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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:RABGAP1L-DARS2 (FusionGDB2 ID:71549) |
Fusion Gene Summary for RABGAP1L-DARS2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: RABGAP1L-DARS2 | Fusion gene ID: 71549 | Hgene | Tgene | Gene symbol | RABGAP1L | DARS2 | Gene ID | 9910 | 55157 |
Gene name | RAB GTPase activating protein 1 like | aspartyl-tRNA synthetase 2, mitochondrial | |
Synonyms | HHL|TBC1D18 | ASPRS|LBSL|MT-ASPRS|mtAspRS | |
Cytomap | 1q25.1 | 1q25.1 | |
Type of gene | protein-coding | protein-coding | |
Description | rab GTPase-activating protein 1-likeTBC1 domain family, member 18expressed in hematopoietic cells, heart, liver (HLL) | aspartate--tRNA ligase, mitochondrialaspartate tRNA ligase 2, mitochondrialaspartyl-tRNA synthetase, mitochondrial | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | Q6PI48 | |
Ensembl transtripts involved in fusion gene | ENST00000251507, ENST00000357444, ENST00000367689, ENST00000325589, ENST00000347255, ENST00000367686, ENST00000367687, ENST00000367688, ENST00000392064, ENST00000478442, ENST00000486220, ENST00000489615, | ENST00000471476, ENST00000239457, ENST00000361951, | |
Fusion gene scores | * DoF score | 27 X 24 X 9=5832 | 6 X 6 X 8=288 |
# samples | 32 | 9 | |
** MAII score | log2(32/5832*10)=-4.18784690943957 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(9/288*10)=-1.67807190511264 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: RABGAP1L [Title/Abstract] AND DARS2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | RABGAP1L(174274265)-DARS2(173795825), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | RABGAP1L | GO:0032880 | regulation of protein localization | 16923123 |
Tgene | DARS2 | GO:0043039 | tRNA aminoacylation | 15779907|17384640 |
Tgene | DARS2 | GO:0070145 | mitochondrial asparaginyl-tRNA aminoacylation | 23275545 |
Fusion gene breakpoints across RABGAP1L (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across DARS2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | SKCM | TCGA-EE-A2ML-06A | RABGAP1L | chr1 | 174274265 | - | DARS2 | chr1 | 173795825 | + |
ChimerDB4 | SKCM | TCGA-EE-A2ML-06A | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
ChimerDB4 | STAD | TCGA-VQ-A92D | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
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Fusion Gene ORF analysis for RABGAP1L-DARS2 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-3UTR | ENST00000251507 | ENST00000471476 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
5CDS-3UTR | ENST00000357444 | ENST00000471476 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
5CDS-3UTR | ENST00000367689 | ENST00000471476 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
5CDS-5UTR | ENST00000251507 | ENST00000239457 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
5CDS-5UTR | ENST00000251507 | ENST00000239457 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
5CDS-5UTR | ENST00000357444 | ENST00000239457 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
5CDS-5UTR | ENST00000357444 | ENST00000239457 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
5CDS-5UTR | ENST00000367689 | ENST00000239457 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
5CDS-5UTR | ENST00000367689 | ENST00000239457 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
5CDS-intron | ENST00000251507 | ENST00000471476 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
5CDS-intron | ENST00000357444 | ENST00000471476 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
5CDS-intron | ENST00000367689 | ENST00000471476 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
In-frame | ENST00000251507 | ENST00000361951 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
In-frame | ENST00000251507 | ENST00000361951 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
In-frame | ENST00000357444 | ENST00000361951 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
In-frame | ENST00000357444 | ENST00000361951 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
In-frame | ENST00000367689 | ENST00000361951 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
In-frame | ENST00000367689 | ENST00000361951 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3CDS | ENST00000325589 | ENST00000361951 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-3CDS | ENST00000325589 | ENST00000361951 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3CDS | ENST00000347255 | ENST00000361951 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-3CDS | ENST00000347255 | ENST00000361951 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3CDS | ENST00000367686 | ENST00000361951 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-3CDS | ENST00000367686 | ENST00000361951 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3CDS | ENST00000367687 | ENST00000361951 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-3CDS | ENST00000367687 | ENST00000361951 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3CDS | ENST00000367688 | ENST00000361951 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-3CDS | ENST00000367688 | ENST00000361951 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3CDS | ENST00000392064 | ENST00000361951 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-3CDS | ENST00000392064 | ENST00000361951 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3CDS | ENST00000478442 | ENST00000361951 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-3CDS | ENST00000478442 | ENST00000361951 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3CDS | ENST00000486220 | ENST00000361951 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-3CDS | ENST00000486220 | ENST00000361951 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3CDS | ENST00000489615 | ENST00000361951 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-3CDS | ENST00000489615 | ENST00000361951 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3UTR | ENST00000325589 | ENST00000471476 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3UTR | ENST00000347255 | ENST00000471476 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3UTR | ENST00000367686 | ENST00000471476 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3UTR | ENST00000367687 | ENST00000471476 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3UTR | ENST00000367688 | ENST00000471476 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3UTR | ENST00000392064 | ENST00000471476 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3UTR | ENST00000478442 | ENST00000471476 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3UTR | ENST00000486220 | ENST00000471476 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-3UTR | ENST00000489615 | ENST00000471476 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-5UTR | ENST00000325589 | ENST00000239457 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-5UTR | ENST00000325589 | ENST00000239457 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-5UTR | ENST00000347255 | ENST00000239457 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-5UTR | ENST00000347255 | ENST00000239457 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-5UTR | ENST00000367686 | ENST00000239457 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-5UTR | ENST00000367686 | ENST00000239457 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-5UTR | ENST00000367687 | ENST00000239457 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-5UTR | ENST00000367687 | ENST00000239457 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-5UTR | ENST00000367688 | ENST00000239457 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-5UTR | ENST00000367688 | ENST00000239457 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-5UTR | ENST00000392064 | ENST00000239457 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-5UTR | ENST00000392064 | ENST00000239457 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-5UTR | ENST00000478442 | ENST00000239457 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-5UTR | ENST00000478442 | ENST00000239457 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-5UTR | ENST00000486220 | ENST00000239457 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-5UTR | ENST00000486220 | ENST00000239457 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-5UTR | ENST00000489615 | ENST00000239457 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-5UTR | ENST00000489615 | ENST00000239457 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + |
intron-intron | ENST00000325589 | ENST00000471476 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-intron | ENST00000347255 | ENST00000471476 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-intron | ENST00000367686 | ENST00000471476 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-intron | ENST00000367687 | ENST00000471476 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-intron | ENST00000367688 | ENST00000471476 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-intron | ENST00000392064 | ENST00000471476 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-intron | ENST00000478442 | ENST00000471476 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-intron | ENST00000486220 | ENST00000471476 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
intron-intron | ENST00000489615 | ENST00000471476 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000367689 | RABGAP1L | chr1 | 174363283 | + | ENST00000361951 | DARS2 | chr1 | 173814366 | + | 3531 | 1880 | 203 | 2689 | 828 |
ENST00000357444 | RABGAP1L | chr1 | 174363283 | + | ENST00000361951 | DARS2 | chr1 | 173814366 | + | 3531 | 1880 | 203 | 2689 | 828 |
ENST00000251507 | RABGAP1L | chr1 | 174363283 | + | ENST00000361951 | DARS2 | chr1 | 173814366 | + | 3535 | 1884 | 96 | 2693 | 865 |
ENST00000367689 | RABGAP1L | chr1 | 174274265 | + | ENST00000361951 | DARS2 | chr1 | 173795825 | + | 4287 | 1635 | 203 | 3445 | 1080 |
ENST00000357444 | RABGAP1L | chr1 | 174274265 | + | ENST00000361951 | DARS2 | chr1 | 173795825 | + | 4287 | 1635 | 203 | 3445 | 1080 |
ENST00000251507 | RABGAP1L | chr1 | 174274265 | + | ENST00000361951 | DARS2 | chr1 | 173795825 | + | 4291 | 1639 | 96 | 3449 | 1117 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000367689 | ENST00000361951 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + | 0.000514624 | 0.9994854 |
ENST00000357444 | ENST00000361951 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + | 0.000514624 | 0.9994854 |
ENST00000251507 | ENST00000361951 | RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + | 0.000188003 | 0.99981207 |
ENST00000367689 | ENST00000361951 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + | 0.000150126 | 0.9998498 |
ENST00000357444 | ENST00000361951 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + | 0.000150126 | 0.9998498 |
ENST00000251507 | ENST00000361951 | RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795825 | + | 0.000133411 | 0.9998666 |
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Fusion Genomic Features for RABGAP1L-DARS2 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + | 0.003878293 | 0.9961217 |
RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795824 | + | 1.61E-09 | 1 |
RABGAP1L | chr1 | 174363283 | + | DARS2 | chr1 | 173814366 | + | 0.003878293 | 0.9961217 |
RABGAP1L | chr1 | 174274265 | + | DARS2 | chr1 | 173795824 | + | 1.61E-09 | 1 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for RABGAP1L-DARS2 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:174274265/chr1:173795825) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | DARS2 |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000251507 | + | 11 | 21 | 126_282 | 488 | 816.0 | Domain | PID |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000357444 | + | 11 | 14 | 126_282 | 451 | 606.0 | Domain | PID |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000251507 | + | 13 | 21 | 126_282 | 570 | 816.0 | Domain | PID |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000357444 | + | 13 | 14 | 126_282 | 533 | 606.0 | Domain | PID |
Tgene | DARS2 | chr1:174274265 | chr1:173795825 | ENST00000361951 | 0 | 17 | 266_268 | 42 | 646.0 | Nucleotide binding | ATP | |
Tgene | DARS2 | chr1:174274265 | chr1:173795825 | ENST00000361951 | 0 | 17 | 584_587 | 42 | 646.0 | Nucleotide binding | ATP | |
Tgene | DARS2 | chr1:174363283 | chr1:173814366 | ENST00000361951 | 10 | 17 | 584_587 | 376 | 646.0 | Nucleotide binding | ATP | |
Tgene | DARS2 | chr1:174274265 | chr1:173795825 | ENST00000361951 | 0 | 17 | 244_247 | 42 | 646.0 | Region | Aspartate |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000367688 | + | 1 | 7 | 8_222 | 0 | 254.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000367688 | + | 1 | 7 | 8_222 | 0 | 254.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000251507 | + | 11 | 21 | 538_724 | 488 | 816.0 | Domain | Rab-GAP TBC |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000325589 | + | 1 | 11 | 126_282 | 0 | 359.0 | Domain | PID |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000325589 | + | 1 | 11 | 538_724 | 0 | 359.0 | Domain | Rab-GAP TBC |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000347255 | + | 1 | 11 | 126_282 | 0 | 379.0 | Domain | PID |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000347255 | + | 1 | 11 | 538_724 | 0 | 379.0 | Domain | Rab-GAP TBC |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000357444 | + | 11 | 14 | 538_724 | 451 | 606.0 | Domain | Rab-GAP TBC |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000367687 | + | 1 | 11 | 126_282 | 0 | 378.0 | Domain | PID |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000367687 | + | 1 | 11 | 538_724 | 0 | 378.0 | Domain | Rab-GAP TBC |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000478442 | + | 1 | 4 | 126_282 | 0 | 73.0 | Domain | PID |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000478442 | + | 1 | 4 | 538_724 | 0 | 73.0 | Domain | Rab-GAP TBC |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000486220 | + | 1 | 4 | 126_282 | 0 | 73.0 | Domain | PID |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000486220 | + | 1 | 4 | 538_724 | 0 | 73.0 | Domain | Rab-GAP TBC |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000489615 | + | 1 | 9 | 126_282 | 0 | 371.0 | Domain | PID |
Hgene | RABGAP1L | chr1:174274265 | chr1:173795825 | ENST00000489615 | + | 1 | 9 | 538_724 | 0 | 371.0 | Domain | Rab-GAP TBC |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000251507 | + | 13 | 21 | 538_724 | 570 | 816.0 | Domain | Rab-GAP TBC |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000325589 | + | 1 | 11 | 126_282 | 0 | 359.0 | Domain | PID |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000325589 | + | 1 | 11 | 538_724 | 0 | 359.0 | Domain | Rab-GAP TBC |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000347255 | + | 1 | 11 | 126_282 | 0 | 379.0 | Domain | PID |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000347255 | + | 1 | 11 | 538_724 | 0 | 379.0 | Domain | Rab-GAP TBC |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000357444 | + | 13 | 14 | 538_724 | 533 | 606.0 | Domain | Rab-GAP TBC |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000367687 | + | 1 | 11 | 126_282 | 0 | 378.0 | Domain | PID |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000367687 | + | 1 | 11 | 538_724 | 0 | 378.0 | Domain | Rab-GAP TBC |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000478442 | + | 1 | 4 | 126_282 | 0 | 73.0 | Domain | PID |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000478442 | + | 1 | 4 | 538_724 | 0 | 73.0 | Domain | Rab-GAP TBC |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000486220 | + | 1 | 4 | 126_282 | 0 | 73.0 | Domain | PID |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000486220 | + | 1 | 4 | 538_724 | 0 | 73.0 | Domain | Rab-GAP TBC |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000489615 | + | 1 | 9 | 126_282 | 0 | 371.0 | Domain | PID |
Hgene | RABGAP1L | chr1:174363283 | chr1:173814366 | ENST00000489615 | + | 1 | 9 | 538_724 | 0 | 371.0 | Domain | Rab-GAP TBC |
Tgene | DARS2 | chr1:174363283 | chr1:173814366 | ENST00000361951 | 10 | 17 | 266_268 | 376 | 646.0 | Nucleotide binding | ATP | |
Tgene | DARS2 | chr1:174363283 | chr1:173814366 | ENST00000361951 | 10 | 17 | 244_247 | 376 | 646.0 | Region | Aspartate |
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Fusion Gene Sequence for RABGAP1L-DARS2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>71549_71549_1_RABGAP1L-DARS2_RABGAP1L_chr1_174274265_ENST00000251507_DARS2_chr1_173795825_ENST00000361951_length(transcript)=4291nt_BP=1639nt CTCAGTTCCCTCCGCCCTCCTCGGGCTCCAGCGGTGGCGGAGCGAACGGGACCGGCCCGGCTTCAGAGCGCGAGGTGGAGGGTGGAACGC GGGCGCCTGAAGGAGTTGTTGTCTCGGCAGCGCCCGCGGAGACGTGAAGAGGTGGTTGTGGGAAGAGAAGTTTGCAGAACTGAAATGGAG GTCAGAGCTTCATTACAGAAGGTTAGTGGATCATCTGATTCTGTGGCTACAATGAACAGTGAAGAATTTGTTTTGGTTCCTCAGTATGCA GATGATAATTCTACAAAACATGAAGAAAAACCTCAACTGAAGATAGTTTCTAATGGTGATGAACAATTGGAAAAAGCCATGGAAGAGATT TTGAGAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGATTTCAGACCATTCGTTTGGAGATATTCCA GCCAGCCAAACAAATAAGCCATCTCTTCAGTTAATTTTGGATCCGTCTAACACAGAAATTTCTACACCCAGACCATCTTCTCCAGGTGGA CTACCTGAAGAAGATAGTGTTTTATTTAATAAACTGACCTACTTAGGATGTATGAAGGTTTCTTCCCCACGTAATGAAGTAGAGGCTTTA CGGGCAATGGCAACCATGAAATCTTCCAGTCAATACCCCTTTCCTGTTACCCTGTATGTACCAAATGTTCCAGAAGGTTCTGTGAGAATT ATAGACCAATCCAGCAATGTGGAGATAGCATCTTTTCCAATCTATAAGGTGTTATTCTGTGCACGTGGACATGACGGAACAACAGAGAGC AATTGCTTTGCATTTACAGAGAGTTCCCATGGTTCGGAAGAATTTCAGATACATGTTTTCTCCTGTGAAATTAAAGAGGCAGTAAGCAGA ATTTTGTACAGTTTCTGTACAGCATTCAAACGTTCTTCCAGACAAGTGTCTGATGTTAAAGACTCAGTTATTCCTACCCCCGACAGTGAT GTGTTTACCTTCAGTGTCTCCTTGGAGGTAAAAGAAGACGATGGAAAAGGAAACTTTAGCCCTGTGCCTAAGGATAGAGATAAATTTTAT TTCAAATTAAAGCAAGGAATAGAGAAGAAGGTTGTGATTACAGTGCAGCAACTTTCTAACAAAGAATTAGCTATTGAAAGATGTTTTGGA ATGTTATTAAGCCCAGGTCGAAACGTGAAGAACAGTGACATGCATTTACTGGATATGGAATCCATGGGAAAGAGCTATGATGGGAGAGCT TATGTCATCACTGGCATGTGGAACCCCAATGCACCAGTATTTCTGGCACTTAACGAGGAAACCCCAAAAGATAAGCAAGTATACATGACT GTGGCAGTGGATATGGTAGTCACAGAGGTGGTGGAGCCTGTTCGCTTTCTCCTGGAGACAGTAGTCCGTGTGTACCCTGCAAATGAGCGA TTTTGGTATTTCAGCAGAAAGACTTTCACAGAGACTTTCTTCATGAGATTGAAACAGTCTGAGGGAAAAGGCCATACCAATGCTGGAGAT GCAATATATGAGGTGGTGAGTCTACAGCGAGAGTCTGACAAGGAGGAACCAGTCACTCCTACTAGTGGAGGGGGTCCAATGTCACCCCAG GATGATGAAGCAGAAGAGGAATTCAGTAGCTTTGTTGTCCGGACCAACACATGTGGAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGTC ACCTTGTGTGGATGGATTCAGTACCGAAGGCAAAACACATTCTTGGTCCTAAGAGATTTCGATGGGCTTGTTCAAGTTATCATTCCCCAG GATGAGTCGGCAGCCTCTGTGAAGAAGATTTTATGTGAAGCCCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCT GCAGGACAAGAGAATCCAAAAATGCCAACAGGTGAGATTGAAATCAAAGTTAAAACAGCTGAGCTTCTGAATGCCTGCAAGAAGCTGCCC TTTGAAATTAAGAACTTCGTGAAGAAAACAGAGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGTATAAC CTGCGACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTGTAATCTGCATGGGTTTGTGGATATAGAAACCCCCACATTGTTT AAGAGGACCCCAGGGGGTGCCAAAGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGTTTTATTCTCTCCCTCAGAGTCCTCAACAGTTT AAGCAACTTCTGATGGTTGGCGGTTTAGACAGATATTTTCAGGTTGCCCGATGTTATCGAGATGAAGGTTCAAGACCAGACAGACAGCCT GAGTTTACTCAGATTGACATAGAGATGTCATTTGTAGACCAGACTGGGATCCAGAGTTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCC AATGACAAAGATCCTGTGGTTGTTCCTTTTCCTACTATGACTTTTGCTGAGGTGCTGGCCACCTATGGAACTGATAAACCTGACACTCGC TTTGGAATGAAGATTATAGATATCAGTGATGTGTTTAGAAACACAGAGATTGGATTTCTTCAAGATGCACTTAGTAAGCCCCATGGAACT GTGAAAGCCATATGTATCCCTGAAGGAGCAAAATACTTAAAAAGGAAAGACATTGAATCCATTAGAAACTTTGCAGCTGACCATTTTAAT CAGGAAATCTTACCTGTATTCCTTAACGCCAATAGAAACTGGAATTCTCCAGTTGCTAATTTCATAATGGAGTCACAAAGACTGGAATTA ATCAGACTAATGGAGACCCAAGAGGAAGATGTGGTCCTACTAACTGCTGGAGAGCACAATAAAGCATGCTCTTTGTTAGGAAAATTACGA CTGGAATGTGCTGACCTTCTAGAAACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTC TTCCTGCCCAAGGAGGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTAC ACTGAGCCCAAAAAGGCCCGTAGCCAACACTATGACTTGGTTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCA GAGCTGCAGCGTTATATCCTGGCAACCTTACTAAAGGAGGATGTGAAAATGCTCTCCCATCTGCTCCAGGCTTTAGATTATGGGGCACCC CCTCATGGAGGAATTGCCTTAGGGTTAGACAGACTGATATGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAG TCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCA ACAGACTCCAAAGCAGAAAGAGCTCATTGAATCATGCATACCATGCAGAAAGTTGAGCTTTTAGGTTTTGTCCTCTTTGCTTCCCCAAGG CTAAAGTCAGATCTAGAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAACATTCTTCACCACAACGAAGA AACAGATAAAAGATACCCAATTTTGACTTGATTTCATGCATCATTTGGATTTTTTTTGGTTAGGACTTTTTTTGAAGTTCCTTTTTACTT AGGTGTGAAAGATGGTTCTTTGTTGAAATAATATAGTGGTTTAGTGTTTTCAAATCATGTTTCTCATACCCAGATAGTAGATTATTCACT TAGGACAGAGGTAATCAAATTATGTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTGCTTCATCATC CTCATCAAGAGAATCATATAAATTAAGCTTTATAATGACATTTCAACCATCAACATAATATAGTGAGGAGTAGCATAATATTTTTTAATA ATGCAGAAAACATCACTGAAATGAGAGTCACAAATTTTTCTTCAGTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTT CCTGCTAATGTGTAAAATACATACTTGCCCTGGCTACCTCACCGGGCTGTTATTGCTGGAATCAGAGGAGATAACATATATGGAAGATAA AGTGAATAAAAGTACTTTGAAAAACTATAAAGCATTCCACAAATATGAGATGATGGTATTATCCATCCATAAATAGGTAGATATATCTCT >71549_71549_1_RABGAP1L-DARS2_RABGAP1L_chr1_174274265_ENST00000251507_DARS2_chr1_173795825_ENST00000361951_length(amino acids)=1117AA_BP=514 MKELLSRQRPRRREEVVVGREVCRTEMEVRASLQKVSGSSDSVATMNSEEFVLVPQYADDNSTKHEEKPQLKIVSNGDEQLEKAMEEILR DSEKRPSSLLVDCQSSSEISDHSFGDIPASQTNKPSLQLILDPSNTEISTPRPSSPGGLPEEDSVLFNKLTYLGCMKVSSPRNEVEALRA MATMKSSSQYPFPVTLYVPNVPEGSVRIIDQSSNVEIASFPIYKVLFCARGHDGTTESNCFAFTESSHGSEEFQIHVFSCEIKEAVSRIL YSFCTAFKRSSRQVSDVKDSVIPTPDSDVFTFSVSLEVKEDDGKGNFSPVPKDRDKFYFKLKQGIEKKVVITVQQLSNKELAIERCFGML LSPGRNVKNSDMHLLDMESMGKSYDGRAYVITGMWNPNAPVFLALNEETPKDKQVYMTVAVDMVVTEVVEPVRFLLETVVRVYPANERFW YFSRKTFTETFFMRLKQSEGKGHTNAGDAIYEVVSLQRESDKEEPVTPTSGGGPMSPQDDEAEEEFSSFVVRTNTCGELRSSHLGQEVTL CGWIQYRRQNTFLVLRDFDGLVQVIIPQDESAASVKKILCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFE IKNFVKKTEALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEFLVPSREPGKFYSLPQSPQQFKQ LLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGLLQYSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFG MKIIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWNSPVANFIMESQRLELIR LMETQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTE PKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLKEDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSF -------------------------------------------------------------- >71549_71549_2_RABGAP1L-DARS2_RABGAP1L_chr1_174274265_ENST00000357444_DARS2_chr1_173795825_ENST00000361951_length(transcript)=4287nt_BP=1635nt GGCCTGGACGAGCGCGCTTCCGACCCGCCGCCACCGCCTCCTCCCCTCCTTCTCGGCCCGCCCCCTCCCTCGCCTCTTCCTGCCAGGCGG CCCTTCTCCCCTCCCCTCTCAGTTCCCTCCGCCCTCCTCGGGCTCCAGCGGTGGCGGAGCGAACGGGACCGGCCCGGCTTCAGAGCGCGA GGTGGAGGGTGGAACGCGGGCGCCTGAAGGAGTTGTTGTCTCGGCAGCGCCCGCGGAGACGTGAAGAGGTGGTTGTGGGAAGAGAAGTTT GCAGAACTGAAATGGAGGTCAGAGCTTCATTACAGAAGATAGTTTCTAATGGTGATGAACAATTGGAAAAAGCCATGGAAGAGATTTTGA GAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGATTTCAGACCATTCGTTTGGAGATATTCCAGCCA GCCAAACAAATAAGCCATCTCTTCAGTTAATTTTGGATCCGTCTAACACAGAAATTTCTACACCCAGACCATCTTCTCCAGGTGGACTAC CTGAAGAAGATAGTGTTTTATTTAATAAACTGACCTACTTAGGATGTATGAAGGTTTCTTCCCCACGTAATGAAGTAGAGGCTTTACGGG CAATGGCAACCATGAAATCTTCCAGTCAATACCCCTTTCCTGTTACCCTGTATGTACCAAATGTTCCAGAAGGTTCTGTGAGAATTATAG ACCAATCCAGCAATGTGGAGATAGCATCTTTTCCAATCTATAAGGTGTTATTCTGTGCACGTGGACATGACGGAACAACAGAGAGCAATT GCTTTGCATTTACAGAGAGTTCCCATGGTTCGGAAGAATTTCAGATACATGTTTTCTCCTGTGAAATTAAAGAGGCAGTAAGCAGAATTT TGTACAGTTTCTGTACAGCATTCAAACGTTCTTCCAGACAAGTGTCTGATGTTAAAGACTCAGTTATTCCTACCCCCGACAGTGATGTGT TTACCTTCAGTGTCTCCTTGGAGGTAAAAGAAGACGATGGAAAAGGAAACTTTAGCCCTGTGCCTAAGGATAGAGATAAATTTTATTTCA AATTAAAGCAAGGAATAGAGAAGAAGGTTGTGATTACAGTGCAGCAACTTTCTAACAAAGAATTAGCTATTGAAAGATGTTTTGGAATGT TATTAAGCCCAGGTCGAAACGTGAAGAACAGTGACATGCATTTACTGGATATGGAATCCATGGGAAAGAGCTATGATGGGAGAGCTTATG TCATCACTGGCATGTGGAACCCCAATGCACCAGTATTTCTGGCACTTAACGAGGAAACCCCAAAAGATAAGCAAGTATACATGACTGTGG CAGTGGATATGGTAGTCACAGAGGTGGTGGAGCCTGTTCGCTTTCTCCTGGAGACAGTAGTCCGTGTGTACCCTGCAAATGAGCGATTTT GGTATTTCAGCAGAAAGACTTTCACAGAGACTTTCTTCATGAGATTGAAACAGTCTGAGGGAAAAGGCCATACCAATGCTGGAGATGCAA TATATGAGGTGGTGAGTCTACAGCGAGAGTCTGACAAGGAGGAACCAGTCACTCCTACTAGTGGAGGGGGTCCAATGTCACCCCAGGATG ATGAAGCAGAAGAGGAATTCAGTAGCTTTGTTGTCCGGACCAACACATGTGGAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGTCACCT TGTGTGGATGGATTCAGTACCGAAGGCAAAACACATTCTTGGTCCTAAGAGATTTCGATGGGCTTGTTCAAGTTATCATTCCCCAGGATG AGTCGGCAGCCTCTGTGAAGAAGATTTTATGTGAAGCCCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAG GACAAGAGAATCCAAAAATGCCAACAGGTGAGATTGAAATCAAAGTTAAAACAGCTGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTG AAATTAAGAACTTCGTGAAGAAAACAGAGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCTGC GACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTGTAATCTGCATGGGTTTGTGGATATAGAAACCCCCACATTGTTTAAGA GGACCCCAGGGGGTGCCAAAGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGTTTTATTCTCTCCCTCAGAGTCCTCAACAGTTTAAGC AACTTCTGATGGTTGGCGGTTTAGACAGATATTTTCAGGTTGCCCGATGTTATCGAGATGAAGGTTCAAGACCAGACAGACAGCCTGAGT TTACTCAGATTGACATAGAGATGTCATTTGTAGACCAGACTGGGATCCAGAGTTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCCAATG ACAAAGATCCTGTGGTTGTTCCTTTTCCTACTATGACTTTTGCTGAGGTGCTGGCCACCTATGGAACTGATAAACCTGACACTCGCTTTG GAATGAAGATTATAGATATCAGTGATGTGTTTAGAAACACAGAGATTGGATTTCTTCAAGATGCACTTAGTAAGCCCCATGGAACTGTGA AAGCCATATGTATCCCTGAAGGAGCAAAATACTTAAAAAGGAAAGACATTGAATCCATTAGAAACTTTGCAGCTGACCATTTTAATCAGG AAATCTTACCTGTATTCCTTAACGCCAATAGAAACTGGAATTCTCCAGTTGCTAATTTCATAATGGAGTCACAAAGACTGGAATTAATCA GACTAATGGAGACCCAAGAGGAAGATGTGGTCCTACTAACTGCTGGAGAGCACAATAAAGCATGCTCTTTGTTAGGAAAATTACGACTGG AATGTGCTGACCTTCTAGAAACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCTTCC TGCCCAAGGAGGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTACACTG AGCCCAAAAAGGCCCGTAGCCAACACTATGACTTGGTTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCAGAGC TGCAGCGTTATATCCTGGCAACCTTACTAAAGGAGGATGTGAAAATGCTCTCCCATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTC ATGGAGGAATTGCCTTAGGGTTAGACAGACTGATATGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCT TCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG ACTCCAAAGCAGAAAGAGCTCATTGAATCATGCATACCATGCAGAAAGTTGAGCTTTTAGGTTTTGTCCTCTTTGCTTCCCCAAGGCTAA AGTCAGATCTAGAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAACATTCTTCACCACAACGAAGAAACA GATAAAAGATACCCAATTTTGACTTGATTTCATGCATCATTTGGATTTTTTTTGGTTAGGACTTTTTTTGAAGTTCCTTTTTACTTAGGT GTGAAAGATGGTTCTTTGTTGAAATAATATAGTGGTTTAGTGTTTTCAAATCATGTTTCTCATACCCAGATAGTAGATTATTCACTTAGG ACAGAGGTAATCAAATTATGTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTGCTTCATCATCCTCA TCAAGAGAATCATATAAATTAAGCTTTATAATGACATTTCAACCATCAACATAATATAGTGAGGAGTAGCATAATATTTTTTAATAATGC AGAAAACATCACTGAAATGAGAGTCACAAATTTTTCTTCAGTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTG CTAATGTGTAAAATACATACTTGCCCTGGCTACCTCACCGGGCTGTTATTGCTGGAATCAGAGGAGATAACATATATGGAAGATAAAGTG AATAAAAGTACTTTGAAAAACTATAAAGCATTCCACAAATATGAGATGATGGTATTATCCATCCATAAATAGGTAGATATATCTCTATTT >71549_71549_2_RABGAP1L-DARS2_RABGAP1L_chr1_174274265_ENST00000357444_DARS2_chr1_173795825_ENST00000361951_length(amino acids)=1080AA_BP=477 MKELLSRQRPRRREEVVVGREVCRTEMEVRASLQKIVSNGDEQLEKAMEEILRDSEKRPSSLLVDCQSSSEISDHSFGDIPASQTNKPSL QLILDPSNTEISTPRPSSPGGLPEEDSVLFNKLTYLGCMKVSSPRNEVEALRAMATMKSSSQYPFPVTLYVPNVPEGSVRIIDQSSNVEI ASFPIYKVLFCARGHDGTTESNCFAFTESSHGSEEFQIHVFSCEIKEAVSRILYSFCTAFKRSSRQVSDVKDSVIPTPDSDVFTFSVSLE VKEDDGKGNFSPVPKDRDKFYFKLKQGIEKKVVITVQQLSNKELAIERCFGMLLSPGRNVKNSDMHLLDMESMGKSYDGRAYVITGMWNP NAPVFLALNEETPKDKQVYMTVAVDMVVTEVVEPVRFLLETVVRVYPANERFWYFSRKTFTETFFMRLKQSEGKGHTNAGDAIYEVVSLQ RESDKEEPVTPTSGGGPMSPQDDEAEEEFSSFVVRTNTCGELRSSHLGQEVTLCGWIQYRRQNTFLVLRDFDGLVQVIIPQDESAASVKK ILCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKTEALRLQYRYLDLRSFQMQYNLRLRSQMVM KMREYLCNLHGFVDIETPTLFKRTPGGAKEFLVPSREPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEM SFVDQTGIQSLIEGLLQYSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMKIIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEG AKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWNSPVANFIMESQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLECADLLET RGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILAT LLKEDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSKPTDSKAERAH -------------------------------------------------------------- >71549_71549_3_RABGAP1L-DARS2_RABGAP1L_chr1_174274265_ENST00000367689_DARS2_chr1_173795825_ENST00000361951_length(transcript)=4287nt_BP=1635nt GGCCTGGACGAGCGCGCTTCCGACCCGCCGCCACCGCCTCCTCCCCTCCTTCTCGGCCCGCCCCCTCCCTCGCCTCTTCCTGCCAGGCGG CCCTTCTCCCCTCCCCTCTCAGTTCCCTCCGCCCTCCTCGGGCTCCAGCGGTGGCGGAGCGAACGGGACCGGCCCGGCTTCAGAGCGCGA GGTGGAGGGTGGAACGCGGGCGCCTGAAGGAGTTGTTGTCTCGGCAGCGCCCGCGGAGACGTGAAGAGGTGGTTGTGGGAAGAGAAGTTT GCAGAACTGAAATGGAGGTCAGAGCTTCATTACAGAAGATAGTTTCTAATGGTGATGAACAATTGGAAAAAGCCATGGAAGAGATTTTGA GAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGATTTCAGACCATTCGTTTGGAGATATTCCAGCCA GCCAAACAAATAAGCCATCTCTTCAGTTAATTTTGGATCCGTCTAACACAGAAATTTCTACACCCAGACCATCTTCTCCAGGTGGACTAC CTGAAGAAGATAGTGTTTTATTTAATAAACTGACCTACTTAGGATGTATGAAGGTTTCTTCCCCACGTAATGAAGTAGAGGCTTTACGGG CAATGGCAACCATGAAATCTTCCAGTCAATACCCCTTTCCTGTTACCCTGTATGTACCAAATGTTCCAGAAGGTTCTGTGAGAATTATAG ACCAATCCAGCAATGTGGAGATAGCATCTTTTCCAATCTATAAGGTGTTATTCTGTGCACGTGGACATGACGGAACAACAGAGAGCAATT GCTTTGCATTTACAGAGAGTTCCCATGGTTCGGAAGAATTTCAGATACATGTTTTCTCCTGTGAAATTAAAGAGGCAGTAAGCAGAATTT TGTACAGTTTCTGTACAGCATTCAAACGTTCTTCCAGACAAGTGTCTGATGTTAAAGACTCAGTTATTCCTACCCCCGACAGTGATGTGT TTACCTTCAGTGTCTCCTTGGAGGTAAAAGAAGACGATGGAAAAGGAAACTTTAGCCCTGTGCCTAAGGATAGAGATAAATTTTATTTCA AATTAAAGCAAGGAATAGAGAAGAAGGTTGTGATTACAGTGCAGCAACTTTCTAACAAAGAATTAGCTATTGAAAGATGTTTTGGAATGT TATTAAGCCCAGGTCGAAACGTGAAGAACAGTGACATGCATTTACTGGATATGGAATCCATGGGAAAGAGCTATGATGGGAGAGCTTATG TCATCACTGGCATGTGGAACCCCAATGCACCAGTATTTCTGGCACTTAACGAGGAAACCCCAAAAGATAAGCAAGTATACATGACTGTGG CAGTGGATATGGTAGTCACAGAGGTGGTGGAGCCTGTTCGCTTTCTCCTGGAGACAGTAGTCCGTGTGTACCCTGCAAATGAGCGATTTT GGTATTTCAGCAGAAAGACTTTCACAGAGACTTTCTTCATGAGATTGAAACAGTCTGAGGGAAAAGGCCATACCAATGCTGGAGATGCAA TATATGAGGTGGTGAGTCTACAGCGAGAGTCTGACAAGGAGGAACCAGTCACTCCTACTAGTGGAGGGGGTCCAATGTCACCCCAGGATG ATGAAGCAGAAGAGGAATTCAGTAGCTTTGTTGTCCGGACCAACACATGTGGAGAGTTGCGTTCGTCTCACTTAGGCCAAGAAGTCACCT TGTGTGGATGGATTCAGTACCGAAGGCAAAACACATTCTTGGTCCTAAGAGATTTCGATGGGCTTGTTCAAGTTATCATTCCCCAGGATG AGTCGGCAGCCTCTGTGAAGAAGATTTTATGTGAAGCCCCTGTGGAATCTGTGGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAG GACAAGAGAATCCAAAAATGCCAACAGGTGAGATTGAAATCAAAGTTAAAACAGCTGAGCTTCTGAATGCCTGCAAGAAGCTGCCCTTTG AAATTAAGAACTTCGTGAAGAAAACAGAGGCTCTTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCTGC GACTGAGGTCCCAGATGGTCATGAAAATGCGGGAATATCTCTGTAATCTGCATGGGTTTGTGGATATAGAAACCCCCACATTGTTTAAGA GGACCCCAGGGGGTGCCAAAGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGTTTTATTCTCTCCCTCAGAGTCCTCAACAGTTTAAGC AACTTCTGATGGTTGGCGGTTTAGACAGATATTTTCAGGTTGCCCGATGTTATCGAGATGAAGGTTCAAGACCAGACAGACAGCCTGAGT TTACTCAGATTGACATAGAGATGTCATTTGTAGACCAGACTGGGATCCAGAGTTTAATTGAGGGTTTGCTCCAGTATTCCTGGCCCAATG ACAAAGATCCTGTGGTTGTTCCTTTTCCTACTATGACTTTTGCTGAGGTGCTGGCCACCTATGGAACTGATAAACCTGACACTCGCTTTG GAATGAAGATTATAGATATCAGTGATGTGTTTAGAAACACAGAGATTGGATTTCTTCAAGATGCACTTAGTAAGCCCCATGGAACTGTGA AAGCCATATGTATCCCTGAAGGAGCAAAATACTTAAAAAGGAAAGACATTGAATCCATTAGAAACTTTGCAGCTGACCATTTTAATCAGG AAATCTTACCTGTATTCCTTAACGCCAATAGAAACTGGAATTCTCCAGTTGCTAATTTCATAATGGAGTCACAAAGACTGGAATTAATCA GACTAATGGAGACCCAAGAGGAAGATGTGGTCCTACTAACTGCTGGAGAGCACAATAAAGCATGCTCTTTGTTAGGAAAATTACGACTGG AATGTGCTGACCTTCTAGAAACAAGAGGAGTGGTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCTTCC TGCCCAAGGAGGAAAATCCCAGAGAGCTGGAATCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTACACTG AGCCCAAAAAGGCCCGTAGCCAACACTATGACTTGGTTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCAGAGC TGCAGCGTTATATCCTGGCAACCTTACTAAAGGAGGATGTGAAAATGCTCTCCCATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTC ATGGAGGAATTGCCTTAGGGTTAGACAGACTGATATGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCT TCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAG ACTCCAAAGCAGAAAGAGCTCATTGAATCATGCATACCATGCAGAAAGTTGAGCTTTTAGGTTTTGTCCTCTTTGCTTCCCCAAGGCTAA AGTCAGATCTAGAGTTCTGCCACAGGTCTAACAATCAAGTCTTTAGATGGAAGGAATCCAGGCAACATTCTTCACCACAACGAAGAAACA GATAAAAGATACCCAATTTTGACTTGATTTCATGCATCATTTGGATTTTTTTTGGTTAGGACTTTTTTTGAAGTTCCTTTTTACTTAGGT GTGAAAGATGGTTCTTTGTTGAAATAATATAGTGGTTTAGTGTTTTCAAATCATGTTTCTCATACCCAGATAGTAGATTATTCACTTAGG ACAGAGGTAATCAAATTATGTGTGAAATGTAGGAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTGCTTCATCATCCTCA TCAAGAGAATCATATAAATTAAGCTTTATAATGACATTTCAACCATCAACATAATATAGTGAGGAGTAGCATAATATTTTTTAATAATGC AGAAAACATCACTGAAATGAGAGTCACAAATTTTTCTTCAGTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTG CTAATGTGTAAAATACATACTTGCCCTGGCTACCTCACCGGGCTGTTATTGCTGGAATCAGAGGAGATAACATATATGGAAGATAAAGTG AATAAAAGTACTTTGAAAAACTATAAAGCATTCCACAAATATGAGATGATGGTATTATCCATCCATAAATAGGTAGATATATCTCTATTT >71549_71549_3_RABGAP1L-DARS2_RABGAP1L_chr1_174274265_ENST00000367689_DARS2_chr1_173795825_ENST00000361951_length(amino acids)=1080AA_BP=477 MKELLSRQRPRRREEVVVGREVCRTEMEVRASLQKIVSNGDEQLEKAMEEILRDSEKRPSSLLVDCQSSSEISDHSFGDIPASQTNKPSL QLILDPSNTEISTPRPSSPGGLPEEDSVLFNKLTYLGCMKVSSPRNEVEALRAMATMKSSSQYPFPVTLYVPNVPEGSVRIIDQSSNVEI ASFPIYKVLFCARGHDGTTESNCFAFTESSHGSEEFQIHVFSCEIKEAVSRILYSFCTAFKRSSRQVSDVKDSVIPTPDSDVFTFSVSLE VKEDDGKGNFSPVPKDRDKFYFKLKQGIEKKVVITVQQLSNKELAIERCFGMLLSPGRNVKNSDMHLLDMESMGKSYDGRAYVITGMWNP NAPVFLALNEETPKDKQVYMTVAVDMVVTEVVEPVRFLLETVVRVYPANERFWYFSRKTFTETFFMRLKQSEGKGHTNAGDAIYEVVSLQ RESDKEEPVTPTSGGGPMSPQDDEAEEEFSSFVVRTNTCGELRSSHLGQEVTLCGWIQYRRQNTFLVLRDFDGLVQVIIPQDESAASVKK ILCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKTEALRLQYRYLDLRSFQMQYNLRLRSQMVM KMREYLCNLHGFVDIETPTLFKRTPGGAKEFLVPSREPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEM SFVDQTGIQSLIEGLLQYSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMKIIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEG AKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWNSPVANFIMESQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLECADLLET RGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILAT LLKEDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSKPTDSKAERAH -------------------------------------------------------------- >71549_71549_4_RABGAP1L-DARS2_RABGAP1L_chr1_174363283_ENST00000251507_DARS2_chr1_173814366_ENST00000361951_length(transcript)=3535nt_BP=1884nt CTCAGTTCCCTCCGCCCTCCTCGGGCTCCAGCGGTGGCGGAGCGAACGGGACCGGCCCGGCTTCAGAGCGCGAGGTGGAGGGTGGAACGC GGGCGCCTGAAGGAGTTGTTGTCTCGGCAGCGCCCGCGGAGACGTGAAGAGGTGGTTGTGGGAAGAGAAGTTTGCAGAACTGAAATGGAG GTCAGAGCTTCATTACAGAAGGTTAGTGGATCATCTGATTCTGTGGCTACAATGAACAGTGAAGAATTTGTTTTGGTTCCTCAGTATGCA GATGATAATTCTACAAAACATGAAGAAAAACCTCAACTGAAGATAGTTTCTAATGGTGATGAACAATTGGAAAAAGCCATGGAAGAGATT TTGAGAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGATTTCAGACCATTCGTTTGGAGATATTCCA GCCAGCCAAACAAATAAGCCATCTCTTCAGTTAATTTTGGATCCGTCTAACACAGAAATTTCTACACCCAGACCATCTTCTCCAGGTGGA CTACCTGAAGAAGATAGTGTTTTATTTAATAAACTGACCTACTTAGGATGTATGAAGGTTTCTTCCCCACGTAATGAAGTAGAGGCTTTA CGGGCAATGGCAACCATGAAATCTTCCAGTCAATACCCCTTTCCTGTTACCCTGTATGTACCAAATGTTCCAGAAGGTTCTGTGAGAATT ATAGACCAATCCAGCAATGTGGAGATAGCATCTTTTCCAATCTATAAGGTGTTATTCTGTGCACGTGGACATGACGGAACAACAGAGAGC AATTGCTTTGCATTTACAGAGAGTTCCCATGGTTCGGAAGAATTTCAGATACATGTTTTCTCCTGTGAAATTAAAGAGGCAGTAAGCAGA ATTTTGTACAGTTTCTGTACAGCATTCAAACGTTCTTCCAGACAAGTGTCTGATGTTAAAGACTCAGTTATTCCTACCCCCGACAGTGAT GTGTTTACCTTCAGTGTCTCCTTGGAGGTAAAAGAAGACGATGGAAAAGGAAACTTTAGCCCTGTGCCTAAGGATAGAGATAAATTTTAT TTCAAATTAAAGCAAGGAATAGAGAAGAAGGTTGTGATTACAGTGCAGCAACTTTCTAACAAAGAATTAGCTATTGAAAGATGTTTTGGA ATGTTATTAAGCCCAGGTCGAAACGTGAAGAACAGTGACATGCATTTACTGGATATGGAATCCATGGGAAAGAGCTATGATGGGAGAGCT TATGTCATCACTGGCATGTGGAACCCCAATGCACCAGTATTTCTGGCACTTAACGAGGAAACCCCAAAAGATAAGCAAGTATACATGACT GTGGCAGTGGATATGGTAGTCACAGAGGTGGTGGAGCCTGTTCGCTTTCTCCTGGAGACAGTAGTCCGTGTGTACCCTGCAAATGAGCGA TTTTGGTATTTCAGCAGAAAGACTTTCACAGAGACTTTCTTCATGAGATTGAAACAGTCTGAGGGAAAAGGCCATACCAATGCTGGAGAT GCAATATATGAGGTGGTGAGTCTACAGCGAGAGTCTGACAAGGAGGAACCAGTCACTCCTACTAGTGGAGGGGGTCCAATGTCACCCCAG GATGATGAAGCAGAAGAGGAGAGTGATAATGAACTCTCAAGTGGAACAGGTGATGTGTCTAAGGATTGTCCTGAGAAGATCCTGTATTCT TGGGGAGAGTTGCTAGGAAAATGGCACAGTAACCTTGGTGCACGACCGAAAGGGCTGTCTACTCTGGTGAAGAGTGGTGTCCCTGAAGCA TTGAGGGCAGAGGTATGGCAGTTATTGGCAGGCTGCCATGACAACCAGGCAATGCTGGATAGATACCGAATTCTTATCACAAAGAAATAC TTAAAAAGGAAAGACATTGAATCCATTAGAAACTTTGCAGCTGACCATTTTAATCAGGAAATCTTACCTGTATTCCTTAACGCCAATAGA AACTGGAATTCTCCAGTTGCTAATTTCATAATGGAGTCACAAAGACTGGAATTAATCAGACTAATGGAGACCCAAGAGGAAGATGTGGTC CTACTAACTGCTGGAGAGCACAATAAAGCATGCTCTTTGTTAGGAAAATTACGACTGGAATGTGCTGACCTTCTAGAAACAAGAGGAGTG GTGCTCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCTTCCTGCCCAAGGAGGAAAATCCCAGAGAGCTGGAA TCGGCCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTACACTGAGCCCAAAAAGGCCCGTAGCCAACACTATGAC TTGGTTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCAGAGCTGCAGCGTTATATCCTGGCAACCTTACTAAAG GAGGATGTGAAAATGCTCTCCCATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTCATGGAGGAATTGCCTTAGGGTTAGACAGACTG ATATGCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCA GATTCTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGAATCATG CATACCATGCAGAAAGTTGAGCTTTTAGGTTTTGTCCTCTTTGCTTCCCCAAGGCTAAAGTCAGATCTAGAGTTCTGCCACAGGTCTAAC AATCAAGTCTTTAGATGGAAGGAATCCAGGCAACATTCTTCACCACAACGAAGAAACAGATAAAAGATACCCAATTTTGACTTGATTTCA TGCATCATTTGGATTTTTTTTGGTTAGGACTTTTTTTGAAGTTCCTTTTTACTTAGGTGTGAAAGATGGTTCTTTGTTGAAATAATATAG TGGTTTAGTGTTTTCAAATCATGTTTCTCATACCCAGATAGTAGATTATTCACTTAGGACAGAGGTAATCAAATTATGTGTGAAATGTAG GAAAATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTGCTTCATCATCCTCATCAAGAGAATCATATAAATTAAGCTTTATAAT GACATTTCAACCATCAACATAATATAGTGAGGAGTAGCATAATATTTTTTAATAATGCAGAAAACATCACTGAAATGAGAGTCACAAATT TTTCTTCAGTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAATGTGTAAAATACATACTTGCCCTGGCTA CCTCACCGGGCTGTTATTGCTGGAATCAGAGGAGATAACATATATGGAAGATAAAGTGAATAAAAGTACTTTGAAAAACTATAAAGCATT CCACAAATATGAGATGATGGTATTATCCATCCATAAATAGGTAGATATATCTCTATTTTATAGTTTCAGATTAAACAAAACTGATATCAA >71549_71549_4_RABGAP1L-DARS2_RABGAP1L_chr1_174363283_ENST00000251507_DARS2_chr1_173814366_ENST00000361951_length(amino acids)=865AA_BP=596 MKELLSRQRPRRREEVVVGREVCRTEMEVRASLQKVSGSSDSVATMNSEEFVLVPQYADDNSTKHEEKPQLKIVSNGDEQLEKAMEEILR DSEKRPSSLLVDCQSSSEISDHSFGDIPASQTNKPSLQLILDPSNTEISTPRPSSPGGLPEEDSVLFNKLTYLGCMKVSSPRNEVEALRA MATMKSSSQYPFPVTLYVPNVPEGSVRIIDQSSNVEIASFPIYKVLFCARGHDGTTESNCFAFTESSHGSEEFQIHVFSCEIKEAVSRIL YSFCTAFKRSSRQVSDVKDSVIPTPDSDVFTFSVSLEVKEDDGKGNFSPVPKDRDKFYFKLKQGIEKKVVITVQQLSNKELAIERCFGML LSPGRNVKNSDMHLLDMESMGKSYDGRAYVITGMWNPNAPVFLALNEETPKDKQVYMTVAVDMVVTEVVEPVRFLLETVVRVYPANERFW YFSRKTFTETFFMRLKQSEGKGHTNAGDAIYEVVSLQRESDKEEPVTPTSGGGPMSPQDDEAEEESDNELSSGTGDVSKDCPEKILYSWG ELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAGCHDNQAMLDRYRILITKKYLKRKDIESIRNFAADHFNQEILPVFLNANRNW NSPVANFIMESQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESA HHPFTAPHPSDIHLLYTEPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLKEDVKMLSHLLQALDYGAPPHGGIALGLDRLIC -------------------------------------------------------------- >71549_71549_5_RABGAP1L-DARS2_RABGAP1L_chr1_174363283_ENST00000357444_DARS2_chr1_173814366_ENST00000361951_length(transcript)=3531nt_BP=1880nt GGCCTGGACGAGCGCGCTTCCGACCCGCCGCCACCGCCTCCTCCCCTCCTTCTCGGCCCGCCCCCTCCCTCGCCTCTTCCTGCCAGGCGG CCCTTCTCCCCTCCCCTCTCAGTTCCCTCCGCCCTCCTCGGGCTCCAGCGGTGGCGGAGCGAACGGGACCGGCCCGGCTTCAGAGCGCGA GGTGGAGGGTGGAACGCGGGCGCCTGAAGGAGTTGTTGTCTCGGCAGCGCCCGCGGAGACGTGAAGAGGTGGTTGTGGGAAGAGAAGTTT GCAGAACTGAAATGGAGGTCAGAGCTTCATTACAGAAGATAGTTTCTAATGGTGATGAACAATTGGAAAAAGCCATGGAAGAGATTTTGA GAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGATTTCAGACCATTCGTTTGGAGATATTCCAGCCA GCCAAACAAATAAGCCATCTCTTCAGTTAATTTTGGATCCGTCTAACACAGAAATTTCTACACCCAGACCATCTTCTCCAGGTGGACTAC CTGAAGAAGATAGTGTTTTATTTAATAAACTGACCTACTTAGGATGTATGAAGGTTTCTTCCCCACGTAATGAAGTAGAGGCTTTACGGG CAATGGCAACCATGAAATCTTCCAGTCAATACCCCTTTCCTGTTACCCTGTATGTACCAAATGTTCCAGAAGGTTCTGTGAGAATTATAG ACCAATCCAGCAATGTGGAGATAGCATCTTTTCCAATCTATAAGGTGTTATTCTGTGCACGTGGACATGACGGAACAACAGAGAGCAATT GCTTTGCATTTACAGAGAGTTCCCATGGTTCGGAAGAATTTCAGATACATGTTTTCTCCTGTGAAATTAAAGAGGCAGTAAGCAGAATTT TGTACAGTTTCTGTACAGCATTCAAACGTTCTTCCAGACAAGTGTCTGATGTTAAAGACTCAGTTATTCCTACCCCCGACAGTGATGTGT TTACCTTCAGTGTCTCCTTGGAGGTAAAAGAAGACGATGGAAAAGGAAACTTTAGCCCTGTGCCTAAGGATAGAGATAAATTTTATTTCA AATTAAAGCAAGGAATAGAGAAGAAGGTTGTGATTACAGTGCAGCAACTTTCTAACAAAGAATTAGCTATTGAAAGATGTTTTGGAATGT TATTAAGCCCAGGTCGAAACGTGAAGAACAGTGACATGCATTTACTGGATATGGAATCCATGGGAAAGAGCTATGATGGGAGAGCTTATG TCATCACTGGCATGTGGAACCCCAATGCACCAGTATTTCTGGCACTTAACGAGGAAACCCCAAAAGATAAGCAAGTATACATGACTGTGG CAGTGGATATGGTAGTCACAGAGGTGGTGGAGCCTGTTCGCTTTCTCCTGGAGACAGTAGTCCGTGTGTACCCTGCAAATGAGCGATTTT GGTATTTCAGCAGAAAGACTTTCACAGAGACTTTCTTCATGAGATTGAAACAGTCTGAGGGAAAAGGCCATACCAATGCTGGAGATGCAA TATATGAGGTGGTGAGTCTACAGCGAGAGTCTGACAAGGAGGAACCAGTCACTCCTACTAGTGGAGGGGGTCCAATGTCACCCCAGGATG ATGAAGCAGAAGAGGAGAGTGATAATGAACTCTCAAGTGGAACAGGTGATGTGTCTAAGGATTGTCCTGAGAAGATCCTGTATTCTTGGG GAGAGTTGCTAGGAAAATGGCACAGTAACCTTGGTGCACGACCGAAAGGGCTGTCTACTCTGGTGAAGAGTGGTGTCCCTGAAGCATTGA GGGCAGAGGTATGGCAGTTATTGGCAGGCTGCCATGACAACCAGGCAATGCTGGATAGATACCGAATTCTTATCACAAAGAAATACTTAA AAAGGAAAGACATTGAATCCATTAGAAACTTTGCAGCTGACCATTTTAATCAGGAAATCTTACCTGTATTCCTTAACGCCAATAGAAACT GGAATTCTCCAGTTGCTAATTTCATAATGGAGTCACAAAGACTGGAATTAATCAGACTAATGGAGACCCAAGAGGAAGATGTGGTCCTAC TAACTGCTGGAGAGCACAATAAAGCATGCTCTTTGTTAGGAAAATTACGACTGGAATGTGCTGACCTTCTAGAAACAAGAGGAGTGGTGC TCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCTTCCTGCCCAAGGAGGAAAATCCCAGAGAGCTGGAATCGG CCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTACACTGAGCCCAAAAAGGCCCGTAGCCAACACTATGACTTGG TTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCAGAGCTGCAGCGTTATATCCTGGCAACCTTACTAAAGGAGG ATGTGAAAATGCTCTCCCATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTCATGGAGGAATTGCCTTAGGGTTAGACAGACTGATAT GCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATT CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGAATCATGCATA CCATGCAGAAAGTTGAGCTTTTAGGTTTTGTCCTCTTTGCTTCCCCAAGGCTAAAGTCAGATCTAGAGTTCTGCCACAGGTCTAACAATC AAGTCTTTAGATGGAAGGAATCCAGGCAACATTCTTCACCACAACGAAGAAACAGATAAAAGATACCCAATTTTGACTTGATTTCATGCA TCATTTGGATTTTTTTTGGTTAGGACTTTTTTTGAAGTTCCTTTTTACTTAGGTGTGAAAGATGGTTCTTTGTTGAAATAATATAGTGGT TTAGTGTTTTCAAATCATGTTTCTCATACCCAGATAGTAGATTATTCACTTAGGACAGAGGTAATCAAATTATGTGTGAAATGTAGGAAA ATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTGCTTCATCATCCTCATCAAGAGAATCATATAAATTAAGCTTTATAATGACA TTTCAACCATCAACATAATATAGTGAGGAGTAGCATAATATTTTTTAATAATGCAGAAAACATCACTGAAATGAGAGTCACAAATTTTTC TTCAGTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAATGTGTAAAATACATACTTGCCCTGGCTACCTC ACCGGGCTGTTATTGCTGGAATCAGAGGAGATAACATATATGGAAGATAAAGTGAATAAAAGTACTTTGAAAAACTATAAAGCATTCCAC AAATATGAGATGATGGTATTATCCATCCATAAATAGGTAGATATATCTCTATTTTATAGTTTCAGATTAAACAAAACTGATATCAATAGT >71549_71549_5_RABGAP1L-DARS2_RABGAP1L_chr1_174363283_ENST00000357444_DARS2_chr1_173814366_ENST00000361951_length(amino acids)=828AA_BP=559 MKELLSRQRPRRREEVVVGREVCRTEMEVRASLQKIVSNGDEQLEKAMEEILRDSEKRPSSLLVDCQSSSEISDHSFGDIPASQTNKPSL QLILDPSNTEISTPRPSSPGGLPEEDSVLFNKLTYLGCMKVSSPRNEVEALRAMATMKSSSQYPFPVTLYVPNVPEGSVRIIDQSSNVEI ASFPIYKVLFCARGHDGTTESNCFAFTESSHGSEEFQIHVFSCEIKEAVSRILYSFCTAFKRSSRQVSDVKDSVIPTPDSDVFTFSVSLE VKEDDGKGNFSPVPKDRDKFYFKLKQGIEKKVVITVQQLSNKELAIERCFGMLLSPGRNVKNSDMHLLDMESMGKSYDGRAYVITGMWNP NAPVFLALNEETPKDKQVYMTVAVDMVVTEVVEPVRFLLETVVRVYPANERFWYFSRKTFTETFFMRLKQSEGKGHTNAGDAIYEVVSLQ RESDKEEPVTPTSGGGPMSPQDDEAEEESDNELSSGTGDVSKDCPEKILYSWGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLL AGCHDNQAMLDRYRILITKKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWNSPVANFIMESQRLELIRLMETQEEDVVLLTAGEHNK ACSLLGKLRLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVLNGNEIG GGSIRIHNAELQRYILATLLKEDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELK -------------------------------------------------------------- >71549_71549_6_RABGAP1L-DARS2_RABGAP1L_chr1_174363283_ENST00000367689_DARS2_chr1_173814366_ENST00000361951_length(transcript)=3531nt_BP=1880nt GGCCTGGACGAGCGCGCTTCCGACCCGCCGCCACCGCCTCCTCCCCTCCTTCTCGGCCCGCCCCCTCCCTCGCCTCTTCCTGCCAGGCGG CCCTTCTCCCCTCCCCTCTCAGTTCCCTCCGCCCTCCTCGGGCTCCAGCGGTGGCGGAGCGAACGGGACCGGCCCGGCTTCAGAGCGCGA GGTGGAGGGTGGAACGCGGGCGCCTGAAGGAGTTGTTGTCTCGGCAGCGCCCGCGGAGACGTGAAGAGGTGGTTGTGGGAAGAGAAGTTT GCAGAACTGAAATGGAGGTCAGAGCTTCATTACAGAAGATAGTTTCTAATGGTGATGAACAATTGGAAAAAGCCATGGAAGAGATTTTGA GAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGATTTCAGACCATTCGTTTGGAGATATTCCAGCCA GCCAAACAAATAAGCCATCTCTTCAGTTAATTTTGGATCCGTCTAACACAGAAATTTCTACACCCAGACCATCTTCTCCAGGTGGACTAC CTGAAGAAGATAGTGTTTTATTTAATAAACTGACCTACTTAGGATGTATGAAGGTTTCTTCCCCACGTAATGAAGTAGAGGCTTTACGGG CAATGGCAACCATGAAATCTTCCAGTCAATACCCCTTTCCTGTTACCCTGTATGTACCAAATGTTCCAGAAGGTTCTGTGAGAATTATAG ACCAATCCAGCAATGTGGAGATAGCATCTTTTCCAATCTATAAGGTGTTATTCTGTGCACGTGGACATGACGGAACAACAGAGAGCAATT GCTTTGCATTTACAGAGAGTTCCCATGGTTCGGAAGAATTTCAGATACATGTTTTCTCCTGTGAAATTAAAGAGGCAGTAAGCAGAATTT TGTACAGTTTCTGTACAGCATTCAAACGTTCTTCCAGACAAGTGTCTGATGTTAAAGACTCAGTTATTCCTACCCCCGACAGTGATGTGT TTACCTTCAGTGTCTCCTTGGAGGTAAAAGAAGACGATGGAAAAGGAAACTTTAGCCCTGTGCCTAAGGATAGAGATAAATTTTATTTCA AATTAAAGCAAGGAATAGAGAAGAAGGTTGTGATTACAGTGCAGCAACTTTCTAACAAAGAATTAGCTATTGAAAGATGTTTTGGAATGT TATTAAGCCCAGGTCGAAACGTGAAGAACAGTGACATGCATTTACTGGATATGGAATCCATGGGAAAGAGCTATGATGGGAGAGCTTATG TCATCACTGGCATGTGGAACCCCAATGCACCAGTATTTCTGGCACTTAACGAGGAAACCCCAAAAGATAAGCAAGTATACATGACTGTGG CAGTGGATATGGTAGTCACAGAGGTGGTGGAGCCTGTTCGCTTTCTCCTGGAGACAGTAGTCCGTGTGTACCCTGCAAATGAGCGATTTT GGTATTTCAGCAGAAAGACTTTCACAGAGACTTTCTTCATGAGATTGAAACAGTCTGAGGGAAAAGGCCATACCAATGCTGGAGATGCAA TATATGAGGTGGTGAGTCTACAGCGAGAGTCTGACAAGGAGGAACCAGTCACTCCTACTAGTGGAGGGGGTCCAATGTCACCCCAGGATG ATGAAGCAGAAGAGGAGAGTGATAATGAACTCTCAAGTGGAACAGGTGATGTGTCTAAGGATTGTCCTGAGAAGATCCTGTATTCTTGGG GAGAGTTGCTAGGAAAATGGCACAGTAACCTTGGTGCACGACCGAAAGGGCTGTCTACTCTGGTGAAGAGTGGTGTCCCTGAAGCATTGA GGGCAGAGGTATGGCAGTTATTGGCAGGCTGCCATGACAACCAGGCAATGCTGGATAGATACCGAATTCTTATCACAAAGAAATACTTAA AAAGGAAAGACATTGAATCCATTAGAAACTTTGCAGCTGACCATTTTAATCAGGAAATCTTACCTGTATTCCTTAACGCCAATAGAAACT GGAATTCTCCAGTTGCTAATTTCATAATGGAGTCACAAAGACTGGAATTAATCAGACTAATGGAGACCCAAGAGGAAGATGTGGTCCTAC TAACTGCTGGAGAGCACAATAAAGCATGCTCTTTGTTAGGAAAATTACGACTGGAATGTGCTGACCTTCTAGAAACAAGAGGAGTGGTGC TCCGTGACCCCACTCTGTTCTCTTTCCTTTGGGTGGTAGATTTCCCACTCTTCCTGCCCAAGGAGGAAAATCCCAGAGAGCTGGAATCGG CCCACCACCCATTTACTGCTCCCCACCCCAGTGACATACATCTCCTGTACACTGAGCCCAAAAAGGCCCGTAGCCAACACTATGACTTGG TTTTAAATGGCAATGAAATAGGAGGTGGTTCAATTCGAATTCACAATGCAGAGCTGCAGCGTTATATCCTGGCAACCTTACTAAAGGAGG ATGTGAAAATGCTCTCCCATCTGCTCCAGGCTTTAGATTATGGGGCACCCCCTCATGGAGGAATTGCCTTAGGGTTAGACAGACTGATAT GCCTTGTCACTGGATCTCCAAGCATCAGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATT CTGTCCCTCCTGAGGAACTGAAGCCCTATCATATCCGAGTCTCCAAGCCAACAGACTCCAAAGCAGAAAGAGCTCATTGAATCATGCATA CCATGCAGAAAGTTGAGCTTTTAGGTTTTGTCCTCTTTGCTTCCCCAAGGCTAAAGTCAGATCTAGAGTTCTGCCACAGGTCTAACAATC AAGTCTTTAGATGGAAGGAATCCAGGCAACATTCTTCACCACAACGAAGAAACAGATAAAAGATACCCAATTTTGACTTGATTTCATGCA TCATTTGGATTTTTTTTGGTTAGGACTTTTTTTGAAGTTCCTTTTTACTTAGGTGTGAAAGATGGTTCTTTGTTGAAATAATATAGTGGT TTAGTGTTTTCAAATCATGTTTCTCATACCCAGATAGTAGATTATTCACTTAGGACAGAGGTAATCAAATTATGTGTGAAATGTAGGAAA ATGCTTGCCCCTGTAAACTAGTGAGTTGATGGAGCATTTGCTTCATCATCCTCATCAAGAGAATCATATAAATTAAGCTTTATAATGACA TTTCAACCATCAACATAATATAGTGAGGAGTAGCATAATATTTTTTAATAATGCAGAAAACATCACTGAAATGAGAGTCACAAATTTTTC TTCAGTGTTTCAGCCTGAGTAAGTTACATAAACCTCGCTTAGCCTCCCTTCCTGCTAATGTGTAAAATACATACTTGCCCTGGCTACCTC ACCGGGCTGTTATTGCTGGAATCAGAGGAGATAACATATATGGAAGATAAAGTGAATAAAAGTACTTTGAAAAACTATAAAGCATTCCAC AAATATGAGATGATGGTATTATCCATCCATAAATAGGTAGATATATCTCTATTTTATAGTTTCAGATTAAACAAAACTGATATCAATAGT >71549_71549_6_RABGAP1L-DARS2_RABGAP1L_chr1_174363283_ENST00000367689_DARS2_chr1_173814366_ENST00000361951_length(amino acids)=828AA_BP=559 MKELLSRQRPRRREEVVVGREVCRTEMEVRASLQKIVSNGDEQLEKAMEEILRDSEKRPSSLLVDCQSSSEISDHSFGDIPASQTNKPSL QLILDPSNTEISTPRPSSPGGLPEEDSVLFNKLTYLGCMKVSSPRNEVEALRAMATMKSSSQYPFPVTLYVPNVPEGSVRIIDQSSNVEI ASFPIYKVLFCARGHDGTTESNCFAFTESSHGSEEFQIHVFSCEIKEAVSRILYSFCTAFKRSSRQVSDVKDSVIPTPDSDVFTFSVSLE VKEDDGKGNFSPVPKDRDKFYFKLKQGIEKKVVITVQQLSNKELAIERCFGMLLSPGRNVKNSDMHLLDMESMGKSYDGRAYVITGMWNP NAPVFLALNEETPKDKQVYMTVAVDMVVTEVVEPVRFLLETVVRVYPANERFWYFSRKTFTETFFMRLKQSEGKGHTNAGDAIYEVVSLQ RESDKEEPVTPTSGGGPMSPQDDEAEEESDNELSSGTGDVSKDCPEKILYSWGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLL AGCHDNQAMLDRYRILITKKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWNSPVANFIMESQRLELIRLMETQEEDVVLLTAGEHNK ACSLLGKLRLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVLNGNEIG GGSIRIHNAELQRYILATLLKEDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELK -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for RABGAP1L-DARS2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for RABGAP1L-DARS2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for RABGAP1L-DARS2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |