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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:PTPN23-MAP4 (FusionGDB2 ID:70253)

Fusion Gene Summary for PTPN23-MAP4

check button Fusion gene summary
Fusion gene informationFusion gene name: PTPN23-MAP4
Fusion gene ID: 70253
HgeneTgene
Gene symbol

PTPN23

MAP4

Gene ID

25930

4134

Gene nameprotein tyrosine phosphatase non-receptor type 23microtubule associated protein 4
SynonymsHD-PTP|HDPTP|PTP-TD14-
Cytomap

3p21.31

3p21.31

Type of geneprotein-codingprotein-coding
Descriptiontyrosine-protein phosphatase non-receptor type 23his domain-containing protein tyrosine phosphataseprotein tyrosine phosphatase TD14microtubule-associated protein 4MAP-4
Modification date2020031320200313
UniProtAcc.

Q9Y4K4

Ensembl transtripts involved in fusion geneENST00000265562, ENST00000431726, 
ENST00000264724, ENST00000420772, 
ENST00000434267, ENST00000439356, 
ENST00000441748, ENST00000462206, 
ENST00000360240, ENST00000383737, 
ENST00000395734, ENST00000426837, 
Fusion gene scores* DoF score11 X 5 X 9=49519 X 21 X 12=4788
# samples 1435
** MAII scorelog2(14/495*10)=-1.82200169802201
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(35/4788*10)=-3.77399632511117
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: PTPN23 [Title/Abstract] AND MAP4 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointPTPN23(47437707)-MAP4(47899002), # samples:1
PTPN23(47445709)-MAP4(47563300), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across PTPN23 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across MAP4 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4LGGTCGA-HT-8106PTPN23chr3

47437707

+MAP4chr3

47899002

-
ChiTaRS5.0N/AEI791502PTPN23chr3

47445709

+MAP4chr3

47563300

+


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Fusion Gene ORF analysis for PTPN23-MAP4

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-intronENST00000265562ENST00000264724PTPN23chr3

47437707

+MAP4chr3

47899002

-
5CDS-intronENST00000265562ENST00000420772PTPN23chr3

47437707

+MAP4chr3

47899002

-
5CDS-intronENST00000265562ENST00000434267PTPN23chr3

47437707

+MAP4chr3

47899002

-
5CDS-intronENST00000265562ENST00000439356PTPN23chr3

47437707

+MAP4chr3

47899002

-
5CDS-intronENST00000265562ENST00000441748PTPN23chr3

47437707

+MAP4chr3

47899002

-
5CDS-intronENST00000265562ENST00000462206PTPN23chr3

47437707

+MAP4chr3

47899002

-
5UTR-3CDSENST00000431726ENST00000360240PTPN23chr3

47437707

+MAP4chr3

47899002

-
5UTR-3CDSENST00000431726ENST00000383737PTPN23chr3

47437707

+MAP4chr3

47899002

-
5UTR-3CDSENST00000431726ENST00000395734PTPN23chr3

47437707

+MAP4chr3

47899002

-
5UTR-3CDSENST00000431726ENST00000426837PTPN23chr3

47437707

+MAP4chr3

47899002

-
5UTR-intronENST00000431726ENST00000264724PTPN23chr3

47437707

+MAP4chr3

47899002

-
5UTR-intronENST00000431726ENST00000420772PTPN23chr3

47437707

+MAP4chr3

47899002

-
5UTR-intronENST00000431726ENST00000434267PTPN23chr3

47437707

+MAP4chr3

47899002

-
5UTR-intronENST00000431726ENST00000439356PTPN23chr3

47437707

+MAP4chr3

47899002

-
5UTR-intronENST00000431726ENST00000441748PTPN23chr3

47437707

+MAP4chr3

47899002

-
5UTR-intronENST00000431726ENST00000462206PTPN23chr3

47437707

+MAP4chr3

47899002

-
In-frameENST00000265562ENST00000360240PTPN23chr3

47437707

+MAP4chr3

47899002

-
In-frameENST00000265562ENST00000383737PTPN23chr3

47437707

+MAP4chr3

47899002

-
In-frameENST00000265562ENST00000395734PTPN23chr3

47437707

+MAP4chr3

47899002

-
In-frameENST00000265562ENST00000426837PTPN23chr3

47437707

+MAP4chr3

47899002

-
intron-intronENST00000265562ENST00000264724PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000265562ENST00000360240PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000265562ENST00000383737PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000265562ENST00000395734PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000265562ENST00000420772PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000265562ENST00000426837PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000265562ENST00000434267PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000265562ENST00000439356PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000265562ENST00000441748PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000265562ENST00000462206PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000431726ENST00000264724PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000431726ENST00000360240PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000431726ENST00000383737PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000431726ENST00000395734PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000431726ENST00000420772PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000431726ENST00000426837PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000431726ENST00000434267PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000431726ENST00000439356PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000431726ENST00000441748PTPN23chr3

47445709

+MAP4chr3

47563300

+
intron-intronENST00000431726ENST00000462206PTPN23chr3

47445709

+MAP4chr3

47563300

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000265562PTPN23chr347437707+ENST00000383737MAP4chr347899002-29692361337543264
ENST00000265562PTPN23chr347437707+ENST00000395734MAP4chr347899002-26742361046357229
ENST00000265562PTPN23chr347437707+ENST00000426837MAP4chr347899002-25672361337543264
ENST00000265562PTPN23chr347437707+ENST00000360240MAP4chr347899002-17932361337543264

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000265562ENST00000383737PTPN23chr347437707+MAP4chr347899002-0.0018344070.99816567
ENST00000265562ENST00000395734PTPN23chr347437707+MAP4chr347899002-0.0038284570.99617153
ENST00000265562ENST00000426837PTPN23chr347437707+MAP4chr347899002-0.0029457970.9970542
ENST00000265562ENST00000360240PTPN23chr347437707+MAP4chr347899002-0.0035684750.99643147

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Fusion Genomic Features for PTPN23-MAP4


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for PTPN23-MAP4


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr3:47437707/chr3:47899002)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.MAP4

Q9Y4K4

FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway. {ECO:0000269|PubMed:9038372}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704248_5450100.0RegionNote=17 X 14 AA tandem repeats
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604248_5450100.0RegionNote=17 X 14 AA tandem repeats
TgeneMAP4chr3:47437707chr3:47899002ENST0000036024014191023_105310221153.0RepeatNote=Tau/MAP 3
TgeneMAP4chr3:47437707chr3:47899002ENST0000036024014191054_108510221153.0RepeatNote=Tau/MAP 4
TgeneMAP4chr3:47437707chr3:47899002ENST0000039573414181023_105310221136.0RepeatNote=Tau/MAP 3
TgeneMAP4chr3:47437707chr3:47899002ENST0000039573414181054_108510221136.0RepeatNote=Tau/MAP 4
TgeneMAP4chr3:47437707chr3:47899002ENST00000434267041023_10530100.0RepeatNote=Tau/MAP 3
TgeneMAP4chr3:47437707chr3:47899002ENST00000434267041054_10850100.0RepeatNote=Tau/MAP 4
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704248_2610100.0RepeatNote=1
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704262_2750100.0RepeatNote=2
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704276_2890100.0RepeatNote=3
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704290_3030100.0RepeatNote=4
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704304_3170100.0RepeatNote=5
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704318_3310100.0RepeatNote=6
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704332_3450100.0RepeatNote=7
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704346_3510100.0RepeatNote=8%3B truncated
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704352_3770100.0RepeatNote=26 residues 1
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704378_4030100.0RepeatNote=26 residues 2
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704408_4210100.0RepeatNote=9
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704422_4330100.0RepeatNote=10
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704434_4470100.0RepeatNote=11
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704448_4610100.0RepeatNote=12
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704462_4750100.0RepeatNote=13
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704476_4890100.0RepeatNote=14
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704490_5030100.0RepeatNote=15
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704504_5170100.0RepeatNote=16
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704532_5450100.0RepeatNote=17
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704923_9530100.0RepeatNote=Tau/MAP 1
TgeneMAP4chr3:47437707chr3:47899002ENST0000043426704992_10220100.0RepeatNote=Tau/MAP 2
TgeneMAP4chr3:47437707chr3:47899002ENST00000439356041023_10530100.0RepeatNote=Tau/MAP 3
TgeneMAP4chr3:47437707chr3:47899002ENST00000439356041054_10850100.0RepeatNote=Tau/MAP 4
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604248_2610100.0RepeatNote=1
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604262_2750100.0RepeatNote=2
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604276_2890100.0RepeatNote=3
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604290_3030100.0RepeatNote=4
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604304_3170100.0RepeatNote=5
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604318_3310100.0RepeatNote=6
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604332_3450100.0RepeatNote=7
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604346_3510100.0RepeatNote=8%3B truncated
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604352_3770100.0RepeatNote=26 residues 1
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604378_4030100.0RepeatNote=26 residues 2
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604408_4210100.0RepeatNote=9
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604422_4330100.0RepeatNote=10
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604434_4470100.0RepeatNote=11
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604448_4610100.0RepeatNote=12
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604462_4750100.0RepeatNote=13
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604476_4890100.0RepeatNote=14
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604490_5030100.0RepeatNote=15
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604504_5170100.0RepeatNote=16
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604532_5450100.0RepeatNote=17
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604923_9530100.0RepeatNote=Tau/MAP 1
TgeneMAP4chr3:47437707chr3:47899002ENST0000043935604992_10220100.0RepeatNote=Tau/MAP 2

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgenePTPN23chr3:47437707chr3:47899002ENST00000265562+225550_623531637.0Coiled coilOntology_term=ECO:0000255
HgenePTPN23chr3:47437707chr3:47899002ENST00000265562+2251509_1573531637.0Compositional biasNote=Pro-rich
HgenePTPN23chr3:47437707chr3:47899002ENST00000265562+225716_1108531637.0Compositional biasNote=Pro-rich
HgenePTPN23chr3:47437707chr3:47899002ENST00000265562+2251192_1452531637.0DomainTyrosine-protein phosphatase
HgenePTPN23chr3:47437707chr3:47899002ENST00000265562+2258_394531637.0DomainBRO1
HgenePTPN23chr3:47437707chr3:47899002ENST00000265562+225770_1130531637.0RegionNote=His
HgenePTPN23chr3:47437707chr3:47899002ENST00000265562+225953_964531637.0RegionNote=6 X 2 AA approximate tandem repeats of P-Q
HgenePTPN23chr3:47437707chr3:47899002ENST00000265562+225250_283531637.0RepeatNote=TPR 1
HgenePTPN23chr3:47437707chr3:47899002ENST00000265562+225374_407531637.0RepeatNote=TPR 2
HgenePTPN23chr3:47437707chr3:47899002ENST00000265562+225953_954531637.0RepeatNote=1
HgenePTPN23chr3:47437707chr3:47899002ENST00000265562+225955_956531637.0RepeatNote=2
HgenePTPN23chr3:47437707chr3:47899002ENST00000265562+225957_958531637.0RepeatNote=3
HgenePTPN23chr3:47437707chr3:47899002ENST00000265562+225959_960531637.0RepeatNote=4
HgenePTPN23chr3:47437707chr3:47899002ENST00000265562+225961_962531637.0RepeatNote=5
HgenePTPN23chr3:47437707chr3:47899002ENST00000265562+225963_964531637.0RepeatNote=6
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419248_54510221153.0RegionNote=17 X 14 AA tandem repeats
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418248_54510221136.0RegionNote=17 X 14 AA tandem repeats
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419248_26110221153.0RepeatNote=1
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419262_27510221153.0RepeatNote=2
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419276_28910221153.0RepeatNote=3
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419290_30310221153.0RepeatNote=4
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419304_31710221153.0RepeatNote=5
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419318_33110221153.0RepeatNote=6
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419332_34510221153.0RepeatNote=7
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419346_35110221153.0RepeatNote=8%3B truncated
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419352_37710221153.0RepeatNote=26 residues 1
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419378_40310221153.0RepeatNote=26 residues 2
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419408_42110221153.0RepeatNote=9
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419422_43310221153.0RepeatNote=10
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419434_44710221153.0RepeatNote=11
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419448_46110221153.0RepeatNote=12
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419462_47510221153.0RepeatNote=13
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419476_48910221153.0RepeatNote=14
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419490_50310221153.0RepeatNote=15
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419504_51710221153.0RepeatNote=16
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419532_54510221153.0RepeatNote=17
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419923_95310221153.0RepeatNote=Tau/MAP 1
TgeneMAP4chr3:47437707chr3:47899002ENST000003602401419992_102210221153.0RepeatNote=Tau/MAP 2
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418248_26110221136.0RepeatNote=1
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418262_27510221136.0RepeatNote=2
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418276_28910221136.0RepeatNote=3
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418290_30310221136.0RepeatNote=4
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418304_31710221136.0RepeatNote=5
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418318_33110221136.0RepeatNote=6
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418332_34510221136.0RepeatNote=7
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418346_35110221136.0RepeatNote=8%3B truncated
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418352_37710221136.0RepeatNote=26 residues 1
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418378_40310221136.0RepeatNote=26 residues 2
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418408_42110221136.0RepeatNote=9
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418422_43310221136.0RepeatNote=10
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418434_44710221136.0RepeatNote=11
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418448_46110221136.0RepeatNote=12
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418462_47510221136.0RepeatNote=13
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418476_48910221136.0RepeatNote=14
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418490_50310221136.0RepeatNote=15
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418504_51710221136.0RepeatNote=16
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418532_54510221136.0RepeatNote=17
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418923_95310221136.0RepeatNote=Tau/MAP 1
TgeneMAP4chr3:47437707chr3:47899002ENST000003957341418992_102210221136.0RepeatNote=Tau/MAP 2


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Fusion Gene Sequence for PTPN23-MAP4


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>70253_70253_1_PTPN23-MAP4_PTPN23_chr3_47437707_ENST00000265562_MAP4_chr3_47899002_ENST00000360240_length(transcript)=1793nt_BP=236nt
CGGGGCTGGGCTCGTGGCTGAGCCAGCAGCTGCAGCAGCTACGGGAGTGGCCGGGTGGCCGGCGGGTGCCAGCCGCCATGGAGGCCGTGC
CCCGCATGCCCATGATCTGGCTGGACCTGAAGGAGGCCGGTGACTTTCACTTCCAGCCAGCTGTGAAGAAGTTTGTCCTGAAGAATTATG
GAGAGAACCCAGAAGCCTACAATGAAGAACTGAAGAAGCTGGAGTTGCTCAGACAGGTTCAGATTCAGAACAAGAAAGTGGACATCTCTA
AGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGAAGTTGAACTTCA
AGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATAATGTGGGCCACCTACCTGCAGGAGGTGCTGTGAAGACTGAGGGCGGTGGCAGCG
AGGCTCCTCTGTGTCCGGGTCCCCCTGCTGGGGAGGAGCCGGCCATCTCTGAGGCAGCGCCTGAAGCTGGCGCCCCCACTTCAGCCAGTG
GCCTCAATGGCCACCCCACCCTGTCAGGGGGTGGTGACCAAAGGGAGGCCCAGACCTTGGACAGCCAGATCCAGGAGACAAGCATCTAAT
GATGACATTCTGGTCTCGTCTTCCGTCTCCCCCGTGTTCCCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGC
AGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCGACATTGTCTCCCGCCCCCCACACTTCC
CTGGCGGCCCCAACTCGGGCTCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGCA
GCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACACCTCCTCTCACTCCCCAGCCTGGGCCC
ATCTCCCTGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGAGGTTGGGAGGGGGTTGGGGTGGTTGAGGCTAAGTTGGGA
TCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTTTTGGTTCTTTGGTCCAAACCCAAAAGAAACTGACATGCCCTCCCTTCTCCCT
GGATCTACCTGGAGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
CCACAAATGGGCGCCCCCCCCTCCCCATGCAGGTGGTGTCGGGCCCTTCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGTGCTGCCTGTCC
CCATGCTTAACATACCCGCCTAGCTGCTGTCACATTTTTCTTGTTTTGTCCTTTTATTTTTTTCTAATAACCTAAAAACTGGCAAAATAG
TTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGA
GGATGTGGGCAGCTTAGGGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGCAGAGGCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGG
GCCCTTGGAGCGTGGACTGGTTGGTTTTGCCATTTTGTTGTGTGTATGCTGCTTTTCTTTTCTAACCAAGAGGCTGGTTTTGGCATCTCT

>70253_70253_1_PTPN23-MAP4_PTPN23_chr3_47437707_ENST00000265562_MAP4_chr3_47899002_ENST00000360240_length(amino acids)=264AA_BP=
MTPNLGQGSKKGPTPPAWGGGGAHLWDQRERQWLKLHGQRPVTTRNPPPLFPPGRSREKGGHVSFFWVWTKEPKKDEDRIWFSSPRSQLS
LNHPNPLPTSSTEQWRSDGARPKQGDGPRLGSERRCGAGLLLPRARKAGGKASLAGCPARRPSAHWSSGQPGKGGQGPGSPSWGRQGSVG

--------------------------------------------------------------
>70253_70253_2_PTPN23-MAP4_PTPN23_chr3_47437707_ENST00000265562_MAP4_chr3_47899002_ENST00000383737_length(transcript)=2969nt_BP=236nt
CGGGGCTGGGCTCGTGGCTGAGCCAGCAGCTGCAGCAGCTACGGGAGTGGCCGGGTGGCCGGCGGGTGCCAGCCGCCATGGAGGCCGTGC
CCCGCATGCCCATGATCTGGCTGGACCTGAAGGAGGCCGGTGACTTTCACTTCCAGCCAGCTGTGAAGAAGTTTGTCCTGAAGAATTATG
GAGAGAACCCAGAAGCCTACAATGAAGAACTGAAGAAGCTGGAGTTGCTCAGACAGGTTCAGATTCAGAACAAGAAAGTGGACATCTCTA
AGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGAAGTTGAACTTCA
AGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATAATGTGGGCCACCTACCTGCAGGAGGTGCTGTGAAGACTGAGGGCGGTGGCAGCG
AGGCTCCTCTGTGTCCGGGTCCCCCTGCTGGGGAGGAGCCGGCCATCTCTGAGGCAGCGCCTGAAGCTGGCGCCCCCACTTCAGCCAGTG
GCCTCAATGGCCACCCCACCCTGTCAGGGGGTGGTGACCAAAGGGAGGCCCAGACCTTGGACAGCCAGATCCAGGAGACAAGCATCTAAT
GATGACATTCTGGTCTCGTCTTCCGTCTCCCCCGTGTTCCCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGC
AGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCGACATTGTCTCCCGCCCCCCACACTTCC
CTGGCGGCCCCAACTCGGGCTCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGCA
GCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACACCTCCTCTCACTCCCCAGCCTGGGCCC
ATCTCCCTGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGAGGTTGGGAGGGGGTTGGGGTGGTTGAGGCTAAGTTGGGA
TCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTTTTGGTTCTTTGGTCCAAACCCAAAAGAAACTGACATGCCCTCCCTTCTCCCT
GGATCTACCTGGAGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
CCACAAATGGGCGCCCCCCCCTCCCCATGCAGGTGGTGTCGGGCCCTTCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGTGCTGCCTGTCC
CCATGCTTAACATACCCGCCTAGCTGCTGTCACATTTTTCTTGTTTTGTCCTTTTATTTTTTTCTAATAACCTAAAAACTGGCAAAATAG
TTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGA
GGATGTGGGCAGCTTAGGGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGCAGAGGCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGG
GCCCTTGGAGCGTGGACTGGTTGGTTTTGCCATTTTGTTGTGTGTATGCTGCTTTTCTTTTCTAACCAAGAGGCTGGTTTTGGCATCTCT
GTCCCATTCCCTGGGATCTGGTGGTCAGCCCTAGGATAAAAAGCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGG
CCGGCACCCACACCCTAGGACATGTAAGCCCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTTAAAAATA
AAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGGAGGGAGGAGAGGCAAGGCCCACAGAGGGCATCCCAGC
TAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAACTGTATTGACACAAAGATTCTTATTGCACTTGTATTTTTTGTATTAAAGT
TTGCATGGTTTCTAATAAAGGATTCAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAGGGGGATTGGCTG
CAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTTGGCCTCCTCATGCCCCCTCCTGACCTCTGCCCTTCTCTGGTCCTGGCATCCC
TGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTG
AGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGCTCACGGAGGAAGTGCT
GCCTGGGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGT
CAGCAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGTCAGGAGACACCTCAGGGGCAACAGCACAGGCCC
AGAGTACCTGCTGCCTCCACTGCGTCTGTCCTGGGGTCATGAGGATGCTGAGGTTGACGACAGGTTCCAGGTCCTTTCACTCCTTTGGCC
AAAGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCTCTCTAGGTAGACAACAGGAGTGGTCAGAGTTCCCTCAAAGGATCCTCCACTCCAGA
GCACCTGAGAAGGCCGGGACCAGAGGCCCTGTGTGATGTGTACTCCGCAGCTGTTTGGGGTGGGACATTTCTGTACTTCTCGATTTGCTT

>70253_70253_2_PTPN23-MAP4_PTPN23_chr3_47437707_ENST00000265562_MAP4_chr3_47899002_ENST00000383737_length(amino acids)=264AA_BP=
MTPNLGQGSKKGPTPPAWGGGGAHLWDQRERQWLKLHGQRPVTTRNPPPLFPPGRSREKGGHVSFFWVWTKEPKKDEDRIWFSSPRSQLS
LNHPNPLPTSSTEQWRSDGARPKQGDGPRLGSERRCGAGLLLPRARKAGGKASLAGCPARRPSAHWSSGQPGKGGQGPGSPSWGRQGSVG

--------------------------------------------------------------
>70253_70253_3_PTPN23-MAP4_PTPN23_chr3_47437707_ENST00000265562_MAP4_chr3_47899002_ENST00000395734_length(transcript)=2674nt_BP=236nt
CGGGGCTGGGCTCGTGGCTGAGCCAGCAGCTGCAGCAGCTACGGGAGTGGCCGGGTGGCCGGCGGGTGCCAGCCGCCATGGAGGCCGTGC
CCCGCATGCCCATGATCTGGCTGGACCTGAAGGAGGCCGGTGACTTTCACTTCCAGCCAGCTGTGAAGAAGTTTGTCCTGAAGAATTATG
GAGAGAACCCAGAAGCCTACAATGAAGAACTGAAGAAGCTGGAGTTGCTCAGACAGGTTCAGATTCAGAACAAGAAAGTGGACATCTCTA
AGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGAAGTTGAACTTCA
AGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATAATGTGGGCCACCTACCTGCAGGAGGTGCTGTGAAGATTGAGACCTACAGGCTGA
CGTTCCGGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCGACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGCCCCAACTCGGGCT
CCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCC
TCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACACCTCCTCTCACTCCCCAGCCTGGGCCCATCTCCCTGCTTTGGTCTTGC
CCCATCACTGCGCCACTGCTCCGTGGAGGAGGTTGGGAGGGGGTTGGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGAT
TCTATCCTCATCTTTTTTTGGTTCTTTGGTCCAAACCCAAAAGAAACTGACATGCCCTCCCTTCTCCCTGGATCTACCTGGAGGGAAGAG
TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCCCCC
TCCCCATGCAGGTGGTGTCGGGCCCTTCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGTGCTGCCTGTCCCCATGCTTAACATACCCGCCT
AGCTGCTGTCACATTTTTCTTGTTTTGTCCTTTTATTTTTTTCTAATAACCTAAAAACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGT
CTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCC
CTGGAGGCGGTGCGGCAGGGAAGAGGGGTGCAGAGGCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGT
TGGTTTTGCCATTTTGTTGTGTGTATGCTGCTTTTCTTTTCTAACCAAGAGGCTGGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGG
TGGTCAGCCCTAGGATAAAAAGCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCCACACCCTAGGAC
ATGTAAGCCCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTTAAAAATAAAAGGCATGAGACTAAGGCTA
TCTGCTTCCCTTATGCCCTGACTGGAGAGGGGAGGGAGGAGAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAG
TGAGGAGAAATCCCGGGAACTGTATTGACACAAAGATTCTTATTGCACTTGTATTTTTTGTATTAAAGTTTGCATGGTTTCTAATAAAGG
ATTCAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAG
GAGGCTGCCCCAGACTTGGCCTCCTCATGCCCCCTCCTGACCTCTGCCCTTCTCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGA
CCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAG
GTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGCTCACGGAGGAAGTGCTGCCTGGGCCAGGGGGACCAGC
TTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAAAGGGCCTGC
TGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGTCAGGAGACACCTCAGGGGCAACAGCACAGGCCCAGAGTACCTGCTGCCTCCACT
GCGTCTGTCCTGGGGTCATGAGGATGCTGAGGTTGACGACAGGTTCCAGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCC
CAAGTGGCGTGCTCTCTAGGTAGACAACAGGAGTGGTCAGAGTTCCCTCAAAGGATCCTCCACTCCAGAGCACCTGAGAAGGCCGGGACC
AGAGGCCCTGTGTGATGTGTACTCCGCAGCTGTTTGGGGTGGGACATTTCTGTACTTCTCGATTTGCTTATGGCTCAGCCATTACCTGTG

>70253_70253_3_PTPN23-MAP4_PTPN23_chr3_47437707_ENST00000265562_MAP4_chr3_47899002_ENST00000395734_length(amino acids)=229AA_BP=
MTPNLGQGSKKGPTPPAWGGGGAHLWDQRERQWLKLHGQRPVTTRNPPPLFPPGRSREKGGHVSFFWVWTKEPKKDEDRIWFSSPRSQLS
LNHPNPLPTSSTEQWRSDGARPKQGDGPRLGSERRCGAGLLLPRARKAGGKASLAGCPARRPSAHWSSGQPGKGGQGPGSPSWGRQGSVG

--------------------------------------------------------------
>70253_70253_4_PTPN23-MAP4_PTPN23_chr3_47437707_ENST00000265562_MAP4_chr3_47899002_ENST00000426837_length(transcript)=2567nt_BP=236nt
CGGGGCTGGGCTCGTGGCTGAGCCAGCAGCTGCAGCAGCTACGGGAGTGGCCGGGTGGCCGGCGGGTGCCAGCCGCCATGGAGGCCGTGC
CCCGCATGCCCATGATCTGGCTGGACCTGAAGGAGGCCGGTGACTTTCACTTCCAGCCAGCTGTGAAGAAGTTTGTCCTGAAGAATTATG
GAGAGAACCCAGAAGCCTACAATGAAGAACTGAAGAAGCTGGAGTTGCTCAGACAGGTTCAGATTCAGAACAAGAAAGTGGACATCTCTA
AGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGAAGTTGAACTTCA
AGGAGAAGGCCCAGGCCAAGGTGGGATCCCTCGATAATGTGGGCCACCTACCTGCAGGAGGTGCTGTGAAGACTGAGGGCGGTGGCAGCG
AGGCTCCTCTGTGTCCGGGTCCCCCTGCTGGGGAGGAGCCGGCCATCTCTGAGGCAGCGCCTGAAGCTGGCGCCCCCACTTCAGCCAGTG
GCCTCAATGGCCACCCCACCCTGTCAGGGGGTGGTGACCAAAGGGAGGCCCAGACCTTGGACAGCCAGATCCAGGAGACAAGCATCTAAT
GATGACATTCTGGTCTCGTCTTCCGTCTCCCCCGTGTTCCCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGC
AGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCGACATTGTCTCCCGCCCCCCACACTTCC
CTGGCGGCCCCAACTCGGGCTCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGCA
GCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACACCTCCTCTCACTCCCCAGCCTGGGCCC
ATCTCCCTGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGAGGTTGGGAGGGGGTTGGGGTGGTTGAGGCTAAGTTGGGA
TCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTTTTGGTTCTTTGGTCCAAACCCAAAAGAAACTGACATGCCCTCCCTTCTCCCT
GGATCTACCTGGAGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
CCACAAATGGGCGCCCCCCCCTCCCCATGCAGGTGGTGTCGGGCCCTTCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGTGCTGCCTGTCC
CCATGCTTAACATACCCGCCTAGCTGCTGTCACATTTTTCTTGTTTTGTCCTTTTATTTTTTTCTAATAACCTAAAAACTGGCAAAATAG
TTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGA
GGATGTGGGCAGCTTAGGGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGCAGAGGCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGG
GCCCTTGGAGCGTGGACTGGTTGGTTTTGCCATTTTGTTGTGTGTATGCTGCTTTTCTTTTCTAACCAAGAGGCTGGTTTTGGCATCTCT
GTCCCATTCCCTGGGATCTGGTGGTCAGCCCTAGGATAAAAAGCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGG
CCGGCACCCACACCCTAGGACATGTAAGCCCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTTAAAAATA
AAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGGAGGGAGGAGAGGCAAGGCCCACAGAGGGCATCCCAGC
TAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAACTGTATTGACACAAAGATTCTTATTGCACTTGTATTTTTTGTATTAAAGT
TTGCATGGTTTCTAATAAAGGATTCAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAGGGGGATTGGCTG
CAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTTGGCCTCCTCATGCCCCCTCCTGACCTCTGCCCTTCTCTGGTCCTGGCATCCC
TGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTG
AGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGCTCACGGAGGAAGTGCT
GCCTGGGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGT

>70253_70253_4_PTPN23-MAP4_PTPN23_chr3_47437707_ENST00000265562_MAP4_chr3_47899002_ENST00000426837_length(amino acids)=264AA_BP=
MTPNLGQGSKKGPTPPAWGGGGAHLWDQRERQWLKLHGQRPVTTRNPPPLFPPGRSREKGGHVSFFWVWTKEPKKDEDRIWFSSPRSQLS
LNHPNPLPTSSTEQWRSDGARPKQGDGPRLGSERRCGAGLLLPRARKAGGKASLAGCPARRPSAHWSSGQPGKGGQGPGSPSWGRQGSVG

--------------------------------------------------------------

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Fusion Gene PPI Analysis for PTPN23-MAP4


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for PTPN23-MAP4


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for PTPN23-MAP4


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource