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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:ATP11B-TFRC (FusionGDB2 ID:7743)

Fusion Gene Summary for ATP11B-TFRC

check button Fusion gene summary
Fusion gene informationFusion gene name: ATP11B-TFRC
Fusion gene ID: 7743
HgeneTgene
Gene symbol

ATP11B

TFRC

Gene ID

23200

7037

Gene nameATPase phospholipid transporting 11B (putative)transferrin receptor
SynonymsATPIF|ATPIRCD71|IMD46|T9|TFR|TFR1|TR|TRFR|p90
Cytomap

3q26.33

3q29

Type of geneprotein-codingprotein-coding
Descriptionprobable phospholipid-transporting ATPase IFATPase IRATPase, class VI, type 11BP4-ATPase flippase complex alpha subunit ATP11Btruncated ATPase 11B proteintransferrin receptor protein 1
Modification date2020031320200313
UniProtAcc

Q9Y2G3

.
Ensembl transtripts involved in fusion geneENST00000323116, ENST00000482794, 
ENST00000493826, 		ENST00000392396, 
ENST00000535031, ENST00000540528, 
ENST00000465288, ENST00000360110, 
ENST00000420415, 
Fusion gene scores* DoF score20 X 15 X 10=30008 X 8 X 4=256
# samples 228
** MAII scorelog2(22/3000*10)=-3.76938707185858
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(8/256*10)=-1.67807190511264
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: ATP11B [Title/Abstract] AND TFRC [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointATP11B(182587119)-TFRC(195785503), # samples:3
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneTFRC

GO:0006826

iron ion transport

7556058

TgeneTFRC

GO:0030890

positive regulation of B cell proliferation

26642240

TgeneTFRC

GO:0031623

receptor internalization

26642240

TgeneTFRC

GO:0033572

transferrin transport

26642240

TgeneTFRC

GO:0035690

cellular response to drug

16254249

TgeneTFRC

GO:0042102

positive regulation of T cell proliferation

26642240

TgeneTFRC

GO:0045830

positive regulation of isotype switching

26642240


check buttonFusion gene breakpoints across ATP11B (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across TFRC (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4HNSCTCGA-CV-6937-01AATP11Bchr3

182587119

-TFRCchr3

195785503

-
ChimerDB4HNSCTCGA-CV-6937-01AATP11Bchr3

182587119

+TFRCchr3

195785503

-
ChimerDB4HNSCTCGA-CV-6937ATP11Bchr3

182587119

+TFRCchr3

195785503

-


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Fusion Gene ORF analysis for ATP11B-TFRC

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-3UTRENST00000323116ENST00000392396ATP11Bchr3

182587119

+TFRCchr3

195785503

-
5CDS-3UTRENST00000323116ENST00000535031ATP11Bchr3

182587119

+TFRCchr3

195785503

-
5CDS-3UTRENST00000323116ENST00000540528ATP11Bchr3

182587119

+TFRCchr3

195785503

-
5CDS-5UTRENST00000323116ENST00000465288ATP11Bchr3

182587119

+TFRCchr3

195785503

-
In-frameENST00000323116ENST00000360110ATP11Bchr3

182587119

+TFRCchr3

195785503

-
In-frameENST00000323116ENST00000420415ATP11Bchr3

182587119

+TFRCchr3

195785503

-
intron-3CDSENST00000482794ENST00000360110ATP11Bchr3

182587119

+TFRCchr3

195785503

-
intron-3CDSENST00000482794ENST00000420415ATP11Bchr3

182587119

+TFRCchr3

195785503

-
intron-3CDSENST00000493826ENST00000360110ATP11Bchr3

182587119

+TFRCchr3

195785503

-
intron-3CDSENST00000493826ENST00000420415ATP11Bchr3

182587119

+TFRCchr3

195785503

-
intron-3UTRENST00000482794ENST00000392396ATP11Bchr3

182587119

+TFRCchr3

195785503

-
intron-3UTRENST00000482794ENST00000535031ATP11Bchr3

182587119

+TFRCchr3

195785503

-
intron-3UTRENST00000482794ENST00000540528ATP11Bchr3

182587119

+TFRCchr3

195785503

-
intron-3UTRENST00000493826ENST00000392396ATP11Bchr3

182587119

+TFRCchr3

195785503

-
intron-3UTRENST00000493826ENST00000535031ATP11Bchr3

182587119

+TFRCchr3

195785503

-
intron-3UTRENST00000493826ENST00000540528ATP11Bchr3

182587119

+TFRCchr3

195785503

-
intron-5UTRENST00000482794ENST00000465288ATP11Bchr3

182587119

+TFRCchr3

195785503

-
intron-5UTRENST00000493826ENST00000465288ATP11Bchr3

182587119

+TFRCchr3

195785503

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000323116ATP11Bchr3182587119+ENST00000420415TFRCchr3195785503-553121262062872888
ENST00000323116ATP11Bchr3182587119+ENST00000360110TFRCchr3195785503-553121262062872888

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000323116ENST00000420415ATP11Bchr3182587119+TFRCchr3195785503-0.000166170.9998338
ENST00000323116ENST00000360110ATP11Bchr3182587119+TFRCchr3195785503-0.000166170.9998338

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Fusion Genomic Features for ATP11B-TFRC


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for ATP11B-TFRC


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr3:182587119/chr3:195785503)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
ATP11B

Q9Y2G3

.
FUNCTION: Catalytic component of a P4-ATPase flippase complex which catalyzes the hydrolysis of ATP coupled to the transport of aminophospholipids, phosphatidylserines (PS) and phosphatidylethanolamines (PE), from the outer to the inner leaflet of intracellular membranes (PubMed:30018401). May contribute to the maintenance of membrane lipid asymmetry in endosome compartment (PubMed:30018401). {ECO:0000269|PubMed:30018401}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+1730105_2896221178.0Topological domainCytoplasmic
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+17301_556221178.0Topological domainCytoplasmic
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+1730312_3416221178.0Topological domainExtracellular
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+173078_826221178.0Topological domainExtracellular
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+1730290_3116221178.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+1730342_3596221178.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+173056_776221178.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+173083_1046221178.0TransmembraneHelical
TgeneTFRCchr3:182587119chr3:195785503ENST000003601101319646_648512761.0MotifNote=Cell attachment site%3B required for binding to transferrin
TgeneTFRCchr3:182587119chr3:195785503ENST000003923961319646_648512761.0MotifNote=Cell attachment site%3B required for binding to transferrin
TgeneTFRCchr3:182587119chr3:195785503ENST000003601101319569_760512761.0RegionNote=Ligand-binding
TgeneTFRCchr3:182587119chr3:195785503ENST000003923961319569_760512761.0RegionNote=Ligand-binding

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+17301021_10256221178.0Topological domainCytoplasmic
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+17301048_10656221178.0Topological domainExtracellular
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+17301091_11776221178.0Topological domainCytoplasmic
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+1730360_8766221178.0Topological domainCytoplasmic
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+1730899_9106221178.0Topological domainExtracellular
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+1730931_9606221178.0Topological domainCytoplasmic
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+1730983_9976221178.0Topological domainExtracellular
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+161021_10250196.0Topological domainCytoplasmic
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+161048_10650196.0Topological domainExtracellular
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+16105_2890196.0Topological domainCytoplasmic
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+161091_11770196.0Topological domainCytoplasmic
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+161_550196.0Topological domainCytoplasmic
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+16312_3410196.0Topological domainExtracellular
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+16360_8760196.0Topological domainCytoplasmic
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+1678_820196.0Topological domainExtracellular
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+16899_9100196.0Topological domainExtracellular
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+16931_9600196.0Topological domainCytoplasmic
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+16983_9970196.0Topological domainExtracellular
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+17301026_10476221178.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+17301066_10906221178.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+1730877_8986221178.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+1730911_9306221178.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+1730961_9826221178.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000323116+1730998_10206221178.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+161026_10470196.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+161066_10900196.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+16290_3110196.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+16342_3590196.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+1656_770196.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+1683_1040196.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+16877_8980196.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+16911_9300196.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+16961_9820196.0TransmembraneHelical
HgeneATP11Bchr3:182587119chr3:195785503ENST00000493826+16998_10200196.0TransmembraneHelical
TgeneTFRCchr3:182587119chr3:195785503ENST000003601101319223_313512761.0DomainNote=PA
TgeneTFRCchr3:182587119chr3:195785503ENST000003923961319223_313512761.0DomainNote=PA
TgeneTFRCchr3:182587119chr3:195785503ENST00000360110131958_61512761.0MotifStop-transfer sequence
TgeneTFRCchr3:182587119chr3:195785503ENST00000392396131958_61512761.0MotifStop-transfer sequence
TgeneTFRCchr3:182587119chr3:195785503ENST00000360110131989_760512761.0Topological domainExtracellular
TgeneTFRCchr3:182587119chr3:195785503ENST00000392396131989_760512761.0Topological domainExtracellular
TgeneTFRCchr3:182587119chr3:195785503ENST00000360110131968_88512761.0TransmembraneHelical%3B Signal-anchor for type II membrane protein
TgeneTFRCchr3:182587119chr3:195785503ENST00000392396131968_88512761.0TransmembraneHelical%3B Signal-anchor for type II membrane protein


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Fusion Gene Sequence for ATP11B-TFRC


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>7743_7743_1_ATP11B-TFRC_ATP11B_chr3_182587119_ENST00000323116_TFRC_chr3_195785503_ENST00000360110_length(transcript)=5531nt_BP=2126nt
GGTCAATAATGAAGGTGGCTGCGGCGCGGCGGCAGGCTCAGCTGCGCCGGGCGGGGGCGGCGCCGGGGCCGCGCCTGTAGGACTCGGGGC
CGACGCCGCGGGATGGGGACGCGGCGCGGGGAGTGAGGCAGTGGCGGCGGCGGCGGTAAGCGGAACTTCGGCCCGAGGGGCTCGCCCGCT
CCCGCCTCTGTCTTGTCGGCCTCCACCTGCAGCCCCGCGGCCCCCGCGCCCCGCGGGACCCGGACGGCGACGACGGGGGAATGTGGCGCT
GGATCCGGCAGCAGCTGGGTTTTGACCCACCACATCAGAGTGACACAAGAACCATCTACGTAGCCAACAGGTTTCCTCAGAATGGCCTTT
ACACACCTCAGAAATTTATAGATAACAGGATCATTTCATCTAAGTACACTGTGTGGAATTTTGTTCCAAAAAATTTATTTGAACAGTTCA
GAAGAGTGGCAAACTTTTATTTTCTTATTATATTTTTGGTTCAGCTTATGATTGATACACCTACCAGTCCAGTTACCAGTGGACTTCCAT
TATTCTTTGTGATAACAGTAACTGCCATAAAGCAGGGATATGAAGATTGGTTACGGCATAACTCAGATAATGAAGTAAATGGAGCTCCTG
TTTATGTTGTTCGAAGTGGTGGCCTTGTAAAAACTAGATCAAAAAACATTCGGGTGGGTGATATTGTTCGAATAGCCAAAGATGAAATTT
TTCCTGCAGACTTGGTGCTTCTGTCCTCAGATCGACTGGATGGTTCCTGTCACGTTACAACTGCTAGTTTGGACGGAGAAACTAACCTGA
AGACACATGTGGCAGTTCCAGAAACAGCATTATTACAAACAGTTGCCAATTTGGACACTCTAGTAGCTGTAATAGAATGCCAGCAACCAG
AAGCAGACTTATACAGATTCATGGGACGAATGATCATAACCCAACAAATGGAAGAAATTGTAAGACCTCTGGGGCCGGAGAGTCTCCTGC
TTCGTGGAGCCAGATTAAAAAACACAAAAGAAATTTTTGGTGTTGCGGTATACACTGGAATGGAAACTAAGATGGCATTAAATTACAAGA
GCAAATCACAGAAACGATCTGCAGTAGAAAAGTCAATGAATACATTTTTGATAATTTATCTAGTAATTCTTATATCTGAAGCTGTCATCA
GCACTATCTTGAAGTATACATGGCAAGCTGAAGAAAAATGGGATGAACCTTGGTATAACCAAAAAACAGAACATCAAAGAAATAGCAGTA
AGATTCTGAGATTTATTTCAGACTTCCTTGCTTTTTTGGTTCTCTACAATTTCATCATTCCAATTTCATTATATGTGACAGTCGAAATGC
AGAAATTTCTTGGATCATTTTTTATTGGCTGGGATCTTGATCTGTATCATGAAGAATCAGATCAGAAAGCTCAAGTCAATACTTCCGATC
TGAATGAAGAGCTTGGACAGGTAGAGTACGTGTTTACAGATAAAACTGGTACACTGACAGAAAATGAGATGCAGTTTCGGGAATGTTCAA
TTAATGGCATGAAATACCAAGAAATTAATGGTAGACTTGTACCCGAAGGACCAACACCAGACTCTTCAGAAGGAAACTTATCTTATCTTA
GTAGTTTATCCCATCTTAACAACTTATCCCATCTTACAACCAGTTCCTCTTTCAGAACCAGTCCTGAAAATGAAACTGAACTAATTAAAG
AACATGATCTCTTCTTTAAAGCAGTCAGTCTCTGTCACACTGTACAGATTAGCAATGTTCAAACTGACTGCACTGGTGATGGTCCCTGGC
AATCCAACCTGGCACCATCGCAGTTGGAGTACTATGCATCTTCACCAGATGAAAAGGCTCTAGTAGAAGCTGCTGCAAGGATTGGTATTG
TGTTTATTGGCAATTCTGAAGAAACTATGGAGGTTAAAACTCTTGGAAAACTGGAACGGTACAAACTGCTTCATATTCTGGAATTTGATT
CAGATCGTAGGAGAATGAGTGTAATTGTTCAGGCACCTTCAGGTGAGAAGTTATTATTTGCTAAAGGAGCTGAGTCATCAATTCTCCCTA
AATGTATAGGTGGAGAAATAGAAAAAACCAGAATTCATGTAGATGAATTTGCTTTGGTGAAGCATCCGGTTACTGGGCAATTTCTATATC
AGGACAGCAACTGGGCCAGCAAAGTTGAGAAACTCACTTTAGACAATGCTGCTTTCCCTTTCCTTGCATATTCTGGAATCCCAGCAGTTT
CTTTCTGTTTTTGCGAGGACACAGATTATCCTTATTTGGGTACCACCATGGACACCTATAAGGAACTGATTGAGAGGATTCCTGAGTTGA
ACAAAGTGGCACGAGCAGCTGCAGAGGTCGCTGGTCAGTTCGTGATTAAACTAACCCATGATGTTGAATTGAACCTGGACTATGAGAGGT
ACAACAGCCAACTGCTTTCATTTGTGAGGGATCTGAACCAATACAGAGCAGACATAAAGGAAATGGGCCTGAGTTTACAGTGGCTGTATT
CTGCTCGTGGAGACTTCTTCCGTGCTACTTCCAGACTAACAACAGATTTCGGGAATGCTGAGAAAACAGACAGATTTGTCATGAAGAAAC
TCAATGATCGTGTCATGAGAGTGGAGTATCACTTCCTCTCTCCCTACGTATCTCCAAAAGAGTCTCCTTTCCGACATGTCTTCTGGGGCT
CCGGCTCTCACACGCTGCCAGCTTTACTGGAGAACTTGAAACTGCGTAAACAAAATAACGGTGCTTTTAATGAAACGCTGTTCAGAAACC
AGTTGGCTCTAGCTACTTGGACTATTCAGGGAGCTGCAAATGCCCTCTCTGGTGACGTTTGGGACATTGACAATGAGTTTTAAATGTGAT
ACCCATAGCTTCCATGAGAACAGCAGGGTAGTCTGGTTTCTAGACTTGTGCTGATCGTGCTAAATTTTCAGTAGGGCTACAAAACCTGAT
GTTAAAATTCCATCCCATCATCTTGGTACTACTAGATGTCTTTAGGCAGCAGCTTTTAATACAGGGTAGATAACCTGTACTTCAAGTTAA
AGTGAATAACCACTTAAAAAATGTCCATGATGGAATATTCCCCTATCTCTAGAATTTTAAGTGCTTTGTAATGGGAACTGCCTCTTTCCT
GTTGTTGTTAATGAAAATGTCAGAAACCAGTTATGTGAATGATCTCTCTGAATCCTAAGGGCTGGTCTCTGCTGAAGGTTGTAAGTGGTC
GCTTACTTTGAGTGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTC
CATAAGGAATGTAGCTGGTTTCCTCATTCCTGAAAGAAACAGTTAACTTTCAGAAGAGATGGGCTTGTTTTCTTGCCAATGAGGTCTGAA
ATGGAGGTCCTTCTGCTGGATAAAATGAGGTTCAACTGTTGATTGCAGGAATAAGGCCTTAATATGTTAACCTCAGTGTCATTTATGAAA
AGAGGGGACCAGAAGCCAAAGACTTAGTATATTTTCTTTTCCTCTGTCCCTTCCCCCATAAGCCTCCATTTAGTTCTTTGTTATTTTTGT
TTCTTCCAAAGCACATTGAAAGAGAACCAGTTTCAGGTGTTTAGTTGCAGACTCAGTTTGTCAGACTTTAAAGAATAATATGCTGCCAAA
TTTTGGCCAAAGTGTTAATCTTAGGGGAGAGCTTTCTGTCCTTTTGGCACTGAGATATTTATTGTTTATTTATCAGTGACAGAGTTCACT
ATAAATGGTGTTTTTTTAATAGAATATAATTATCGGAAGCAGTGCCTTCCATAATTATGACAGTTATACTGTCGGTTTTTTTTAAATAAA
AGCAGCATCTGCTAATAAAACCCAACAGATACTGGAAGTTTTGCATTTATGGTCAACACTTAAGGGTTTTAGAAAACAGCCGTCAGCCAA
ATGTAATTGAATAAAGTTGAAGCTAAGATTTAGAGATGAATTAAATTTAATTAGGGGTTGCTAAGAAGCGAGCACTGACCAGATAAGAAT
GCTGGTTTTCCTAAATGCAGTGAATTGTGACCAAGTTATAAATCAATGTCACTTAAAGGCTGTGGTAGTACTCCTGCAAAATTTTATAGC
TCAGTTTATCCAAGGTGTAACTCTAATTCCCATTTTGCAAAATTTCCAGTACCTTTGTCACAATCCTAACACATTATCGGGAGCAGTGTC
TTCCATAATGTATAAAGAACAAGGTAGTTTTTACCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGTGTA
AGTAATTATCGGGAACAGTGTTTCCCATAATTTTCTTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCCC
AACTCCTATAATTCCCTATCTTTTAGTTTTAGTTGCAGAAACATTTTGTGGTCATTAAGCATTGGGTGGGTAAATTCAACCACTGTAAAA
TGAAATTACTACAAAATTTGAAATTTAGCTTGGGTTTTTGTTACCTTTATGGTTTCTCCAGGTCCTCTACTTAATGAGATAGTAGCATAC
ATTTATAATGTTTGCTATTGACAAGTCATTTTAACTTTATCACATTATTTGCATGTTACCTCCTATAAACTTAGTGCGGACAAGTTTTAA
TCCAGAATTGACCTTTTGACTTAAAGCAGAGGGACTTTGTATAGAAGGTTTGGGGGCTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACA
CGTCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAGCTCCGTGAGTGAACCATCATTATAAACGTGATGA
TCAGCTGTTTGTCATAGGGCAGTTGGAAACGGCCTCCTAGGGAAAAGTTCATAGGGTCTCTTCAGGTTCTTAGTGTCACTTACCTAGATT
TACAGCCTCACTTGAATGTGTCACTACTCACAGTCTCTTTAATCTTCAGTTTTATCTTTAATCTCCTCTTTTATCTTGGACTGACATTTA
GCGTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACACGTACTTAAATGAAAGCATGTGGCATGTTCATCGT
ATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTTTTCTACAGTTAGGGTTGAGTTACTTCCTA
TCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGACTAGTGACAAGCTCCTGGTCTTGAGATGTCTTCTCGTTAA
GGAGATGGGCCTTTTGGAGGTAAAGGATAAAATGAATGAGTTCTGTCATGATTCACTATTCTAGAACTTGCATGACCTTTACTGTGTTAG
CTCTTTGAATGTTCTTGAAATTTTAGACTTTCTTTGTAAACAAATGATATGTCCTTATCATTGTATAAAAGCTGTTATGTGCAACAGTGT

>7743_7743_1_ATP11B-TFRC_ATP11B_chr3_182587119_ENST00000323116_TFRC_chr3_195785503_ENST00000360110_length(amino acids)=888AA_BP=640
MQPRGPRAPRDPDGDDGGMWRWIRQQLGFDPPHQSDTRTIYVANRFPQNGLYTPQKFIDNRIISSKYTVWNFVPKNLFEQFRRVANFYFL
IIFLVQLMIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHNSDNEVNGAPVYVVRSGGLVKTRSKNIRVGDIVRIAKDEIFPADLVLLS
SDRLDGSCHVTTASLDGETNLKTHVAVPETALLQTVANLDTLVAVIECQQPEADLYRFMGRMIITQQMEEIVRPLGPESLLLRGARLKNT
KEIFGVAVYTGMETKMALNYKSKSQKRSAVEKSMNTFLIIYLVILISEAVISTILKYTWQAEEKWDEPWYNQKTEHQRNSSKILRFISDF
LAFLVLYNFIIPISLYVTVEMQKFLGSFFIGWDLDLYHEESDQKAQVNTSDLNEELGQVEYVFTDKTGTLTENEMQFRECSINGMKYQEI
NGRLVPEGPTPDSSEGNLSYLSSLSHLNNLSHLTTSSSFRTSPENETELIKEHDLFFKAVSLCHTVQISNVQTDCTGDGPWQSNLAPSQL
EYYASSPDEKALVEAAARIGIVFIGNSEETMEVKTLGKLERYKLLHILEFDSDRRRMSVIVQAPSGEKLLFAKGAESSILPKCIGGEIEK
TRIHVDEFALVKHPVTGQFLYQDSNWASKVEKLTLDNAAFPFLAYSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAE
VAGQFVIKLTHDVELNLDYERYNSQLLSFVRDLNQYRADIKEMGLSLQWLYSARGDFFRATSRLTTDFGNAEKTDRFVMKKLNDRVMRVE

--------------------------------------------------------------
>7743_7743_2_ATP11B-TFRC_ATP11B_chr3_182587119_ENST00000323116_TFRC_chr3_195785503_ENST00000420415_length(transcript)=5531nt_BP=2126nt
GGTCAATAATGAAGGTGGCTGCGGCGCGGCGGCAGGCTCAGCTGCGCCGGGCGGGGGCGGCGCCGGGGCCGCGCCTGTAGGACTCGGGGC
CGACGCCGCGGGATGGGGACGCGGCGCGGGGAGTGAGGCAGTGGCGGCGGCGGCGGTAAGCGGAACTTCGGCCCGAGGGGCTCGCCCGCT
CCCGCCTCTGTCTTGTCGGCCTCCACCTGCAGCCCCGCGGCCCCCGCGCCCCGCGGGACCCGGACGGCGACGACGGGGGAATGTGGCGCT
GGATCCGGCAGCAGCTGGGTTTTGACCCACCACATCAGAGTGACACAAGAACCATCTACGTAGCCAACAGGTTTCCTCAGAATGGCCTTT
ACACACCTCAGAAATTTATAGATAACAGGATCATTTCATCTAAGTACACTGTGTGGAATTTTGTTCCAAAAAATTTATTTGAACAGTTCA
GAAGAGTGGCAAACTTTTATTTTCTTATTATATTTTTGGTTCAGCTTATGATTGATACACCTACCAGTCCAGTTACCAGTGGACTTCCAT
TATTCTTTGTGATAACAGTAACTGCCATAAAGCAGGGATATGAAGATTGGTTACGGCATAACTCAGATAATGAAGTAAATGGAGCTCCTG
TTTATGTTGTTCGAAGTGGTGGCCTTGTAAAAACTAGATCAAAAAACATTCGGGTGGGTGATATTGTTCGAATAGCCAAAGATGAAATTT
TTCCTGCAGACTTGGTGCTTCTGTCCTCAGATCGACTGGATGGTTCCTGTCACGTTACAACTGCTAGTTTGGACGGAGAAACTAACCTGA
AGACACATGTGGCAGTTCCAGAAACAGCATTATTACAAACAGTTGCCAATTTGGACACTCTAGTAGCTGTAATAGAATGCCAGCAACCAG
AAGCAGACTTATACAGATTCATGGGACGAATGATCATAACCCAACAAATGGAAGAAATTGTAAGACCTCTGGGGCCGGAGAGTCTCCTGC
TTCGTGGAGCCAGATTAAAAAACACAAAAGAAATTTTTGGTGTTGCGGTATACACTGGAATGGAAACTAAGATGGCATTAAATTACAAGA
GCAAATCACAGAAACGATCTGCAGTAGAAAAGTCAATGAATACATTTTTGATAATTTATCTAGTAATTCTTATATCTGAAGCTGTCATCA
GCACTATCTTGAAGTATACATGGCAAGCTGAAGAAAAATGGGATGAACCTTGGTATAACCAAAAAACAGAACATCAAAGAAATAGCAGTA
AGATTCTGAGATTTATTTCAGACTTCCTTGCTTTTTTGGTTCTCTACAATTTCATCATTCCAATTTCATTATATGTGACAGTCGAAATGC
AGAAATTTCTTGGATCATTTTTTATTGGCTGGGATCTTGATCTGTATCATGAAGAATCAGATCAGAAAGCTCAAGTCAATACTTCCGATC
TGAATGAAGAGCTTGGACAGGTAGAGTACGTGTTTACAGATAAAACTGGTACACTGACAGAAAATGAGATGCAGTTTCGGGAATGTTCAA
TTAATGGCATGAAATACCAAGAAATTAATGGTAGACTTGTACCCGAAGGACCAACACCAGACTCTTCAGAAGGAAACTTATCTTATCTTA
GTAGTTTATCCCATCTTAACAACTTATCCCATCTTACAACCAGTTCCTCTTTCAGAACCAGTCCTGAAAATGAAACTGAACTAATTAAAG
AACATGATCTCTTCTTTAAAGCAGTCAGTCTCTGTCACACTGTACAGATTAGCAATGTTCAAACTGACTGCACTGGTGATGGTCCCTGGC
AATCCAACCTGGCACCATCGCAGTTGGAGTACTATGCATCTTCACCAGATGAAAAGGCTCTAGTAGAAGCTGCTGCAAGGATTGGTATTG
TGTTTATTGGCAATTCTGAAGAAACTATGGAGGTTAAAACTCTTGGAAAACTGGAACGGTACAAACTGCTTCATATTCTGGAATTTGATT
CAGATCGTAGGAGAATGAGTGTAATTGTTCAGGCACCTTCAGGTGAGAAGTTATTATTTGCTAAAGGAGCTGAGTCATCAATTCTCCCTA
AATGTATAGGTGGAGAAATAGAAAAAACCAGAATTCATGTAGATGAATTTGCTTTGGTGAAGCATCCGGTTACTGGGCAATTTCTATATC
AGGACAGCAACTGGGCCAGCAAAGTTGAGAAACTCACTTTAGACAATGCTGCTTTCCCTTTCCTTGCATATTCTGGAATCCCAGCAGTTT
CTTTCTGTTTTTGCGAGGACACAGATTATCCTTATTTGGGTACCACCATGGACACCTATAAGGAACTGATTGAGAGGATTCCTGAGTTGA
ACAAAGTGGCACGAGCAGCTGCAGAGGTCGCTGGTCAGTTCGTGATTAAACTAACCCATGATGTTGAATTGAACCTGGACTATGAGAGGT
ACAACAGCCAACTGCTTTCATTTGTGAGGGATCTGAACCAATACAGAGCAGACATAAAGGAAATGGGCCTGAGTTTACAGTGGCTGTATT
CTGCTCGTGGAGACTTCTTCCGTGCTACTTCCAGACTAACAACAGATTTCGGGAATGCTGAGAAAACAGACAGATTTGTCATGAAGAAAC
TCAATGATCGTGTCATGAGAGTGGAGTATCACTTCCTCTCTCCCTACGTATCTCCAAAAGAGTCTCCTTTCCGACATGTCTTCTGGGGCT
CCGGCTCTCACACGCTGCCAGCTTTACTGGAGAACTTGAAACTGCGTAAACAAAATAACGGTGCTTTTAATGAAACGCTGTTCAGAAACC
AGTTGGCTCTAGCTACTTGGACTATTCAGGGAGCTGCAAATGCCCTCTCTGGTGACGTTTGGGACATTGACAATGAGTTTTAAATGTGAT
ACCCATAGCTTCCATGAGAACAGCAGGGTAGTCTGGTTTCTAGACTTGTGCTGATCGTGCTAAATTTTCAGTAGGGCTACAAAACCTGAT
GTTAAAATTCCATCCCATCATCTTGGTACTACTAGATGTCTTTAGGCAGCAGCTTTTAATACAGGGTAGATAACCTGTACTTCAAGTTAA
AGTGAATAACCACTTAAAAAATGTCCATGATGGAATATTCCCCTATCTCTAGAATTTTAAGTGCTTTGTAATGGGAACTGCCTCTTTCCT
GTTGTTGTTAATGAAAATGTCAGAAACCAGTTATGTGAATGATCTCTCTGAATCCTAAGGGCTGGTCTCTGCTGAAGGTTGTAAGTGGTC
GCTTACTTTGAGTGATCCTCCAACTTCATTTGATGCTAAATAGGAGATACCAGGTTGAAAGACCTTCTCCAAATGAGATCTAAGCCTTTC
CATAAGGAATGTAGCTGGTTTCCTCATTCCTGAAAGAAACAGTTAACTTTCAGAAGAGATGGGCTTGTTTTCTTGCCAATGAGGTCTGAA
ATGGAGGTCCTTCTGCTGGATAAAATGAGGTTCAACTGTTGATTGCAGGAATAAGGCCTTAATATGTTAACCTCAGTGTCATTTATGAAA
AGAGGGGACCAGAAGCCAAAGACTTAGTATATTTTCTTTTCCTCTGTCCCTTCCCCCATAAGCCTCCATTTAGTTCTTTGTTATTTTTGT
TTCTTCCAAAGCACATTGAAAGAGAACCAGTTTCAGGTGTTTAGTTGCAGACTCAGTTTGTCAGACTTTAAAGAATAATATGCTGCCAAA
TTTTGGCCAAAGTGTTAATCTTAGGGGAGAGCTTTCTGTCCTTTTGGCACTGAGATATTTATTGTTTATTTATCAGTGACAGAGTTCACT
ATAAATGGTGTTTTTTTAATAGAATATAATTATCGGAAGCAGTGCCTTCCATAATTATGACAGTTATACTGTCGGTTTTTTTTAAATAAA
AGCAGCATCTGCTAATAAAACCCAACAGATACTGGAAGTTTTGCATTTATGGTCAACACTTAAGGGTTTTAGAAAACAGCCGTCAGCCAA
ATGTAATTGAATAAAGTTGAAGCTAAGATTTAGAGATGAATTAAATTTAATTAGGGGTTGCTAAGAAGCGAGCACTGACCAGATAAGAAT
GCTGGTTTTCCTAAATGCAGTGAATTGTGACCAAGTTATAAATCAATGTCACTTAAAGGCTGTGGTAGTACTCCTGCAAAATTTTATAGC
TCAGTTTATCCAAGGTGTAACTCTAATTCCCATTTTGCAAAATTTCCAGTACCTTTGTCACAATCCTAACACATTATCGGGAGCAGTGTC
TTCCATAATGTATAAAGAACAAGGTAGTTTTTACCTACCACAGTGTCTGTATCGGAGACAGTGATCTCCATATGTTACACTAAGGGTGTA
AGTAATTATCGGGAACAGTGTTTCCCATAATTTTCTTCATGCAATGACATCTTCAAAGCTTGAAGATCGTTAGTATCTAACATGTATCCC
AACTCCTATAATTCCCTATCTTTTAGTTTTAGTTGCAGAAACATTTTGTGGTCATTAAGCATTGGGTGGGTAAATTCAACCACTGTAAAA
TGAAATTACTACAAAATTTGAAATTTAGCTTGGGTTTTTGTTACCTTTATGGTTTCTCCAGGTCCTCTACTTAATGAGATAGTAGCATAC
ATTTATAATGTTTGCTATTGACAAGTCATTTTAACTTTATCACATTATTTGCATGTTACCTCCTATAAACTTAGTGCGGACAAGTTTTAA
TCCAGAATTGACCTTTTGACTTAAAGCAGAGGGACTTTGTATAGAAGGTTTGGGGGCTGTGGGGAAGGAGAGTCCCCTGAAGGTCTGACA
CGTCTGCCTACCCATTCGTGGTGATCAATTAAATGTAGGTATGAATAAGTTCGAAGCTCCGTGAGTGAACCATCATTATAAACGTGATGA
TCAGCTGTTTGTCATAGGGCAGTTGGAAACGGCCTCCTAGGGAAAAGTTCATAGGGTCTCTTCAGGTTCTTAGTGTCACTTACCTAGATT
TACAGCCTCACTTGAATGTGTCACTACTCACAGTCTCTTTAATCTTCAGTTTTATCTTTAATCTCCTCTTTTATCTTGGACTGACATTTA
GCGTAGCTAAGTGAAAAGGTCATAGCTGAGATTCCTGGTTCGGGTGTTACGCACACGTACTTAAATGAAAGCATGTGGCATGTTCATCGT
ATAACACAATATGAATACAGGGCATGCATTTTGCAGCAGTGAGTCTCTTCAGAAAACCCTTTTCTACAGTTAGGGTTGAGTTACTTCCTA
TCAAGCCAGTACGTGCTAACAGGCTCAATATTCCTGAATGAAATATCAGACTAGTGACAAGCTCCTGGTCTTGAGATGTCTTCTCGTTAA
GGAGATGGGCCTTTTGGAGGTAAAGGATAAAATGAATGAGTTCTGTCATGATTCACTATTCTAGAACTTGCATGACCTTTACTGTGTTAG
CTCTTTGAATGTTCTTGAAATTTTAGACTTTCTTTGTAAACAAATGATATGTCCTTATCATTGTATAAAAGCTGTTATGTGCAACAGTGT

>7743_7743_2_ATP11B-TFRC_ATP11B_chr3_182587119_ENST00000323116_TFRC_chr3_195785503_ENST00000420415_length(amino acids)=888AA_BP=640
MQPRGPRAPRDPDGDDGGMWRWIRQQLGFDPPHQSDTRTIYVANRFPQNGLYTPQKFIDNRIISSKYTVWNFVPKNLFEQFRRVANFYFL
IIFLVQLMIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHNSDNEVNGAPVYVVRSGGLVKTRSKNIRVGDIVRIAKDEIFPADLVLLS
SDRLDGSCHVTTASLDGETNLKTHVAVPETALLQTVANLDTLVAVIECQQPEADLYRFMGRMIITQQMEEIVRPLGPESLLLRGARLKNT
KEIFGVAVYTGMETKMALNYKSKSQKRSAVEKSMNTFLIIYLVILISEAVISTILKYTWQAEEKWDEPWYNQKTEHQRNSSKILRFISDF
LAFLVLYNFIIPISLYVTVEMQKFLGSFFIGWDLDLYHEESDQKAQVNTSDLNEELGQVEYVFTDKTGTLTENEMQFRECSINGMKYQEI
NGRLVPEGPTPDSSEGNLSYLSSLSHLNNLSHLTTSSSFRTSPENETELIKEHDLFFKAVSLCHTVQISNVQTDCTGDGPWQSNLAPSQL
EYYASSPDEKALVEAAARIGIVFIGNSEETMEVKTLGKLERYKLLHILEFDSDRRRMSVIVQAPSGEKLLFAKGAESSILPKCIGGEIEK
TRIHVDEFALVKHPVTGQFLYQDSNWASKVEKLTLDNAAFPFLAYSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAE
VAGQFVIKLTHDVELNLDYERYNSQLLSFVRDLNQYRADIKEMGLSLQWLYSARGDFFRATSRLTTDFGNAEKTDRFVMKKLNDRVMRVE

--------------------------------------------------------------

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Fusion Gene PPI Analysis for ATP11B-TFRC


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for ATP11B-TFRC


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for ATP11B-TFRC


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource