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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:RTN3-HRASLS5 (FusionGDB2 ID:78557) |
Fusion Gene Summary for RTN3-HRASLS5 |
Fusion gene summary |
Fusion gene information | Fusion gene name: RTN3-HRASLS5 | Fusion gene ID: 78557 | Hgene | Tgene | Gene symbol | RTN3 | HRASLS5 | Gene ID | 10313 | 117245 |
Gene name | reticulon 3 | phospholipase A and acyltransferase 5 | |
Synonyms | ASYIP|HAP|NSPL2|NSPLII|RTN3-A1 | HRASLS5|HRLP5|HRSL5|PLAAT-5|RLP1|iNAT | |
Cytomap | 11q13.1 | 11q12.3 | |
Type of gene | protein-coding | protein-coding | |
Description | reticulon-3ASY interacting proteinNSP-like protein 2NSP-like protein IIhomolog of ASY proteinneuroendocrine-specific protein-like 2neuroendocrine-specific protein-like II | phospholipase A and acyltransferase 5Ca(2+)-independent N-acyltransferaseH-rev107-like protein 5HRAS like suppressor family member 5HRAS-like suppressor 5calcium-independent phosphatidylethanolamine N-acyltransferaselecithin-retinol acyltransferase | |
Modification date | 20200327 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000538995, ENST00000339997, ENST00000341307, ENST00000354497, ENST00000356000, ENST00000377819, ENST00000537981, ENST00000540798, | ENST00000301790, ENST00000539221, ENST00000540857, | |
Fusion gene scores | * DoF score | 12 X 7 X 5=420 | 2 X 2 X 2=8 |
# samples | 13 | 2 | |
** MAII score | log2(13/420*10)=-1.69187770463767 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/8*10)=1.32192809488736 | |
Context | PubMed: RTN3 [Title/Abstract] AND HRASLS5 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | RTN3(63449250)-HRASLS5(63233844), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | RTN3 | GO:0071787 | endoplasmic reticulum tubular network formation | 25612671 |
Tgene | HRASLS5 | GO:0070292 | N-acylphosphatidylethanolamine metabolic process | 19000777|22825852 |
Fusion gene breakpoints across RTN3 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across HRASLS5 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUAD | TCGA-91-6831-01A | RTN3 | chr11 | 63449250 | - | HRASLS5 | chr11 | 63233844 | - |
ChimerDB4 | LUAD | TCGA-91-6831-01A | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
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Fusion Gene ORF analysis for RTN3-HRASLS5 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
3UTR-3CDS | ENST00000538995 | ENST00000301790 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
3UTR-3CDS | ENST00000538995 | ENST00000539221 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
3UTR-3CDS | ENST00000538995 | ENST00000540857 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000339997 | ENST00000301790 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000339997 | ENST00000539221 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000339997 | ENST00000540857 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000341307 | ENST00000301790 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000341307 | ENST00000539221 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000341307 | ENST00000540857 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000354497 | ENST00000301790 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000354497 | ENST00000539221 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000354497 | ENST00000540857 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000356000 | ENST00000301790 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000356000 | ENST00000539221 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000356000 | ENST00000540857 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000377819 | ENST00000301790 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000377819 | ENST00000539221 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000377819 | ENST00000540857 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000537981 | ENST00000301790 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000537981 | ENST00000539221 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000537981 | ENST00000540857 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000540798 | ENST00000301790 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000540798 | ENST00000539221 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
In-frame | ENST00000540798 | ENST00000540857 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000341307 | RTN3 | chr11 | 63449250 | + | ENST00000540857 | HRASLS5 | chr11 | 63233844 | - | 2778 | 333 | 110 | 688 | 192 |
ENST00000341307 | RTN3 | chr11 | 63449250 | + | ENST00000539221 | HRASLS5 | chr11 | 63233844 | - | 882 | 333 | 110 | 610 | 166 |
ENST00000341307 | RTN3 | chr11 | 63449250 | + | ENST00000301790 | HRASLS5 | chr11 | 63233844 | - | 855 | 333 | 110 | 688 | 192 |
ENST00000356000 | RTN3 | chr11 | 63449250 | + | ENST00000540857 | HRASLS5 | chr11 | 63233844 | - | 2774 | 329 | 106 | 684 | 192 |
ENST00000356000 | RTN3 | chr11 | 63449250 | + | ENST00000539221 | HRASLS5 | chr11 | 63233844 | - | 878 | 329 | 106 | 606 | 166 |
ENST00000356000 | RTN3 | chr11 | 63449250 | + | ENST00000301790 | HRASLS5 | chr11 | 63233844 | - | 851 | 329 | 106 | 684 | 192 |
ENST00000377819 | RTN3 | chr11 | 63449250 | + | ENST00000540857 | HRASLS5 | chr11 | 63233844 | - | 2741 | 296 | 73 | 651 | 192 |
ENST00000377819 | RTN3 | chr11 | 63449250 | + | ENST00000539221 | HRASLS5 | chr11 | 63233844 | - | 845 | 296 | 73 | 573 | 166 |
ENST00000377819 | RTN3 | chr11 | 63449250 | + | ENST00000301790 | HRASLS5 | chr11 | 63233844 | - | 818 | 296 | 73 | 651 | 192 |
ENST00000339997 | RTN3 | chr11 | 63449250 | + | ENST00000540857 | HRASLS5 | chr11 | 63233844 | - | 2741 | 296 | 73 | 651 | 192 |
ENST00000339997 | RTN3 | chr11 | 63449250 | + | ENST00000539221 | HRASLS5 | chr11 | 63233844 | - | 845 | 296 | 73 | 573 | 166 |
ENST00000339997 | RTN3 | chr11 | 63449250 | + | ENST00000301790 | HRASLS5 | chr11 | 63233844 | - | 818 | 296 | 73 | 651 | 192 |
ENST00000540798 | RTN3 | chr11 | 63449250 | + | ENST00000540857 | HRASLS5 | chr11 | 63233844 | - | 2728 | 283 | 60 | 638 | 192 |
ENST00000540798 | RTN3 | chr11 | 63449250 | + | ENST00000539221 | HRASLS5 | chr11 | 63233844 | - | 832 | 283 | 60 | 560 | 166 |
ENST00000540798 | RTN3 | chr11 | 63449250 | + | ENST00000301790 | HRASLS5 | chr11 | 63233844 | - | 805 | 283 | 60 | 638 | 192 |
ENST00000537981 | RTN3 | chr11 | 63449250 | + | ENST00000540857 | HRASLS5 | chr11 | 63233844 | - | 2724 | 279 | 56 | 634 | 192 |
ENST00000537981 | RTN3 | chr11 | 63449250 | + | ENST00000539221 | HRASLS5 | chr11 | 63233844 | - | 828 | 279 | 56 | 556 | 166 |
ENST00000537981 | RTN3 | chr11 | 63449250 | + | ENST00000301790 | HRASLS5 | chr11 | 63233844 | - | 801 | 279 | 56 | 634 | 192 |
ENST00000354497 | RTN3 | chr11 | 63449250 | + | ENST00000540857 | HRASLS5 | chr11 | 63233844 | - | 2651 | 206 | 64 | 561 | 165 |
ENST00000354497 | RTN3 | chr11 | 63449250 | + | ENST00000539221 | HRASLS5 | chr11 | 63233844 | - | 755 | 206 | 64 | 483 | 139 |
ENST00000354497 | RTN3 | chr11 | 63449250 | + | ENST00000301790 | HRASLS5 | chr11 | 63233844 | - | 728 | 206 | 64 | 561 | 165 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000341307 | ENST00000540857 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.002838281 | 0.99716175 |
ENST00000341307 | ENST00000539221 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.006318238 | 0.9936818 |
ENST00000341307 | ENST00000301790 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.003145432 | 0.9968546 |
ENST00000356000 | ENST00000540857 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.001965417 | 0.99803454 |
ENST00000356000 | ENST00000539221 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.006012592 | 0.99398744 |
ENST00000356000 | ENST00000301790 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.00266902 | 0.997331 |
ENST00000377819 | ENST00000540857 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.003134414 | 0.9968656 |
ENST00000377819 | ENST00000539221 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.006425244 | 0.9935748 |
ENST00000377819 | ENST00000301790 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.003110616 | 0.9968894 |
ENST00000339997 | ENST00000540857 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.003134414 | 0.9968656 |
ENST00000339997 | ENST00000539221 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.006425244 | 0.9935748 |
ENST00000339997 | ENST00000301790 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.003110616 | 0.9968894 |
ENST00000540798 | ENST00000540857 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.00242402 | 0.99757594 |
ENST00000540798 | ENST00000539221 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.00527722 | 0.99472284 |
ENST00000540798 | ENST00000301790 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.002671995 | 0.99732804 |
ENST00000537981 | ENST00000540857 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.002979453 | 0.99702054 |
ENST00000537981 | ENST00000539221 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.006642487 | 0.9933575 |
ENST00000537981 | ENST00000301790 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.003091899 | 0.9969081 |
ENST00000354497 | ENST00000540857 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.003802243 | 0.99619776 |
ENST00000354497 | ENST00000539221 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.009824766 | 0.99017525 |
ENST00000354497 | ENST00000301790 | RTN3 | chr11 | 63449250 | + | HRASLS5 | chr11 | 63233844 | - | 0.004035741 | 0.9959643 |
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Fusion Genomic Features for RTN3-HRASLS5 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for RTN3-HRASLS5 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr11:63449250/chr11:63233844) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000339997 | + | 1 | 8 | 844_1032 | 47 | 1014.0 | Domain | Reticulon |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000341307 | + | 1 | 6 | 844_1032 | 47 | 242.0 | Domain | Reticulon |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000354497 | + | 1 | 4 | 844_1032 | 47 | 215.0 | Domain | Reticulon |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000356000 | + | 1 | 8 | 844_1032 | 47 | 256.0 | Domain | Reticulon |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000377819 | + | 1 | 9 | 844_1032 | 47 | 1033.0 | Domain | Reticulon |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000537981 | + | 1 | 7 | 844_1032 | 47 | 237.0 | Domain | Reticulon |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000540798 | + | 1 | 8 | 844_1032 | 47 | 921.0 | Domain | Reticulon |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000339997 | + | 1 | 8 | 864_887 | 47 | 1014.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000339997 | + | 1 | 8 | 948_968 | 47 | 1014.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000339997 | + | 1 | 8 | 973_993 | 47 | 1014.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000341307 | + | 1 | 6 | 864_887 | 47 | 242.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000341307 | + | 1 | 6 | 948_968 | 47 | 242.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000341307 | + | 1 | 6 | 973_993 | 47 | 242.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000354497 | + | 1 | 4 | 864_887 | 47 | 215.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000354497 | + | 1 | 4 | 948_968 | 47 | 215.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000354497 | + | 1 | 4 | 973_993 | 47 | 215.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000356000 | + | 1 | 8 | 864_887 | 47 | 256.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000356000 | + | 1 | 8 | 948_968 | 47 | 256.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000356000 | + | 1 | 8 | 973_993 | 47 | 256.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000377819 | + | 1 | 9 | 864_887 | 47 | 1033.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000377819 | + | 1 | 9 | 948_968 | 47 | 1033.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000377819 | + | 1 | 9 | 973_993 | 47 | 1033.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000537981 | + | 1 | 7 | 864_887 | 47 | 237.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000537981 | + | 1 | 7 | 948_968 | 47 | 237.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000537981 | + | 1 | 7 | 973_993 | 47 | 237.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000540798 | + | 1 | 8 | 864_887 | 47 | 921.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000540798 | + | 1 | 8 | 948_968 | 47 | 921.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000540798 | + | 1 | 8 | 973_993 | 47 | 921.0 | Intramembrane | Helical |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000339997 | + | 1 | 8 | 2_863 | 47 | 1014.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000339997 | + | 1 | 8 | 888_947 | 47 | 1014.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000339997 | + | 1 | 8 | 969_972 | 47 | 1014.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000339997 | + | 1 | 8 | 994_1032 | 47 | 1014.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000341307 | + | 1 | 6 | 2_863 | 47 | 242.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000341307 | + | 1 | 6 | 888_947 | 47 | 242.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000341307 | + | 1 | 6 | 969_972 | 47 | 242.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000341307 | + | 1 | 6 | 994_1032 | 47 | 242.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000354497 | + | 1 | 4 | 2_863 | 47 | 215.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000354497 | + | 1 | 4 | 888_947 | 47 | 215.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000354497 | + | 1 | 4 | 969_972 | 47 | 215.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000354497 | + | 1 | 4 | 994_1032 | 47 | 215.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000356000 | + | 1 | 8 | 2_863 | 47 | 256.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000356000 | + | 1 | 8 | 888_947 | 47 | 256.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000356000 | + | 1 | 8 | 969_972 | 47 | 256.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000356000 | + | 1 | 8 | 994_1032 | 47 | 256.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000377819 | + | 1 | 9 | 2_863 | 47 | 1033.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000377819 | + | 1 | 9 | 888_947 | 47 | 1033.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000377819 | + | 1 | 9 | 969_972 | 47 | 1033.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000377819 | + | 1 | 9 | 994_1032 | 47 | 1033.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000537981 | + | 1 | 7 | 2_863 | 47 | 237.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000537981 | + | 1 | 7 | 888_947 | 47 | 237.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000537981 | + | 1 | 7 | 969_972 | 47 | 237.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000537981 | + | 1 | 7 | 994_1032 | 47 | 237.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000540798 | + | 1 | 8 | 2_863 | 47 | 921.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000540798 | + | 1 | 8 | 888_947 | 47 | 921.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000540798 | + | 1 | 8 | 969_972 | 47 | 921.0 | Topological domain | Cytoplasmic |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000540798 | + | 1 | 8 | 994_1032 | 47 | 921.0 | Topological domain | Cytoplasmic |
Tgene | HRASLS5 | chr11:63449250 | chr11:63233844 | ENST00000301790 | 3 | 6 | 135_249 | 161 | 280.0 | Domain | LRAT | |
Tgene | HRASLS5 | chr11:63449250 | chr11:63233844 | ENST00000539221 | 3 | 6 | 135_249 | 161 | 254.0 | Domain | LRAT | |
Tgene | HRASLS5 | chr11:63449250 | chr11:63233844 | ENST00000540857 | 3 | 6 | 135_249 | 151 | 270.0 | Domain | LRAT |
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Fusion Gene Sequence for RTN3-HRASLS5 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>78557_78557_1_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000339997_HRASLS5_chr11_63233844_ENST00000301790_length(transcript)=818nt_BP=296nt GCTCGGCTGAGTCAGTCAGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTAT TTCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCA GTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGAC GAAGAGCTGCAGCTCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAG TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT CCAGCGTACAAAAAAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCTCAGATATGG CGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAA GCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTT GCCTTCTCTCAATGGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAAT >78557_78557_1_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000339997_HRASLS5_chr11_63233844_ENST00000301790_length(amino acids)=192AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR AVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALMEGAKAAGAVISA -------------------------------------------------------------- >78557_78557_2_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000339997_HRASLS5_chr11_63233844_ENST00000539221_length(transcript)=845nt_BP=296nt GCTCGGCTGAGTCAGTCAGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTAT TTCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCA GTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGAC GAAGAGCTGCAGCTCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAG TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT CCAGCGTACAAAAAAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTAGAGCACGCCCTGATGGAAGGAGCGAAGG CTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAG AGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTCTCAATGGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAAT CTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATC >78557_78557_2_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000339997_HRASLS5_chr11_63233844_ENST00000539221_length(amino acids)=166AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR -------------------------------------------------------------- >78557_78557_3_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000339997_HRASLS5_chr11_63233844_ENST00000540857_length(transcript)=2741nt_BP=296nt GCTCGGCTGAGTCAGTCAGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTAT TTCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCA GTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGAC GAAGAGCTGCAGCTCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAG TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT CCAGCGTACAAAAAAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCTCAGATATGG CGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAA GCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTT GCCTTCTCTCAATGGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAAT ATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTGTATCTCTTATGCGCCAGGCACTGTGCTAGGCAT TTCATATACGGATCTAATTTCACTCTCTTTGTAGGATGGGACCTTGCTTGTGTCTTAGGCTGACCTTGGTCTCCGATGCTTGAGTGCCAT CAGAAACATCCCAGAAACCTCTGCTTGAATATTTCCAGTAACGAAGATGTCTTTTTCCAGATGTTCTTTTTATTTAACTAAAATGTCTCT AGCTTCTTTCCATTTATGATAATCCTGCCCTTTTCGACCCACAGTGTAGCTCAGAGGAGGAGGACCTTAAGAAAAACTGAGATTCGTTAT TCAGGGCCCATGGTACCTTAATCTAGAAACACATATCCCAAGAAATATTTTCTTTTTAAAATTATACATCAACTTTATGCCTTATTGTTT AAAAATCTTCTATCAAAAGTATCATCGATAAGACAATTTATCTTGCTTTTGTACCTCATAATTACCCTAAAATGTGAAGTTTCTAGTCTC ACTGATTTCAGATGAATATTTAAAATAATTTGATAAGTTTAATCAATTGAACTCTACTGTGTGAGTGAGGGAGAGAAAGGAGTTATTTTT GTGTTTTGAAGAAAGTTGACAGGATGGAAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTGGTAGCTGAAACCACCCAAAAAAGC TAGAAAAGTGTTCTCTTATGCCTCCAGAGATACCTAGAAAATATGAAGAATGTGGAAAAGAGCAAGATGGAACCCTCAGAGTGTTTCAGA TAAGGTCTGTTGGTATCTCCATAAGCTTTTCTCCTATTTGGAGAAAATAGACTCTCACTGAAACTCTTCAATGTTTTTACCCTCCATCCT TTTCTTAGCAATCTAAACTCAATGGCCTCCTGTTCCCCAACACTGCAGTCTGGGCATCTGACTTTGTCTTCCCTCTGCACTCATTTCTGT GAATCATGACCAGGATGAAACTGATATCCCTAGTTCCTCTTCCCCATTTCTTCTCACACTCCCCTGCCTGAGAATCAGTTGAGTTCCCAA TACCTCTTCCTTCAGTCTCTATTCATTATATGGTCTAGGTTGAGACTTCCTTGGAAGCAGAACCTGAGTACCAGGAACTCATATTTTATA AAGTATATTTATTCCTTTTAGCTGCAAACTAACCCAGCCATGTTTTAGTGAATGCTTTAATCTGAAGATGACTTTGAGCTCATTGACCAT ATTAATCTTTCATCAAACAAACTGGATGTTGTTTCATTAACAAAAAACTCCTCCACACCAAGGAGTGTTTAGTAACTTCTGCACAGAGGA CTCATCCATCTCTTGCTTATGTTTGGGACAGAAAGACACTTCTCTGGCTTTTTACTGGCTTGAACCCAATGGGACAGAGACTCTCTAGAA AGTTTCAGGGCTCACATTCACTTGTTTGTCCAAAAAATATTTTTGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCCCACCTTTGCCTG AGCCCATGAGCGGTAGTCTGGGGGCTGGATGTGAGGAGTTCTGAGTTGGCTAGGAAGACACAAGGCACAATGGACATGGGGCAAAGTCCA CTTGCTGGACATTGGTCCCTTCCACTTCCAAGCTGTCCATCAGGCTGAGAGATCTGGAATGCATACCCCACACTTTGAAGATGAGGAAGG GCGAGTTTCTCAAAGTGTGTGTGTGTGTTTCTCTTTTAATCTGTAATGGTTTCTGCATTTTGAGGTAGAAACAGAAATCTCTTTTTTGAG TGGGACCACTCGGGTGCGGCTTCTTAGTCTTGTTGATATAATAAAGCACATGCCCACTCCTCATGGAGTGGAGAGGAGAAAATTCTAAGG >78557_78557_3_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000339997_HRASLS5_chr11_63233844_ENST00000540857_length(amino acids)=192AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR AVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALMEGAKAAGAVISA -------------------------------------------------------------- >78557_78557_4_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000341307_HRASLS5_chr11_63233844_ENST00000301790_length(transcript)=855nt_BP=333nt GTGCGCATGCGCGCTCGCGCTCCCGCCCTCTAGCTGCGCTCGGCTGAGTCAGTCAGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTA AAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTATTTCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCG CTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCAGTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCG GCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGCTCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTA CTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAG ATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTACAAAAAAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAG GGAACTGTGAGCACTTTGTCAATGGCCTCAGATATGGCGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTG CTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGT TACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTCTCAATGGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTA >78557_78557_4_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000341307_HRASLS5_chr11_63233844_ENST00000301790_length(amino acids)=192AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR AVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALMEGAKAAGAVISA -------------------------------------------------------------- >78557_78557_5_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000341307_HRASLS5_chr11_63233844_ENST00000539221_length(transcript)=882nt_BP=333nt GTGCGCATGCGCGCTCGCGCTCCCGCCCTCTAGCTGCGCTCGGCTGAGTCAGTCAGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTA AAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTATTTCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCG CTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCAGTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCG GCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGCTCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTA CTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAG ATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTACAAAAAAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAG GGAACTGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATA ACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTCTCAAT GGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATA >78557_78557_5_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000341307_HRASLS5_chr11_63233844_ENST00000539221_length(amino acids)=166AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR -------------------------------------------------------------- >78557_78557_6_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000341307_HRASLS5_chr11_63233844_ENST00000540857_length(transcript)=2778nt_BP=333nt GTGCGCATGCGCGCTCGCGCTCCCGCCCTCTAGCTGCGCTCGGCTGAGTCAGTCAGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTA AAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTATTTCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCG CTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCAGTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCG GCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGCTCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTA CTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAG ATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTACAAAAAAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAG GGAACTGTGAGCACTTTGTCAATGGCCTCAGATATGGCGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTG CTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGT TACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTCTCAATGGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTA CAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAG TGTGTATCTCTTATGCGCCAGGCACTGTGCTAGGCATTTCATATACGGATCTAATTTCACTCTCTTTGTAGGATGGGACCTTGCTTGTGT CTTAGGCTGACCTTGGTCTCCGATGCTTGAGTGCCATCAGAAACATCCCAGAAACCTCTGCTTGAATATTTCCAGTAACGAAGATGTCTT TTTCCAGATGTTCTTTTTATTTAACTAAAATGTCTCTAGCTTCTTTCCATTTATGATAATCCTGCCCTTTTCGACCCACAGTGTAGCTCA GAGGAGGAGGACCTTAAGAAAAACTGAGATTCGTTATTCAGGGCCCATGGTACCTTAATCTAGAAACACATATCCCAAGAAATATTTTCT TTTTAAAATTATACATCAACTTTATGCCTTATTGTTTAAAAATCTTCTATCAAAAGTATCATCGATAAGACAATTTATCTTGCTTTTGTA CCTCATAATTACCCTAAAATGTGAAGTTTCTAGTCTCACTGATTTCAGATGAATATTTAAAATAATTTGATAAGTTTAATCAATTGAACT CTACTGTGTGAGTGAGGGAGAGAAAGGAGTTATTTTTGTGTTTTGAAGAAAGTTGACAGGATGGAAGATCTGAAATTATGGCTGGGGATT GTAGTGATAGCTGGTAGCTGAAACCACCCAAAAAAGCTAGAAAAGTGTTCTCTTATGCCTCCAGAGATACCTAGAAAATATGAAGAATGT GGAAAAGAGCAAGATGGAACCCTCAGAGTGTTTCAGATAAGGTCTGTTGGTATCTCCATAAGCTTTTCTCCTATTTGGAGAAAATAGACT CTCACTGAAACTCTTCAATGTTTTTACCCTCCATCCTTTTCTTAGCAATCTAAACTCAATGGCCTCCTGTTCCCCAACACTGCAGTCTGG GCATCTGACTTTGTCTTCCCTCTGCACTCATTTCTGTGAATCATGACCAGGATGAAACTGATATCCCTAGTTCCTCTTCCCCATTTCTTC TCACACTCCCCTGCCTGAGAATCAGTTGAGTTCCCAATACCTCTTCCTTCAGTCTCTATTCATTATATGGTCTAGGTTGAGACTTCCTTG GAAGCAGAACCTGAGTACCAGGAACTCATATTTTATAAAGTATATTTATTCCTTTTAGCTGCAAACTAACCCAGCCATGTTTTAGTGAAT GCTTTAATCTGAAGATGACTTTGAGCTCATTGACCATATTAATCTTTCATCAAACAAACTGGATGTTGTTTCATTAACAAAAAACTCCTC CACACCAAGGAGTGTTTAGTAACTTCTGCACAGAGGACTCATCCATCTCTTGCTTATGTTTGGGACAGAAAGACACTTCTCTGGCTTTTT ACTGGCTTGAACCCAATGGGACAGAGACTCTCTAGAAAGTTTCAGGGCTCACATTCACTTGTTTGTCCAAAAAATATTTTTGAGTGTCTC CCAAGTGCCAAACCCTGGCTACTCCCACCTTTGCCTGAGCCCATGAGCGGTAGTCTGGGGGCTGGATGTGAGGAGTTCTGAGTTGGCTAG GAAGACACAAGGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACATTGGTCCCTTCCACTTCCAAGCTGTCCATCAGGCTGAGAGAT CTGGAATGCATACCCCACACTTTGAAGATGAGGAAGGGCGAGTTTCTCAAAGTGTGTGTGTGTGTTTCTCTTTTAATCTGTAATGGTTTC TGCATTTTGAGGTAGAAACAGAAATCTCTTTTTTGAGTGGGACCACTCGGGTGCGGCTTCTTAGTCTTGTTGATATAATAAAGCACATGC >78557_78557_6_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000341307_HRASLS5_chr11_63233844_ENST00000540857_length(amino acids)=192AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR AVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALMEGAKAAGAVISA -------------------------------------------------------------- >78557_78557_7_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000354497_HRASLS5_chr11_63233844_ENST00000301790_length(transcript)=728nt_BP=206nt TTCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCA GTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGAC GAAGAGCTGCAGCTCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAG TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT CCAGCGTACAAAAAAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCTCAGATATGG CGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAA GCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTT GCCTTCTCTCAATGGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAAT >78557_78557_7_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000354497_HRASLS5_chr11_63233844_ENST00000301790_length(amino acids)=165AA_BP=47 MAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNRAVVKYSRLEDVLHGCSWKVNNKLDGTY -------------------------------------------------------------- >78557_78557_8_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000354497_HRASLS5_chr11_63233844_ENST00000539221_length(transcript)=755nt_BP=206nt TTCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCA GTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGAC GAAGAGCTGCAGCTCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAG TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT CCAGCGTACAAAAAAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTAGAGCACGCCCTGATGGAAGGAGCGAAGG CTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAG AGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTCTCAATGGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAAT CTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATC >78557_78557_8_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000354497_HRASLS5_chr11_63233844_ENST00000539221_length(amino acids)=139AA_BP=47 MAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNRAVVKYSRLEDVLHGCSWKVNNKLDGTY -------------------------------------------------------------- >78557_78557_9_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000354497_HRASLS5_chr11_63233844_ENST00000540857_length(transcript)=2651nt_BP=206nt TTCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCA GTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGAC GAAGAGCTGCAGCTCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAG TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT CCAGCGTACAAAAAAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCTCAGATATGG CGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAA GCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTT GCCTTCTCTCAATGGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAAT ATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTGTATCTCTTATGCGCCAGGCACTGTGCTAGGCAT TTCATATACGGATCTAATTTCACTCTCTTTGTAGGATGGGACCTTGCTTGTGTCTTAGGCTGACCTTGGTCTCCGATGCTTGAGTGCCAT CAGAAACATCCCAGAAACCTCTGCTTGAATATTTCCAGTAACGAAGATGTCTTTTTCCAGATGTTCTTTTTATTTAACTAAAATGTCTCT AGCTTCTTTCCATTTATGATAATCCTGCCCTTTTCGACCCACAGTGTAGCTCAGAGGAGGAGGACCTTAAGAAAAACTGAGATTCGTTAT TCAGGGCCCATGGTACCTTAATCTAGAAACACATATCCCAAGAAATATTTTCTTTTTAAAATTATACATCAACTTTATGCCTTATTGTTT AAAAATCTTCTATCAAAAGTATCATCGATAAGACAATTTATCTTGCTTTTGTACCTCATAATTACCCTAAAATGTGAAGTTTCTAGTCTC ACTGATTTCAGATGAATATTTAAAATAATTTGATAAGTTTAATCAATTGAACTCTACTGTGTGAGTGAGGGAGAGAAAGGAGTTATTTTT GTGTTTTGAAGAAAGTTGACAGGATGGAAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTGGTAGCTGAAACCACCCAAAAAAGC TAGAAAAGTGTTCTCTTATGCCTCCAGAGATACCTAGAAAATATGAAGAATGTGGAAAAGAGCAAGATGGAACCCTCAGAGTGTTTCAGA TAAGGTCTGTTGGTATCTCCATAAGCTTTTCTCCTATTTGGAGAAAATAGACTCTCACTGAAACTCTTCAATGTTTTTACCCTCCATCCT TTTCTTAGCAATCTAAACTCAATGGCCTCCTGTTCCCCAACACTGCAGTCTGGGCATCTGACTTTGTCTTCCCTCTGCACTCATTTCTGT GAATCATGACCAGGATGAAACTGATATCCCTAGTTCCTCTTCCCCATTTCTTCTCACACTCCCCTGCCTGAGAATCAGTTGAGTTCCCAA TACCTCTTCCTTCAGTCTCTATTCATTATATGGTCTAGGTTGAGACTTCCTTGGAAGCAGAACCTGAGTACCAGGAACTCATATTTTATA AAGTATATTTATTCCTTTTAGCTGCAAACTAACCCAGCCATGTTTTAGTGAATGCTTTAATCTGAAGATGACTTTGAGCTCATTGACCAT ATTAATCTTTCATCAAACAAACTGGATGTTGTTTCATTAACAAAAAACTCCTCCACACCAAGGAGTGTTTAGTAACTTCTGCACAGAGGA CTCATCCATCTCTTGCTTATGTTTGGGACAGAAAGACACTTCTCTGGCTTTTTACTGGCTTGAACCCAATGGGACAGAGACTCTCTAGAA AGTTTCAGGGCTCACATTCACTTGTTTGTCCAAAAAATATTTTTGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCCCACCTTTGCCTG AGCCCATGAGCGGTAGTCTGGGGGCTGGATGTGAGGAGTTCTGAGTTGGCTAGGAAGACACAAGGCACAATGGACATGGGGCAAAGTCCA CTTGCTGGACATTGGTCCCTTCCACTTCCAAGCTGTCCATCAGGCTGAGAGATCTGGAATGCATACCCCACACTTTGAAGATGAGGAAGG GCGAGTTTCTCAAAGTGTGTGTGTGTGTTTCTCTTTTAATCTGTAATGGTTTCTGCATTTTGAGGTAGAAACAGAAATCTCTTTTTTGAG TGGGACCACTCGGGTGCGGCTTCTTAGTCTTGTTGATATAATAAAGCACATGCCCACTCCTCATGGAGTGGAGAGGAGAAAATTCTAAGG >78557_78557_9_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000354497_HRASLS5_chr11_63233844_ENST00000540857_length(amino acids)=165AA_BP=47 MAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNRAVVKYSRLEDVLHGCSWKVNNKLDGTY -------------------------------------------------------------- >78557_78557_10_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000356000_HRASLS5_chr11_63233844_ENST00000301790_length(transcript)=851nt_BP=329nt GCATGCGCGCTCGCGCTCCCGCCCTCTAGCTGCGCTCGGCTGAGTCAGTCAGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGG GACTTGAGCGAGCCAGTTGCCGGATTATTCTATTTCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCG CGTAGCCATGGCGGAGCCGTCGGCGGCCACTCAGTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGG CGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGCTCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTC CATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGG GACGTACCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTACAAAAAAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAA CTGTGAGCACTTTGTCAATGGCCTCAGATATGGCGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGG AGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACT GACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTCTCAATGGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTACAAT >78557_78557_10_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000356000_HRASLS5_chr11_63233844_ENST00000301790_length(amino acids)=192AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR AVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALMEGAKAAGAVISA -------------------------------------------------------------- >78557_78557_11_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000356000_HRASLS5_chr11_63233844_ENST00000539221_length(transcript)=878nt_BP=329nt GCATGCGCGCTCGCGCTCCCGCCCTCTAGCTGCGCTCGGCTGAGTCAGTCAGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGG GACTTGAGCGAGCCAGTTGCCGGATTATTCTATTTCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCG CGTAGCCATGGCGGAGCCGTCGGCGGCCACTCAGTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGG CGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGCTCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTC CATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGG GACGTACCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTACAAAAAAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAA CTGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTG CCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTCTCAATGGCT CCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACC >78557_78557_11_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000356000_HRASLS5_chr11_63233844_ENST00000539221_length(amino acids)=166AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR -------------------------------------------------------------- >78557_78557_12_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000356000_HRASLS5_chr11_63233844_ENST00000540857_length(transcript)=2774nt_BP=329nt GCATGCGCGCTCGCGCTCCCGCCCTCTAGCTGCGCTCGGCTGAGTCAGTCAGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGG GACTTGAGCGAGCCAGTTGCCGGATTATTCTATTTCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCG CGTAGCCATGGCGGAGCCGTCGGCGGCCACTCAGTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGG CGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGCTCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTC CATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGG GACGTACCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTACAAAAAAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAA CTGTGAGCACTTTGTCAATGGCCTCAGATATGGCGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGG AGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACT GACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTCTCAATGGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTACAAT GTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTG TATCTCTTATGCGCCAGGCACTGTGCTAGGCATTTCATATACGGATCTAATTTCACTCTCTTTGTAGGATGGGACCTTGCTTGTGTCTTA GGCTGACCTTGGTCTCCGATGCTTGAGTGCCATCAGAAACATCCCAGAAACCTCTGCTTGAATATTTCCAGTAACGAAGATGTCTTTTTC CAGATGTTCTTTTTATTTAACTAAAATGTCTCTAGCTTCTTTCCATTTATGATAATCCTGCCCTTTTCGACCCACAGTGTAGCTCAGAGG AGGAGGACCTTAAGAAAAACTGAGATTCGTTATTCAGGGCCCATGGTACCTTAATCTAGAAACACATATCCCAAGAAATATTTTCTTTTT AAAATTATACATCAACTTTATGCCTTATTGTTTAAAAATCTTCTATCAAAAGTATCATCGATAAGACAATTTATCTTGCTTTTGTACCTC ATAATTACCCTAAAATGTGAAGTTTCTAGTCTCACTGATTTCAGATGAATATTTAAAATAATTTGATAAGTTTAATCAATTGAACTCTAC TGTGTGAGTGAGGGAGAGAAAGGAGTTATTTTTGTGTTTTGAAGAAAGTTGACAGGATGGAAGATCTGAAATTATGGCTGGGGATTGTAG TGATAGCTGGTAGCTGAAACCACCCAAAAAAGCTAGAAAAGTGTTCTCTTATGCCTCCAGAGATACCTAGAAAATATGAAGAATGTGGAA AAGAGCAAGATGGAACCCTCAGAGTGTTTCAGATAAGGTCTGTTGGTATCTCCATAAGCTTTTCTCCTATTTGGAGAAAATAGACTCTCA CTGAAACTCTTCAATGTTTTTACCCTCCATCCTTTTCTTAGCAATCTAAACTCAATGGCCTCCTGTTCCCCAACACTGCAGTCTGGGCAT CTGACTTTGTCTTCCCTCTGCACTCATTTCTGTGAATCATGACCAGGATGAAACTGATATCCCTAGTTCCTCTTCCCCATTTCTTCTCAC ACTCCCCTGCCTGAGAATCAGTTGAGTTCCCAATACCTCTTCCTTCAGTCTCTATTCATTATATGGTCTAGGTTGAGACTTCCTTGGAAG CAGAACCTGAGTACCAGGAACTCATATTTTATAAAGTATATTTATTCCTTTTAGCTGCAAACTAACCCAGCCATGTTTTAGTGAATGCTT TAATCTGAAGATGACTTTGAGCTCATTGACCATATTAATCTTTCATCAAACAAACTGGATGTTGTTTCATTAACAAAAAACTCCTCCACA CCAAGGAGTGTTTAGTAACTTCTGCACAGAGGACTCATCCATCTCTTGCTTATGTTTGGGACAGAAAGACACTTCTCTGGCTTTTTACTG GCTTGAACCCAATGGGACAGAGACTCTCTAGAAAGTTTCAGGGCTCACATTCACTTGTTTGTCCAAAAAATATTTTTGAGTGTCTCCCAA GTGCCAAACCCTGGCTACTCCCACCTTTGCCTGAGCCCATGAGCGGTAGTCTGGGGGCTGGATGTGAGGAGTTCTGAGTTGGCTAGGAAG ACACAAGGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACATTGGTCCCTTCCACTTCCAAGCTGTCCATCAGGCTGAGAGATCTGG AATGCATACCCCACACTTTGAAGATGAGGAAGGGCGAGTTTCTCAAAGTGTGTGTGTGTGTTTCTCTTTTAATCTGTAATGGTTTCTGCA TTTTGAGGTAGAAACAGAAATCTCTTTTTTGAGTGGGACCACTCGGGTGCGGCTTCTTAGTCTTGTTGATATAATAAAGCACATGCCCAC >78557_78557_12_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000356000_HRASLS5_chr11_63233844_ENST00000540857_length(amino acids)=192AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR AVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALMEGAKAAGAVISA -------------------------------------------------------------- >78557_78557_13_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000377819_HRASLS5_chr11_63233844_ENST00000301790_length(transcript)=818nt_BP=296nt GCTCGGCTGAGTCAGTCAGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTAT TTCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCA GTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGAC GAAGAGCTGCAGCTCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAG TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT CCAGCGTACAAAAAAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCTCAGATATGG CGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAA GCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTT GCCTTCTCTCAATGGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAAT >78557_78557_13_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000377819_HRASLS5_chr11_63233844_ENST00000301790_length(amino acids)=192AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR AVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALMEGAKAAGAVISA -------------------------------------------------------------- >78557_78557_14_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000377819_HRASLS5_chr11_63233844_ENST00000539221_length(transcript)=845nt_BP=296nt GCTCGGCTGAGTCAGTCAGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTAT TTCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCA GTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGAC GAAGAGCTGCAGCTCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAG TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT CCAGCGTACAAAAAAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTAGAGCACGCCCTGATGGAAGGAGCGAAGG CTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAG AGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTCTCAATGGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAAT CTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATC >78557_78557_14_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000377819_HRASLS5_chr11_63233844_ENST00000539221_length(amino acids)=166AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR -------------------------------------------------------------- >78557_78557_15_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000377819_HRASLS5_chr11_63233844_ENST00000540857_length(transcript)=2741nt_BP=296nt GCTCGGCTGAGTCAGTCAGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTAT TTCCCCTCCCTCTCTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCA GTCCCATTCCATCTCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGAC GAAGAGCTGCAGCTCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAG TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT CCAGCGTACAAAAAAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCTCAGATATGG CGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAA GCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTT GCCTTCTCTCAATGGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAAT ATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTGTATCTCTTATGCGCCAGGCACTGTGCTAGGCAT TTCATATACGGATCTAATTTCACTCTCTTTGTAGGATGGGACCTTGCTTGTGTCTTAGGCTGACCTTGGTCTCCGATGCTTGAGTGCCAT CAGAAACATCCCAGAAACCTCTGCTTGAATATTTCCAGTAACGAAGATGTCTTTTTCCAGATGTTCTTTTTATTTAACTAAAATGTCTCT AGCTTCTTTCCATTTATGATAATCCTGCCCTTTTCGACCCACAGTGTAGCTCAGAGGAGGAGGACCTTAAGAAAAACTGAGATTCGTTAT TCAGGGCCCATGGTACCTTAATCTAGAAACACATATCCCAAGAAATATTTTCTTTTTAAAATTATACATCAACTTTATGCCTTATTGTTT AAAAATCTTCTATCAAAAGTATCATCGATAAGACAATTTATCTTGCTTTTGTACCTCATAATTACCCTAAAATGTGAAGTTTCTAGTCTC ACTGATTTCAGATGAATATTTAAAATAATTTGATAAGTTTAATCAATTGAACTCTACTGTGTGAGTGAGGGAGAGAAAGGAGTTATTTTT GTGTTTTGAAGAAAGTTGACAGGATGGAAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTGGTAGCTGAAACCACCCAAAAAAGC TAGAAAAGTGTTCTCTTATGCCTCCAGAGATACCTAGAAAATATGAAGAATGTGGAAAAGAGCAAGATGGAACCCTCAGAGTGTTTCAGA TAAGGTCTGTTGGTATCTCCATAAGCTTTTCTCCTATTTGGAGAAAATAGACTCTCACTGAAACTCTTCAATGTTTTTACCCTCCATCCT TTTCTTAGCAATCTAAACTCAATGGCCTCCTGTTCCCCAACACTGCAGTCTGGGCATCTGACTTTGTCTTCCCTCTGCACTCATTTCTGT GAATCATGACCAGGATGAAACTGATATCCCTAGTTCCTCTTCCCCATTTCTTCTCACACTCCCCTGCCTGAGAATCAGTTGAGTTCCCAA TACCTCTTCCTTCAGTCTCTATTCATTATATGGTCTAGGTTGAGACTTCCTTGGAAGCAGAACCTGAGTACCAGGAACTCATATTTTATA AAGTATATTTATTCCTTTTAGCTGCAAACTAACCCAGCCATGTTTTAGTGAATGCTTTAATCTGAAGATGACTTTGAGCTCATTGACCAT ATTAATCTTTCATCAAACAAACTGGATGTTGTTTCATTAACAAAAAACTCCTCCACACCAAGGAGTGTTTAGTAACTTCTGCACAGAGGA CTCATCCATCTCTTGCTTATGTTTGGGACAGAAAGACACTTCTCTGGCTTTTTACTGGCTTGAACCCAATGGGACAGAGACTCTCTAGAA AGTTTCAGGGCTCACATTCACTTGTTTGTCCAAAAAATATTTTTGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCCCACCTTTGCCTG AGCCCATGAGCGGTAGTCTGGGGGCTGGATGTGAGGAGTTCTGAGTTGGCTAGGAAGACACAAGGCACAATGGACATGGGGCAAAGTCCA CTTGCTGGACATTGGTCCCTTCCACTTCCAAGCTGTCCATCAGGCTGAGAGATCTGGAATGCATACCCCACACTTTGAAGATGAGGAAGG GCGAGTTTCTCAAAGTGTGTGTGTGTGTTTCTCTTTTAATCTGTAATGGTTTCTGCATTTTGAGGTAGAAACAGAAATCTCTTTTTTGAG TGGGACCACTCGGGTGCGGCTTCTTAGTCTTGTTGATATAATAAAGCACATGCCCACTCCTCATGGAGTGGAGAGGAGAAAATTCTAAGG >78557_78557_15_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000377819_HRASLS5_chr11_63233844_ENST00000540857_length(amino acids)=192AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR AVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALMEGAKAAGAVISA -------------------------------------------------------------- >78557_78557_16_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000537981_HRASLS5_chr11_63233844_ENST00000301790_length(transcript)=801nt_BP=279nt AGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTATTTCCCCTCCCTCTCTCC CGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCAGTCCCATTCCATCTCCT CGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGCTCCT CCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCGTCTGGAGGATGTGC TGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTACAAAAAAGA TGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCTCAGATATGGCGTACCCCGGAGCCAGC AGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTG CCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTCTCAATGGCT >78557_78557_16_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000537981_HRASLS5_chr11_63233844_ENST00000301790_length(amino acids)=192AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR AVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALMEGAKAAGAVISA -------------------------------------------------------------- >78557_78557_17_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000537981_HRASLS5_chr11_63233844_ENST00000539221_length(transcript)=828nt_BP=279nt AGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTATTTCCCCTCCCTCTCTCC CGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCAGTCCCATTCCATCTCCT CGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGCTCCT CCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCGTCTGGAGGATGTGC TGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTACAAAAAAGA TGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTATT TCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCA AAAAGAACATGCTTCCTTCCCTTGCCTTCTCTCAATGGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATT ACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTGTATCTCTTAT >78557_78557_17_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000537981_HRASLS5_chr11_63233844_ENST00000539221_length(amino acids)=166AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR -------------------------------------------------------------- >78557_78557_18_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000537981_HRASLS5_chr11_63233844_ENST00000540857_length(transcript)=2724nt_BP=279nt AGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTATTTCCCCTCCCTCTCTCC CGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCAGTCCCATTCCATCTCCT CGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGCTCCT CCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCGTCTGGAGGATGTGC TGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTACAAAAAAGA TGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCTCAGATATGGCGTACCCCGGAGCCAGC AGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTG CCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTCTCAATGGCT CCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACC CACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTGTATCTCTTATGCGCCAGGCACTGTGCTAGGCATTTCATATACGGATCTAA TTTCACTCTCTTTGTAGGATGGGACCTTGCTTGTGTCTTAGGCTGACCTTGGTCTCCGATGCTTGAGTGCCATCAGAAACATCCCAGAAA CCTCTGCTTGAATATTTCCAGTAACGAAGATGTCTTTTTCCAGATGTTCTTTTTATTTAACTAAAATGTCTCTAGCTTCTTTCCATTTAT GATAATCCTGCCCTTTTCGACCCACAGTGTAGCTCAGAGGAGGAGGACCTTAAGAAAAACTGAGATTCGTTATTCAGGGCCCATGGTACC TTAATCTAGAAACACATATCCCAAGAAATATTTTCTTTTTAAAATTATACATCAACTTTATGCCTTATTGTTTAAAAATCTTCTATCAAA AGTATCATCGATAAGACAATTTATCTTGCTTTTGTACCTCATAATTACCCTAAAATGTGAAGTTTCTAGTCTCACTGATTTCAGATGAAT ATTTAAAATAATTTGATAAGTTTAATCAATTGAACTCTACTGTGTGAGTGAGGGAGAGAAAGGAGTTATTTTTGTGTTTTGAAGAAAGTT GACAGGATGGAAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTGGTAGCTGAAACCACCCAAAAAAGCTAGAAAAGTGTTCTCTT ATGCCTCCAGAGATACCTAGAAAATATGAAGAATGTGGAAAAGAGCAAGATGGAACCCTCAGAGTGTTTCAGATAAGGTCTGTTGGTATC TCCATAAGCTTTTCTCCTATTTGGAGAAAATAGACTCTCACTGAAACTCTTCAATGTTTTTACCCTCCATCCTTTTCTTAGCAATCTAAA CTCAATGGCCTCCTGTTCCCCAACACTGCAGTCTGGGCATCTGACTTTGTCTTCCCTCTGCACTCATTTCTGTGAATCATGACCAGGATG AAACTGATATCCCTAGTTCCTCTTCCCCATTTCTTCTCACACTCCCCTGCCTGAGAATCAGTTGAGTTCCCAATACCTCTTCCTTCAGTC TCTATTCATTATATGGTCTAGGTTGAGACTTCCTTGGAAGCAGAACCTGAGTACCAGGAACTCATATTTTATAAAGTATATTTATTCCTT TTAGCTGCAAACTAACCCAGCCATGTTTTAGTGAATGCTTTAATCTGAAGATGACTTTGAGCTCATTGACCATATTAATCTTTCATCAAA CAAACTGGATGTTGTTTCATTAACAAAAAACTCCTCCACACCAAGGAGTGTTTAGTAACTTCTGCACAGAGGACTCATCCATCTCTTGCT TATGTTTGGGACAGAAAGACACTTCTCTGGCTTTTTACTGGCTTGAACCCAATGGGACAGAGACTCTCTAGAAAGTTTCAGGGCTCACAT TCACTTGTTTGTCCAAAAAATATTTTTGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCCCACCTTTGCCTGAGCCCATGAGCGGTAGT CTGGGGGCTGGATGTGAGGAGTTCTGAGTTGGCTAGGAAGACACAAGGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACATTGGTC CCTTCCACTTCCAAGCTGTCCATCAGGCTGAGAGATCTGGAATGCATACCCCACACTTTGAAGATGAGGAAGGGCGAGTTTCTCAAAGTG TGTGTGTGTGTTTCTCTTTTAATCTGTAATGGTTTCTGCATTTTGAGGTAGAAACAGAAATCTCTTTTTTGAGTGGGACCACTCGGGTGC GGCTTCTTAGTCTTGTTGATATAATAAAGCACATGCCCACTCCTCATGGAGTGGAGAGGAGAAAATTCTAAGGGAACGTACTCTGAATGC >78557_78557_18_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000537981_HRASLS5_chr11_63233844_ENST00000540857_length(amino acids)=192AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR AVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALMEGAKAAGAVISA -------------------------------------------------------------- >78557_78557_19_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000540798_HRASLS5_chr11_63233844_ENST00000301790_length(transcript)=805nt_BP=283nt AGTCAGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTATTTCCCCTCCCTCT CTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCAGTCCCATTCCATC TCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGC TCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCGTCTGGAGGAT GTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTACAAAA AAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCTCAGATATGGCGTACCCCGGAGC CAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATA ACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTCTCAAT >78557_78557_19_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000540798_HRASLS5_chr11_63233844_ENST00000301790_length(amino acids)=192AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR AVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALMEGAKAAGAVISA -------------------------------------------------------------- >78557_78557_20_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000540798_HRASLS5_chr11_63233844_ENST00000539221_length(transcript)=832nt_BP=283nt AGTCAGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTATTTCCCCTCCCTCT CTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCAGTCCCATTCCATC TCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGC TCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCGTCTGGAGGAT GTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTACAAAA AAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGT TATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACA AGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTCTCAATGGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCC AATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTGTATCTC >78557_78557_20_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000540798_HRASLS5_chr11_63233844_ENST00000539221_length(amino acids)=166AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR -------------------------------------------------------------- >78557_78557_21_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000540798_HRASLS5_chr11_63233844_ENST00000540857_length(transcript)=2728nt_BP=283nt AGTCAGTCTGTCGGAGTCTGTCCTCGGAGCAGGCGGAGTAAAGGGACTTGAGCGAGCCAGTTGCCGGATTATTCTATTTCCCCTCCCTCT CTCCCGCCCCGTATCTCTTTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCGTCGGCGGCCACTCAGTCCCATTCCATC TCCTCGTCGTCCTTCGGAGCCGAGCCGTCCGCGCCCGGCGGCGGCGGGAGCCCAGGAGCCTGCCCCGCCCTGGGGACGAAGAGCTGCAGC TCCTCCTGTGCGGGTGAGGAGTTTGAGGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCGTCTGGAGGAT GTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTACAAAA AAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCTCAGATATGGCGTACCCCGGAGC CAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATA ACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTCTCAAT GGCTCCGATTAAGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATA GACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTGTATCTCTTATGCGCCAGGCACTGTGCTAGGCATTTCATATACGGAT CTAATTTCACTCTCTTTGTAGGATGGGACCTTGCTTGTGTCTTAGGCTGACCTTGGTCTCCGATGCTTGAGTGCCATCAGAAACATCCCA GAAACCTCTGCTTGAATATTTCCAGTAACGAAGATGTCTTTTTCCAGATGTTCTTTTTATTTAACTAAAATGTCTCTAGCTTCTTTCCAT TTATGATAATCCTGCCCTTTTCGACCCACAGTGTAGCTCAGAGGAGGAGGACCTTAAGAAAAACTGAGATTCGTTATTCAGGGCCCATGG TACCTTAATCTAGAAACACATATCCCAAGAAATATTTTCTTTTTAAAATTATACATCAACTTTATGCCTTATTGTTTAAAAATCTTCTAT CAAAAGTATCATCGATAAGACAATTTATCTTGCTTTTGTACCTCATAATTACCCTAAAATGTGAAGTTTCTAGTCTCACTGATTTCAGAT GAATATTTAAAATAATTTGATAAGTTTAATCAATTGAACTCTACTGTGTGAGTGAGGGAGAGAAAGGAGTTATTTTTGTGTTTTGAAGAA AGTTGACAGGATGGAAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTGGTAGCTGAAACCACCCAAAAAAGCTAGAAAAGTGTTC TCTTATGCCTCCAGAGATACCTAGAAAATATGAAGAATGTGGAAAAGAGCAAGATGGAACCCTCAGAGTGTTTCAGATAAGGTCTGTTGG TATCTCCATAAGCTTTTCTCCTATTTGGAGAAAATAGACTCTCACTGAAACTCTTCAATGTTTTTACCCTCCATCCTTTTCTTAGCAATC TAAACTCAATGGCCTCCTGTTCCCCAACACTGCAGTCTGGGCATCTGACTTTGTCTTCCCTCTGCACTCATTTCTGTGAATCATGACCAG GATGAAACTGATATCCCTAGTTCCTCTTCCCCATTTCTTCTCACACTCCCCTGCCTGAGAATCAGTTGAGTTCCCAATACCTCTTCCTTC AGTCTCTATTCATTATATGGTCTAGGTTGAGACTTCCTTGGAAGCAGAACCTGAGTACCAGGAACTCATATTTTATAAAGTATATTTATT CCTTTTAGCTGCAAACTAACCCAGCCATGTTTTAGTGAATGCTTTAATCTGAAGATGACTTTGAGCTCATTGACCATATTAATCTTTCAT CAAACAAACTGGATGTTGTTTCATTAACAAAAAACTCCTCCACACCAAGGAGTGTTTAGTAACTTCTGCACAGAGGACTCATCCATCTCT TGCTTATGTTTGGGACAGAAAGACACTTCTCTGGCTTTTTACTGGCTTGAACCCAATGGGACAGAGACTCTCTAGAAAGTTTCAGGGCTC ACATTCACTTGTTTGTCCAAAAAATATTTTTGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCCCACCTTTGCCTGAGCCCATGAGCGG TAGTCTGGGGGCTGGATGTGAGGAGTTCTGAGTTGGCTAGGAAGACACAAGGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACATT GGTCCCTTCCACTTCCAAGCTGTCCATCAGGCTGAGAGATCTGGAATGCATACCCCACACTTTGAAGATGAGGAAGGGCGAGTTTCTCAA AGTGTGTGTGTGTGTTTCTCTTTTAATCTGTAATGGTTTCTGCATTTTGAGGTAGAAACAGAAATCTCTTTTTTGAGTGGGACCACTCGG GTGCGGCTTCTTAGTCTTGTTGATATAATAAAGCACATGCCCACTCCTCATGGAGTGGAGAGGAGAAAATTCTAAGGGAACGTACTCTGA >78557_78557_21_RTN3-HRASLS5_RTN3_chr11_63449250_ENST00000540798_HRASLS5_chr11_63233844_ENST00000540857_length(amino acids)=192AA_BP=74 MPDYSISPPSLPPRISFHPSPTLARVAMAEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAGEEFEVGSITSIFSNR AVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALMEGAKAAGAVISA -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for RTN3-HRASLS5 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000339997 | + | 1 | 8 | 1000_1002 | 47.333333333333336 | 1014.0 | BACE1 |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000341307 | + | 1 | 6 | 1000_1002 | 47.333333333333336 | 242.0 | BACE1 |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000354497 | + | 1 | 4 | 1000_1002 | 47.333333333333336 | 215.0 | BACE1 |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000356000 | + | 1 | 8 | 1000_1002 | 47.333333333333336 | 256.0 | BACE1 |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000377819 | + | 1 | 9 | 1000_1002 | 47.333333333333336 | 1033.0 | BACE1 |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000537981 | + | 1 | 7 | 1000_1002 | 47.333333333333336 | 237.0 | BACE1 |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000540798 | + | 1 | 8 | 1000_1002 | 47.333333333333336 | 921.0 | BACE1 |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000339997 | + | 1 | 8 | 987_1032 | 47.333333333333336 | 1014.0 | FADD |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000341307 | + | 1 | 6 | 987_1032 | 47.333333333333336 | 242.0 | FADD |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000354497 | + | 1 | 4 | 987_1032 | 47.333333333333336 | 215.0 | FADD |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000356000 | + | 1 | 8 | 987_1032 | 47.333333333333336 | 256.0 | FADD |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000377819 | + | 1 | 9 | 987_1032 | 47.333333333333336 | 1033.0 | FADD |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000537981 | + | 1 | 7 | 987_1032 | 47.333333333333336 | 237.0 | FADD |
Hgene | RTN3 | chr11:63449250 | chr11:63233844 | ENST00000540798 | + | 1 | 8 | 987_1032 | 47.333333333333336 | 921.0 | FADD |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for RTN3-HRASLS5 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for RTN3-HRASLS5 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |