCCTGCTGGAGGAAGAGAGAAG AAAGAAGGAGCAGGCCGTGCAGGTGCCTGTCAAAGGTCGAGGCCTTTCCTCCCGTATTCCTCCTCGATTTGCAAAAAAGCAGAACAACTT ATGTCTGGAGCAAGGTGACGTGACCGTGCCTGGCAGCAGCCTGGGCACTGAGATCTGGGAGAGCAGCAGCCAGGCTCTCCCTGTGCAGGC CCCAGCCAACGACTCCTGGAGGAAAGCTGTCACTGCCTTCAGCAGCACCGAGACTGGCTCTGCGGAGCAGGGTTTTAAGAGCAGCCAGGG AGATAGTGGCGTTGACTTGAGTGCCGAGTCTCGGGAGTCGTCTGCGACCTCCTCGCAGCGCAGCTCCCCATATGGGACTCTGAAGCCAGA GGAGATGAGCGGGCCCGGCCTGGCGGAACCCAAGGCCGACAGCCACAAGGAGCAGGCTCCAAAGCCATCTGAGCAGAAGGATTCAGAACA AGGCTCTGGACAGAGCAAGGAGCACAGACCAGGACCCATCGGCAACGAGCGTTCTCTGAAAAACAGAAAGGGCTCGGAGGGGGCCGAGCG GCTGCAAGGGGCTGTCGTCCCGCCTGTTAACGGGGTGGAGATTCACGTGGACTCCGTGCTGCCTGTGCCACCCATTGAATTTGGAGTCAG TCCAAAAGACTCCGATTTCAGCTTGCCACCTGGTTCTGCCTCTGGTCCTACTGGGAGTCCAGTTGTTAAACTTCAGGATGCCTTGGCCAG TAATCCCTGCTCCTGGACATCATGACGGTGGCCGGCGTGCAGAAGCTCATCAAGCGGCGCGGCCCGTACGAGACGAGCCCCAGCCTCCTG GACTACCTCACCATGGACATCTACGCCTTCCCGGCCGGGCACGCCAGCCGCGCCGCCATGGTGTCCAAGTTCTTCCTCAGCCACCTGGTG CTGGCGGTGCCCCTGCGTGTGCTGCTGGTGCTCTGGGCCCTCTGCGTGGGCCTGTCCCGCGTGATGATCGGCCGCCACCACGTCACGGAC GTCCTCTCCGGCTTTGTCATCGGCTACCTCCAGTTCCGTCTGGTGGAGCTGGTCTGGATGCCCTCCAGCACCTGCCAGATGCTCATCTCT GCCTGGTGAAGCGCCCGCCGGCCCACACAAGCCTCTGGGGGCAGGGCTGGCCCTAGAGAAGGGGCAGGGGGTGGCGAGGTGGCGGGCGTG GGTGGAACAGAGCGGCCAGGAGTCAGAGCGGCCACCCCCACCTCATCTTCCCCTCCTGGCTGGAGGCTGGCGAACCCAGGCCACCCCTCC CGGAGACAAGCGTGTTTGGCAGTGCCAGGCCTCTTGCCCCTTTGCTTGGACTCCAAGTCTCCTCTCTAGGCAGCCAGGACCCACCCATGG GGACAGCCCTATTTAGCTTCTGCTCTGGGAACAGCAAAAATCAGGATGGTGGGAGGGGCCGAGTCTTGTCTTGTCCTTTCATCATCATGA CTGTTGAGTTCTTGGCTGTGCCCATCACGCCACAGCACGACGCCTGCCAAAATGCCCCCAACCTACTGCCTGATGCAGGTGCCATTGCCA TTAGCGGTCATCGACAGCTTAGGGCAGCACTTTCCAACGGGTGCCCATGGGACACCAGCCTGCGAGATGCTTTTGGGGGAAAGGGGTTTT GTGGTTCAATAACTTTCGGAAGTGCTGCACACTCTGTCCCCAAGTTGGACATTCACAAAGGCCGTTATTGCCGTAAAGGCTCTGACAAGC CCTATAGAAAAGCTTCTTGCTAAACCTTCTTTAACCCATGTTTTCTAAACTTATTTGACCACAGAACCCTTTTCTTGGGGAACAGCTATT AACCCCCAAGGAATTATTGGTTCCTCAAGTGCGTTTTGGGAGCTGCTGCCAGAGAGCTAAAGGGCCTGGGGTGTGAGCTGACTCTCCTCT GGGGAGGCCGGGTGCACACGCCACAGCCCGAGGAAAGTGCTGGCCACCGCCCGTGGGCATCGATGAGGCTTTGGCCCCCAGGGGCCGGAC >69228_69228_2_PRRC2B-PPAPDC3_PRRC2B_chr9_134358832_ENST00000405995_PPAPDC3_chr9_134183310_ENST00000372264_length(amino acids)=1132AA_BP= MSDRLGQITKGKDGKSKYSTLSLFDKYKGKSVDAIRSSVIPRHGLQSLGKVAAARRMPPPANLPSLKSENKGNDPNIVIVPKDGTGWANK QDQQDPKSSSATASQPPESLPQPGLQKSVSNLQKPTQSISQENTNSVPGGPKSWAQLNGKPVGHEGGLRGSSRLLSFSPEEFPTLKAAGG QDKAGKEKGVLDLSYGPGPSLRPQNVTSWREGGGRHIISATSLSTSPTELGSRNSSTGDGAPSSACTSDSKDPSLRPAQPVRKGASQFMG NVYHPPTYHDMLPAFMCSPKSSENQGTVERGSFPLPQLRLEPRVPFRQFQMNDQDGKENRLGLSRPLRPLRQLVERAPRPTIINAENLKG LDDLDADADDGWAGLHEEVDYSEKLKFSDDEEEEEVVKDGRPKWNSWDPRRQRQLSMSSADSADAKRTREEGKDWAEAVGASRVVRKAPD PQPPPRKLHGWAPGPDYQKSSMGSMFRQQSIEDKEDKPPPRQKFIQSEMSEAVERARKRREEEERRAREERLAACAAKLKQLDQKCKQAR KAGEARKQAEKEVPWSPSAEKASPQENGPAVHKGSPEFPAQETPTTFPEEAPTVSPAVAQSNSSEEEAREAGSPAQEFKYQKSLPPRFQR QQQQQQQEQLYKMQHWQPVYPPPSHPQRTFYPHHPQMLGFDPRWMMMPSYMDPRITPTRTPVDFYPSALHPSGLMKPMMPQESLNGTGCR SEDQNCVPPLQERKVTPIDSPPVWSPEGYMALQSKGYPLPHPKSSDTLAMDMRVRSPDEALPGGLSGCSSGSGHSPYALERAAHASADLP EASSKKAEKEAKLAAPRAGEQGEAMKQFDLNYGSAIIENCGSSPGEESEVGSMVGEGFIEVLTKKQRRLLEEERRKKEQAVQVPVKGRGL SSRIPPRFAKKQNNLCLEQGDVTVPGSSLGTEIWESSSQALPVQAPANDSWRKAVTAFSSTETGSAEQGFKSSQGDSGVDLSAESRESSA TSSQRSSPYGTLKPEEMSGPGLAEPKADSHKEQAPKPSEQKDSEQGSGQSKEHRPGPIGNERSLKNRKGSEGAERLQGAVVPPVNGVEIH -------------------------------------------------------------- >69228_69228_3_PRRC2B-PPAPDC3_PRRC2B_chr9_134358832_ENST00000458550_PPAPDC3_chr9_134183310_ENST00000372264_length(transcript)=4718nt_BP=3378nt ATGTCCGATCGTTTGGGGCAAATTACCAAGGGCAAGGATGGGAAAAGCAAGTACTCGACTCTCAGCCTGTTTGATAAGTATAAAGGAAAA TCAGTAGACGCGATTAGATCCTCAGTTATTCCTAGACATGGCTTACAGAGTCTTGGGAAAGTTGCTGCAGCCCGGCGCATGCCACCGCCT GCAAACCTGCCAAGCTTGAAGTCTGAAAACAAAGGAAACGACCCCAACATCGTGATAGTACCCAAGGACGGGACGGGATGGGCAAACAAG CAGGATCAGCAAGACCCAAAGAGTTCCAGTGCGACGGCCTCTCAGCCGCCGGAGTCGCTGCCGCAGCCGGGTTTGCAGAAATCTGTCTCC AATTTGCAGAAACCGACACAGTCAATCAGTCAGGAGAATACAAATTCAGTGCCAGGTGGACCAAAGTCATGGGCACAGCTGAATGGAAAG CCAGTAGGACACGAAGGTGGTTTAAGGGGCTCAAGCCGACTGTTATCCTTCTCTCCCGAGGAATTTCCGACGCTGAAAGCAGCTGGAGGG CAGGACAAGGCTGGCAAAGAAAAGGGCGTCTTAGATCTGTCGTATGGGCCAGGACCAAGCCTCCGCCCTCAGAATGTGACAAGCTGGAGG GAGGGCGGTGGGCGACACATAATTTCTGCCACGTCTCTGAGCACCTCCCCAACTGAGCTGGGCAGCAGGAACTCGAGTACGGGAGATGGA GCCCCCTCCTCGGCATGTACCAGCGATTCTAAGGACCCCTCTCTCCGCCCGGCTCAGCCTGTCCGAAAAGGGGCTTCACAGTTCATGGGA AATGTATACCACCCACCTACATACCATGACATGCTTCCTGCTTTTATGTGTTCGCCGAAGTCATCAGAAAACCAGGGTACAGTGGAACGA GGCTCTTTTCCCCTTCCTCAGCTCCGCCTTGAACCTCGAGTTCCTTTTAGACAGTTCCAGATGAATGACCAAGACGGAAAAGAAAACAGG CTGGGATTGTCTCGCCCACTCCGCCCACTAAGGCAGCTGGTGGAGCGGGCACCACGGCCCACCATTATCAATGCGGAAAACCTGAAGGGC CTTGACGATCTGGACGCCGATGCCGATGATGGCTGGGCAGGCCTCCATGAAGAAGTGGACTATTCTGAGAAACTGAAGTTCAGTGATGAT GAAGAGGAGGAAGAAGTTGTGAAGGACGGCAGGCCAAAGTGGAACAGTTGGGACCCTAGGAGGCAGCGGCAGTTGTCAATGAGCTCTGCA GACAGTGCGGACGCTAAGCGGACTCGAGAGGAAGGGAAGGACTGGGCTGAAGCAGTGGGTGCGTCCCGTGTGGTCCGAAAGGCGCCAGAC CCTCAGCCACCGCCCAGGAAGCTTCATGGCTGGGCACCAGGCCCTGACTACCAGAAGTCATCAATGGGCAGCATGTTCCGGCAACAGTCC ATCGAGGACAAGGAGGACAAGCCCCCACCAAGGCAGAAGTTCATTCAGTCAGAGATGTCCGAGGCGGTGGAGCGAGCCCGAAAGCGCCGG GAAGAAGAGGAGCGCCGAGCCCGGGAGGAGAGGCTGGCCGCCTGTGCTGCCAAACTCAAGCAGCTGGACCAGAAGTGTAAGCAGGCACGA AAGGCAGGTGAGGCCCGGAAGCAGGCAGAGAAGGAAGTGCCCTGGTCTCCAAGTGCTGAGAAGGCATCTCCCCAGGAAAACGGCCCTGCT GTCCACAAAGGCTCCCCAGAATTCCCTGCCCAAGAGACCCCCACCACATTCCCAGAAGAGGCACCCACAGTGTCCCCAGCAGTGGCACAG AGCAACAGCAGTGAGGAAGAGGCCAGAGAGGCTGGGTCCCCTGCACAGGAGTTCAAGTATCAGAAGTCCCTTCCTCCCCGATTCCAGCGC CAGCAGCAGCAACAACAGCAGGAGCAGCTGTACAAGATGCAGCACTGGCAGCCGGTGTACCCCCCGCCGTCCCACCCCCAGCGCACCTTT TACCCACACCACCCCCAGATGTTGGGCTTCGATCCCAGGTGGATGATGATGCCTTCCTACATGGACCCACGTATCACGCCCACTCGGACC CCGGTGGACTTCTACCCCTCCGCCCTGCATCCCTCAGGACTGATGAAGCCCATGATGCCCCAGGAGTCCCTCAATGGGACAGGCTGTCGC TCTGAGGATCAGAACTGTGTGCCCCCACTCCAAGAAAGAAAAGTGACCCCCATCGACTCACCCCCTGTGTGGAGCCCAGAGGGCTACATG GCACTGCAGAGCAAGGGCTACCCGCTCCCGCACCCGAAGTCGAGTGACACCTTGGCTATGGACATGCGTGTCAGATCCCCAGACGAGGCC TTGCCTGGAGGTCTTAGTGGCTGCAGCAGTGGGAGTGGCCACTCCCCCTATGCCCTGGAGCGGGCAGCCCATGCCAGTGCTGACCTTCCC GAAGCCTCCAGTAAAAAGGCAGAGAAGGAGGCCAAGTTGGCTGCTCCGAGGGCAGGTGAACAGGGAGAGGCCATGAAACAGTTTGACCTG AACTATGGAAGTGCCATCATTGAAAATTGCGGGTCCAGCCCCGGGGAGGAGAGTGAGGTGGGTTCTATGGTGGGCGAAGGCTTCATCGAA GTCCTGACCAAGAAGCAGCGCCGCCTGCTGGAGGAAGAGAGAAGAAAGAAGGAGCAGGCCGTGCAGGTGCCTGTCAAAGGTCGAGGCCTT TCCTCCCGTATTCCTCCTCGATTTGCAAAAAAGCAGAACAACTTATGTCTGGAGCAAGGTGACGTGACCGTGCCTGGCAGCAGCCTGGGC ACTGAGATCTGGGAGAGCAGCAGCCAGGCTCTCCCTGTGCAGGCCCCAGCCAACGACTCCTGGAGGAAAGCTGTCACTGCCTTCAGCAGC ACCGAGACTGGCTCTGCGGAGCAGGGTTTTAAGAGCAGCCAGGGAGATAGTGGCGTTGACTTGAGTGCCGAGTCTCGGGAGTCGTCTGCG ACCTCCTCGCAGCGCAGCTCCCCATATGGGACTCTGAAGCCAGAGGAGATGAGCGGGCCCGGCCTGGCGGAACCCAAGGCCGACAGCCAC AAGGAGCAGGCTCCAAAGCCATCTGAGCAGAAGGATTCAGAACAAGGCTCTGGACAGAGCAAGGAGCACAGACCAGGACCCATCGGCAAC GAGCGTTCTCTGAAAAACAGAAAGGGCTCGGAGGGGGCCGAGCGGCTGCAAGGGGCTGTCGTCCCGCCTGTTAACGGGGTGGAGATTCAC GTGGACTCCGTGCTGCCTGTGCCACCCATTGAATTTGGAGTCAGTCCAAAAGACTCCGATTTCAGCTTGCCACCTGGTTCTGCCTCTGGT CCTACTGGGAGTCCAGTTGTTAAACTTCAGGATGCCTTGGCCAGTAATCCCTGCTCCTGGACATCATGACGGTGGCCGGCGTGCAGAAGC TCATCAAGCGGCGCGGCCCGTACGAGACGAGCCCCAGCCTCCTGGACTACCTCACCATGGACATCTACGCCTTCCCGGCCGGGCACGCCA GCCGCGCCGCCATGGTGTCCAAGTTCTTCCTCAGCCACCTGGTGCTGGCGGTGCCCCTGCGTGTGCTGCTGGTGCTCTGGGCCCTCTGCG TGGGCCTGTCCCGCGTGATGATCGGCCGCCACCACGTCACGGACGTCCTCTCCGGCTTTGTCATCGGCTACCTCCAGTTCCGTCTGGTGG AGCTGGTCTGGATGCCCTCCAGCACCTGCCAGATGCTCATCTCTGCCTGGTGAAGCGCCCGCCGGCCCACACAAGCCTCTGGGGGCAGGG CTGGCCCTAGAGAAGGGGCAGGGGGTGGCGAGGTGGCGGGCGTGGGTGGAACAGAGCGGCCAGGAGTCAGAGCGGCCACCCCCACCTCAT CTTCCCCTCCTGGCTGGAGGCTGGCGAACCCAGGCCACCCCTCCCGGAGACAAGCGTGTTTGGCAGTGCCAGGCCTCTTGCCCCTTTGCT TGGACTCCAAGTCTCCTCTCTAGGCAGCCAGGACCCACCCATGGGGACAGCCCTATTTAGCTTCTGCTCTGGGAACAGCAAAAATCAGGA TGGTGGGAGGGGCCGAGTCTTGTCTTGTCCTTTCATCATCATGACTGTTGAGTTCTTGGCTGTGCCCATCACGCCACAGCACGACGCCTG CCAAAATGCCCCCAACCTACTGCCTGATGCAGGTGCCATTGCCATTAGCGGTCATCGACAGCTTAGGGCAGCACTTTCCAACGGGTGCCC ATGGGACACCAGCCTGCGAGATGCTTTTGGGGGAAAGGGGTTTTGTGGTTCAATAACTTTCGGAAGTGCTGCACACTCTGTCCCCAAGTT GGACATTCACAAAGGCCGTTATTGCCGTAAAGGCTCTGACAAGCCCTATAGAAAAGCTTCTTGCTAAACCTTCTTTAACCCATGTTTTCT AAACTTATTTGACCACAGAACCCTTTTCTTGGGGAACAGCTATTAACCCCCAAGGAATTATTGGTTCCTCAAGTGCGTTTTGGGAGCTGC TGCCAGAGAGCTAAAGGGCCTGGGGTGTGAGCTGACTCTCCTCTGGGGAGGCCGGGTGCACACGCCACAGCCCGAGGAAAGTGCTGGCCA CCGCCCGTGGGCATCGATGAGGCTTTGGCCCCCAGGGGCCGGACTCCGTGTGACCTAATAGGTCGTTTCCAAGTCACCCGTTTTGGATGT >69228_69228_3_PRRC2B-PPAPDC3_PRRC2B_chr9_134358832_ENST00000458550_PPAPDC3_chr9_134183310_ENST00000372264_length(amino acids)=1132AA_BP= MSDRLGQITKGKDGKSKYSTLSLFDKYKGKSVDAIRSSVIPRHGLQSLGKVAAARRMPPPANLPSLKSENKGNDPNIVIVPKDGTGWANK QDQQDPKSSSATASQPPESLPQPGLQKSVSNLQKPTQSISQENTNSVPGGPKSWAQLNGKPVGHEGGLRGSSRLLSFSPEEFPTLKAAGG QDKAGKEKGVLDLSYGPGPSLRPQNVTSWREGGGRHIISATSLSTSPTELGSRNSSTGDGAPSSACTSDSKDPSLRPAQPVRKGASQFMG NVYHPPTYHDMLPAFMCSPKSSENQGTVERGSFPLPQLRLEPRVPFRQFQMNDQDGKENRLGLSRPLRPLRQLVERAPRPTIINAENLKG LDDLDADADDGWAGLHEEVDYSEKLKFSDDEEEEEVVKDGRPKWNSWDPRRQRQLSMSSADSADAKRTREEGKDWAEAVGASRVVRKAPD PQPPPRKLHGWAPGPDYQKSSMGSMFRQQSIEDKEDKPPPRQKFIQSEMSEAVERARKRREEEERRAREERLAACAAKLKQLDQKCKQAR KAGEARKQAEKEVPWSPSAEKASPQENGPAVHKGSPEFPAQETPTTFPEEAPTVSPAVAQSNSSEEEAREAGSPAQEFKYQKSLPPRFQR QQQQQQQEQLYKMQHWQPVYPPPSHPQRTFYPHHPQMLGFDPRWMMMPSYMDPRITPTRTPVDFYPSALHPSGLMKPMMPQESLNGTGCR SEDQNCVPPLQERKVTPIDSPPVWSPEGYMALQSKGYPLPHPKSSDTLAMDMRVRSPDEALPGGLSGCSSGSGHSPYALERAAHASADLP EASSKKAEKEAKLAAPRAGEQGEAMKQFDLNYGSAIIENCGSSPGEESEVGSMVGEGFIEVLTKKQRRLLEEERRKKEQAVQVPVKGRGL SSRIPPRFAKKQNNLCLEQGDVTVPGSSLGTEIWESSSQALPVQAPANDSWRKAVTAFSSTETGSAEQGFKSSQGDSGVDLSAESRESSA TSSQRSSPYGTLKPEEMSGPGLAEPKADSHKEQAPKPSEQKDSEQGSGQSKEHRPGPIGNERSLKNRKGSEGAERLQGAVVPPVNGVEIH -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for PRRC2B-PPAPDC3 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Tgene | PPAPDC3 | chr9:134358832 | chr9:134183310 | ENST00000372264 | 0 | 2 | 70_91 | 150.33333333333334 | 272.0 | MTOR |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for PRRC2B-PPAPDC3 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for PRRC2B-PPAPDC3 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |