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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:ASPH-MYD88 (FusionGDB2 ID:7210)

Fusion Gene Summary for ASPH-MYD88

check button Fusion gene summary
Fusion gene informationFusion gene name: ASPH-MYD88
Fusion gene ID: 7210
HgeneTgene
Gene symbol

ASPH

MYD88

Gene ID

444

4615

Gene nameaspartate beta-hydroxylaseMYD88 innate immune signal transduction adaptor
SynonymsAAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctinMYD88D
Cytomap

8q12.3

3p22.2

Type of geneprotein-codingprotein-coding
Descriptionaspartyl/asparaginyl beta-hydroxylaseA beta H-J-JASP beta-hydroxylasecardiac junctinhumbugjunctatepeptide-aspartate beta-dioxygenasemyeloid differentiation primary response protein MyD88mutant myeloid differentiation primary response 88myeloid differentiation primary response 88myeloid differentiation primary response gene (88)
Modification date2020031520200327
UniProtAcc

Q12797

Q99836

Ensembl transtripts involved in fusion geneENST00000356457, ENST00000379449, 
ENST00000379454, ENST00000389204, 
ENST00000445642, ENST00000517661, 
ENST00000517847, ENST00000517856, 
ENST00000517903, ENST00000518068, 
ENST00000522603, ENST00000522835, 
ENST00000522919, ENST00000523897, 
ENST00000541428, 
ENST00000396334, 
ENST00000417037, ENST00000424893, 
ENST00000443433, ENST00000481122, 
ENST00000495303, 
Fusion gene scores* DoF score20 X 16 X 7=22406 X 4 X 2=48
# samples 216
** MAII scorelog2(21/2240*10)=-3.41503749927884
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(6/48*10)=0.321928094887362
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: ASPH [Title/Abstract] AND MYD88 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointASPH(62509754)-MYD88(38184513), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneASPH

GO:0045862

positive regulation of proteolysis

18387192

HgeneASPH

GO:0097202

activation of cysteine-type endopeptidase activity

18387192

TgeneMYD88

GO:0070935

3'-UTR-mediated mRNA stabilization

15294994


check buttonFusion gene breakpoints across ASPH (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across MYD88 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChiTaRS5.0N/ACB049194ASPHchr8

62509754

-MYD88chr3

38184513

-


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Fusion Gene ORF analysis for ASPH-MYD88

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-intronENST00000356457ENST00000396334ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000356457ENST00000417037ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000356457ENST00000424893ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000356457ENST00000443433ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000356457ENST00000481122ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000356457ENST00000495303ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000379449ENST00000396334ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000379449ENST00000417037ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000379449ENST00000424893ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000379449ENST00000443433ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000379449ENST00000481122ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000379449ENST00000495303ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000379454ENST00000396334ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000379454ENST00000417037ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000379454ENST00000424893ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000379454ENST00000443433ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000379454ENST00000481122ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000379454ENST00000495303ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000389204ENST00000396334ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000389204ENST00000417037ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000389204ENST00000424893ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000389204ENST00000443433ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000389204ENST00000481122ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000389204ENST00000495303ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000445642ENST00000396334ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000445642ENST00000417037ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000445642ENST00000424893ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000445642ENST00000443433ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000445642ENST00000481122ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000445642ENST00000495303ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517661ENST00000396334ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517661ENST00000417037ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517661ENST00000424893ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517661ENST00000443433ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517661ENST00000481122ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517661ENST00000495303ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517847ENST00000396334ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517847ENST00000417037ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517847ENST00000424893ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517847ENST00000443433ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517847ENST00000481122ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517847ENST00000495303ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517856ENST00000396334ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517856ENST00000417037ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517856ENST00000424893ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517856ENST00000443433ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517856ENST00000481122ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517856ENST00000495303ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517903ENST00000396334ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517903ENST00000417037ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517903ENST00000424893ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517903ENST00000443433ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517903ENST00000481122ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000517903ENST00000495303ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000518068ENST00000396334ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000518068ENST00000417037ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000518068ENST00000424893ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000518068ENST00000443433ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000518068ENST00000481122ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000518068ENST00000495303ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522603ENST00000396334ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522603ENST00000417037ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522603ENST00000424893ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522603ENST00000443433ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522603ENST00000481122ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522603ENST00000495303ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522835ENST00000396334ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522835ENST00000417037ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522835ENST00000424893ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522835ENST00000443433ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522835ENST00000481122ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522835ENST00000495303ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522919ENST00000396334ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522919ENST00000417037ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522919ENST00000424893ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522919ENST00000443433ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522919ENST00000481122ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000522919ENST00000495303ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000523897ENST00000396334ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000523897ENST00000417037ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000523897ENST00000424893ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000523897ENST00000443433ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000523897ENST00000481122ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000523897ENST00000495303ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000541428ENST00000396334ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000541428ENST00000417037ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000541428ENST00000424893ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000541428ENST00000443433ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000541428ENST00000481122ASPHchr8

62509754

-MYD88chr3

38184513

-
intron-intronENST00000541428ENST00000495303ASPHchr8

62509754

-MYD88chr3

38184513

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score

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Fusion Genomic Features for ASPH-MYD88


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for ASPH-MYD88


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/:62509754/:38184513)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
ASPH

Q12797

MYD88

Q99836

FUNCTION: [Isoform 1]: specifically hydroxylates an Asp or Asn residue in certain epidermal growth factor-like (EGF) domains of a number of proteins. {ECO:0000269|PubMed:11773073}.; FUNCTION: [Isoform 8]: membrane-bound Ca(2+)-sensing protein, which is a structural component of the ER-plasma membrane junctions. Isoform 8 regulates the activity of Ca(+2) released-activated Ca(+2) (CRAC) channels in T-cells. {ECO:0000269|PubMed:22586105}.FUNCTION: Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response (PubMed:15361868, PubMed:18292575). Acts via IRAK1, IRAK2, IRF7 and TRAF6, leading to NF-kappa-B activation, cytokine secretion and the inflammatory response (PubMed:15361868, PubMed:24316379, PubMed:19506249). Increases IL-8 transcription (PubMed:9013863). Involved in IL-18-mediated signaling pathway. Activates IRF1 resulting in its rapid migration into the nucleus to mediate an efficient induction of IFN-beta, NOS2/INOS, and IL12A genes. MyD88-mediated signaling in intestinal epithelial cells is crucial for maintenance of gut homeostasis and controls the expression of the antimicrobial lectin REG3G in the small intestine (By similarity). {ECO:0000250|UniProtKB:P22366, ECO:0000269|PubMed:15361868, ECO:0000269|PubMed:18292575, ECO:0000269|PubMed:19506249, ECO:0000269|PubMed:20855887, ECO:0000269|PubMed:24316379, ECO:0000269|PubMed:9013863}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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Fusion Gene Sequence for ASPH-MYD88


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.

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Fusion Gene PPI Analysis for ASPH-MYD88


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for ASPH-MYD88


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for ASPH-MYD88


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource