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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:PTCH1-TPM1 (FusionGDB2 ID:69869)

Fusion Gene Summary for PTCH1-TPM1

check button Fusion gene summary
Fusion gene informationFusion gene name: PTCH1-TPM1
Fusion gene ID: 69869
HgeneTgene
Gene symbol

PTCH1

TPM1

Gene ID

5727

7168

Gene namepatched 1tropomyosin 1
SynonymsBCNS|NBCCS|PTC|PTC1|PTCHC15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA
Cytomap

9q22.32

15q22.2

Type of geneprotein-codingprotein-coding
Descriptionprotein patched homolog 1tropomyosin alpha-1 chaincardiomyopathy, hypertrophic 3epididymis secretory protein Li 265sarcomeric tropomyosin kappa
Modification date2020031420200320
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000331920, ENST00000375274, 
ENST00000418258, ENST00000421141, 
ENST00000429896, ENST00000430669, 
ENST00000437951, ENST00000468211, 
ENST00000548379, 		ENST00000267996, 
ENST00000317516, ENST00000334895, 
ENST00000357980, ENST00000403994, 
ENST00000404484, ENST00000559281, 
ENST00000559397, ENST00000559556, 
ENST00000560445, ENST00000560959, 
ENST00000288398, ENST00000358278, 
Fusion gene scores* DoF score6 X 7 X 4=16814 X 8 X 8=896
# samples 716
** MAII scorelog2(7/168*10)=-1.26303440583379
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(16/896*10)=-2.48542682717024
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: PTCH1 [Title/Abstract] AND TPM1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointPTCH1(98224138)-TPM1(63349184), # samples:1
Anticipated loss of major functional domain due to fusion event.PTCH1-TPM1 seems lost the major protein functional domain in Hgene partner, which is a CGC due to the frame-shifted ORF.
PTCH1-TPM1 seems lost the major protein functional domain in Hgene partner, which is a tumor suppressor due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgenePTCH1

GO:0010875

positive regulation of cholesterol efflux

21931618

HgenePTCH1

GO:0072659

protein localization to plasma membrane

11278759


check buttonFusion gene breakpoints across PTCH1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across TPM1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4SARCTCGA-DX-A6B9-01APTCH1chr9

98224138

-TPM1chr15

63349184

+


Top

Fusion Gene ORF analysis for PTCH1-TPM1

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-intronENST00000331920ENST00000267996PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000331920ENST00000317516PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000331920ENST00000334895PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000331920ENST00000357980PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000331920ENST00000403994PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000331920ENST00000404484PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000331920ENST00000559281PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000331920ENST00000559397PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000331920ENST00000559556PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000331920ENST00000560445PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000331920ENST00000560959PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000375274ENST00000267996PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000375274ENST00000317516PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000375274ENST00000334895PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000375274ENST00000357980PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000375274ENST00000403994PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000375274ENST00000404484PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000375274ENST00000559281PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000375274ENST00000559397PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000375274ENST00000559556PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000375274ENST00000560445PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000375274ENST00000560959PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000418258ENST00000267996PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000418258ENST00000317516PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000418258ENST00000334895PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000418258ENST00000357980PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000418258ENST00000403994PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000418258ENST00000404484PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000418258ENST00000559281PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000418258ENST00000559397PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000418258ENST00000559556PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000418258ENST00000560445PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000418258ENST00000560959PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000421141ENST00000267996PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000421141ENST00000317516PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000421141ENST00000334895PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000421141ENST00000357980PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000421141ENST00000403994PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000421141ENST00000404484PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000421141ENST00000559281PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000421141ENST00000559397PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000421141ENST00000559556PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000421141ENST00000560445PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000421141ENST00000560959PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000429896ENST00000267996PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000429896ENST00000317516PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000429896ENST00000334895PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000429896ENST00000357980PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000429896ENST00000403994PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000429896ENST00000404484PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000429896ENST00000559281PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000429896ENST00000559397PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000429896ENST00000559556PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000429896ENST00000560445PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000429896ENST00000560959PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000430669ENST00000267996PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000430669ENST00000317516PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000430669ENST00000334895PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000430669ENST00000357980PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000430669ENST00000403994PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000430669ENST00000404484PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000430669ENST00000559281PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000430669ENST00000559397PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000430669ENST00000559556PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000430669ENST00000560445PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000430669ENST00000560959PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000437951ENST00000267996PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000437951ENST00000317516PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000437951ENST00000334895PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000437951ENST00000357980PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000437951ENST00000403994PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000437951ENST00000404484PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000437951ENST00000559281PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000437951ENST00000559397PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000437951ENST00000559556PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000437951ENST00000560445PTCH1chr9

98224138

-TPM1chr15

63349184

+
5CDS-intronENST00000437951ENST00000560959PTCH1chr9

98224138

-TPM1chr15

63349184

+
Frame-shiftENST00000331920ENST00000288398PTCH1chr9

98224138

-TPM1chr15

63349184

+
Frame-shiftENST00000331920ENST00000358278PTCH1chr9

98224138

-TPM1chr15

63349184

+
Frame-shiftENST00000375274ENST00000288398PTCH1chr9

98224138

-TPM1chr15

63349184

+
Frame-shiftENST00000375274ENST00000358278PTCH1chr9

98224138

-TPM1chr15

63349184

+
Frame-shiftENST00000421141ENST00000288398PTCH1chr9

98224138

-TPM1chr15

63349184

+
Frame-shiftENST00000421141ENST00000358278PTCH1chr9

98224138

-TPM1chr15

63349184

+
Frame-shiftENST00000429896ENST00000288398PTCH1chr9

98224138

-TPM1chr15

63349184

+
Frame-shiftENST00000429896ENST00000358278PTCH1chr9

98224138

-TPM1chr15

63349184

+
Frame-shiftENST00000437951ENST00000288398PTCH1chr9

98224138

-TPM1chr15

63349184

+
Frame-shiftENST00000437951ENST00000358278PTCH1chr9

98224138

-TPM1chr15

63349184

+
In-frameENST00000418258ENST00000288398PTCH1chr9

98224138

-TPM1chr15

63349184

+
In-frameENST00000418258ENST00000358278PTCH1chr9

98224138

-TPM1chr15

63349184

+
In-frameENST00000430669ENST00000288398PTCH1chr9

98224138

-TPM1chr15

63349184

+
In-frameENST00000430669ENST00000358278PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-3CDSENST00000468211ENST00000288398PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-3CDSENST00000468211ENST00000358278PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-3CDSENST00000548379ENST00000288398PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-3CDSENST00000548379ENST00000358278PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000468211ENST00000267996PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000468211ENST00000317516PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000468211ENST00000334895PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000468211ENST00000357980PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000468211ENST00000403994PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000468211ENST00000404484PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000468211ENST00000559281PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000468211ENST00000559397PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000468211ENST00000559556PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000468211ENST00000560445PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000468211ENST00000560959PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000548379ENST00000267996PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000548379ENST00000317516PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000548379ENST00000334895PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000548379ENST00000357980PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000548379ENST00000403994PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000548379ENST00000404484PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000548379ENST00000559281PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000548379ENST00000559397PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000548379ENST00000559556PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000548379ENST00000560445PTCH1chr9

98224138

-TPM1chr15

63349184

+
intron-intronENST00000548379ENST00000560959PTCH1chr9

98224138

-TPM1chr15

63349184

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000418258PTCH1chr998224138-ENST00000288398TPM1chr1563349184+3622276511333791088
ENST00000418258PTCH1chr998224138-ENST00000358278TPM1chr1563349184+4097276511333791088
ENST00000430669PTCH1chr998224138-ENST00000288398TPM1chr1563349184+3948309158637051039
ENST00000430669PTCH1chr998224138-ENST00000358278TPM1chr1563349184+4423309158637051039

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000418258ENST00000288398PTCH1chr998224138-TPM1chr1563349184+0.0016434650.9983565
ENST00000418258ENST00000358278PTCH1chr998224138-TPM1chr1563349184+0.0011510030.99884903
ENST00000430669ENST00000288398PTCH1chr998224138-TPM1chr1563349184+0.0010952710.9989047
ENST00000430669ENST00000358278PTCH1chr998224138-TPM1chr1563349184+0.0007610520.99923897

Top

Fusion Genomic Features for PTCH1-TPM1


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
PTCH1chr998224137-TPM1chr1563349183+2.80E-081
PTCH1chr998224137-TPM1chr1563349183+2.80E-081

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

Top

Fusion Protein Features for PTCH1-TPM1


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr9:98224138/chr15:63349184)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

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* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-162414_319012534.3333333333335Compositional biasNote=Gly-rich
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-162414_319001526.3333333333333Compositional biasNote=Gly-rich
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-162414_317502461.3333333333335Compositional biasNote=Gly-rich
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-162414_317502513.3333333333335Compositional biasNote=Gly-rich
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-162414_317502093.3333333333335Compositional biasNote=Gly-rich
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-162314_318351382.0Compositional biasNote=Gly-rich
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-162414_318352468.3333333333335Compositional biasNote=Gly-rich
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-1624438_5989012534.3333333333335DomainSSD
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-1624438_5989001526.3333333333333DomainSSD
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-1624438_5987502461.3333333333335DomainSSD
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-1624438_5987502513.3333333333335DomainSSD
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-1624438_5987502093.3333333333335DomainSSD
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-1623438_5988351382.0DomainSSD
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-1624438_5988352468.3333333333335DomainSSD
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-1624122_4369012534.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-16241_1009012534.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-1624458_4729012534.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-1624494_5019012534.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-1624523_5479012534.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-1624569_5779012534.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-1624599_7489012534.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-1624122_4369001526.3333333333333Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-16241_1009001526.3333333333333Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-1624458_4729001526.3333333333333Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-1624494_5019001526.3333333333333Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-1624523_5479001526.3333333333333Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-1624569_5779001526.3333333333333Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-1624599_7489001526.3333333333333Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-1624122_4367502461.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-16241_1007502461.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-1624458_4727502461.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-1624494_5017502461.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-1624523_5477502461.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-1624569_5777502461.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-1624599_7487502461.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-1624122_4367502513.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-16241_1007502513.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-1624458_4727502513.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-1624494_5017502513.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-1624523_5477502513.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-1624569_5777502513.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-1624599_7487502513.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-1624122_4367502093.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-16241_1007502093.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-1624458_4727502093.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-1624494_5017502093.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-1624523_5477502093.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-1624569_5777502093.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-1624599_7487502093.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-1623122_4368351382.0Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-16231_1008351382.0Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-1623458_4728351382.0Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-1623494_5018351382.0Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-1623523_5478351382.0Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-1623569_5778351382.0Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-1623599_7488351382.0Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-1624122_4368352468.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-16241_1008352468.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-1624458_4728352468.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-1624494_5018352468.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-1624523_5478352468.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-1624569_5778352468.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-1624599_7488352468.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-1624101_1219012534.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-1624437_4579012534.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-1624473_4939012534.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-1624502_5229012534.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-1624548_5689012534.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-1624578_5989012534.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-1624749_7699012534.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-1624101_1219001526.3333333333333TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-1624437_4579001526.3333333333333TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-1624473_4939001526.3333333333333TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-1624502_5229001526.3333333333333TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-1624548_5689001526.3333333333333TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-1624578_5989001526.3333333333333TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-1624749_7699001526.3333333333333TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-1624101_1217502461.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-1624437_4577502461.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-1624473_4937502461.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-1624502_5227502461.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-1624548_5687502461.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-1624578_5987502461.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-1624101_1217502513.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-1624437_4577502513.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-1624473_4937502513.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-1624502_5227502513.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-1624548_5687502513.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-1624578_5987502513.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-1624101_1217502093.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-1624437_4577502093.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-1624473_4937502093.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-1624502_5227502093.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-1624548_5687502093.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-1624578_5987502093.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-1623101_1218351382.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-1623437_4578351382.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-1623473_4938351382.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-1623502_5228351382.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-1623548_5688351382.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-1623578_5988351382.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-1623749_7698351382.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-1624101_1218352468.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-1624437_4578352468.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-1624473_4938352468.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-1624502_5228352468.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-1624548_5688352468.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-1624578_5988352468.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-1624749_7698352468.3333333333335TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-1514_310184.0Compositional biasNote=Gly-rich
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-15438_5980184.0DomainSSD
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-16241049_10559012534.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-16241077_10839012534.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-16241105_11219012534.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-16241142_11549012534.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-16241176_14479012534.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-1624770_10279012534.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-16241049_10559001526.3333333333333Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-16241077_10839001526.3333333333333Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-16241105_11219001526.3333333333333Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-16241142_11549001526.3333333333333Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-16241176_14479001526.3333333333333Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-1624770_10279001526.3333333333333Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-16241049_10557502461.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-16241077_10837502461.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-16241105_11217502461.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-16241142_11547502461.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-16241176_14477502461.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-1624770_10277502461.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-16241049_10557502513.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-16241077_10837502513.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-16241105_11217502513.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-16241142_11547502513.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-16241176_14477502513.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-1624770_10277502513.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-16241049_10557502093.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-16241077_10837502093.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-16241105_11217502093.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-16241142_11547502093.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-16241176_14477502093.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-1624770_10277502093.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-16231049_10558351382.0Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-16231077_10838351382.0Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-16231105_11218351382.0Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-16231142_11548351382.0Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-16231176_14478351382.0Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-1623770_10278351382.0Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-16241049_10558352468.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-16241077_10838352468.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-16241105_11218352468.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-16241142_11548352468.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-16241176_14478352468.3333333333335Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-1624770_10278352468.3333333333335Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-151049_10550184.0Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-151077_10830184.0Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-151105_11210184.0Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-151142_11540184.0Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-151176_14470184.0Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-15122_4360184.0Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-151_1000184.0Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-15458_4720184.0Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-15494_5010184.0Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-15523_5470184.0Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-15569_5770184.0Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-15599_7480184.0Topological domainCytoplasmic
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-15770_10270184.0Topological domainExtracellular
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-16241028_10489012534.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-16241056_10769012534.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-16241084_11049012534.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-16241122_11419012534.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000331920-16241155_11759012534.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-16241028_10489001526.3333333333333TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-16241056_10769001526.3333333333333TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-16241084_11049001526.3333333333333TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-16241122_11419001526.3333333333333TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000375274-16241155_11759001526.3333333333333TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-16241028_10487502461.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-16241056_10767502461.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-16241084_11047502461.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-16241122_11417502461.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-16241155_11757502461.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000418258-1624749_7697502461.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-16241028_10487502513.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-16241056_10767502513.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-16241084_11047502513.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-16241122_11417502513.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-16241155_11757502513.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000421141-1624749_7697502513.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-16241028_10487502093.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-16241056_10767502093.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-16241084_11047502093.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-16241122_11417502093.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-16241155_11757502093.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000429896-1624749_7697502093.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-16231028_10488351382.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-16231056_10768351382.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-16231084_11048351382.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-16231122_11418351382.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000430669-16231155_11758351382.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-16241028_10488352468.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-16241056_10768352468.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-16241084_11048352468.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-16241122_11418352468.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000437951-16241155_11758352468.3333333333335TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-15101_1210184.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-151028_10480184.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-151056_10760184.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-151084_11040184.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-151122_11410184.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-151155_11750184.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-15437_4570184.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-15473_4930184.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-15502_5220184.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-15548_5680184.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-15578_5980184.0TransmembraneHelical
HgenePTCH1chr9:98224138chr15:63349184ENST00000468211-15749_7690184.0TransmembraneHelical
TgeneTPM1chr9:98224138chr15:63349184ENST00000267996191_28480285.0Coiled coilOntology_term=ECO:0000250
TgeneTPM1chr9:98224138chr15:63349184ENST000002883981101_28480247.0Coiled coilOntology_term=ECO:0000250
TgeneTPM1chr9:98224138chr15:63349184ENST00000334895081_28444246.0Coiled coilOntology_term=ECO:0000250
TgeneTPM1chr9:98224138chr15:63349184ENST00000358278191_28480285.0Coiled coilOntology_term=ECO:0000250
TgeneTPM1chr9:98224138chr15:63349184ENST000004039941101_28480285.0Coiled coilOntology_term=ECO:0000250
TgeneTPM1chr9:98224138chr15:63349184ENST00000559397191_28480285.0Coiled coilOntology_term=ECO:0000250
TgeneTPM1chr9:98224138chr15:63349184ENST00000559556191_28480285.0Coiled coilOntology_term=ECO:0000250


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Fusion Gene Sequence for PTCH1-TPM1


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>69869_69869_1_PTCH1-TPM1_PTCH1_chr9_98224138_ENST00000418258_TPM1_chr15_63349184_ENST00000288398_length(transcript)=3622nt_BP=2765nt
AATTCAGCTCACACAGCCTCTCCCCACGCTATGGAAATGCGTCGGGAGTGAACTCCGGCGGCCGCGCTCACCACGTGGATCCCCACTTAC
TACCATTCTCGGCGGGGGTCCAGTTGGGGGAACCCGCAATATGTTGTTCCAAAGAGCGCTCGCCCCTAGCGCCCGTCCCCGAGGGTGATG
GACAGAGCAGGACTGGTTTGCTGGCTCCTGAACCTTGGGCTCCATCGCTGGGATTACGCAGCCCCTCCCTTCTCAGCTCTGGGGGGAAGG
CTACTGGCCGGAAAGCGCCGCTGTGGCTGAGAGCGAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCA
AGTTCTTGGTTGTGGGCCTCCTCATATTTGGGGCCTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGG
TGGAAGTTGGAGGACGAGTAAGTCGTGAATTAAATTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATAC
AGACCCCTAAAGAAGAAGGTGCTAATGTCCTGACCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATG
TATACATGTACAACAGGCAGTGGAAATTGGAACATTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAA
TAGAATATCTTTACCCTTGTTTGATTATTACACCTTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAG
GTAAACCTCCTTTGCGGTGGACAAACTTCGACCCTTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGG
AAATGCTGAATAAGGCTGAGGTTGGTCATGGTTACATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCA
ACAAAAATTCAACCAAACCTCTTGATATGGCCCTTGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGG
AGTTGATTGTGGGTGGCACAGTCAAGAACAGCACTGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCA
AGCAAATGTACGAGCACTTCAAGGGGTACGAGTATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGC
AGAGGACATATGTGGAGGTGGTTCATCAGAGTGTCGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACA
TCCTGAAATCCTTCTCTGACGTCAGTGTCATCCGCGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCT
GGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCTGGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCAT
TGATCGGAATTTCCTTTAACGCTGCAACAACTCAGGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCC
ACGCCTTCAGTGAAACAGGACAGAATAAAAGAATCCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCC
TCACGTCCATCAGCAATGTCACAGCCTTCTTCATGGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGGCAGCGGTAG
TAGTGGTGTTCAATTTTGCCATGGTTCTGCTCATTTTTCCTGCAATTCTCAGCATGGATTTATATCGACGCGAGGACAGGAGACTGGATA
TTTTCTGCTGTTTTACAAGCCCCTGCGTCAGCAGAGTGATTCAGGTTGAACCTCAGGCCTACACCGACACACACGACAATACCCGCTACA
GCCCCCCACCTCCCTACAGCAGCCACAGCTTTGCCCATGAAACGCAGATTACCATGCAGTCCACTGTCCAGCTCCGCACGGAGTACGACC
CCCACACGCACGTGTACTACACCACCGCTGAGCCGCGCTCCGAGATCTCTGTGCAGCCCGTCACCGTGACACAGGACACCCTCAGCTGCC
AGAGCCCAGAGAGCACCAGCTCCACAAGGGACCTGCTCTCCCAGTTCTCCGACTCCAGCCTCCACTGCCTCGAGCCCCCCTGTACGAAGT
GGACACTCTCATCTTTTGCTGAGAAGCACTATGCTCCTTTCCTCTTGAAACCAAAAGCCAAGGTAGTGGTGATCTTCCTTTTTCTGGGCT
TGCTGGGGGTCAGCCTTTATGGCACCACCCGAGTGAGAGACGGGCTGGACCTTACGGACATTGTACCTCGGGAAACCAGAGAATATGACT
TTATTGCTGCACAATTCAAATACTTTTCTTTCTACAACATGTATATAGTCACCCAGAAAGCAGACTACCCGAATATCCAGCACTTACTTT
ACGACCTACACAGGAGTTTCAGTAACGTGAAGTATGTCATGTTGGAAGAAAACAAACAGCTTCCCAAAATGTGGCTGCACTACTTCAGAG
ACTGGCTTCAGGGACTTCAGGATGCATTTGACAGTGACTGGGAAACCGGGAAAATCATGCCAAACAATTACAAGAATGGATCAGACGATG
GAGTCCTTGCCTACAAACTCCTGGTGCAAACCGGCAGCCGCGATAAGCCCATCGACATCAGCCAGGCTGAAGCCGACGTAGCTTCTCTGA
ACAGACGCATCCAGCTGGTTGAGGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGCTGAGAAGG
CAGCAGATGAGAGTGAGAGAGGCATGAAAGTCATTGAGAGTCGAGCCCAAAAAGATGAAGAAAAAATGGAAATTCAGGAGATCCAACTGA
AAGAGGCCAAGCACATTGCTGAAGATGCCGACCGCAAATATGAAGAGGTGGCCCGTAAGCTGGTCATCATTGAGAGCGACCTGGAACGTG
CAGAGGAGCGGGCTGAGCTCTCAGAAGGCCAAGTCCGACAGCTGGAAGAACAATTAAGAATAATGGATCAGACCTTGAAAGCATTAATGG
CTGCAGAGGATAAGTACTCGCAGAAGGAAGACAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAAGCTGAAGGAGGCTGAGACTCGGG
CTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAGAAAAGCATTGATGACTTAGAAGACGAGCTGTACGCTCAGAAACTGAAGTACAAAG
CCATCAGCGAGGAGCTGGACCACGCTCTCAACGATATGACTTCCATGTAAACGTTCATCCACTCTGCCTGCTTACACCCTGCCCTCATGC
TAATATAAGTTTCTTTGCTTCACTTCTCCCAAGACTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCC
AGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAGAGCCAGGCACACACTGTGCTTTCTATTGTACAGAAGCTCTTCGTTTCAGTGT

>69869_69869_1_PTCH1-TPM1_PTCH1_chr9_98224138_ENST00000418258_TPM1_chr15_63349184_ENST00000288398_length(amino acids)=1088AA_BP=884
MGEPAICCSKERSPLAPVPEGDGQSRTGLLAPEPWAPSLGLRSPSLLSSGGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLL
IFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQW
KLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEV
GHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFK
GYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQG
AVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVT
AFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSS
HSFAHETQITMQSTVQLRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAE
KHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFS
NVKYVMLEENKQLPKMWLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQAEADVASLNRRIQLVE
EELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELS
EGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDH

--------------------------------------------------------------
>69869_69869_2_PTCH1-TPM1_PTCH1_chr9_98224138_ENST00000418258_TPM1_chr15_63349184_ENST00000358278_length(transcript)=4097nt_BP=2765nt
AATTCAGCTCACACAGCCTCTCCCCACGCTATGGAAATGCGTCGGGAGTGAACTCCGGCGGCCGCGCTCACCACGTGGATCCCCACTTAC
TACCATTCTCGGCGGGGGTCCAGTTGGGGGAACCCGCAATATGTTGTTCCAAAGAGCGCTCGCCCCTAGCGCCCGTCCCCGAGGGTGATG
GACAGAGCAGGACTGGTTTGCTGGCTCCTGAACCTTGGGCTCCATCGCTGGGATTACGCAGCCCCTCCCTTCTCAGCTCTGGGGGGAAGG
CTACTGGCCGGAAAGCGCCGCTGTGGCTGAGAGCGAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCA
AGTTCTTGGTTGTGGGCCTCCTCATATTTGGGGCCTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGG
TGGAAGTTGGAGGACGAGTAAGTCGTGAATTAAATTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATAC
AGACCCCTAAAGAAGAAGGTGCTAATGTCCTGACCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATG
TATACATGTACAACAGGCAGTGGAAATTGGAACATTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAA
TAGAATATCTTTACCCTTGTTTGATTATTACACCTTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAG
GTAAACCTCCTTTGCGGTGGACAAACTTCGACCCTTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGG
AAATGCTGAATAAGGCTGAGGTTGGTCATGGTTACATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCA
ACAAAAATTCAACCAAACCTCTTGATATGGCCCTTGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGG
AGTTGATTGTGGGTGGCACAGTCAAGAACAGCACTGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCA
AGCAAATGTACGAGCACTTCAAGGGGTACGAGTATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGC
AGAGGACATATGTGGAGGTGGTTCATCAGAGTGTCGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACA
TCCTGAAATCCTTCTCTGACGTCAGTGTCATCCGCGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCT
GGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCTGGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCAT
TGATCGGAATTTCCTTTAACGCTGCAACAACTCAGGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCC
ACGCCTTCAGTGAAACAGGACAGAATAAAAGAATCCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCC
TCACGTCCATCAGCAATGTCACAGCCTTCTTCATGGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGGCAGCGGTAG
TAGTGGTGTTCAATTTTGCCATGGTTCTGCTCATTTTTCCTGCAATTCTCAGCATGGATTTATATCGACGCGAGGACAGGAGACTGGATA
TTTTCTGCTGTTTTACAAGCCCCTGCGTCAGCAGAGTGATTCAGGTTGAACCTCAGGCCTACACCGACACACACGACAATACCCGCTACA
GCCCCCCACCTCCCTACAGCAGCCACAGCTTTGCCCATGAAACGCAGATTACCATGCAGTCCACTGTCCAGCTCCGCACGGAGTACGACC
CCCACACGCACGTGTACTACACCACCGCTGAGCCGCGCTCCGAGATCTCTGTGCAGCCCGTCACCGTGACACAGGACACCCTCAGCTGCC
AGAGCCCAGAGAGCACCAGCTCCACAAGGGACCTGCTCTCCCAGTTCTCCGACTCCAGCCTCCACTGCCTCGAGCCCCCCTGTACGAAGT
GGACACTCTCATCTTTTGCTGAGAAGCACTATGCTCCTTTCCTCTTGAAACCAAAAGCCAAGGTAGTGGTGATCTTCCTTTTTCTGGGCT
TGCTGGGGGTCAGCCTTTATGGCACCACCCGAGTGAGAGACGGGCTGGACCTTACGGACATTGTACCTCGGGAAACCAGAGAATATGACT
TTATTGCTGCACAATTCAAATACTTTTCTTTCTACAACATGTATATAGTCACCCAGAAAGCAGACTACCCGAATATCCAGCACTTACTTT
ACGACCTACACAGGAGTTTCAGTAACGTGAAGTATGTCATGTTGGAAGAAAACAAACAGCTTCCCAAAATGTGGCTGCACTACTTCAGAG
ACTGGCTTCAGGGACTTCAGGATGCATTTGACAGTGACTGGGAAACCGGGAAAATCATGCCAAACAATTACAAGAATGGATCAGACGATG
GAGTCCTTGCCTACAAACTCCTGGTGCAAACCGGCAGCCGCGATAAGCCCATCGACATCAGCCAGGCTGAAGCCGACGTAGCTTCTCTGA
ACAGACGCATCCAGCTGGTTGAGGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGCTGAGAAGG
CAGCAGATGAGAGTGAGAGAGGCATGAAAGTCATTGAGAGTCGAGCCCAAAAAGATGAAGAAAAAATGGAAATTCAGGAGATCCAACTGA
AAGAGGCCAAGCACATTGCTGAAGATGCCGACCGCAAATATGAAGAGGTGGCCCGTAAGCTGGTCATCATTGAGAGCGACCTGGAACGTG
CAGAGGAGCGGGCTGAGCTCTCAGAAGGCCAAGTCCGACAGCTGGAAGAACAATTAAGAATAATGGATCAGACCTTGAAAGCATTAATGG
CTGCAGAGGATAAGTACTCGCAGAAGGAAGACAGATATGAGGAAGAGATCAAGGTCCTTTCCGACAAGCTGAAGGAGGCTGAGACTCGGG
CTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAGAAAAGCATTGATGACTTAGAAGAGAAAGTGGCTCATGCCAAAGAAGAAAACCTTA
GTATGCATCAGATGCTGGATCAGACTTTACTGGAGTTAAACAACATGTGAAAACCTCCTTAGCTGCGACCACATTCTTTCGTTTTGTTTT
GTTTTGTTTTTAAACACCTGCTTACCCCTTAAATGCAATTTATTTACTTTTACCACTGTCACAGAAACATCCACAAGATACCAGCTAGGT
CAGGGGGTGGGGAAAACACATACAAAAAGGCAAGCCCATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGCTGCCAC
ACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTAGTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATTCAAAGTGCCAATGAT
AGAGTCAACAGGAAGGTTAATGTTGGAAACACAATCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCA
ACATTGTACAATGTAGAACTCTGTCCAACACTAATTTATTTTGTCTTGAGTTTTACTACAAGATGAGACTATGGATCCCGCATGCCTGAA
TTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGCTCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTG
TAGGATAACAATCAGTGTGGATTTCCACTCTTTTCAGTCCTTCATGTTAAAGATTTAGACACCACATACAACTGGTAAAGGACGTTTTCT

>69869_69869_2_PTCH1-TPM1_PTCH1_chr9_98224138_ENST00000418258_TPM1_chr15_63349184_ENST00000358278_length(amino acids)=1088AA_BP=884
MGEPAICCSKERSPLAPVPEGDGQSRTGLLAPEPWAPSLGLRSPSLLSSGGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLL
IFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQW
KLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEV
GHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFK
GYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQG
AVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVT
AFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSS
HSFAHETQITMQSTVQLRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAE
KHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFS
NVKYVMLEENKQLPKMWLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQAEADVASLNRRIQLVE
EELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELS
EGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLSMHQMLDQ

--------------------------------------------------------------
>69869_69869_3_PTCH1-TPM1_PTCH1_chr9_98224138_ENST00000430669_TPM1_chr15_63349184_ENST00000288398_length(transcript)=3948nt_BP=3091nt
CGGCCGCGGGGGGCGGGGAGAGGGTGGCTAGGCTCGCGGGAGCTCGCCGGGCAGGGCGCCTCCCAGGAAGGCGGGGAGGGGAGCGCCTGT
TTACCCAGGAGGGCTGTGCTGATAGCACGTTCCTCGAGTTTACTTTGCTTTCCTTGAGTTTATTGTAAAGGGGTAAAGTTTTCGGATCCG
TCACGTGACCCTGACAGGTCCTGCCTATGGCGCGGCAGACCACCCACGCCGAGGGCCATGGAACTGCTTAATAGAAACAGGCTTGTAATT
GTGAGTCCGCGCTGCACTCCGCCGAAAGCCTCCGGCGGCCCAGCGCGCCGGGGTTTTTACACTTTCCGTTCCTTTTGTAAAGACGGAGGA
GGAGGAGAAGAAGAAGAAGAAAACGGAGGAGAAGAAAAAGACGACAGGGGAGACAAAGAGACCCGCAGCGACAAGGCAAGGGGGAGACGA
GGGAAGACTGGGAGAAGACGGAGGAGCGGAGGACGAGGAAAGGGGGGCCAGGGAAAAAAAAGGAATTGATGTGAAATCCAAGCCCAGCGT
CCGCGCCATCGGCACCCGCGCTCCGAGCAGGGGTTGACGGCCGGCTATGGGGAAGGCTACTGGCCGGAAAGCGCCGCTGTGGCTGAGAGC
GAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGTTGTGGGCCTCCTCATATTTGGGGC
CTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTGAATTAAA
TTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTGAC
CACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAACA
TTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCTTTACCCTTGTTTGATTATTACACC
TTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCC
TTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAATAAGGCTGAGGTTGGTCATGGTTA
CATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTCAACCAAACCTCTTGATATGGCCCT
TGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGTGGGTGGCACAGTCAAGAACAGCAC
TGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTA
TGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATATGTGGAGGTGGTTCATCAGAGTGT
CGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATCCTTCTCTGACGTCAGTGTCATCCG
CGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCT
GGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAATTTCCTTTAACGCTGCAACAACTCA
GGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGAATAAAAGAAT
CCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTCAT
GGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGGCAGCGGTAGTAGTGGTGTTCAATTTTGCCATGGTTCTGCTCAT
TTTTCCTGCAATTCTCAGCATGGATTTATATCGACGCGAGGACAGGAGACTGGATATTTTCTGCTGTTTTACAAGCCCCTGCGTCAGCAG
AGTGATTCAGGTTGAACCTCAGGCCTACACCGACACACACGACAATACCCGCTACAGCCCCCCACCTCCCTACAGCAGCCACAGCTTTGC
CCATGAAACGCAGATTACCATGCAGTCCACTGTCCAGCTCCGCACGGAGTACGACCCCCACACGCACGTGTACTACACCACCGCTGAGCC
GCGCTCCGAGATCTCTGTGCAGCCCGTCACCGTGACACAGGACACCCTCAGCTGCCAGAGCCCAGAGAGCACCAGCTCCACAAGGGACCT
GCTCTCCCAGTTCTCCGACTCCAGCCTCCACTGCCTCGAGCCCCCCTGTACGAAGTGGACACTCTCATCTTTTGCTGAGAAGCACTATGC
TCCTTTCCTCTTGAAACCAAAAGCCAAGGTAGTGGTGATCTTCCTTTTTCTGGGCTTGCTGGGGGTCAGCCTTTATGGCACCACCCGAGT
GAGAGACGGGCTGGACCTTACGGACATTGTACCTCGGGAAACCAGAGAATATGACTTTATTGCTGCACAATTCAAATACTTTTCTTTCTA
CAACATGTATATAGTCACCCAGAAAGCAGACTACCCGAATATCCAGCACTTACTTTACGACCTACACAGGAGTTTCAGTAACGTGAAGTA
TGTCATGTTGGAAGAAAACAAACAGCTTCCCAAAATGTGGCTGCACTACTTCAGAGACTGGCTTCAGGGACTTCAGGATGCATTTGACAG
TGACTGGGAAACCGGGAAAATCATGCCAAACAATTACAAGAATGGATCAGACGATGGAGTCCTTGCCTACAAACTCCTGGTGCAAACCGG
CAGCCGCGATAAGCCCATCGACATCAGCCAGGCTGAAGCCGACGTAGCTTCTCTGAACAGACGCATCCAGCTGGTTGAGGAAGAGTTGGA
TCGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGCTGAGAAGGCAGCAGATGAGAGTGAGAGAGGCATGAAAGTCAT
TGAGAGTCGAGCCCAAAAAGATGAAGAAAAAATGGAAATTCAGGAGATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGATGCCGACCG
CAAATATGAAGAGGTGGCCCGTAAGCTGGTCATCATTGAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAGCTCTCAGAAGGCCAAGT
CCGACAGCTGGAAGAACAATTAAGAATAATGGATCAGACCTTGAAAGCATTAATGGCTGCAGAGGATAAGTACTCGCAGAAGGAAGACAG
ATATGAGGAAGAGATCAAGGTCCTTTCCGACAAGCTGAAGGAGGCTGAGACTCGGGCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGA
GAAAAGCATTGATGACTTAGAAGACGAGCTGTACGCTCAGAAACTGAAGTACAAAGCCATCAGCGAGGAGCTGGACCACGCTCTCAACGA
TATGACTTCCATGTAAACGTTCATCCACTCTGCCTGCTTACACCCTGCCCTCATGCTAATATAAGTTTCTTTGCTTCACTTCTCCCAAGA
CTCCCTCGTCGAGCTGGATGTCCCACCTCTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCC

>69869_69869_3_PTCH1-TPM1_PTCH1_chr9_98224138_ENST00000430669_TPM1_chr15_63349184_ENST00000288398_length(amino acids)=1039AA_BP=835
MGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQ
LMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTA
YLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMH
WQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTT
LDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVF
LLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDR
RLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQLRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDT
LSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRETR
EYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKMWLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNG
SDDGVLAYKLLVQTGSRDKPIDISQAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQE
IQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDRYEEEIKVLSDKLKEA

--------------------------------------------------------------
>69869_69869_4_PTCH1-TPM1_PTCH1_chr9_98224138_ENST00000430669_TPM1_chr15_63349184_ENST00000358278_length(transcript)=4423nt_BP=3091nt
CGGCCGCGGGGGGCGGGGAGAGGGTGGCTAGGCTCGCGGGAGCTCGCCGGGCAGGGCGCCTCCCAGGAAGGCGGGGAGGGGAGCGCCTGT
TTACCCAGGAGGGCTGTGCTGATAGCACGTTCCTCGAGTTTACTTTGCTTTCCTTGAGTTTATTGTAAAGGGGTAAAGTTTTCGGATCCG
TCACGTGACCCTGACAGGTCCTGCCTATGGCGCGGCAGACCACCCACGCCGAGGGCCATGGAACTGCTTAATAGAAACAGGCTTGTAATT
GTGAGTCCGCGCTGCACTCCGCCGAAAGCCTCCGGCGGCCCAGCGCGCCGGGGTTTTTACACTTTCCGTTCCTTTTGTAAAGACGGAGGA
GGAGGAGAAGAAGAAGAAGAAAACGGAGGAGAAGAAAAAGACGACAGGGGAGACAAAGAGACCCGCAGCGACAAGGCAAGGGGGAGACGA
GGGAAGACTGGGAGAAGACGGAGGAGCGGAGGACGAGGAAAGGGGGGCCAGGGAAAAAAAAGGAATTGATGTGAAATCCAAGCCCAGCGT
CCGCGCCATCGGCACCCGCGCTCCGAGCAGGGGTTGACGGCCGGCTATGGGGAAGGCTACTGGCCGGAAAGCGCCGCTGTGGCTGAGAGC
GAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGTTGTGGGCCTCCTCATATTTGGGGC
CTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTGAATTAAA
TTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTGAC
CACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAACA
TTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCTTTACCCTTGTTTGATTATTACACC
TTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCC
TTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAATAAGGCTGAGGTTGGTCATGGTTA
CATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTCAACCAAACCTCTTGATATGGCCCT
TGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGTGGGTGGCACAGTCAAGAACAGCAC
TGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTA
TGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATATGTGGAGGTGGTTCATCAGAGTGT
CGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATCCTTCTCTGACGTCAGTGTCATCCG
CGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCT
GGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAATTTCCTTTAACGCTGCAACAACTCA
GGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGAATAAAAGAAT
CCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTCAT
GGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGGCAGCGGTAGTAGTGGTGTTCAATTTTGCCATGGTTCTGCTCAT
TTTTCCTGCAATTCTCAGCATGGATTTATATCGACGCGAGGACAGGAGACTGGATATTTTCTGCTGTTTTACAAGCCCCTGCGTCAGCAG
AGTGATTCAGGTTGAACCTCAGGCCTACACCGACACACACGACAATACCCGCTACAGCCCCCCACCTCCCTACAGCAGCCACAGCTTTGC
CCATGAAACGCAGATTACCATGCAGTCCACTGTCCAGCTCCGCACGGAGTACGACCCCCACACGCACGTGTACTACACCACCGCTGAGCC
GCGCTCCGAGATCTCTGTGCAGCCCGTCACCGTGACACAGGACACCCTCAGCTGCCAGAGCCCAGAGAGCACCAGCTCCACAAGGGACCT
GCTCTCCCAGTTCTCCGACTCCAGCCTCCACTGCCTCGAGCCCCCCTGTACGAAGTGGACACTCTCATCTTTTGCTGAGAAGCACTATGC
TCCTTTCCTCTTGAAACCAAAAGCCAAGGTAGTGGTGATCTTCCTTTTTCTGGGCTTGCTGGGGGTCAGCCTTTATGGCACCACCCGAGT
GAGAGACGGGCTGGACCTTACGGACATTGTACCTCGGGAAACCAGAGAATATGACTTTATTGCTGCACAATTCAAATACTTTTCTTTCTA
CAACATGTATATAGTCACCCAGAAAGCAGACTACCCGAATATCCAGCACTTACTTTACGACCTACACAGGAGTTTCAGTAACGTGAAGTA
TGTCATGTTGGAAGAAAACAAACAGCTTCCCAAAATGTGGCTGCACTACTTCAGAGACTGGCTTCAGGGACTTCAGGATGCATTTGACAG
TGACTGGGAAACCGGGAAAATCATGCCAAACAATTACAAGAATGGATCAGACGATGGAGTCCTTGCCTACAAACTCCTGGTGCAAACCGG
CAGCCGCGATAAGCCCATCGACATCAGCCAGGCTGAAGCCGACGTAGCTTCTCTGAACAGACGCATCCAGCTGGTTGAGGAAGAGTTGGA
TCGTGCCCAGGAGCGTCTGGCAACAGCTTTGCAGAAGCTGGAGGAAGCTGAGAAGGCAGCAGATGAGAGTGAGAGAGGCATGAAAGTCAT
TGAGAGTCGAGCCCAAAAAGATGAAGAAAAAATGGAAATTCAGGAGATCCAACTGAAAGAGGCCAAGCACATTGCTGAAGATGCCGACCG
CAAATATGAAGAGGTGGCCCGTAAGCTGGTCATCATTGAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAGCTCTCAGAAGGCCAAGT
CCGACAGCTGGAAGAACAATTAAGAATAATGGATCAGACCTTGAAAGCATTAATGGCTGCAGAGGATAAGTACTCGCAGAAGGAAGACAG
ATATGAGGAAGAGATCAAGGTCCTTTCCGACAAGCTGAAGGAGGCTGAGACTCGGGCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGGA
GAAAAGCATTGATGACTTAGAAGAGAAAGTGGCTCATGCCAAAGAAGAAAACCTTAGTATGCATCAGATGCTGGATCAGACTTTACTGGA
GTTAAACAACATGTGAAAACCTCCTTAGCTGCGACCACATTCTTTCGTTTTGTTTTGTTTTGTTTTTAAACACCTGCTTACCCCTTAAAT
GCAATTTATTTACTTTTACCACTGTCACAGAAACATCCACAAGATACCAGCTAGGTCAGGGGGTGGGGAAAACACATACAAAAAGGCAAG
CCCATGTCAGGGCGATCCTGGTTCAAATGTGCCATTTCCCGGGTTGATGCTGCCACACTTTGTAGAGAGTTTAGCAACACAGTGTGCTTA
GTCAGCGTAGGAATCCTCACTAAAGCAGAAGAAGTTCCATTCAAAGTGCCAATGATAGAGTCAACAGGAAGGTTAATGTTGGAAACACAA
TCAGGTGTGGATTGGTGCTACTTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCAACATTGTACAATGTAGAACTCTGTCCAACACTAA
TTTATTTTGTCTTGAGTTTTACTACAAGATGAGACTATGGATCCCGCATGCCTGAATTCACTAAAGCCAAGGGTCTGTAAGCCACGCTGC
TCTTCCGAGACTTCCATTCCTTTCTGATTGGCACACGTGCAGCTCATGACAATCTGTAGGATAACAATCAGTGTGGATTTCCACTCTTTT
CAGTCCTTCATGTTAAAGATTTAGACACCACATACAACTGGTAAAGGACGTTTTCTTGAGAGTTTTAACTATATGTAAACATTGTATAAT

>69869_69869_4_PTCH1-TPM1_PTCH1_chr9_98224138_ENST00000430669_TPM1_chr15_63349184_ENST00000358278_length(amino acids)=1039AA_BP=835
MGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQ
LMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTA
YLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMH
WQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTT
LDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVF
LLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDR
RLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQSTVQLRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDT
LSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRETR
EYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKMWLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNG
SDDGVLAYKLLVQTGSRDKPIDISQAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQE
IQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDRYEEEIKVLSDKLKEA

--------------------------------------------------------------

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Fusion Gene PPI Analysis for PTCH1-TPM1


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for PTCH1-TPM1


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for PTCH1-TPM1


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource