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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:PUM1-BAI2 (FusionGDB2 ID:70657)

Fusion Gene Summary for PUM1-BAI2

check button Fusion gene summary
Fusion gene informationFusion gene name: PUM1-BAI2
Fusion gene ID: 70657
HgeneTgene
Gene symbol

PUM1

BAI2

Gene ID

9698

576

Gene namepumilio RNA binding family member 1adhesion G protein-coupled receptor B2
SynonymsHSPUM|PUMH|PUMH1|PUML1|SCA47BAI2
Cytomap

1p35.2

1p35.2

Type of geneprotein-codingprotein-coding
Descriptionpumilio homolog 1pumilio-1adhesion G protein-coupled receptor B2brain-specific angiogenesis inhibitor 2
Modification date2020031320200313
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000257075, ENST00000373741, 
ENST00000373742, ENST00000373747, 
ENST00000423018, ENST00000424085, 
ENST00000426105, ENST00000440538, 
ENST00000490546, 
ENST00000373655, 
ENST00000373658, ENST00000398542, 
ENST00000398547, ENST00000257070, 
ENST00000398538, ENST00000440175, 
ENST00000465256, ENST00000527361, 
ENST00000398556, 
Fusion gene scores* DoF score38 X 31 X 15=176702 X 2 X 2=8
# samples 562
** MAII scorelog2(56/17670*10)=-4.97973140249401
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(2/8*10)=1.32192809488736
Context

PubMed: PUM1 [Title/Abstract] AND BAI2 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointPUM1(31532051)-BAI2(32222416), # samples:1
PUM1(31528160)-BAI2(32222416), # samples:1
PUM1(31532146)-BAI2(32210332), # samples:1
Anticipated loss of major functional domain due to fusion event.PUM1-BAI2 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgenePUM1

GO:0010608

posttranscriptional regulation of gene expression

25100735

HgenePUM1

GO:0043488

regulation of mRNA stability

26724866

HgenePUM1

GO:0051726

regulation of cell cycle

20818387

HgenePUM1

GO:0051983

regulation of chromosome segregation

26724866

HgenePUM1

GO:1900246

positive regulation of RIG-I signaling pathway

25340845

HgenePUM1

GO:2000637

positive regulation of gene silencing by miRNA

20818387|22345517

TgeneBAI2

GO:0007186

G protein-coupled receptor signaling pathway

28891236


check buttonFusion gene breakpoints across PUM1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across BAI2 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4OVTCGA-61-2012-01APUM1chr1

31528160

-BAI2chr1

32222416

-
ChimerDB4OVTCGA-61-2012-01APUM1chr1

31532051

-BAI2chr1

32222416

-
ChimerDB4OVTCGA-61-2012-01APUM1chr1

31532146

-BAI2chr1

32210332

-


Top

Fusion Gene ORF analysis for PUM1-BAI2

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-5UTRENST00000257075ENST00000373655PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000257075ENST00000373658PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000257075ENST00000398542PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000257075ENST00000398547PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000373741ENST00000373655PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000373741ENST00000373658PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000373741ENST00000398542PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000373741ENST00000398547PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000373742ENST00000373655PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000373742ENST00000373658PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000373742ENST00000398542PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000373742ENST00000398547PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000373747ENST00000373655PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000373747ENST00000373658PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000373747ENST00000398542PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000373747ENST00000398547PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000423018ENST00000373655PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000423018ENST00000373658PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000423018ENST00000398542PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000423018ENST00000398547PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000424085ENST00000373655PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000424085ENST00000373658PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000424085ENST00000398542PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000424085ENST00000398547PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000426105ENST00000373655PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000426105ENST00000373658PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000426105ENST00000398542PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000426105ENST00000398547PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000440538ENST00000373655PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000440538ENST00000373658PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000440538ENST00000398542PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-5UTRENST00000440538ENST00000398547PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000257075ENST00000257070PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000257075ENST00000398538PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000257075ENST00000440175PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000257075ENST00000465256PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000257075ENST00000527361PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000373741ENST00000257070PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000373741ENST00000398538PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000373741ENST00000440175PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000373741ENST00000465256PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000373741ENST00000527361PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000373742ENST00000257070PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000373742ENST00000398538PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000373742ENST00000440175PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000373742ENST00000465256PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000373742ENST00000527361PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000373747ENST00000257070PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000373747ENST00000398538PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000373747ENST00000440175PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000373747ENST00000465256PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000373747ENST00000527361PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000423018ENST00000257070PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000423018ENST00000398538PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000423018ENST00000440175PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000423018ENST00000465256PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000423018ENST00000527361PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000424085ENST00000257070PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000424085ENST00000398538PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000424085ENST00000440175PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000424085ENST00000465256PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000424085ENST00000527361PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000426105ENST00000257070PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000426105ENST00000398538PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000426105ENST00000440175PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000426105ENST00000465256PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000426105ENST00000527361PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000440538ENST00000257070PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000440538ENST00000398538PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000440538ENST00000440175PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000440538ENST00000465256PUM1chr1

31532051

-BAI2chr1

32222416

-
5CDS-intronENST00000440538ENST00000527361PUM1chr1

31532051

-BAI2chr1

32222416

-
Frame-shiftENST00000257075ENST00000398556PUM1chr1

31532051

-BAI2chr1

32222416

-
Frame-shiftENST00000373747ENST00000398556PUM1chr1

31532051

-BAI2chr1

32222416

-
Frame-shiftENST00000423018ENST00000398556PUM1chr1

31532051

-BAI2chr1

32222416

-
Frame-shiftENST00000424085ENST00000398556PUM1chr1

31532051

-BAI2chr1

32222416

-
Frame-shiftENST00000426105ENST00000398556PUM1chr1

31532051

-BAI2chr1

32222416

-
Frame-shiftENST00000440538ENST00000398556PUM1chr1

31532051

-BAI2chr1

32222416

-
In-frameENST00000373741ENST00000398556PUM1chr1

31532051

-BAI2chr1

32222416

-
In-frameENST00000373742ENST00000398556PUM1chr1

31532051

-BAI2chr1

32222416

-
intron-3CDSENST00000257075ENST00000373655PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000257075ENST00000373658PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000257075ENST00000398542PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000257075ENST00000398547PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000257075ENST00000398556PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-3CDSENST00000257075ENST00000398556PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000373741ENST00000373655PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000373741ENST00000373658PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000373741ENST00000398542PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000373741ENST00000398547PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000373741ENST00000398556PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-3CDSENST00000373741ENST00000398556PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000373742ENST00000373655PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000373742ENST00000373658PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000373742ENST00000398542PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000373742ENST00000398547PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000373742ENST00000398556PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-3CDSENST00000373742ENST00000398556PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000373747ENST00000373655PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000373747ENST00000373658PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000373747ENST00000398542PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000373747ENST00000398547PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000373747ENST00000398556PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-3CDSENST00000373747ENST00000398556PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000423018ENST00000373655PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000423018ENST00000373658PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000423018ENST00000398542PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000423018ENST00000398547PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000423018ENST00000398556PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-3CDSENST00000423018ENST00000398556PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000424085ENST00000373655PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000424085ENST00000373658PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000424085ENST00000398542PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000424085ENST00000398547PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000424085ENST00000398556PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-3CDSENST00000424085ENST00000398556PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000426105ENST00000373655PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000426105ENST00000373658PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000426105ENST00000398542PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000426105ENST00000398547PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000426105ENST00000398556PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-3CDSENST00000426105ENST00000398556PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000440538ENST00000373655PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000440538ENST00000373658PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000440538ENST00000398542PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000440538ENST00000398547PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000440538ENST00000398556PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-3CDSENST00000440538ENST00000398556PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000490546ENST00000373655PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000490546ENST00000373658PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000490546ENST00000398542PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000490546ENST00000398547PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-3CDSENST00000490546ENST00000398556PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-3CDSENST00000490546ENST00000398556PUM1chr1

31532051

-BAI2chr1

32222416

-
intron-3CDSENST00000490546ENST00000398556PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-5UTRENST00000257075ENST00000373655PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000257075ENST00000373658PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000257075ENST00000398542PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000257075ENST00000398547PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000373741ENST00000373655PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000373741ENST00000373658PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000373741ENST00000398542PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000373741ENST00000398547PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000373742ENST00000373655PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000373742ENST00000373658PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000373742ENST00000398542PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000373742ENST00000398547PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000373747ENST00000373655PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000373747ENST00000373658PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000373747ENST00000398542PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000373747ENST00000398547PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000423018ENST00000373655PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000423018ENST00000373658PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000423018ENST00000398542PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000423018ENST00000398547PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000424085ENST00000373655PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000424085ENST00000373658PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000424085ENST00000398542PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000424085ENST00000398547PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000426105ENST00000373655PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000426105ENST00000373658PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000426105ENST00000398542PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000426105ENST00000398547PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000440538ENST00000373655PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000440538ENST00000373658PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000440538ENST00000398542PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000440538ENST00000398547PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000490546ENST00000373655PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000490546ENST00000373655PUM1chr1

31532051

-BAI2chr1

32222416

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intron-5UTRENST00000490546ENST00000373658PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000490546ENST00000373658PUM1chr1

31532051

-BAI2chr1

32222416

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intron-5UTRENST00000490546ENST00000398542PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-5UTRENST00000490546ENST00000398542PUM1chr1

31532051

-BAI2chr1

32222416

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intron-5UTRENST00000490546ENST00000398547PUM1chr1

31528160

-BAI2chr1

32222416

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intron-5UTRENST00000490546ENST00000398547PUM1chr1

31532051

-BAI2chr1

32222416

-
intron-intronENST00000257075ENST00000257070PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000257075ENST00000257070PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000257075ENST00000398538PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000257075ENST00000398538PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000257075ENST00000440175PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000257075ENST00000440175PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000257075ENST00000465256PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000257075ENST00000465256PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000257075ENST00000527361PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000257075ENST00000527361PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000373741ENST00000257070PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000373741ENST00000257070PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000373741ENST00000398538PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000373741ENST00000398538PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000373741ENST00000440175PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000373741ENST00000440175PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000373741ENST00000465256PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000373741ENST00000465256PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000373741ENST00000527361PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000373741ENST00000527361PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000373742ENST00000257070PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000373742ENST00000257070PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000373742ENST00000398538PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000373742ENST00000398538PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000373742ENST00000440175PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000373742ENST00000440175PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000373742ENST00000465256PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000373742ENST00000465256PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000373742ENST00000527361PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000373742ENST00000527361PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000373747ENST00000257070PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000373747ENST00000257070PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000373747ENST00000398538PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000373747ENST00000398538PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000373747ENST00000440175PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000373747ENST00000440175PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000373747ENST00000465256PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000373747ENST00000465256PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000373747ENST00000527361PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000373747ENST00000527361PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000423018ENST00000257070PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000423018ENST00000257070PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000423018ENST00000398538PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000423018ENST00000398538PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000423018ENST00000440175PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000423018ENST00000440175PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000423018ENST00000465256PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000423018ENST00000465256PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000423018ENST00000527361PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000423018ENST00000527361PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000424085ENST00000257070PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000424085ENST00000257070PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000424085ENST00000398538PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000424085ENST00000398538PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-intronENST00000424085ENST00000440175PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000424085ENST00000440175PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-intronENST00000424085ENST00000465256PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000424085ENST00000465256PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-intronENST00000424085ENST00000527361PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000424085ENST00000527361PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-intronENST00000426105ENST00000257070PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000426105ENST00000257070PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-intronENST00000426105ENST00000398538PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000426105ENST00000398538PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000426105ENST00000440175PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000426105ENST00000440175PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-intronENST00000426105ENST00000465256PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000426105ENST00000465256PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-intronENST00000426105ENST00000527361PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000426105ENST00000527361PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000440538ENST00000257070PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000440538ENST00000257070PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000440538ENST00000398538PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000440538ENST00000398538PUM1chr1

31532146

-BAI2chr1

32210332

-
intron-intronENST00000440538ENST00000440175PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000440538ENST00000440175PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000440538ENST00000465256PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000440538ENST00000465256PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000440538ENST00000527361PUM1chr1

31528160

-BAI2chr1

32222416

-
intron-intronENST00000440538ENST00000527361PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000490546ENST00000257070PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000490546ENST00000257070PUM1chr1

31532051

-BAI2chr1

32222416

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intron-intronENST00000490546ENST00000257070PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000490546ENST00000398538PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000490546ENST00000398538PUM1chr1

31532051

-BAI2chr1

32222416

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intron-intronENST00000490546ENST00000398538PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000490546ENST00000440175PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000490546ENST00000440175PUM1chr1

31532051

-BAI2chr1

32222416

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intron-intronENST00000490546ENST00000440175PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000490546ENST00000465256PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000490546ENST00000465256PUM1chr1

31532051

-BAI2chr1

32222416

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intron-intronENST00000490546ENST00000465256PUM1chr1

31532146

-BAI2chr1

32210332

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intron-intronENST00000490546ENST00000527361PUM1chr1

31528160

-BAI2chr1

32222416

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intron-intronENST00000490546ENST00000527361PUM1chr1

31532051

-BAI2chr1

32222416

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intron-intronENST00000490546ENST00000527361PUM1chr1

31532146

-BAI2chr1

32210332

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check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000373741PUM1chr131532051-ENST00000398556BAI2chr132222416-545367711351491678
ENST00000373742PUM1chr131532051-ENST00000398556BAI2chr132222416-5247471049431647

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000373741ENST00000398556PUM1chr131532051-BAI2chr132222416-0.0058248260.99417526
ENST00000373742ENST00000398556PUM1chr131532051-BAI2chr132222416-0.0049137520.99508625

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Fusion Genomic Features for PUM1-BAI2


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for PUM1-BAI2


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:31532051/chr1:32222416)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneBAI2chr1:31532051chr1:32222416ENST00000257070232129_13471552.0Compositional biasNote=Poly-Glu
TgeneBAI2chr1:31532051chr1:32222416ENST000002570702321315_131871552.0Compositional biasNote=Poly-Pro
TgeneBAI2chr1:31532051chr1:32222416ENST000002570702321364_137071552.0Compositional biasNote=Poly-Gly
TgeneBAI2chr1:31532051chr1:32222416ENST000002570702321425_143071552.0Compositional biasNote=Poly-Pro
TgeneBAI2chr1:31532051chr1:32222416ENST00000257070232189_19271552.0Compositional biasNote=Poly-Asn
TgeneBAI2chr1:31532051chr1:32222416ENST00000257070232234_23771552.0Compositional biasNote=Poly-Thr
TgeneBAI2chr1:31532051chr1:32222416ENST00000373655233129_13471585.0Compositional biasNote=Poly-Glu
TgeneBAI2chr1:31532051chr1:32222416ENST000003736552331315_131871585.0Compositional biasNote=Poly-Pro
TgeneBAI2chr1:31532051chr1:32222416ENST000003736552331364_137071585.0Compositional biasNote=Poly-Gly
TgeneBAI2chr1:31532051chr1:32222416ENST000003736552331425_143071585.0Compositional biasNote=Poly-Pro
TgeneBAI2chr1:31532051chr1:32222416ENST00000373655233189_19271585.0Compositional biasNote=Poly-Asn
TgeneBAI2chr1:31532051chr1:32222416ENST00000373655233234_23771585.0Compositional biasNote=Poly-Thr
TgeneBAI2chr1:31532051chr1:32222416ENST00000373658233129_13471586.0Compositional biasNote=Poly-Glu
TgeneBAI2chr1:31532051chr1:32222416ENST000003736582331315_131871586.0Compositional biasNote=Poly-Pro
TgeneBAI2chr1:31532051chr1:32222416ENST000003736582331364_137071586.0Compositional biasNote=Poly-Gly
TgeneBAI2chr1:31532051chr1:32222416ENST000003736582331425_143071586.0Compositional biasNote=Poly-Pro
TgeneBAI2chr1:31532051chr1:32222416ENST00000373658233189_19271586.0Compositional biasNote=Poly-Asn
TgeneBAI2chr1:31532051chr1:32222416ENST00000373658233234_23771586.0Compositional biasNote=Poly-Thr
TgeneBAI2chr1:31532051chr1:32222416ENST00000527361030129_13471552.0Compositional biasNote=Poly-Glu
TgeneBAI2chr1:31532051chr1:32222416ENST000005273610301315_131871552.0Compositional biasNote=Poly-Pro
TgeneBAI2chr1:31532051chr1:32222416ENST000005273610301364_137071552.0Compositional biasNote=Poly-Gly
TgeneBAI2chr1:31532051chr1:32222416ENST000005273610301425_143071552.0Compositional biasNote=Poly-Pro
TgeneBAI2chr1:31532051chr1:32222416ENST00000527361030189_19271552.0Compositional biasNote=Poly-Asn
TgeneBAI2chr1:31532051chr1:32222416ENST00000527361030234_23771552.0Compositional biasNote=Poly-Thr
TgeneBAI2chr1:31532051chr1:32222416ENST00000257070232309_36271552.0DomainTSP type-1 1
TgeneBAI2chr1:31532051chr1:32222416ENST00000257070232364_41771552.0DomainTSP type-1 2
TgeneBAI2chr1:31532051chr1:32222416ENST00000257070232419_47271552.0DomainTSP type-1 3
TgeneBAI2chr1:31532051chr1:32222416ENST00000257070232475_52871552.0DomainTSP type-1 4
TgeneBAI2chr1:31532051chr1:32222416ENST00000257070232871_92371552.0DomainGPS
TgeneBAI2chr1:31532051chr1:32222416ENST00000373655233309_36271585.0DomainTSP type-1 1
TgeneBAI2chr1:31532051chr1:32222416ENST00000373655233364_41771585.0DomainTSP type-1 2
TgeneBAI2chr1:31532051chr1:32222416ENST00000373655233419_47271585.0DomainTSP type-1 3
TgeneBAI2chr1:31532051chr1:32222416ENST00000373655233475_52871585.0DomainTSP type-1 4
TgeneBAI2chr1:31532051chr1:32222416ENST00000373655233871_92371585.0DomainGPS
TgeneBAI2chr1:31532051chr1:32222416ENST00000373658233309_36271586.0DomainTSP type-1 1
TgeneBAI2chr1:31532051chr1:32222416ENST00000373658233364_41771586.0DomainTSP type-1 2
TgeneBAI2chr1:31532051chr1:32222416ENST00000373658233419_47271586.0DomainTSP type-1 3
TgeneBAI2chr1:31532051chr1:32222416ENST00000373658233475_52871586.0DomainTSP type-1 4
TgeneBAI2chr1:31532051chr1:32222416ENST00000373658233871_92371586.0DomainGPS
TgeneBAI2chr1:31532051chr1:32222416ENST00000527361030309_36271552.0DomainTSP type-1 1
TgeneBAI2chr1:31532051chr1:32222416ENST00000527361030364_41771552.0DomainTSP type-1 2
TgeneBAI2chr1:31532051chr1:32222416ENST00000527361030419_47271552.0DomainTSP type-1 3
TgeneBAI2chr1:31532051chr1:32222416ENST00000527361030475_52871552.0DomainTSP type-1 4
TgeneBAI2chr1:31532051chr1:32222416ENST00000527361030871_92371552.0DomainGPS
TgeneBAI2chr1:31532051chr1:32222416ENST000002570702321016_103671552.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST000002570702321058_107871552.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST000002570702321100_112171552.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST000002570702321143_115371552.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST000002570702321175_158571552.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST0000025707023233_93671552.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST00000257070232958_96571552.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST00000257070232987_99471552.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST000003736552331016_103671585.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST000003736552331058_107871585.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST000003736552331100_112171585.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST000003736552331143_115371585.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST000003736552331175_158571585.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST0000037365523333_93671585.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST00000373655233958_96571585.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST00000373655233987_99471585.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST000003736582331016_103671586.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST000003736582331058_107871586.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST000003736582331100_112171586.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST000003736582331143_115371586.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST000003736582331175_158571586.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST0000037365823333_93671586.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST00000373658233958_96571586.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST00000373658233987_99471586.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST000005273610301016_103671552.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST000005273610301058_107871552.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST000005273610301100_112171552.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST000005273610301143_115371552.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST000005273610301175_158571552.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST0000052736103033_93671552.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST00000527361030958_96571552.0Topological domainCytoplasmic
TgeneBAI2chr1:31532051chr1:32222416ENST00000527361030987_99471552.0Topological domainExtracellular
TgeneBAI2chr1:31532051chr1:32222416ENST000002570702321037_105771552.0TransmembraneHelical%3B Name%3D4
TgeneBAI2chr1:31532051chr1:32222416ENST000002570702321079_109971552.0TransmembraneHelical%3B Name%3D5
TgeneBAI2chr1:31532051chr1:32222416ENST000002570702321122_114271552.0TransmembraneHelical%3B Name%3D6
TgeneBAI2chr1:31532051chr1:32222416ENST000002570702321154_117471552.0TransmembraneHelical%3B Name%3D7
TgeneBAI2chr1:31532051chr1:32222416ENST00000257070232937_95771552.0TransmembraneHelical%3B Name%3D1
TgeneBAI2chr1:31532051chr1:32222416ENST00000257070232966_98671552.0TransmembraneHelical%3B Name%3D2
TgeneBAI2chr1:31532051chr1:32222416ENST00000257070232995_101571552.0TransmembraneHelical%3B Name%3D3
TgeneBAI2chr1:31532051chr1:32222416ENST000003736552331037_105771585.0TransmembraneHelical%3B Name%3D4
TgeneBAI2chr1:31532051chr1:32222416ENST000003736552331079_109971585.0TransmembraneHelical%3B Name%3D5
TgeneBAI2chr1:31532051chr1:32222416ENST000003736552331122_114271585.0TransmembraneHelical%3B Name%3D6
TgeneBAI2chr1:31532051chr1:32222416ENST000003736552331154_117471585.0TransmembraneHelical%3B Name%3D7
TgeneBAI2chr1:31532051chr1:32222416ENST00000373655233937_95771585.0TransmembraneHelical%3B Name%3D1
TgeneBAI2chr1:31532051chr1:32222416ENST00000373655233966_98671585.0TransmembraneHelical%3B Name%3D2
TgeneBAI2chr1:31532051chr1:32222416ENST00000373655233995_101571585.0TransmembraneHelical%3B Name%3D3
TgeneBAI2chr1:31532051chr1:32222416ENST000003736582331037_105771586.0TransmembraneHelical%3B Name%3D4
TgeneBAI2chr1:31532051chr1:32222416ENST000003736582331079_109971586.0TransmembraneHelical%3B Name%3D5
TgeneBAI2chr1:31532051chr1:32222416ENST000003736582331122_114271586.0TransmembraneHelical%3B Name%3D6
TgeneBAI2chr1:31532051chr1:32222416ENST000003736582331154_117471586.0TransmembraneHelical%3B Name%3D7
TgeneBAI2chr1:31532051chr1:32222416ENST00000373658233937_95771586.0TransmembraneHelical%3B Name%3D1
TgeneBAI2chr1:31532051chr1:32222416ENST00000373658233966_98671586.0TransmembraneHelical%3B Name%3D2
TgeneBAI2chr1:31532051chr1:32222416ENST00000373658233995_101571586.0TransmembraneHelical%3B Name%3D3
TgeneBAI2chr1:31532051chr1:32222416ENST000005273610301037_105771552.0TransmembraneHelical%3B Name%3D4
TgeneBAI2chr1:31532051chr1:32222416ENST000005273610301079_109971552.0TransmembraneHelical%3B Name%3D5
TgeneBAI2chr1:31532051chr1:32222416ENST000005273610301122_114271552.0TransmembraneHelical%3B Name%3D6
TgeneBAI2chr1:31532051chr1:32222416ENST000005273610301154_117471552.0TransmembraneHelical%3B Name%3D7
TgeneBAI2chr1:31532051chr1:32222416ENST00000527361030937_95771552.0TransmembraneHelical%3B Name%3D1
TgeneBAI2chr1:31532051chr1:32222416ENST00000527361030966_98671552.0TransmembraneHelical%3B Name%3D2
TgeneBAI2chr1:31532051chr1:32222416ENST00000527361030995_101571552.0TransmembraneHelical%3B Name%3D3

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgenePUM1chr1:31532051chr1:32222416ENST00000257075-222393_6131211187.0Compositional biasNote=Ala-rich
HgenePUM1chr1:31532051chr1:32222416ENST00000257075-222475_5231211187.0Compositional biasNote=Gln-rich
HgenePUM1chr1:31532051chr1:32222416ENST00000257075-222642_8151211187.0Compositional biasNote=Ser-rich
HgenePUM1chr1:31532051chr1:32222416ENST00000426105-222393_6131211189.0Compositional biasNote=Ala-rich
HgenePUM1chr1:31532051chr1:32222416ENST00000426105-222475_5231211189.0Compositional biasNote=Gln-rich
HgenePUM1chr1:31532051chr1:32222416ENST00000426105-222642_8151211189.0Compositional biasNote=Ser-rich
HgenePUM1chr1:31532051chr1:32222416ENST00000440538-222393_6131211163.0Compositional biasNote=Ala-rich
HgenePUM1chr1:31532051chr1:32222416ENST00000440538-222475_5231211163.0Compositional biasNote=Gln-rich
HgenePUM1chr1:31532051chr1:32222416ENST00000440538-222642_8151211163.0Compositional biasNote=Ser-rich
HgenePUM1chr1:31532051chr1:32222416ENST00000257075-222828_11681211187.0DomainPUM-HD
HgenePUM1chr1:31532051chr1:32222416ENST00000426105-222828_11681211189.0DomainPUM-HD
HgenePUM1chr1:31532051chr1:32222416ENST00000440538-222828_11681211163.0DomainPUM-HD
HgenePUM1chr1:31532051chr1:32222416ENST00000257075-2221028_10631211187.0RepeatPumilio 6
HgenePUM1chr1:31532051chr1:32222416ENST00000257075-2221064_10991211187.0RepeatPumilio 7
HgenePUM1chr1:31532051chr1:32222416ENST00000257075-2221103_11421211187.0RepeatPumilio 8
HgenePUM1chr1:31532051chr1:32222416ENST00000257075-222848_8831211187.0RepeatPumilio 1
HgenePUM1chr1:31532051chr1:32222416ENST00000257075-222884_9191211187.0RepeatPumilio 2
HgenePUM1chr1:31532051chr1:32222416ENST00000257075-222920_9551211187.0RepeatPumilio 3
HgenePUM1chr1:31532051chr1:32222416ENST00000257075-222956_9911211187.0RepeatPumilio 4
HgenePUM1chr1:31532051chr1:32222416ENST00000257075-222992_10271211187.0RepeatPumilio 5
HgenePUM1chr1:31532051chr1:32222416ENST00000426105-2221028_10631211189.0RepeatPumilio 6
HgenePUM1chr1:31532051chr1:32222416ENST00000426105-2221064_10991211189.0RepeatPumilio 7
HgenePUM1chr1:31532051chr1:32222416ENST00000426105-2221103_11421211189.0RepeatPumilio 8
HgenePUM1chr1:31532051chr1:32222416ENST00000426105-222848_8831211189.0RepeatPumilio 1
HgenePUM1chr1:31532051chr1:32222416ENST00000426105-222884_9191211189.0RepeatPumilio 2
HgenePUM1chr1:31532051chr1:32222416ENST00000426105-222920_9551211189.0RepeatPumilio 3
HgenePUM1chr1:31532051chr1:32222416ENST00000426105-222956_9911211189.0RepeatPumilio 4
HgenePUM1chr1:31532051chr1:32222416ENST00000426105-222992_10271211189.0RepeatPumilio 5
HgenePUM1chr1:31532051chr1:32222416ENST00000440538-2221028_10631211163.0RepeatPumilio 6
HgenePUM1chr1:31532051chr1:32222416ENST00000440538-2221064_10991211163.0RepeatPumilio 7
HgenePUM1chr1:31532051chr1:32222416ENST00000440538-2221103_11421211163.0RepeatPumilio 8
HgenePUM1chr1:31532051chr1:32222416ENST00000440538-222848_8831211163.0RepeatPumilio 1
HgenePUM1chr1:31532051chr1:32222416ENST00000440538-222884_9191211163.0RepeatPumilio 2
HgenePUM1chr1:31532051chr1:32222416ENST00000440538-222920_9551211163.0RepeatPumilio 3
HgenePUM1chr1:31532051chr1:32222416ENST00000440538-222956_9911211163.0RepeatPumilio 4
HgenePUM1chr1:31532051chr1:32222416ENST00000440538-222992_10271211163.0RepeatPumilio 5


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Fusion Gene Sequence for PUM1-BAI2


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>70657_70657_1_PUM1-BAI2_PUM1_chr1_31532051_ENST00000373741_BAI2_chr1_32222416_ENST00000398556_length(transcript)=5453nt_BP=677nt
AACCCCGCGTGCCCAGCTCCAGGCCGTGTTCTCCCAGGTGCGGGCCGGCGGGACCCCGCCTTCGGCCCTGGCGGCGCGCGCTCGCCTAGC
GGGCGGGCACTCGCGCGCAGCGTTTGTGTTGCCTGCGAGTTTCCCGAGTTCACACAGGCCCTGGGTTGGCATGGCAACCAGGCAACCTGT
TCCAGAGCCGCCAGCCTTCTCCGCACATGCCGCTGCCACCGCCGGGGCCGGGGCCGGAGCCTATCCCAGGATGCACCGCGCCAACCCAGT
CCCCAGTGGGCCGCCATGTTGTCGGAGTGAAAGGTGTTGGTGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGG
ACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAG
CGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCC
AGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATA
GCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACATCAGGGCAAGGGACATAGGATGACCCCAGCCTGTCCCCTCTTACTGT
CTGTGATTCTGTCCCTGCGCCTGGCCACCGCCTTCGACCCCGCCCCCAGTGCCTGCTCTGCCCTGGCCTCGGGTGTGCTCTACGGGGCCT
TCTCGCTGCAGGACCTCTTTCCTACCATCGCCTCGGGCTGCTCCTGGACCCTGGAGAACCCTGACCCCACCAAGTACTCCCTCTACCTGC
GCTTCAACCGCCAGGAGCAGGTGTGCGCACACTTTGCCCCCCGCCTGCTGCCCCTGGACCACTACCTGGTCAACTTTACCTGCCTGCGGC
CTAGCCCCGAGGAGGCGGTGGCCCAGGCGGAGTCAGAGGTGGGGCGGCCAGAAGAGGAGGAGGCAGAGGCGGCAGCGGGGTTGGAGCTGT
GCAGCGGCTCAGGCCCCTTTACCTTCCTGCACTTCGACAAGAACTTCGTGCAGCTGTGCCTGTCGGCTGAGCCCTCCGAGGCCCCGCGCC
TGCTGGCGCCCGCTGCCCTAGCCTTCCGCTTTGTCGAGGTCTTGCTCATCAACAACAACAACTCTAGCCAATTCACCTGTGGTGTGCTCT
GCCGCTGGAGTGAGGAGTGTGGCCGCGCTGCCGGCAGGGCCTGCGGCTTTGCTCAGCCAGGCTGCAGCTGCCCTGGAGAGGCGGGGGCCG
GCTCCACCACCACCACATCTCCAGGCCCTCCTGCTGCCCACACCCTGTCCAATGCCCTGGTGCCCGGGGGCCCAGCCCCACCTGCTGAGG
CCGATTTGCACTCGGGGAGCAGCAATGATCTGTTCACAACCGAGATGAGATATGGTGAGGAGCCGGAAGAGGAACCGAAAGTGAAAACCC
AGTGGCCGAGGTCTGCAGATGAGCCTGGGCTATACATGGCGCAGACAGTGCACGGCGTGTGGGAGGAGTGGGGGTCCTGGAGCCTGTGCT
CCCGCAGCTGCGGGCGGGGGTCCCGGAGCCGGATGCGGACCTGCGTGCCCCCCCAGCACGGCGGCAAGGCCTGCGAGGGTCCTGAGCTGC
AGACTAAGCTCTGCAGTATGGCTGCCTGCCCGGTGGAAGGCCAGTGGTTAGAATGGGGTCCCTGGGGCCCATGCTCCACGTCCTGTGCCA
ATGGGACCCAACAGCGCAGCCGGAAGTGCAGCGTGGCGGGCCCAGCCTGGGCCACATGCACGGGTGCCCTCACTGACACCCGGGAGTGCA
GCAACCTCGAGTGCCCGGCCACTGATAGCAAGTGGGGGCCATGGAATGCGTGGAGCCTGTGCTCTAAGACGTGTGACACAGGCTGGCAGC
GCCGCTTCCGCATGTGCCAGGCCACGGGCACGCAGGGCTACCCCTGCGAGGGCACCGGAGAGGAGGTGAAGCCTTGTAGTGAGAAGAGGT
GTCCAGCCTTCCATGAGATGTGCAGGGATGAGTACGTGATGCTGATGACGTGGAAGAAGGCAGCTGCTGGCGAGATCATCTACAACAAGT
GCCCCCCGAATGCCTCAGGGTCTGCCAGCCGCCGCTGTCTCCTCAGTGCCCAAGGCGTGGCGTACTGGGGGCTGCCCAGCTTTGCTCGCT
GCATCTCCCATGAGTACCGCTACCTGTATCTGTCACTTAGGGAGCACCTGGCCAAGGGGCAGCGCATGCTGGCAGGCGAGGGCATGTCGC
AGGTGGTGCGCAGCCTGCAGGAGCTACTGGCCCGGCGCACCTACTATAGTGGGGACCTGCTCTTCTCTGTGGACATTCTGAGGAATGTCA
CTGACACCTTTAAGAGGGCCACCTACGTGCCCTCGGCTGATGATGTGCAGCGCTTCTTCCAGGTGGTGAGCTTCATGGTGGATGCGGAAA
ACAAGGAGAAGTGGGACGATGCTCAGCAGGTGTCCCCTGGCTCTGTGCACCTGCTCCGTGTCGTGGAGGACTTCATTCACCTGGTGGGCG
ATGCTCTCAAGGCCTTCCAGAGCTCTCTGATTGTCACAGATAATCTAGTGATCAGCATTCAGCGAGAGCCCGTCTCAGCTGTGTCCAGTG
ACATCACGTTCCCCATGCGGGGCCGCCGGGGCATGAAGGACTGGGTGCGGCACTCAGAGGACCGCCTCTTCCTGCCCAAGGAGGTGCTCA
GCCTCTCCTCCCCAGGGAAGCCAGCCACATCTGGGGCAGCAGGCAGCCCTGGCAGGGGGAGGGGCCCAGGAACGGTGCCTCCTGGCCCAG
GCCACTCCCACCAGCGCCTCCTCCCAGCAGACCCTGATGAGTCCTCCTACTTTGTGATCGGTGCTGTACTCTACCGCACCCTTGGCCTCA
TCCTGCCGCCTCCCAGGCCCCCGCTGGCCGTCACATCCCGGGTGATGACAGTGACTGTGCGCCCCCCTACCCAGCCTCCAGCTGAGCCCC
TCATCACTGTGGAGCTCTCCTACATCATCAATGGGACCACGGATCCCCATTGCGCCAGCTGGGACTACTCCAGAGCAGATGCCAGCTCAG
GAGACTGGGACACTGAAAATTGCCAGACCCTGGAGACCCAGGCAGCTCACACCCGCTGCCAGTGCCAGCACCTGTCCACCTTTGCTGTAC
TAGCCCAGCCGCCCAAGGACCTGACCCTGGAGCTGGCGGGCTCCCCCTCGGTCCCCCTGGTGATCGGCTGTGCAGTGTCGTGCATGGCGC
TGCTCACCCTGCTCGCCATCTATGCCGCCTTTTGGAGGTTCATAAAATCTGAACGCTCCATCATCTTGCTGAACTTCTGCCTGTCCATCT
TGGCATCCAACATCCTGATCCTCGTGGGCCAGTCCCGGGTGCTGAGCAAGGGCGTGTGCACCATGACGGCTGCCTTCCTGCACTTCTTCT
TTCTCTCCTCCTTTTGCTGGGTGCTTACCGAGGCCTGGCAGTCCTACCTGGCTGTCATTGGGCGGATGCGCACCCGCCTCGTTCGCAAGC
GCTTCCTCTGCCTGGGCTGGGGTCTGCCTGCCCTGGTGGTGGCCGTGTCTGTTGGCTTTACCCGAACGAAAGGATACGGTACATCCAGCT
ACTGCTGGCTCTCCCTGGAGGGCGGCCTGCTCTACGCCTTTGTGGGCCCTGCAGCCGTCATTGTCCTGGTGAACATGCTCATCGGAATCA
TCGTCTTCAACAAGCTCATGGCACGTGATGGCATCTCCGACAAATCCAAGAAGCAGAGGGCCGGGGCCTCACTCTGGAGCTCCTGCGTGG
TGCTGCCCCTGCTGGCGCTCACCTGGATGTCTGCCGTCCTGGCTATGACAGACCGCCGTTCCGTCCTCTTCCAGGCCCTCTTTGCTGTCT
TCAACTCCGCGCAGGGCTTTGTCATCACTGCTGTGCACTGCTTCCTGCGCCGAGAGGTCCAGGATGTGGTGAAGTGCCAGATGGGGGTGT
GCCGGGCTGATGAGAGCGAAGACTCCCCTGACTCGTGTAAGAACGGGCAGCTGCAGATCCTGTCAGACTTTGAAAAGGATGTGGATCTGG
CTTGTCAAACAGTGCTGTTCAAGGAGGTCAACACTTGCAACCCGTCCACCATCACGGGCACACTATCCCGCCTGTCCCTGGATGAGGATG
AGGAGCCCAAGTCCTGCCTCGTGGGCCCTGAGGGCAGCCTCAGCTTCTCACCACTGCCTGGGAATATCCTGGTGCCCATGGCAGCCTCAC
CAGGGCTGGGGGAGCCTCCGCCCCCACAGGAGGCCAACCCTGTTTACATGTGTGGGGAGGGTGGCCTGCGGCAGCTGGACCTCACATGGC
TGCGGCCCACTGAGCCAGGCTCTGAGGGAGACTACATGGTGCTGCCCCGGCGGACTTTGAGCCTGCAGCCTGGCGGTGGGGGTGGAGGTG
GTGAGGATGCCCCCAGGGCCCGGCCGGAGGGGACCCCCCGGCGAGCTGCCAAGACAGTGGCCCACACTGAAGGCTACCCCAGCTTCCTGT
CCGTGGACCACTCGGGCCTGGGGCTGGGCCCTGCCTATGGATCTCTCCAGAATCCCTATGGAATGACCTTCCAACCGCCACCGCCGACAC
CCAGCGCCCGCCAAGTGCCCGAGCCAGGGGAGCGCAGCCGGACCATGCCTCGCACCGTGCCCGGCTCTACCATGAAGATGGGCTCCCTGG
AGCGAAAGAAATTACGGTATTCAGACCTGGACTTTGAGAAGGTGATGCACACCCGGAAACGGCATTCAGAACTCTACCACGAGCTCAACC
AGAAGTTCCACACTTTCGACCGCTACCGCAGCCAGTCCACGGCCAAGAGGGAGAAGCGGTGGAGTGTGTCCTCGGGTGGGGCAGCCGAGC
GGAGCGTGTGCACCGATAAGCCCAGCCCTGGGGAGCGCCCCAGCTTGTCCCAACATCGGCGCCATCAGAGCTGGAGCACCTTCAAATCTA
TGACACTGGGCTCGCTGCCCCCCAAGCCCCGAGAACGGCTGACTCTGCACCGGGCAGCAGCCTGGGAGCCCACAGAACCACCGGATGGTG
ACTTCCAGACAGAGGTGTGAGTGCCACGCTGGACTGCCCACTGCATATAAATATATATATCTCTCTATTTTCACACTCCACTTTGGAACT
ACCCAGGAGCCAGCGCCCTCTCCCCTCTCCCGAGGGCTGGGCAGGGAGGCGCCGTGGACTCAGCCAGGCTGGGGGAGCCGGACATGGCTT
GGCCTGGGGTCCCAGGGCCCTTCCTTGTTTCTCAGAGGCCCCTCAGCCACTGGAACCCCATCTTCAGCCCAGCCTGTCCGTCCCTGTCCC

>70657_70657_1_PUM1-BAI2_PUM1_chr1_31532051_ENST00000373741_BAI2_chr1_32222416_ENST00000398556_length(amino acids)=1678AA_BP=34
MCCLRVSRVHTGPGLAWQPGNLFQSRQPSPHMPLPPPGPGPEPIPGCTAPTQSPVGRHVVGVKGVGGMSVACVLKRKAVLWQDSFSPHLK
HHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTG
DNIHAEHQGKGHRMTPACPLLLSVILSLRLATAFDPAPSACSALASGVLYGAFSLQDLFPTIASGCSWTLENPDPTKYSLYLRFNRQEQV
CAHFAPRLLPLDHYLVNFTCLRPSPEEAVAQAESEVGRPEEEEAEAAAGLELCSGSGPFTFLHFDKNFVQLCLSAEPSEAPRLLAPAALA
FRFVEVLLINNNNSSQFTCGVLCRWSEECGRAAGRACGFAQPGCSCPGEAGAGSTTTTSPGPPAAHTLSNALVPGGPAPPAEADLHSGSS
NDLFTTEMRYGEEPEEEPKVKTQWPRSADEPGLYMAQTVHGVWEEWGSWSLCSRSCGRGSRSRMRTCVPPQHGGKACEGPELQTKLCSMA
ACPVEGQWLEWGPWGPCSTSCANGTQQRSRKCSVAGPAWATCTGALTDTRECSNLECPATDSKWGPWNAWSLCSKTCDTGWQRRFRMCQA
TGTQGYPCEGTGEEVKPCSEKRCPAFHEMCRDEYVMLMTWKKAAAGEIIYNKCPPNASGSASRRCLLSAQGVAYWGLPSFARCISHEYRY
LYLSLREHLAKGQRMLAGEGMSQVVRSLQELLARRTYYSGDLLFSVDILRNVTDTFKRATYVPSADDVQRFFQVVSFMVDAENKEKWDDA
QQVSPGSVHLLRVVEDFIHLVGDALKAFQSSLIVTDNLVISIQREPVSAVSSDITFPMRGRRGMKDWVRHSEDRLFLPKEVLSLSSPGKP
ATSGAAGSPGRGRGPGTVPPGPGHSHQRLLPADPDESSYFVIGAVLYRTLGLILPPPRPPLAVTSRVMTVTVRPPTQPPAEPLITVELSY
IINGTTDPHCASWDYSRADASSGDWDTENCQTLETQAAHTRCQCQHLSTFAVLAQPPKDLTLELAGSPSVPLVIGCAVSCMALLTLLAIY
AAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWG
LPALVVAVSVGFTRTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNMLIGIIVFNKLMARDGISDKSKKQRAGASLWSSCVVLPLLALT
WMSAVLAMTDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVKCQMGVCRADESEDSPDSCKNGQLQILSDFEKDVDLACQTVLFK
EVNTCNPSTITGTLSRLSLDEDEEPKSCLVGPEGSLSFSPLPGNILVPMAASPGLGEPPPPQEANPVYMCGEGGLRQLDLTWLRPTEPGS
EGDYMVLPRRTLSLQPGGGGGGGEDAPRARPEGTPRRAAKTVAHTEGYPSFLSVDHSGLGLGPAYGSLQNPYGMTFQPPPPTPSARQVPE
PGERSRTMPRTVPGSTMKMGSLERKKLRYSDLDFEKVMHTRKRHSELYHELNQKFHTFDRYRSQSTAKREKRWSVSSGGAAERSVCTDKP

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>70657_70657_2_PUM1-BAI2_PUM1_chr1_31532051_ENST00000373742_BAI2_chr1_32222416_ENST00000398556_length(transcript)=5247nt_BP=471nt
ATGCCGCTGCCACCGCCGGGGCCGGGGCCGGAGCCTATCCCAGGATGCACCGCGCCAACCCAGTCCCCAGTGGGCCGCCATGTTGTCGGA
GTGAAAGGTGTTGGTGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACAT
CACCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAG
GCTCTTGCAGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTC
TTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGAT
AACATTCATGCAGAACATCAGGGCAAGGGACATAGGATGACCCCAGCCTGTCCCCTCTTACTGTCTGTGATTCTGTCCCTGCGCCTGGCC
ACCGCCTTCGACCCCGCCCCCAGTGCCTGCTCTGCCCTGGCCTCGGGTGTGCTCTACGGGGCCTTCTCGCTGCAGGACCTCTTTCCTACC
ATCGCCTCGGGCTGCTCCTGGACCCTGGAGAACCCTGACCCCACCAAGTACTCCCTCTACCTGCGCTTCAACCGCCAGGAGCAGGTGTGC
GCACACTTTGCCCCCCGCCTGCTGCCCCTGGACCACTACCTGGTCAACTTTACCTGCCTGCGGCCTAGCCCCGAGGAGGCGGTGGCCCAG
GCGGAGTCAGAGGTGGGGCGGCCAGAAGAGGAGGAGGCAGAGGCGGCAGCGGGGTTGGAGCTGTGCAGCGGCTCAGGCCCCTTTACCTTC
CTGCACTTCGACAAGAACTTCGTGCAGCTGTGCCTGTCGGCTGAGCCCTCCGAGGCCCCGCGCCTGCTGGCGCCCGCTGCCCTAGCCTTC
CGCTTTGTCGAGGTCTTGCTCATCAACAACAACAACTCTAGCCAATTCACCTGTGGTGTGCTCTGCCGCTGGAGTGAGGAGTGTGGCCGC
GCTGCCGGCAGGGCCTGCGGCTTTGCTCAGCCAGGCTGCAGCTGCCCTGGAGAGGCGGGGGCCGGCTCCACCACCACCACATCTCCAGGC
CCTCCTGCTGCCCACACCCTGTCCAATGCCCTGGTGCCCGGGGGCCCAGCCCCACCTGCTGAGGCCGATTTGCACTCGGGGAGCAGCAAT
GATCTGTTCACAACCGAGATGAGATATGGTGAGGAGCCGGAAGAGGAACCGAAAGTGAAAACCCAGTGGCCGAGGTCTGCAGATGAGCCT
GGGCTATACATGGCGCAGACAGTGCACGGCGTGTGGGAGGAGTGGGGGTCCTGGAGCCTGTGCTCCCGCAGCTGCGGGCGGGGGTCCCGG
AGCCGGATGCGGACCTGCGTGCCCCCCCAGCACGGCGGCAAGGCCTGCGAGGGTCCTGAGCTGCAGACTAAGCTCTGCAGTATGGCTGCC
TGCCCGGTGGAAGGCCAGTGGTTAGAATGGGGTCCCTGGGGCCCATGCTCCACGTCCTGTGCCAATGGGACCCAACAGCGCAGCCGGAAG
TGCAGCGTGGCGGGCCCAGCCTGGGCCACATGCACGGGTGCCCTCACTGACACCCGGGAGTGCAGCAACCTCGAGTGCCCGGCCACTGAT
AGCAAGTGGGGGCCATGGAATGCGTGGAGCCTGTGCTCTAAGACGTGTGACACAGGCTGGCAGCGCCGCTTCCGCATGTGCCAGGCCACG
GGCACGCAGGGCTACCCCTGCGAGGGCACCGGAGAGGAGGTGAAGCCTTGTAGTGAGAAGAGGTGTCCAGCCTTCCATGAGATGTGCAGG
GATGAGTACGTGATGCTGATGACGTGGAAGAAGGCAGCTGCTGGCGAGATCATCTACAACAAGTGCCCCCCGAATGCCTCAGGGTCTGCC
AGCCGCCGCTGTCTCCTCAGTGCCCAAGGCGTGGCGTACTGGGGGCTGCCCAGCTTTGCTCGCTGCATCTCCCATGAGTACCGCTACCTG
TATCTGTCACTTAGGGAGCACCTGGCCAAGGGGCAGCGCATGCTGGCAGGCGAGGGCATGTCGCAGGTGGTGCGCAGCCTGCAGGAGCTA
CTGGCCCGGCGCACCTACTATAGTGGGGACCTGCTCTTCTCTGTGGACATTCTGAGGAATGTCACTGACACCTTTAAGAGGGCCACCTAC
GTGCCCTCGGCTGATGATGTGCAGCGCTTCTTCCAGGTGGTGAGCTTCATGGTGGATGCGGAAAACAAGGAGAAGTGGGACGATGCTCAG
CAGGTGTCCCCTGGCTCTGTGCACCTGCTCCGTGTCGTGGAGGACTTCATTCACCTGGTGGGCGATGCTCTCAAGGCCTTCCAGAGCTCT
CTGATTGTCACAGATAATCTAGTGATCAGCATTCAGCGAGAGCCCGTCTCAGCTGTGTCCAGTGACATCACGTTCCCCATGCGGGGCCGC
CGGGGCATGAAGGACTGGGTGCGGCACTCAGAGGACCGCCTCTTCCTGCCCAAGGAGGTGCTCAGCCTCTCCTCCCCAGGGAAGCCAGCC
ACATCTGGGGCAGCAGGCAGCCCTGGCAGGGGGAGGGGCCCAGGAACGGTGCCTCCTGGCCCAGGCCACTCCCACCAGCGCCTCCTCCCA
GCAGACCCTGATGAGTCCTCCTACTTTGTGATCGGTGCTGTACTCTACCGCACCCTTGGCCTCATCCTGCCGCCTCCCAGGCCCCCGCTG
GCCGTCACATCCCGGGTGATGACAGTGACTGTGCGCCCCCCTACCCAGCCTCCAGCTGAGCCCCTCATCACTGTGGAGCTCTCCTACATC
ATCAATGGGACCACGGATCCCCATTGCGCCAGCTGGGACTACTCCAGAGCAGATGCCAGCTCAGGAGACTGGGACACTGAAAATTGCCAG
ACCCTGGAGACCCAGGCAGCTCACACCCGCTGCCAGTGCCAGCACCTGTCCACCTTTGCTGTACTAGCCCAGCCGCCCAAGGACCTGACC
CTGGAGCTGGCGGGCTCCCCCTCGGTCCCCCTGGTGATCGGCTGTGCAGTGTCGTGCATGGCGCTGCTCACCCTGCTCGCCATCTATGCC
GCCTTTTGGAGGTTCATAAAATCTGAACGCTCCATCATCTTGCTGAACTTCTGCCTGTCCATCTTGGCATCCAACATCCTGATCCTCGTG
GGCCAGTCCCGGGTGCTGAGCAAGGGCGTGTGCACCATGACGGCTGCCTTCCTGCACTTCTTCTTTCTCTCCTCCTTTTGCTGGGTGCTT
ACCGAGGCCTGGCAGTCCTACCTGGCTGTCATTGGGCGGATGCGCACCCGCCTCGTTCGCAAGCGCTTCCTCTGCCTGGGCTGGGGTCTG
CCTGCCCTGGTGGTGGCCGTGTCTGTTGGCTTTACCCGAACGAAAGGATACGGTACATCCAGCTACTGCTGGCTCTCCCTGGAGGGCGGC
CTGCTCTACGCCTTTGTGGGCCCTGCAGCCGTCATTGTCCTGGTGAACATGCTCATCGGAATCATCGTCTTCAACAAGCTCATGGCACGT
GATGGCATCTCCGACAAATCCAAGAAGCAGAGGGCCGGGGCCTCACTCTGGAGCTCCTGCGTGGTGCTGCCCCTGCTGGCGCTCACCTGG
ATGTCTGCCGTCCTGGCTATGACAGACCGCCGTTCCGTCCTCTTCCAGGCCCTCTTTGCTGTCTTCAACTCCGCGCAGGGCTTTGTCATC
ACTGCTGTGCACTGCTTCCTGCGCCGAGAGGTCCAGGATGTGGTGAAGTGCCAGATGGGGGTGTGCCGGGCTGATGAGAGCGAAGACTCC
CCTGACTCGTGTAAGAACGGGCAGCTGCAGATCCTGTCAGACTTTGAAAAGGATGTGGATCTGGCTTGTCAAACAGTGCTGTTCAAGGAG
GTCAACACTTGCAACCCGTCCACCATCACGGGCACACTATCCCGCCTGTCCCTGGATGAGGATGAGGAGCCCAAGTCCTGCCTCGTGGGC
CCTGAGGGCAGCCTCAGCTTCTCACCACTGCCTGGGAATATCCTGGTGCCCATGGCAGCCTCACCAGGGCTGGGGGAGCCTCCGCCCCCA
CAGGAGGCCAACCCTGTTTACATGTGTGGGGAGGGTGGCCTGCGGCAGCTGGACCTCACATGGCTGCGGCCCACTGAGCCAGGCTCTGAG
GGAGACTACATGGTGCTGCCCCGGCGGACTTTGAGCCTGCAGCCTGGCGGTGGGGGTGGAGGTGGTGAGGATGCCCCCAGGGCCCGGCCG
GAGGGGACCCCCCGGCGAGCTGCCAAGACAGTGGCCCACACTGAAGGCTACCCCAGCTTCCTGTCCGTGGACCACTCGGGCCTGGGGCTG
GGCCCTGCCTATGGATCTCTCCAGAATCCCTATGGAATGACCTTCCAACCGCCACCGCCGACACCCAGCGCCCGCCAAGTGCCCGAGCCA
GGGGAGCGCAGCCGGACCATGCCTCGCACCGTGCCCGGCTCTACCATGAAGATGGGCTCCCTGGAGCGAAAGAAATTACGGTATTCAGAC
CTGGACTTTGAGAAGGTGATGCACACCCGGAAACGGCATTCAGAACTCTACCACGAGCTCAACCAGAAGTTCCACACTTTCGACCGCTAC
CGCAGCCAGTCCACGGCCAAGAGGGAGAAGCGGTGGAGTGTGTCCTCGGGTGGGGCAGCCGAGCGGAGCGTGTGCACCGATAAGCCCAGC
CCTGGGGAGCGCCCCAGCTTGTCCCAACATCGGCGCCATCAGAGCTGGAGCACCTTCAAATCTATGACACTGGGCTCGCTGCCCCCCAAG
CCCCGAGAACGGCTGACTCTGCACCGGGCAGCAGCCTGGGAGCCCACAGAACCACCGGATGGTGACTTCCAGACAGAGGTGTGAGTGCCA
CGCTGGACTGCCCACTGCATATAAATATATATATCTCTCTATTTTCACACTCCACTTTGGAACTACCCAGGAGCCAGCGCCCTCTCCCCT
CTCCCGAGGGCTGGGCAGGGAGGCGCCGTGGACTCAGCCAGGCTGGGGGAGCCGGACATGGCTTGGCCTGGGGTCCCAGGGCCCTTCCTT
GTTTCTCAGAGGCCCCTCAGCCACTGGAACCCCATCTTCAGCCCAGCCTGTCCGTCCCTGTCCCGGGCTGGGGAGGGGGGAGGGGAACTT

>70657_70657_2_PUM1-BAI2_PUM1_chr1_31532051_ENST00000373742_BAI2_chr1_32222416_ENST00000398556_length(amino acids)=1647AA_BP=3
MPLPPPGPGPEPIPGCTAPTQSPVGRHVVGVKGVGGMSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQ
ALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQGKGHRMTPACPLLLSVILSLRLA
TAFDPAPSACSALASGVLYGAFSLQDLFPTIASGCSWTLENPDPTKYSLYLRFNRQEQVCAHFAPRLLPLDHYLVNFTCLRPSPEEAVAQ
AESEVGRPEEEEAEAAAGLELCSGSGPFTFLHFDKNFVQLCLSAEPSEAPRLLAPAALAFRFVEVLLINNNNSSQFTCGVLCRWSEECGR
AAGRACGFAQPGCSCPGEAGAGSTTTTSPGPPAAHTLSNALVPGGPAPPAEADLHSGSSNDLFTTEMRYGEEPEEEPKVKTQWPRSADEP
GLYMAQTVHGVWEEWGSWSLCSRSCGRGSRSRMRTCVPPQHGGKACEGPELQTKLCSMAACPVEGQWLEWGPWGPCSTSCANGTQQRSRK
CSVAGPAWATCTGALTDTRECSNLECPATDSKWGPWNAWSLCSKTCDTGWQRRFRMCQATGTQGYPCEGTGEEVKPCSEKRCPAFHEMCR
DEYVMLMTWKKAAAGEIIYNKCPPNASGSASRRCLLSAQGVAYWGLPSFARCISHEYRYLYLSLREHLAKGQRMLAGEGMSQVVRSLQEL
LARRTYYSGDLLFSVDILRNVTDTFKRATYVPSADDVQRFFQVVSFMVDAENKEKWDDAQQVSPGSVHLLRVVEDFIHLVGDALKAFQSS
LIVTDNLVISIQREPVSAVSSDITFPMRGRRGMKDWVRHSEDRLFLPKEVLSLSSPGKPATSGAAGSPGRGRGPGTVPPGPGHSHQRLLP
ADPDESSYFVIGAVLYRTLGLILPPPRPPLAVTSRVMTVTVRPPTQPPAEPLITVELSYIINGTTDPHCASWDYSRADASSGDWDTENCQ
TLETQAAHTRCQCQHLSTFAVLAQPPKDLTLELAGSPSVPLVIGCAVSCMALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILV
GQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKGYGTSSYCWLSLEGG
LLYAFVGPAAVIVLVNMLIGIIVFNKLMARDGISDKSKKQRAGASLWSSCVVLPLLALTWMSAVLAMTDRRSVLFQALFAVFNSAQGFVI
TAVHCFLRREVQDVVKCQMGVCRADESEDSPDSCKNGQLQILSDFEKDVDLACQTVLFKEVNTCNPSTITGTLSRLSLDEDEEPKSCLVG
PEGSLSFSPLPGNILVPMAASPGLGEPPPPQEANPVYMCGEGGLRQLDLTWLRPTEPGSEGDYMVLPRRTLSLQPGGGGGGGEDAPRARP
EGTPRRAAKTVAHTEGYPSFLSVDHSGLGLGPAYGSLQNPYGMTFQPPPPTPSARQVPEPGERSRTMPRTVPGSTMKMGSLERKKLRYSD
LDFEKVMHTRKRHSELYHELNQKFHTFDRYRSQSTAKREKRWSVSSGGAAERSVCTDKPSPGERPSLSQHRRHQSWSTFKSMTLGSLPPK

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Fusion Gene PPI Analysis for PUM1-BAI2


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for PUM1-BAI2


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for PUM1-BAI2


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource