FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact

Center for Computational Systems Medicine
leaf

Fusion Gene Summary

leaf

Fusion Gene ORF analysis

leaf

Fusion Genomic Features

leaf

Fusion Protein Features

leaf

Fusion Gene Sequence

leaf

Fusion Gene PPI analysis

leaf

Related Drugs

leaf

Related Diseases

Fusion gene:RAI14-CYB5R3 (FusionGDB2 ID:71849)

Fusion Gene Summary for RAI14-CYB5R3

check button Fusion gene summary
Fusion gene informationFusion gene name: RAI14-CYB5R3
Fusion gene ID: 71849
HgeneTgene
Gene symbol

RAI14

CYB5R3

Gene ID

26064

1727

Gene nameretinoic acid induced 14cytochrome b5 reductase 3
SynonymsNORPEG|RAI13B5R|DIA1
Cytomap

5p13.2

22q13.2

Type of geneprotein-codingprotein-coding
Descriptionankycorbinankyrin repeat and coiled-coil structure-containing proteinnovel retinal pigment epithelial cell proteinretinoic acid-induced protein 14NADH-cytochrome b5 reductase 3NADH-cytochrome b5 reductase 3 membrane-bound formNADH-cytochrome b5 reductase 3 soluble formdiaphorase-1mutant NADH-cytochrome b5 reductase
Modification date2020031320200313
UniProtAcc.

P00387

Ensembl transtripts involved in fusion geneENST00000515799, ENST00000265109, 
ENST00000428746, ENST00000503673, 
ENST00000512629, ENST00000397449, 
ENST00000506376, ENST00000507276, 
ENST00000352397, ENST00000361740, 
ENST00000396303, ENST00000402438, 
ENST00000407332, ENST00000407623, 
Fusion gene scores* DoF score17 X 11 X 6=112214 X 14 X 8=1568
# samples 1718
** MAII scorelog2(17/1122*10)=-2.72246602447109
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(18/1568*10)=-3.12285674778553
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: RAI14 [Title/Abstract] AND CYB5R3 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointRAI14(34687060)-CYB5R3(43015951), # samples:3
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across RAI14 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across CYB5R3 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4SKCMTCGA-FS-A4F4-06ARAI14chr5

34687060

+CYB5R3chr22

43015951

-
ChimerDB4SKCMTCGA-FS-A4F4RAI14chr5

34687060

+CYB5R3chr22

43015951

-


Top

Fusion Gene ORF analysis for RAI14-CYB5R3

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5UTR-3CDSENST00000515799ENST00000352397RAI14chr5

34687060

+CYB5R3chr22

43015951

-
5UTR-3CDSENST00000515799ENST00000361740RAI14chr5

34687060

+CYB5R3chr22

43015951

-
5UTR-3CDSENST00000515799ENST00000396303RAI14chr5

34687060

+CYB5R3chr22

43015951

-
5UTR-3CDSENST00000515799ENST00000402438RAI14chr5

34687060

+CYB5R3chr22

43015951

-
5UTR-3CDSENST00000515799ENST00000407332RAI14chr5

34687060

+CYB5R3chr22

43015951

-
5UTR-3CDSENST00000515799ENST00000407623RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000265109ENST00000361740RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000265109ENST00000396303RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000265109ENST00000402438RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000265109ENST00000407623RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000428746ENST00000361740RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000428746ENST00000396303RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000428746ENST00000402438RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000428746ENST00000407623RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000503673ENST00000361740RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000503673ENST00000396303RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000503673ENST00000402438RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000503673ENST00000407623RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000512629ENST00000361740RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000512629ENST00000396303RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000512629ENST00000402438RAI14chr5

34687060

+CYB5R3chr22

43015951

-
Frame-shiftENST00000512629ENST00000407623RAI14chr5

34687060

+CYB5R3chr22

43015951

-
In-frameENST00000265109ENST00000352397RAI14chr5

34687060

+CYB5R3chr22

43015951

-
In-frameENST00000265109ENST00000407332RAI14chr5

34687060

+CYB5R3chr22

43015951

-
In-frameENST00000428746ENST00000352397RAI14chr5

34687060

+CYB5R3chr22

43015951

-
In-frameENST00000428746ENST00000407332RAI14chr5

34687060

+CYB5R3chr22

43015951

-
In-frameENST00000503673ENST00000352397RAI14chr5

34687060

+CYB5R3chr22

43015951

-
In-frameENST00000503673ENST00000407332RAI14chr5

34687060

+CYB5R3chr22

43015951

-
In-frameENST00000512629ENST00000352397RAI14chr5

34687060

+CYB5R3chr22

43015951

-
In-frameENST00000512629ENST00000407332RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000397449ENST00000352397RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000397449ENST00000361740RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000397449ENST00000396303RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000397449ENST00000402438RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000397449ENST00000407332RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000397449ENST00000407623RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000506376ENST00000352397RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000506376ENST00000361740RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000506376ENST00000396303RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000506376ENST00000402438RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000506376ENST00000407332RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000506376ENST00000407623RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000507276ENST00000352397RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000507276ENST00000361740RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000507276ENST00000396303RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000507276ENST00000402438RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000507276ENST00000407332RAI14chr5

34687060

+CYB5R3chr22

43015951

-
intron-3CDSENST00000507276ENST00000407623RAI14chr5

34687060

+CYB5R3chr22

43015951

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000265109RAI14chr534687060+ENST00000352397CYB5R3chr2243015951-1461323631978115
ENST00000265109RAI14chr534687060+ENST00000407332CYB5R3chr2243015951-1416323631978115
ENST00000512629RAI14chr534687060+ENST00000352397CYB5R3chr2243015951-1259121429776115
ENST00000512629RAI14chr534687060+ENST00000407332CYB5R3chr2243015951-1214121429776115
ENST00000428746RAI14chr534687060+ENST00000352397CYB5R3chr2243015951-1449311619966115
ENST00000428746RAI14chr534687060+ENST00000407332CYB5R3chr2243015951-1404311619966115
ENST00000503673RAI14chr534687060+ENST00000352397CYB5R3chr2243015951-15303927001047115
ENST00000503673RAI14chr534687060+ENST00000407332CYB5R3chr2243015951-14853927001047115

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000265109ENST00000352397RAI14chr534687060+CYB5R3chr2243015951-0.634873450.36512652
ENST00000265109ENST00000407332RAI14chr534687060+CYB5R3chr2243015951-0.600152730.3998473
ENST00000512629ENST00000352397RAI14chr534687060+CYB5R3chr2243015951-0.85328770.14671235
ENST00000512629ENST00000407332RAI14chr534687060+CYB5R3chr2243015951-0.81031840.18968165
ENST00000428746ENST00000352397RAI14chr534687060+CYB5R3chr2243015951-0.773217860.22678213
ENST00000428746ENST00000407332RAI14chr534687060+CYB5R3chr2243015951-0.740763660.25923637
ENST00000503673ENST00000352397RAI14chr534687060+CYB5R3chr2243015951-0.858338650.14166138
ENST00000503673ENST00000407332RAI14chr534687060+CYB5R3chr2243015951-0.85181030.14818977

Top

Fusion Genomic Features for RAI14-CYB5R3


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

Top

Fusion Protein Features for RAI14-CYB5R3


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr5:34687060/chr22:43015951)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.CYB5R3

P00387

FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Desaturation and elongation of fatty acids, cholesterol biosynthesis, drug metabolism, and, in erythrocyte, methemoglobin reduction.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneRAI14chr5:34687060chr22:43015951ENST00000265109+218349_37412981.0Coiled coilOntology_term=ECO:0000255
HgeneRAI14chr5:34687060chr22:43015951ENST00000265109+218425_94712981.0Coiled coilOntology_term=ECO:0000255
HgeneRAI14chr5:34687060chr22:43015951ENST00000428746+218349_37412981.0Coiled coilOntology_term=ECO:0000255
HgeneRAI14chr5:34687060chr22:43015951ENST00000428746+218425_94712981.0Coiled coilOntology_term=ECO:0000255
HgeneRAI14chr5:34687060chr22:43015951ENST00000503673+319349_37412981.0Coiled coilOntology_term=ECO:0000255
HgeneRAI14chr5:34687060chr22:43015951ENST00000503673+319425_94712981.0Coiled coilOntology_term=ECO:0000255
HgeneRAI14chr5:34687060chr22:43015951ENST00000506376+117349_3740973.0Coiled coilOntology_term=ECO:0000255
HgeneRAI14chr5:34687060chr22:43015951ENST00000506376+117425_9470973.0Coiled coilOntology_term=ECO:0000255
HgeneRAI14chr5:34687060chr22:43015951ENST00000512629+217349_37412952.0Coiled coilOntology_term=ECO:0000255
HgeneRAI14chr5:34687060chr22:43015951ENST00000512629+217425_94712952.0Coiled coilOntology_term=ECO:0000255
HgeneRAI14chr5:34687060chr22:43015951ENST00000515799+320349_3740984.0Coiled coilOntology_term=ECO:0000255
HgeneRAI14chr5:34687060chr22:43015951ENST00000515799+320425_9470984.0Coiled coilOntology_term=ECO:0000255
HgeneRAI14chr5:34687060chr22:43015951ENST00000265109+218270_27612981.0MotifNuclear localization signal
HgeneRAI14chr5:34687060chr22:43015951ENST00000428746+218270_27612981.0MotifNuclear localization signal
HgeneRAI14chr5:34687060chr22:43015951ENST00000503673+319270_27612981.0MotifNuclear localization signal
HgeneRAI14chr5:34687060chr22:43015951ENST00000506376+117270_2760973.0MotifNuclear localization signal
HgeneRAI14chr5:34687060chr22:43015951ENST00000512629+217270_27612952.0MotifNuclear localization signal
HgeneRAI14chr5:34687060chr22:43015951ENST00000515799+320270_2760984.0MotifNuclear localization signal
HgeneRAI14chr5:34687060chr22:43015951ENST00000265109+218118_14712981.0RepeatNote=ANK 4
HgeneRAI14chr5:34687060chr22:43015951ENST00000265109+218151_18012981.0RepeatNote=ANK 5
HgeneRAI14chr5:34687060chr22:43015951ENST00000265109+218184_21312981.0RepeatNote=ANK 6
HgeneRAI14chr5:34687060chr22:43015951ENST00000265109+21818_5112981.0RepeatNote=ANK 1
HgeneRAI14chr5:34687060chr22:43015951ENST00000265109+218217_24712981.0RepeatNote=ANK 7
HgeneRAI14chr5:34687060chr22:43015951ENST00000265109+21852_8112981.0RepeatNote=ANK 2
HgeneRAI14chr5:34687060chr22:43015951ENST00000265109+21885_11412981.0RepeatNote=ANK 3
HgeneRAI14chr5:34687060chr22:43015951ENST00000428746+218118_14712981.0RepeatNote=ANK 4
HgeneRAI14chr5:34687060chr22:43015951ENST00000428746+218151_18012981.0RepeatNote=ANK 5
HgeneRAI14chr5:34687060chr22:43015951ENST00000428746+218184_21312981.0RepeatNote=ANK 6
HgeneRAI14chr5:34687060chr22:43015951ENST00000428746+21818_5112981.0RepeatNote=ANK 1
HgeneRAI14chr5:34687060chr22:43015951ENST00000428746+218217_24712981.0RepeatNote=ANK 7
HgeneRAI14chr5:34687060chr22:43015951ENST00000428746+21852_8112981.0RepeatNote=ANK 2
HgeneRAI14chr5:34687060chr22:43015951ENST00000428746+21885_11412981.0RepeatNote=ANK 3
HgeneRAI14chr5:34687060chr22:43015951ENST00000503673+319118_14712981.0RepeatNote=ANK 4
HgeneRAI14chr5:34687060chr22:43015951ENST00000503673+319151_18012981.0RepeatNote=ANK 5
HgeneRAI14chr5:34687060chr22:43015951ENST00000503673+319184_21312981.0RepeatNote=ANK 6
HgeneRAI14chr5:34687060chr22:43015951ENST00000503673+31918_5112981.0RepeatNote=ANK 1
HgeneRAI14chr5:34687060chr22:43015951ENST00000503673+319217_24712981.0RepeatNote=ANK 7
HgeneRAI14chr5:34687060chr22:43015951ENST00000503673+31952_8112981.0RepeatNote=ANK 2
HgeneRAI14chr5:34687060chr22:43015951ENST00000503673+31985_11412981.0RepeatNote=ANK 3
HgeneRAI14chr5:34687060chr22:43015951ENST00000506376+117118_1470973.0RepeatNote=ANK 4
HgeneRAI14chr5:34687060chr22:43015951ENST00000506376+117151_1800973.0RepeatNote=ANK 5
HgeneRAI14chr5:34687060chr22:43015951ENST00000506376+117184_2130973.0RepeatNote=ANK 6
HgeneRAI14chr5:34687060chr22:43015951ENST00000506376+11718_510973.0RepeatNote=ANK 1
HgeneRAI14chr5:34687060chr22:43015951ENST00000506376+117217_2470973.0RepeatNote=ANK 7
HgeneRAI14chr5:34687060chr22:43015951ENST00000506376+11752_810973.0RepeatNote=ANK 2
HgeneRAI14chr5:34687060chr22:43015951ENST00000506376+11785_1140973.0RepeatNote=ANK 3
HgeneRAI14chr5:34687060chr22:43015951ENST00000512629+217118_14712952.0RepeatNote=ANK 4
HgeneRAI14chr5:34687060chr22:43015951ENST00000512629+217151_18012952.0RepeatNote=ANK 5
HgeneRAI14chr5:34687060chr22:43015951ENST00000512629+217184_21312952.0RepeatNote=ANK 6
HgeneRAI14chr5:34687060chr22:43015951ENST00000512629+21718_5112952.0RepeatNote=ANK 1
HgeneRAI14chr5:34687060chr22:43015951ENST00000512629+217217_24712952.0RepeatNote=ANK 7
HgeneRAI14chr5:34687060chr22:43015951ENST00000512629+21752_8112952.0RepeatNote=ANK 2
HgeneRAI14chr5:34687060chr22:43015951ENST00000512629+21785_11412952.0RepeatNote=ANK 3
HgeneRAI14chr5:34687060chr22:43015951ENST00000515799+320118_1470984.0RepeatNote=ANK 4
HgeneRAI14chr5:34687060chr22:43015951ENST00000515799+320151_1800984.0RepeatNote=ANK 5
HgeneRAI14chr5:34687060chr22:43015951ENST00000515799+320184_2130984.0RepeatNote=ANK 6
HgeneRAI14chr5:34687060chr22:43015951ENST00000515799+32018_510984.0RepeatNote=ANK 1
HgeneRAI14chr5:34687060chr22:43015951ENST00000515799+320217_2470984.0RepeatNote=ANK 7
HgeneRAI14chr5:34687060chr22:43015951ENST00000515799+32052_810984.0RepeatNote=ANK 2
HgeneRAI14chr5:34687060chr22:43015951ENST00000515799+32085_1140984.0RepeatNote=ANK 3
TgeneCYB5R3chr5:34687060chr22:43015951ENST000003523977940_152244302.0DomainFAD-binding FR-type
TgeneCYB5R3chr5:34687060chr22:43015951ENST000003617407940_152277335.0DomainFAD-binding FR-type
TgeneCYB5R3chr5:34687060chr22:43015951ENST000003963037940_152221279.0DomainFAD-binding FR-type
TgeneCYB5R3chr5:34687060chr22:43015951ENST0000040243881040_152221279.0DomainFAD-binding FR-type
TgeneCYB5R3chr5:34687060chr22:43015951ENST000004073326840_152221279.0DomainFAD-binding FR-type
TgeneCYB5R3chr5:34687060chr22:43015951ENST000004076237940_152221279.0DomainFAD-binding FR-type
TgeneCYB5R3chr5:34687060chr22:43015951ENST0000035239779132_147244302.0Nucleotide bindingFAD
TgeneCYB5R3chr5:34687060chr22:43015951ENST0000035239779171_206244302.0Nucleotide bindingFAD
TgeneCYB5R3chr5:34687060chr22:43015951ENST0000036174079132_147277335.0Nucleotide bindingFAD
TgeneCYB5R3chr5:34687060chr22:43015951ENST0000036174079171_206277335.0Nucleotide bindingFAD
TgeneCYB5R3chr5:34687060chr22:43015951ENST0000039630379132_147221279.0Nucleotide bindingFAD
TgeneCYB5R3chr5:34687060chr22:43015951ENST0000039630379171_206221279.0Nucleotide bindingFAD
TgeneCYB5R3chr5:34687060chr22:43015951ENST00000402438810132_147221279.0Nucleotide bindingFAD
TgeneCYB5R3chr5:34687060chr22:43015951ENST00000402438810171_206221279.0Nucleotide bindingFAD
TgeneCYB5R3chr5:34687060chr22:43015951ENST0000040733268132_147221279.0Nucleotide bindingFAD
TgeneCYB5R3chr5:34687060chr22:43015951ENST0000040733268171_206221279.0Nucleotide bindingFAD
TgeneCYB5R3chr5:34687060chr22:43015951ENST0000040762379132_147221279.0Nucleotide bindingFAD
TgeneCYB5R3chr5:34687060chr22:43015951ENST0000040762379171_206221279.0Nucleotide bindingFAD


Top

Fusion Gene Sequence for RAI14-CYB5R3


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>71849_71849_1_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000265109_CYB5R3_chr22_43015951_ENST00000352397_length(transcript)=1461nt_BP=323nt
ATCCAGGTCGGCGGGGGCCGGCGCCCGGCGGCCACGTGGTGGTGCTGCCGCTGCCCCCGCCCCGCCGGCCTAGCCCGGGAGCTCGGCGCC
CACTGACCCCCGCAGCGGGGGAGGAGGAGGGACTGCGGCGCAGGAAGCCGAGCAGGAAGCGAGCCCGGCGGCCGCGTTTTCCTGGGGAAG
CGGCGGGCGGGGTGGAGCAGCCAGCTGGGTCCGGGGAGCGCCGCCGCCGCCTCGATGGGGTGTTGAAAAGTCTCCTCTAGAGCTTTGGAA
GGCTGAATGCACTAAACATGAAGAGCTTGAAAGCGAAGTTCAGGAAGAGTGACCCTGGGACTACGGCCAGGGCTTCGTGAATGAGGAGAT
GATCCGGGACCACCTTCCACCCCCAGAGGAGGAGCCGCTGGTGCTGATGTGTGGCCCCCCACCCATGATCCAGTACGCCTGCCTTCCCAA
CCTGGACCACGTGGGCCACCCCACGGAGCGCTGCTTCGTCTTCTGAGGGCCGGGCACGGTCACACGGCCACCCGCCCCGCGCACCCCACG
CCCTGTTCACGCTCACCCAGTCACCTCCCCACATCGCACACTGGGGCCCCGGGTTCAGCCTGGCCTGCCCGTGCCCTGGTGAATCACCTG
GCTGAGCAGTTCCCCTGGAGCCCCTTCGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTGGCAC
TTACTGGTCCTTACCAGAGACGCCCAGCCCCATCCCTGTCCTCATGACCCCTCGTCCACCCCCCACACACACTATAAGGCTGAGGGCTGC
CAGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGGTGCCA
GGGCCCACCCCAGCCTCGCCTGTCACCCCCACTCCCGCCTCAGGGCCAGGCCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACAC
CAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCAGGGCCCTGGCCAGCCGGGAGCTTGGCTCTCCTCTGGCTAGAGTGGGAAGAGGGG
GCTGGCCATGGGGCCCTCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTGGGGGGT
TGGCAGCCCACTGCACCGCCTCAGGGTTTTGGGGTCCTGGGCTGGGGCCACCATCCCTGATGGCAGAACTCCCACAACCACATGTATTTA
TTCCTCTGTCCTAAACCGTCCCCTCCTTCCCTCACCCCCAGCACAGGGGGATTCTGAGCAGTGCCTCTTGTCTGAGGGACATATCAGTGA
CCTCGACGTTGCCTTTAGACTACAGTTGTGTTAGCCTCTTGCGTATTGGCTTTTTCAGAGTCATTTATGAGCAGAAAAAAAAAAAGTAAA

>71849_71849_1_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000265109_CYB5R3_chr22_43015951_ENST00000352397_length(amino acids)=115AA_BP=
MSSSPGAPSGAGLCPRWATAEPSEYVLPGTYWSLPETPSPIPVLMTPRPPPTHTIRLRAASSPVCPPFPAVDHSRDVSRHTWAAQSCRCQ

--------------------------------------------------------------
>71849_71849_2_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000265109_CYB5R3_chr22_43015951_ENST00000407332_length(transcript)=1416nt_BP=323nt
ATCCAGGTCGGCGGGGGCCGGCGCCCGGCGGCCACGTGGTGGTGCTGCCGCTGCCCCCGCCCCGCCGGCCTAGCCCGGGAGCTCGGCGCC
CACTGACCCCCGCAGCGGGGGAGGAGGAGGGACTGCGGCGCAGGAAGCCGAGCAGGAAGCGAGCCCGGCGGCCGCGTTTTCCTGGGGAAG
CGGCGGGCGGGGTGGAGCAGCCAGCTGGGTCCGGGGAGCGCCGCCGCCGCCTCGATGGGGTGTTGAAAAGTCTCCTCTAGAGCTTTGGAA
GGCTGAATGCACTAAACATGAAGAGCTTGAAAGCGAAGTTCAGGAAGAGTGACCCTGGGACTACGGCCAGGGCTTCGTGAATGAGGAGAT
GATCCGGGACCACCTTCCACCCCCAGAGGAGGAGCCGCTGGTGCTGATGTGTGGCCCCCCACCCATGATCCAGTACGCCTGCCTTCCCAA
CCTGGACCACGTGGGCCACCCCACGGAGCGCTGCTTCGTCTTCTGAGGGCCGGGCACGGTCACACGGCCACCCGCCCCGCGCACCCCACG
CCCTGTTCACGCTCACCCAGTCACCTCCCCACATCGCACACTGGGGCCCCGGGTTCAGCCTGGCCTGCCCGTGCCCTGGTGAATCACCTG
GCTGAGCAGTTCCCCTGGAGCCCCTTCGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTGGCAC
TTACTGGTCCTTACCAGAGACGCCCAGCCCCATCCCTGTCCTCATGACCCCTCGTCCACCCCCCACACACACTATAAGGCTGAGGGCTGC
CAGCAGCCCCGTCTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGGTGCCA
GGGCCCACCCCAGCCTCGCCTGTCACCCCCACTCCCGCCTCAGGGCCAGGCCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACAC
CAGAAAGCCCTCTTGGGGGCACTGCTCCCTACCCCAGGGCCCTGGCCAGCCGGGAGCTTGGCTCTCCTCTGGCTAGAGTGGGAAGAGGGG
GCTGGCCATGGGGCCCTCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTGGGGGGT
TGGCAGCCCACTGCACCGCCTCAGGGTTTTGGGGTCCTGGGCTGGGGCCACCATCCCTGATGGCAGAACTCCCACAACCACATGTATTTA
TTCCTCTGTCCTAAACCGTCCCCTCCTTCCCTCACCCCCAGCACAGGGGGATTCTGAGCAGTGCCTCTTGTCTGAGGGACATATCAGTGA

>71849_71849_2_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000265109_CYB5R3_chr22_43015951_ENST00000407332_length(amino acids)=115AA_BP=
MSSSPGAPSGAGLCPRWATAEPSEYVLPGTYWSLPETPSPIPVLMTPRPPPTHTIRLRAASSPVCPPFPAVDHSRDVSRHTWAAQSCRCQ

--------------------------------------------------------------
>71849_71849_3_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000428746_CYB5R3_chr22_43015951_ENST00000352397_length(transcript)=1449nt_BP=311nt
GATGGGGTGAGTGCGCGGCACGGAGTTGGGAGGCTCCCGGCGCGGGGTCCCGGGCTCGTGTCCCCGCCTTTGTGTCTGGAGCTCGGGCGC
GGGAGGCGCTGGGGACGGCGCCCGGGCGGAGCGGCTGAGCGGGCTGCAGCCGGGGTCCCGCCACCTCTCCCTGGTCCACCGCCGGCAGCC
CACTGTCTGCGGAGAGCAGATCTGGGGACAAGAGGAAGGAGAGGAAGGTGTTGAAAAGTCTCCTCTAGAGCTTTGGAAGGCTGAATGCAC
TAAACATGAAGAGCTTGAAAGCGAAGTTCAGGAAGAGTGACCCTGGGACTACGGCCAGGGCTTCGTGAATGAGGAGATGATCCGGGACCA
CCTTCCACCCCCAGAGGAGGAGCCGCTGGTGCTGATGTGTGGCCCCCCACCCATGATCCAGTACGCCTGCCTTCCCAACCTGGACCACGT
GGGCCACCCCACGGAGCGCTGCTTCGTCTTCTGAGGGCCGGGCACGGTCACACGGCCACCCGCCCCGCGCACCCCACGCCCTGTTCACGC
TCACCCAGTCACCTCCCCACATCGCACACTGGGGCCCCGGGTTCAGCCTGGCCTGCCCGTGCCCTGGTGAATCACCTGGCTGAGCAGTTC
CCCTGGAGCCCCTTCGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTGGCACTTACTGGTCCTT
ACCAGAGACGCCCAGCCCCATCCCTGTCCTCATGACCCCTCGTCCACCCCCCACACACACTATAAGGCTGAGGGCTGCCAGCAGCCCCGT
CTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGGTGCCAGGGCCCACCCCA
GCCTCGCCTGTCACCCCCACTCCCGCCTCAGGGCCAGGCCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTC
TTGGGGGCACTGCTCCCTACCCCAGGGCCCTGGCCAGCCGGGAGCTTGGCTCTCCTCTGGCTAGAGTGGGAAGAGGGGGCTGGCCATGGG
GCCCTCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTGGGGGGTTGGCAGCCCACT
GCACCGCCTCAGGGTTTTGGGGTCCTGGGCTGGGGCCACCATCCCTGATGGCAGAACTCCCACAACCACATGTATTTATTCCTCTGTCCT
AAACCGTCCCCTCCTTCCCTCACCCCCAGCACAGGGGGATTCTGAGCAGTGCCTCTTGTCTGAGGGACATATCAGTGACCTCGACGTTGC
CTTTAGACTACAGTTGTGTTAGCCTCTTGCGTATTGGCTTTTTCAGAGTCATTTATGAGCAGAAAAAAAAAAAGTAAAACTTTGCTAATA

>71849_71849_3_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000428746_CYB5R3_chr22_43015951_ENST00000352397_length(amino acids)=115AA_BP=
MSSSPGAPSGAGLCPRWATAEPSEYVLPGTYWSLPETPSPIPVLMTPRPPPTHTIRLRAASSPVCPPFPAVDHSRDVSRHTWAAQSCRCQ

--------------------------------------------------------------
>71849_71849_4_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000428746_CYB5R3_chr22_43015951_ENST00000407332_length(transcript)=1404nt_BP=311nt
GATGGGGTGAGTGCGCGGCACGGAGTTGGGAGGCTCCCGGCGCGGGGTCCCGGGCTCGTGTCCCCGCCTTTGTGTCTGGAGCTCGGGCGC
GGGAGGCGCTGGGGACGGCGCCCGGGCGGAGCGGCTGAGCGGGCTGCAGCCGGGGTCCCGCCACCTCTCCCTGGTCCACCGCCGGCAGCC
CACTGTCTGCGGAGAGCAGATCTGGGGACAAGAGGAAGGAGAGGAAGGTGTTGAAAAGTCTCCTCTAGAGCTTTGGAAGGCTGAATGCAC
TAAACATGAAGAGCTTGAAAGCGAAGTTCAGGAAGAGTGACCCTGGGACTACGGCCAGGGCTTCGTGAATGAGGAGATGATCCGGGACCA
CCTTCCACCCCCAGAGGAGGAGCCGCTGGTGCTGATGTGTGGCCCCCCACCCATGATCCAGTACGCCTGCCTTCCCAACCTGGACCACGT
GGGCCACCCCACGGAGCGCTGCTTCGTCTTCTGAGGGCCGGGCACGGTCACACGGCCACCCGCCCCGCGCACCCCACGCCCTGTTCACGC
TCACCCAGTCACCTCCCCACATCGCACACTGGGGCCCCGGGTTCAGCCTGGCCTGCCCGTGCCCTGGTGAATCACCTGGCTGAGCAGTTC
CCCTGGAGCCCCTTCGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTGGCACTTACTGGTCCTT
ACCAGAGACGCCCAGCCCCATCCCTGTCCTCATGACCCCTCGTCCACCCCCCACACACACTATAAGGCTGAGGGCTGCCAGCAGCCCCGT
CTGCCCACCATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGGTGCCAGGGCCCACCCCA
GCCTCGCCTGTCACCCCCACTCCCGCCTCAGGGCCAGGCCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTC
TTGGGGGCACTGCTCCCTACCCCAGGGCCCTGGCCAGCCGGGAGCTTGGCTCTCCTCTGGCTAGAGTGGGAAGAGGGGGCTGGCCATGGG
GCCCTCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTGGGGGGTTGGCAGCCCACT
GCACCGCCTCAGGGTTTTGGGGTCCTGGGCTGGGGCCACCATCCCTGATGGCAGAACTCCCACAACCACATGTATTTATTCCTCTGTCCT
AAACCGTCCCCTCCTTCCCTCACCCCCAGCACAGGGGGATTCTGAGCAGTGCCTCTTGTCTGAGGGACATATCAGTGACCTCGACGTTGC

>71849_71849_4_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000428746_CYB5R3_chr22_43015951_ENST00000407332_length(amino acids)=115AA_BP=
MSSSPGAPSGAGLCPRWATAEPSEYVLPGTYWSLPETPSPIPVLMTPRPPPTHTIRLRAASSPVCPPFPAVDHSRDVSRHTWAAQSCRCQ

--------------------------------------------------------------
>71849_71849_5_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000503673_CYB5R3_chr22_43015951_ENST00000352397_length(transcript)=1530nt_BP=392nt
ACTCCCGCTGAGGCTGGGAAGATTGAAAGGGGCCATGGAGAGGCTGCAGTCACAATGAGGCCTCCAGATTCATGTCATCAAAGTGCTTCA
TGATGACTGGATTTTCACACCATTTATCCAAGGGCCCTAGTCAATGGCAGCAGCAAGAATGAAAGTAGACACATTGGAAGCTAGAGAGTC
ACTGGGTGACTTTTGGAGGTAGCAACAAGCTCATGAAGAAGGCATTCAGTGGCTTGCACTCCCCACCCATCCTCTCAACTACATGCGAAG
TTTTCACATCTTGTACATTTCCAAATTTAATGAAAAAGGTGTTGAAAAGTCTCCTCTAGAGCTTTGGAAGGCTGAATGCACTAAACATGA
AGAGCTTGAAAGCGAAGTTCAGGAAGAGTGACCCTGGGACTACGGCCAGGGCTTCGTGAATGAGGAGATGATCCGGGACCACCTTCCACC
CCCAGAGGAGGAGCCGCTGGTGCTGATGTGTGGCCCCCCACCCATGATCCAGTACGCCTGCCTTCCCAACCTGGACCACGTGGGCCACCC
CACGGAGCGCTGCTTCGTCTTCTGAGGGCCGGGCACGGTCACACGGCCACCCGCCCCGCGCACCCCACGCCCTGTTCACGCTCACCCAGT
CACCTCCCCACATCGCACACTGGGGCCCCGGGTTCAGCCTGGCCTGCCCGTGCCCTGGTGAATCACCTGGCTGAGCAGTTCCCCTGGAGC
CCCTTCGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTGGCACTTACTGGTCCTTACCAGAGAC
GCCCAGCCCCATCCCTGTCCTCATGACCCCTCGTCCACCCCCCACACACACTATAAGGCTGAGGGCTGCCAGCAGCCCCGTCTGCCCACC
ATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGGTGCCAGGGCCCACCCCAGCCTCGCCT
GTCACCCCCACTCCCGCCTCAGGGCCAGGCCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCA
CTGCTCCCTACCCCAGGGCCCTGGCCAGCCGGGAGCTTGGCTCTCCTCTGGCTAGAGTGGGAAGAGGGGGCTGGCCATGGGGCCCTCCCA
GAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTGGGGGGTTGGCAGCCCACTGCACCGCCT
CAGGGTTTTGGGGTCCTGGGCTGGGGCCACCATCCCTGATGGCAGAACTCCCACAACCACATGTATTTATTCCTCTGTCCTAAACCGTCC
CCTCCTTCCCTCACCCCCAGCACAGGGGGATTCTGAGCAGTGCCTCTTGTCTGAGGGACATATCAGTGACCTCGACGTTGCCTTTAGACT
ACAGTTGTGTTAGCCTCTTGCGTATTGGCTTTTTCAGAGTCATTTATGAGCAGAAAAAAAAAAAGTAAAACTTTGCTAATATTAACCCTT

>71849_71849_5_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000503673_CYB5R3_chr22_43015951_ENST00000352397_length(amino acids)=115AA_BP=
MSSSPGAPSGAGLCPRWATAEPSEYVLPGTYWSLPETPSPIPVLMTPRPPPTHTIRLRAASSPVCPPFPAVDHSRDVSRHTWAAQSCRCQ

--------------------------------------------------------------
>71849_71849_6_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000503673_CYB5R3_chr22_43015951_ENST00000407332_length(transcript)=1485nt_BP=392nt
ACTCCCGCTGAGGCTGGGAAGATTGAAAGGGGCCATGGAGAGGCTGCAGTCACAATGAGGCCTCCAGATTCATGTCATCAAAGTGCTTCA
TGATGACTGGATTTTCACACCATTTATCCAAGGGCCCTAGTCAATGGCAGCAGCAAGAATGAAAGTAGACACATTGGAAGCTAGAGAGTC
ACTGGGTGACTTTTGGAGGTAGCAACAAGCTCATGAAGAAGGCATTCAGTGGCTTGCACTCCCCACCCATCCTCTCAACTACATGCGAAG
TTTTCACATCTTGTACATTTCCAAATTTAATGAAAAAGGTGTTGAAAAGTCTCCTCTAGAGCTTTGGAAGGCTGAATGCACTAAACATGA
AGAGCTTGAAAGCGAAGTTCAGGAAGAGTGACCCTGGGACTACGGCCAGGGCTTCGTGAATGAGGAGATGATCCGGGACCACCTTCCACC
CCCAGAGGAGGAGCCGCTGGTGCTGATGTGTGGCCCCCCACCCATGATCCAGTACGCCTGCCTTCCCAACCTGGACCACGTGGGCCACCC
CACGGAGCGCTGCTTCGTCTTCTGAGGGCCGGGCACGGTCACACGGCCACCCGCCCCGCGCACCCCACGCCCTGTTCACGCTCACCCAGT
CACCTCCCCACATCGCACACTGGGGCCCCGGGTTCAGCCTGGCCTGCCCGTGCCCTGGTGAATCACCTGGCTGAGCAGTTCCCCTGGAGC
CCCTTCGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTGGCACTTACTGGTCCTTACCAGAGAC
GCCCAGCCCCATCCCTGTCCTCATGACCCCTCGTCCACCCCCCACACACACTATAAGGCTGAGGGCTGCCAGCAGCCCCGTCTGCCCACC
ATTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGGTGCCAGGGCCCACCCCAGCCTCGCCT
GTCACCCCCACTCCCGCCTCAGGGCCAGGCCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCA
CTGCTCCCTACCCCAGGGCCCTGGCCAGCCGGGAGCTTGGCTCTCCTCTGGCTAGAGTGGGAAGAGGGGGCTGGCCATGGGGCCCTCCCA
GAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTGGGGGGTTGGCAGCCCACTGCACCGCCT
CAGGGTTTTGGGGTCCTGGGCTGGGGCCACCATCCCTGATGGCAGAACTCCCACAACCACATGTATTTATTCCTCTGTCCTAAACCGTCC
CCTCCTTCCCTCACCCCCAGCACAGGGGGATTCTGAGCAGTGCCTCTTGTCTGAGGGACATATCAGTGACCTCGACGTTGCCTTTAGACT

>71849_71849_6_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000503673_CYB5R3_chr22_43015951_ENST00000407332_length(amino acids)=115AA_BP=
MSSSPGAPSGAGLCPRWATAEPSEYVLPGTYWSLPETPSPIPVLMTPRPPPTHTIRLRAASSPVCPPFPAVDHSRDVSRHTWAAQSCRCQ

--------------------------------------------------------------
>71849_71849_7_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000512629_CYB5R3_chr22_43015951_ENST00000352397_length(transcript)=1259nt_BP=121nt
AGCTGGGTCCGGGGAGCGCCGCCGCCGCCTCGATGGGGTGTTGAAAAGTCTCCTCTAGAGCTTTGGAAGGCTGAATGCACTAAACATGAA
GAGCTTGAAAGCGAAGTTCAGGAAGAGTGACCCTGGGACTACGGCCAGGGCTTCGTGAATGAGGAGATGATCCGGGACCACCTTCCACCC
CCAGAGGAGGAGCCGCTGGTGCTGATGTGTGGCCCCCCACCCATGATCCAGTACGCCTGCCTTCCCAACCTGGACCACGTGGGCCACCCC
ACGGAGCGCTGCTTCGTCTTCTGAGGGCCGGGCACGGTCACACGGCCACCCGCCCCGCGCACCCCACGCCCTGTTCACGCTCACCCAGTC
ACCTCCCCACATCGCACACTGGGGCCCCGGGTTCAGCCTGGCCTGCCCGTGCCCTGGTGAATCACCTGGCTGAGCAGTTCCCCTGGAGCC
CCTTCGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTGGCACTTACTGGTCCTTACCAGAGACG
CCCAGCCCCATCCCTGTCCTCATGACCCCTCGTCCACCCCCCACACACACTATAAGGCTGAGGGCTGCCAGCAGCCCCGTCTGCCCACCA
TTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGGTGCCAGGGCCCACCCCAGCCTCGCCTG
TCACCCCCACTCCCGCCTCAGGGCCAGGCCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCAC
TGCTCCCTACCCCAGGGCCCTGGCCAGCCGGGAGCTTGGCTCTCCTCTGGCTAGAGTGGGAAGAGGGGGCTGGCCATGGGGCCCTCCCAG
AACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTGGGGGGTTGGCAGCCCACTGCACCGCCTC
AGGGTTTTGGGGTCCTGGGCTGGGGCCACCATCCCTGATGGCAGAACTCCCACAACCACATGTATTTATTCCTCTGTCCTAAACCGTCCC
CTCCTTCCCTCACCCCCAGCACAGGGGGATTCTGAGCAGTGCCTCTTGTCTGAGGGACATATCAGTGACCTCGACGTTGCCTTTAGACTA

>71849_71849_7_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000512629_CYB5R3_chr22_43015951_ENST00000352397_length(amino acids)=115AA_BP=
MSSSPGAPSGAGLCPRWATAEPSEYVLPGTYWSLPETPSPIPVLMTPRPPPTHTIRLRAASSPVCPPFPAVDHSRDVSRHTWAAQSCRCQ

--------------------------------------------------------------
>71849_71849_8_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000512629_CYB5R3_chr22_43015951_ENST00000407332_length(transcript)=1214nt_BP=121nt
AGCTGGGTCCGGGGAGCGCCGCCGCCGCCTCGATGGGGTGTTGAAAAGTCTCCTCTAGAGCTTTGGAAGGCTGAATGCACTAAACATGAA
GAGCTTGAAAGCGAAGTTCAGGAAGAGTGACCCTGGGACTACGGCCAGGGCTTCGTGAATGAGGAGATGATCCGGGACCACCTTCCACCC
CCAGAGGAGGAGCCGCTGGTGCTGATGTGTGGCCCCCCACCCATGATCCAGTACGCCTGCCTTCCCAACCTGGACCACGTGGGCCACCCC
ACGGAGCGCTGCTTCGTCTTCTGAGGGCCGGGCACGGTCACACGGCCACCCGCCCCGCGCACCCCACGCCCTGTTCACGCTCACCCAGTC
ACCTCCCCACATCGCACACTGGGGCCCCGGGTTCAGCCTGGCCTGCCCGTGCCCTGGTGAATCACCTGGCTGAGCAGTTCCCCTGGAGCC
CCTTCGGGAGCAGGGCTGTGTCCCAGATGGGCCACGGCTGAGCCTTCAGAGTACGTCCTGCCTGGCACTTACTGGTCCTTACCAGAGACG
CCCAGCCCCATCCCTGTCCTCATGACCCCTCGTCCACCCCCCACACACACTATAAGGCTGAGGGCTGCCAGCAGCCCCGTCTGCCCACCA
TTCCCGGCCGTGGACCATAGTCGGGATGTCAGCAGACACACATGGGCAGCCCAAAGCTGCAGGTGCCAGGGCCCACCCCAGCCTCGCCTG
TCACCCCCACTCCCGCCTCAGGGCCAGGCCCAGGCCTCACCACCTGACGCTGCATGAGACATTGACACCAGAAAGCCCTCTTGGGGGCAC
TGCTCCCTACCCCAGGGCCCTGGCCAGCCGGGAGCTTGGCTCTCCTCTGGCTAGAGTGGGAAGAGGGGGCTGGCCATGGGGCCCTCCCAG
AACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAGGCAGCCTTGGGGAACCCCGAGCTGGGGGGTTGGCAGCCCACTGCACCGCCTC
AGGGTTTTGGGGTCCTGGGCTGGGGCCACCATCCCTGATGGCAGAACTCCCACAACCACATGTATTTATTCCTCTGTCCTAAACCGTCCC
CTCCTTCCCTCACCCCCAGCACAGGGGGATTCTGAGCAGTGCCTCTTGTCTGAGGGACATATCAGTGACCTCGACGTTGCCTTTAGACTA

>71849_71849_8_RAI14-CYB5R3_RAI14_chr5_34687060_ENST00000512629_CYB5R3_chr22_43015951_ENST00000407332_length(amino acids)=115AA_BP=
MSSSPGAPSGAGLCPRWATAEPSEYVLPGTYWSLPETPSPIPVLMTPRPPPTHTIRLRAASSPVCPPFPAVDHSRDVSRHTWAAQSCRCQ

--------------------------------------------------------------

Top

Fusion Gene PPI Analysis for RAI14-CYB5R3


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

Related Drugs for RAI14-CYB5R3


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

Related Diseases for RAI14-CYB5R3


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource