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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:SCARB1-SFSWAP (FusionGDB2 ID:79530) |
Fusion Gene Summary for SCARB1-SFSWAP |
Fusion gene summary |
Fusion gene information | Fusion gene name: SCARB1-SFSWAP | Fusion gene ID: 79530 | Hgene | Tgene | Gene symbol | SCARB1 | SFSWAP | Gene ID | 949 | 6433 |
Gene name | scavenger receptor class B member 1 | splicing factor SWAP | |
Synonyms | CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 | SFRS8|SWAP | |
Cytomap | 12q24.31 | 12q24.33 | |
Type of gene | protein-coding | protein-coding | |
Description | scavenger receptor class B member 1CD36 and LIMPII analogous 1CD36 antigen (collagen type I receptor, thrombospondin receptor)-like 1scavenger receptor class B type III | splicing factor, suppressor of white-apricot homologsplicing factor SWAP homologsplicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot homolog, Drosophila)splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot, Drosophila ho | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000261693, ENST00000339570, ENST00000376788, ENST00000415380, ENST00000546215, ENST00000535005, ENST00000540495, ENST00000541205, ENST00000544327, | ENST00000539506, ENST00000261674, ENST00000541286, | |
Fusion gene scores | * DoF score | 11 X 8 X 8=704 | 9 X 13 X 9=1053 |
# samples | 14 | 19 | |
** MAII score | log2(14/704*10)=-2.33014860169233 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(19/1053*10)=-2.47043411269477 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: SCARB1 [Title/Abstract] AND SFSWAP [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | SCARB1(125348141)-SFSWAP(132209950), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | SCARB1 | GO:0010886 | positive regulation of cholesterol storage | 9211901 |
Hgene | SCARB1 | GO:0015920 | lipopolysaccharide transport | 12651854 |
Hgene | SCARB1 | GO:0032497 | detection of lipopolysaccharide | 12651854 |
Hgene | SCARB1 | GO:0034384 | high-density lipoprotein particle clearance | 9211901 |
Hgene | SCARB1 | GO:0043654 | recognition of apoptotic cell | 9211901 |
Hgene | SCARB1 | GO:0051000 | positive regulation of nitric-oxide synthase activity | 11792700 |
Fusion gene breakpoints across SCARB1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across SFSWAP (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | GBM | TCGA-06-0882-01A | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
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Fusion Gene ORF analysis for SCARB1-SFSWAP |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000261693 | ENST00000539506 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
5CDS-intron | ENST00000339570 | ENST00000539506 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
5CDS-intron | ENST00000376788 | ENST00000539506 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
5CDS-intron | ENST00000415380 | ENST00000539506 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
5CDS-intron | ENST00000546215 | ENST00000539506 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
In-frame | ENST00000261693 | ENST00000261674 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
In-frame | ENST00000261693 | ENST00000541286 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
In-frame | ENST00000339570 | ENST00000261674 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
In-frame | ENST00000339570 | ENST00000541286 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
In-frame | ENST00000376788 | ENST00000261674 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
In-frame | ENST00000376788 | ENST00000541286 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
In-frame | ENST00000415380 | ENST00000261674 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
In-frame | ENST00000415380 | ENST00000541286 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
In-frame | ENST00000546215 | ENST00000261674 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
In-frame | ENST00000546215 | ENST00000541286 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
intron-3CDS | ENST00000535005 | ENST00000261674 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
intron-3CDS | ENST00000535005 | ENST00000541286 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
intron-3CDS | ENST00000540495 | ENST00000261674 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
intron-3CDS | ENST00000540495 | ENST00000541286 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
intron-3CDS | ENST00000541205 | ENST00000261674 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
intron-3CDS | ENST00000541205 | ENST00000541286 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
intron-3CDS | ENST00000544327 | ENST00000261674 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
intron-3CDS | ENST00000544327 | ENST00000541286 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
intron-intron | ENST00000535005 | ENST00000539506 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
intron-intron | ENST00000540495 | ENST00000539506 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
intron-intron | ENST00000541205 | ENST00000539506 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
intron-intron | ENST00000544327 | ENST00000539506 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000339570 | SCARB1 | chr12 | 125348141 | - | ENST00000261674 | SFSWAP | chr12 | 132209950 | + | 2822 | 323 | 32 | 2572 | 846 |
ENST00000339570 | SCARB1 | chr12 | 125348141 | - | ENST00000541286 | SFSWAP | chr12 | 132209950 | + | 2843 | 323 | 32 | 2728 | 898 |
ENST00000415380 | SCARB1 | chr12 | 125348141 | - | ENST00000261674 | SFSWAP | chr12 | 132209950 | + | 2751 | 252 | 24 | 2501 | 825 |
ENST00000415380 | SCARB1 | chr12 | 125348141 | - | ENST00000541286 | SFSWAP | chr12 | 132209950 | + | 2772 | 252 | 24 | 2657 | 877 |
ENST00000261693 | SCARB1 | chr12 | 125348141 | - | ENST00000261674 | SFSWAP | chr12 | 132209950 | + | 2752 | 253 | 25 | 2502 | 825 |
ENST00000261693 | SCARB1 | chr12 | 125348141 | - | ENST00000541286 | SFSWAP | chr12 | 132209950 | + | 2773 | 253 | 25 | 2658 | 877 |
ENST00000376788 | SCARB1 | chr12 | 125348141 | - | ENST00000261674 | SFSWAP | chr12 | 132209950 | + | 2752 | 253 | 25 | 2502 | 825 |
ENST00000376788 | SCARB1 | chr12 | 125348141 | - | ENST00000541286 | SFSWAP | chr12 | 132209950 | + | 2773 | 253 | 25 | 2658 | 877 |
ENST00000546215 | SCARB1 | chr12 | 125348141 | - | ENST00000261674 | SFSWAP | chr12 | 132209950 | + | 2688 | 189 | 12 | 2438 | 808 |
ENST00000546215 | SCARB1 | chr12 | 125348141 | - | ENST00000541286 | SFSWAP | chr12 | 132209950 | + | 2709 | 189 | 12 | 2594 | 860 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000339570 | ENST00000261674 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + | 0.008769247 | 0.9912307 |
ENST00000339570 | ENST00000541286 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + | 0.009476305 | 0.99052364 |
ENST00000415380 | ENST00000261674 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + | 0.008313852 | 0.99168617 |
ENST00000415380 | ENST00000541286 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + | 0.009093554 | 0.9909065 |
ENST00000261693 | ENST00000261674 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + | 0.008248876 | 0.99175113 |
ENST00000261693 | ENST00000541286 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + | 0.009003161 | 0.99099684 |
ENST00000376788 | ENST00000261674 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + | 0.008248876 | 0.99175113 |
ENST00000376788 | ENST00000541286 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + | 0.009003161 | 0.99099684 |
ENST00000546215 | ENST00000261674 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + | 0.008428333 | 0.99157166 |
ENST00000546215 | ENST00000541286 | SCARB1 | chr12 | 125348141 | - | SFSWAP | chr12 | 132209950 | + | 0.009448046 | 0.99055195 |
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Fusion Genomic Features for SCARB1-SFSWAP |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
SCARB1 | chr12 | 125348140 | - | SFSWAP | chr12 | 132209949 | + | 7.71E-10 | 1 |
SCARB1 | chr12 | 125348140 | - | SFSWAP | chr12 | 132209949 | + | 7.71E-10 | 1 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for SCARB1-SFSWAP |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr12:125348141/chr12:132209950) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | SCARB1 | chr12:125348141 | chr12:132209950 | ENST00000261693 | - | 1 | 13 | 1_11 | 42 | 734.0 | Topological domain | Cytoplasmic |
Hgene | SCARB1 | chr12:125348141 | chr12:132209950 | ENST00000376788 | - | 1 | 11 | 1_11 | 42 | 616.3333333333334 | Topological domain | Cytoplasmic |
Hgene | SCARB1 | chr12:125348141 | chr12:132209950 | ENST00000415380 | - | 1 | 12 | 1_11 | 42 | 553.0 | Topological domain | Cytoplasmic |
Hgene | SCARB1 | chr12:125348141 | chr12:132209950 | ENST00000261693 | - | 1 | 13 | 12_32 | 42 | 734.0 | Transmembrane | Helical |
Hgene | SCARB1 | chr12:125348141 | chr12:132209950 | ENST00000376788 | - | 1 | 11 | 12_32 | 42 | 616.3333333333334 | Transmembrane | Helical |
Hgene | SCARB1 | chr12:125348141 | chr12:132209950 | ENST00000415380 | - | 1 | 12 | 12_32 | 42 | 553.0 | Transmembrane | Helical |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000261674 | 3 | 18 | 287_290 | 202 | 952.0 | Compositional bias | Note=Poly-Asp | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000261674 | 3 | 18 | 382_385 | 202 | 952.0 | Compositional bias | Note=Poly-Pro | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000261674 | 3 | 18 | 413_416 | 202 | 952.0 | Compositional bias | Note=Poly-Pro | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000261674 | 3 | 18 | 420_424 | 202 | 952.0 | Compositional bias | Note=Poly-Pro | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000261674 | 3 | 18 | 434_440 | 202 | 952.0 | Compositional bias | Note=Poly-Thr | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000261674 | 3 | 18 | 451_454 | 202 | 952.0 | Compositional bias | Note=Poly-Pro | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000261674 | 3 | 18 | 616_619 | 202 | 952.0 | Compositional bias | Note=Poly-Ser | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000261674 | 3 | 18 | 660_663 | 202 | 952.0 | Compositional bias | Note=Poly-Ala | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000261674 | 3 | 18 | 754_763 | 202 | 952.0 | Compositional bias | Note=Poly-Lys | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000261674 | 3 | 18 | 789_951 | 202 | 952.0 | Compositional bias | Note=Arg/Ser-rich (RS domain) | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000261674 | 3 | 18 | 850_853 | 202 | 952.0 | Compositional bias | Note=Poly-Lys | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000541286 | 3 | 19 | 287_290 | 202 | 1004.0 | Compositional bias | Note=Poly-Asp | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000541286 | 3 | 19 | 382_385 | 202 | 1004.0 | Compositional bias | Note=Poly-Pro | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000541286 | 3 | 19 | 413_416 | 202 | 1004.0 | Compositional bias | Note=Poly-Pro | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000541286 | 3 | 19 | 420_424 | 202 | 1004.0 | Compositional bias | Note=Poly-Pro | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000541286 | 3 | 19 | 434_440 | 202 | 1004.0 | Compositional bias | Note=Poly-Thr | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000541286 | 3 | 19 | 451_454 | 202 | 1004.0 | Compositional bias | Note=Poly-Pro | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000541286 | 3 | 19 | 616_619 | 202 | 1004.0 | Compositional bias | Note=Poly-Ser | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000541286 | 3 | 19 | 660_663 | 202 | 1004.0 | Compositional bias | Note=Poly-Ala | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000541286 | 3 | 19 | 754_763 | 202 | 1004.0 | Compositional bias | Note=Poly-Lys | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000541286 | 3 | 19 | 789_951 | 202 | 1004.0 | Compositional bias | Note=Arg/Ser-rich (RS domain) | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000541286 | 3 | 19 | 850_853 | 202 | 1004.0 | Compositional bias | Note=Poly-Lys | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000261674 | 3 | 18 | 211_253 | 202 | 952.0 | Repeat | Note=SURP motif 1 | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000261674 | 3 | 18 | 459_499 | 202 | 952.0 | Repeat | Note=SURP motif 2 | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000541286 | 3 | 19 | 211_253 | 202 | 1004.0 | Repeat | Note=SURP motif 1 | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000541286 | 3 | 19 | 459_499 | 202 | 1004.0 | Repeat | Note=SURP motif 2 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | SCARB1 | chr12:125348141 | chr12:132209950 | ENST00000261693 | - | 1 | 13 | 33_443 | 42 | 734.0 | Topological domain | Extracellular |
Hgene | SCARB1 | chr12:125348141 | chr12:132209950 | ENST00000261693 | - | 1 | 13 | 465_552 | 42 | 734.0 | Topological domain | Cytoplasmic |
Hgene | SCARB1 | chr12:125348141 | chr12:132209950 | ENST00000376788 | - | 1 | 11 | 33_443 | 42 | 616.3333333333334 | Topological domain | Extracellular |
Hgene | SCARB1 | chr12:125348141 | chr12:132209950 | ENST00000376788 | - | 1 | 11 | 465_552 | 42 | 616.3333333333334 | Topological domain | Cytoplasmic |
Hgene | SCARB1 | chr12:125348141 | chr12:132209950 | ENST00000415380 | - | 1 | 12 | 33_443 | 42 | 553.0 | Topological domain | Extracellular |
Hgene | SCARB1 | chr12:125348141 | chr12:132209950 | ENST00000415380 | - | 1 | 12 | 465_552 | 42 | 553.0 | Topological domain | Cytoplasmic |
Hgene | SCARB1 | chr12:125348141 | chr12:132209950 | ENST00000261693 | - | 1 | 13 | 444_464 | 42 | 734.0 | Transmembrane | Helical |
Hgene | SCARB1 | chr12:125348141 | chr12:132209950 | ENST00000376788 | - | 1 | 11 | 444_464 | 42 | 616.3333333333334 | Transmembrane | Helical |
Hgene | SCARB1 | chr12:125348141 | chr12:132209950 | ENST00000415380 | - | 1 | 12 | 444_464 | 42 | 553.0 | Transmembrane | Helical |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000261674 | 3 | 18 | 165_168 | 202 | 952.0 | Compositional bias | Note=Poly-Glu | |
Tgene | SFSWAP | chr12:125348141 | chr12:132209950 | ENST00000541286 | 3 | 19 | 165_168 | 202 | 1004.0 | Compositional bias | Note=Poly-Glu |
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Fusion Gene Sequence for SCARB1-SFSWAP |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>79530_79530_1_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000261693_SFSWAP_chr12_132209950_ENST00000261674_length(transcript)=2752nt_BP=253nt CCCGGATCCACCGTGCCTCTGCGGCCTGCGTGCCCGGAGTCCCCGCCTGTGTCGTCTCTGTCGCCGTCCCCGTCTCCTGCCAGGCGCGGA GCCCTGCGAGCCGCGGGTGGGCCCCAGGCGCGCAGACATGGGCTGCTCCGCCAAAGCGCGCTGGGCTGCCGGGGCGCTGGGCGTCGCGGG GCTACTGTGCGCTGTGCTGGGCGCTGTCATGATCGTGATGGTGCCGTCGCTCATCAAGCAGCAGGTCCTTAAGCCACCAACCGCTAAAAT GCACGCCATCATCGAGCGCACGGCCAGCTTCGTGTGCAGGCAGGGAGCACAGTTTGAGATCATGCTGAAGGCCAAGCAGGCCCGGAACTC CCAGTTTGACTTTCTGCGCTTCGACCACTACCTCAACCCCTACTATAAGTTCATCCAGAAAGCCATGAAAGAGGGACGCTACACTGTCCT GGCAGAAAACAAAAGTGACGAGAAAAAAAAATCAGGAGTCAGCTCTGACAATGAAGATGATGATGATGAAGAAGATGGGAATTACCTTCA TCCCTCTCTCTTTGCCTCCAAGAAGTGTAACCGCCTTGAAGAGCTGATGAAGCCCTTGAAGGTAGTGGACCCAGATCATCCCCTCGCAGC ACTTGTTCGTAAGGCACAGGCTGACAGTTCCACTCCCACCCCACACAACGCAGACGGTGCGCCTGTGCAGCCCTCCCAGGTGGAGTACAC GGCAGACTCGACCGTGGCAGCCATGTATTACAGCTACTACATGCTACCGGACGGCACTTACTGCCTGGCGCCGCCCCCTCCCGGAATCGA CGTGACTACTTACTACAGCACCCTTCCTGCTGGCGTGACCGTGTCTAACTCCCCTGGAGTGACGACCACCGCCCCACCACCTCCTGGGAC CACACCACTACCGCCCCCAACCACAGCAGAGACTAGCAGCGGGGCCACCTCCACAACCACCACCACAAGTGCACTTGCCCCCGTGGCCGC CATCATCCCCCCGCCCCCCGACGTCCAGCCCGTGATTGACAAGCTGGCCGAGTATGTCGCCAGGAACGGCCTGAAGTTCGAGACCAGTGT TCGTGCCAAGAATGATCAAAGATTTGAGTTCCTGCAGCCGTGGCACCAGTATAATGCTTATTATGAGTTTAAGAAGCAGTTCTTCCTCCA GAAAGAAGGGGGCGATAGCATGCAGGCTGTGTCTGCACCAGAAGAGGCTCCCACAGACTCTGCTCCCGAGAAGCCAAGTGATGCTGGGGA GGATGGCGCGCCTGAAGACGCAGCCGAGGTGGGAGCACGGGCAGGCTCAGGCGGGAAGAAGGAGGCATCGTCCAGTAAGACCGTCCCGGA CGGGAAGCTGGTGAAAGCTTCCTTTGCTCCAATAAGCTTTGCAATCAAGGCCAAAGAAAATGATCTGCTTCCCCTGGAAAAAAATCGTGT TAAGCTAGATGATGACAGTGATGATGATGAAGAAAGCAAAGAAGGCCAAGAAAGTTCTAGTAGTGCTGCAAACACTAACCCAGCAGTTGC CCCACCCTGTGTAGTTGTTGAGGAGAAGAAGCCTCAACTTACCCAGGAGGAGCTAGAAGCAAAGCAAGCAAAGCAAAAGCTGGAAGATCG CCTCGCAGCTGCTGCCCGGGAAAAGCTGGCCCAGGCGTCTAAGGAGTCAAAAGAGAAACAGCTTCAAGCAGAACGTAAAAGGAAAGCGGC GTTATTTTTACAGACCCTCAAAAATCCTCTGCCGGAAGCAGAAGCTGGGAAAATTGAGGAGAGTCCTTTCAGTGTCGAGGAATCCAGCAC TACGCCCTGCCCTCTACTGACTGGAGGCAGGCCTCTGCCTACTTTAGAAGTTAAACCACCCGATAGGCCTTCGAGCAAAAGCAAAGATCC ACCGAGAGAAGAAGAGAAAGAAAAGAAAAAGAAAAAGCACAAAAAAAGATCTCGAACAAGATCACGTTCTCCCAAGTACCATTCGTCATC CAAGTCCAGGTCTAGATCACACTCAAAAGCAAAGCATTCTCTTCCCAGTGCCTATCGGACAGTGCGGCGGTCGAGGTCCCGCTCCCGGTC CCCTCGGAGGAGAGCCCACTCCCCTGAGAGACGGAGGGAAGAGAGGAGTGTGCCCACTGCCTACCGCGTGAGCCGCAGCCCTGGGGCCAG TAGGAAGCGGACCCGCTCCAGAAGTCCCCACGAGAAGAAGAAGAAGAGGCGGTCCCGGTCGCGGACCAAGTCCAAGGCCAGGTCTCAGTC GGTGTCACCCAGCAAGCAGGCAGCGCCCCGGCCCGCGGCCCCCGCGGCCCACTCGGCGCACTCAGCCAGCGTCTCCCCTGTGGAGAGTCG GGGCTCCAGCCAGGAGCGCTCCAGGGGAGTCTCTCAGGAAAAAGAAGCCCAGATCTCTTCAGCAATCGTTTCTTCCGTGCAGAGCAAAAT CACTCAGGATCTCATGGCCAAAGTCAGAGCGATGCTTGCAGCTTCCAAAAACCTGCAAACCAGCGCTTCCTGAGACGGGGCCAGCGGAGG CAGAGCCGGGAGGCTGCGTGGGCTTCTGGGCAGGCTCACGCAGACGCCGGCCACACCATCCACCTGGCCGCCTCCATGGACCCTTGGTGG CTTTTGTAAATTAATTTTTGATGACATTTTGAGTTTTAAGATTTCTGACCAGCAGTCTCTTACCTGTATATTTGTAAATATATCATGTTT >79530_79530_1_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000261693_SFSWAP_chr12_132209950_ENST00000261674_length(amino acids)=825AA_BP=76 MRARSPRLCRLCRRPRLLPGAEPCEPRVGPRRADMGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKPPTAKMHAIIERTA SFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAENKSDEKKKSGVSSDNEDDDDEEDGNYLHPSLFASKK CNRLEELMKPLKVVDPDHPLAALVRKAQADSSTPTPHNADGAPVQPSQVEYTADSTVAAMYYSYYMLPDGTYCLAPPPPGIDVTTYYSTL PAGVTVSNSPGVTTTAPPPPGTTPLPPPTTAETSSGATSTTTTTSALAPVAAIIPPPPDVQPVIDKLAEYVARNGLKFETSVRAKNDQRF EFLQPWHQYNAYYEFKKQFFLQKEGGDSMQAVSAPEEAPTDSAPEKPSDAGEDGAPEDAAEVGARAGSGGKKEASSSKTVPDGKLVKASF APISFAIKAKENDLLPLEKNRVKLDDDSDDDEESKEGQESSSSAANTNPAVAPPCVVVEEKKPQLTQEELEAKQAKQKLEDRLAAAAREK LAQASKESKEKQLQAERKRKAALFLQTLKNPLPEAEAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPREEEKEK KKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPRRRAHSPERRREERSVPTAYRVSRSPGASRKRTRSRS PHEKKKKRRSRSRTKSKARSQSVSPSKQAAPRPAAPAAHSAHSASVSPVESRGSSQERSRGVSQEKEAQISSAIVSSVQSKITQDLMAKV -------------------------------------------------------------- >79530_79530_2_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000261693_SFSWAP_chr12_132209950_ENST00000541286_length(transcript)=2773nt_BP=253nt CCCGGATCCACCGTGCCTCTGCGGCCTGCGTGCCCGGAGTCCCCGCCTGTGTCGTCTCTGTCGCCGTCCCCGTCTCCTGCCAGGCGCGGA GCCCTGCGAGCCGCGGGTGGGCCCCAGGCGCGCAGACATGGGCTGCTCCGCCAAAGCGCGCTGGGCTGCCGGGGCGCTGGGCGTCGCGGG GCTACTGTGCGCTGTGCTGGGCGCTGTCATGATCGTGATGGTGCCGTCGCTCATCAAGCAGCAGGTCCTTAAGCCACCAACCGCTAAAAT GCACGCCATCATCGAGCGCACGGCCAGCTTCGTGTGCAGGCAGGGAGCACAGTTTGAGATCATGCTGAAGGCCAAGCAGGCCCGGAACTC CCAGTTTGACTTTCTGCGCTTCGACCACTACCTCAACCCCTACTATAAGTTCATCCAGAAAGCCATGAAAGAGGGACGCTACACTGTCCT GGCAGAAAACAAAAGTGACGAGAAAAAAAAATCAGGAGTCAGCTCTGACAATGAAGATGATGATGATGAAGAAGATGGGAATTACCTTCA TCCCTCTCTCTTTGCCTCCAAGAAGTGTAACCGCCTTGAAGAGCTGATGAAGCCCTTGAAGGTAGTGGACCCAGATCATCCCCTCGCAGC ACTTGTTCGTAAGGCACAGGCTGACAGTTCCACTCCCACCCCACACAACGCAGACGGTGCGCCTGTGCAGCCCTCCCAGGTGGAGTACAC GGCAGACTCGACCGTGGCAGCCATGTATTACAGCTACTACATGCTACCGGACGGCACTTACTGCCTGGCGCCGCCCCCTCCCGGAATCGA CGTGACTACTTACTACAGCACCCTTCCTGCTGGCGTGACCGTGTCTAACTCCCCTGGAGTGACGACCACCGCCCCACCACCTCCTGGGAC CACACCACTACCGCCCCCAACCACAGCAGAGACTAGCAGCGGGGCCACCTCCACAACCACCACCACAAGTGCACTTGCCCCCGTGGCCGC CATCATCCCCCCGCCCCCCGACGTCCAGCCCGTGATTGACAAGCTGGCCGAGTATGTCGCCAGGAACGGCCTGAAGTTCGAGACCAGTGT TCGTGCCAAGAATGATCAAAGATTTGAGTTCCTGCAGCCGTGGCACCAGTATAATGCTTATTATGAGTTTAAGAAGCAGTTCTTCCTCCA GAAAGAAGGGGGCGATAGCATGCAGGCTGTGTCTGCACCAGAAGAGGCTCCCACAGACTCTGCTCCCGAGAAGCCAAGTGATGCTGGGGA GGATGGCGCGCCTGAAGACGCAGCCGAGGTGGGAGCACGGGCAGGCTCAGGCGGGAAGAAGGAGGCATCGTCCAGTAAGACCGTCCCGGA CGGGAAGCTGGTGAAAGCTTCCTTTGCTCCAATAAGCTTTGCAATCAAGGCCAAAGAAAATGATCTGCTTCCCCTGGAAAAAAATCGTGT TAAGCTAGATGATGACAGTGATGATGATGAAGAAAGCAAAGAAGGCCAAGAAAGTTCTAGTAGTGCTGCAAACACTAACCCAGCAGTTGC CCCACCCTGTGTAGTTGTTGAGGAGAAGAAGCCTCAACTTACCCAGGAGGAGCTAGAAGCAAAGCAAGCAAAGCAAAAGCTGGAAGATCG CCTCGCAGCTGCTGCCCGGGAAAAGCTGGCCCAGGCGTCTAAGGAGTCAAAAGAGAAACAGCTTCAAGCAGAACGTAAAAGGAAAGCGGC GTTATTTTTACAGACCCTCAAAAATCCTCTGCCGGAAGCAGAAGCTGGGAAAATTGAGGAGAGTCCTTTCAGTGTCGAGGAATCCAGCAC TACGCCCTGCCCTCTACTGACTGGAGGCAGGCCTCTGCCTACTTTAGAAGTTAAACCACCCGATAGGCCTTCGAGCAAAAGCAAAGATCC ACCGAGAGAAGAAGAGAAAGAAAAGAAAAAGAAAAAGCACAAAAAAAGATCTCGAACAAGATCACGTTCTCCCAAGTACCATTCGTCATC CAAGTCCAGGTCTAGATCACACTCAAAAGCAAAGCATTCTCTTCCCAGTGCCTATCGGACAGTGCGGCGGTCGAGAGTCACAGCCTCCCC AGGGACGCTGCGCGCGGAGCCCTGTCAGAGCAGCGCGTCAGTGACAGCGGCAGCCGAGCCAGGAAGTTATCAGGCAGCCTCGACCACCAC CAGATTTGACTCCGCGAGCTCTTTTGAGGGAAAACCTGGTAAAACGTCAAGGTCCCGCTCCCGGTCCCCTCGGAGGAGAGCCCACTCCCC TGAGAGACGGAGGGAAGAGAGGAGTGTGCCCACTGCCTACCGCGTGAGCCGCAGCCCTGGGGCCAGTAGGAAGCGGACCCGCTCCAGAAG TCCCCACGAGAAGAAGAAGAAGAGGCGGTCCCGGTCGCGGACCAAGTCCAAGGCCAGGTCTCAGTCGGTGTCACCCAGCAAGCAGGCAGC GCCCCGGCCCGCGGCCCCCGCGGCCCACTCGGCGCACTCAGCCAGCGTCTCCCCTGTGGAGAGTCGGGGCTCCAGCCAGGAGCGCTCCAG GGGAGTCTCTCAGGAAAAAGAAGCCCAGATCTCTTCAGCAATCGTTTCTTCCGTGCAGAGCAAAATCACTCAGGATCTCATGGCCAAAGT CAGAGCGATGCTTGCAGCTTCCAAAAACCTGCAAACCAGCGCTTCCTGAGACGGGGCCAGCGGAGGCAGAGCCGGGAGGCTGCGTGGGCT >79530_79530_2_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000261693_SFSWAP_chr12_132209950_ENST00000541286_length(amino acids)=877AA_BP=76 MRARSPRLCRLCRRPRLLPGAEPCEPRVGPRRADMGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKPPTAKMHAIIERTA SFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAENKSDEKKKSGVSSDNEDDDDEEDGNYLHPSLFASKK CNRLEELMKPLKVVDPDHPLAALVRKAQADSSTPTPHNADGAPVQPSQVEYTADSTVAAMYYSYYMLPDGTYCLAPPPPGIDVTTYYSTL PAGVTVSNSPGVTTTAPPPPGTTPLPPPTTAETSSGATSTTTTTSALAPVAAIIPPPPDVQPVIDKLAEYVARNGLKFETSVRAKNDQRF EFLQPWHQYNAYYEFKKQFFLQKEGGDSMQAVSAPEEAPTDSAPEKPSDAGEDGAPEDAAEVGARAGSGGKKEASSSKTVPDGKLVKASF APISFAIKAKENDLLPLEKNRVKLDDDSDDDEESKEGQESSSSAANTNPAVAPPCVVVEEKKPQLTQEELEAKQAKQKLEDRLAAAAREK LAQASKESKEKQLQAERKRKAALFLQTLKNPLPEAEAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPREEEKEK KKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRVTASPGTLRAEPCQSSASVTAAAEPGSYQAASTTTRFDSASSF EGKPGKTSRSRSRSPRRRAHSPERRREERSVPTAYRVSRSPGASRKRTRSRSPHEKKKKRRSRSRTKSKARSQSVSPSKQAAPRPAAPAA -------------------------------------------------------------- >79530_79530_3_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000339570_SFSWAP_chr12_132209950_ENST00000261674_length(transcript)=2822nt_BP=323nt TCCGGCGGCGCCGGCGATGGGGCATAAAACCACTGGCCACCTGCCGGGCTGCTCCTGCGTGCGCTGCCGTCCCGGATCCACCGTGCCTCT GCGGCCTGCGTGCCCGGAGTCCCCGCCTGTGTCGTCTCTGTCGCCGTCCCCGTCTCCTGCCAGGCGCGGAGCCCTGCGAGCCGCGGGTGG GCCCCAGGCGCGCAGACATGGGCTGCTCCGCCAAAGCGCGCTGGGCTGCCGGGGCGCTGGGCGTCGCGGGGCTACTGTGCGCTGTGCTGG GCGCTGTCATGATCGTGATGGTGCCGTCGCTCATCAAGCAGCAGGTCCTTAAGCCACCAACCGCTAAAATGCACGCCATCATCGAGCGCA CGGCCAGCTTCGTGTGCAGGCAGGGAGCACAGTTTGAGATCATGCTGAAGGCCAAGCAGGCCCGGAACTCCCAGTTTGACTTTCTGCGCT TCGACCACTACCTCAACCCCTACTATAAGTTCATCCAGAAAGCCATGAAAGAGGGACGCTACACTGTCCTGGCAGAAAACAAAAGTGACG AGAAAAAAAAATCAGGAGTCAGCTCTGACAATGAAGATGATGATGATGAAGAAGATGGGAATTACCTTCATCCCTCTCTCTTTGCCTCCA AGAAGTGTAACCGCCTTGAAGAGCTGATGAAGCCCTTGAAGGTAGTGGACCCAGATCATCCCCTCGCAGCACTTGTTCGTAAGGCACAGG CTGACAGTTCCACTCCCACCCCACACAACGCAGACGGTGCGCCTGTGCAGCCCTCCCAGGTGGAGTACACGGCAGACTCGACCGTGGCAG CCATGTATTACAGCTACTACATGCTACCGGACGGCACTTACTGCCTGGCGCCGCCCCCTCCCGGAATCGACGTGACTACTTACTACAGCA CCCTTCCTGCTGGCGTGACCGTGTCTAACTCCCCTGGAGTGACGACCACCGCCCCACCACCTCCTGGGACCACACCACTACCGCCCCCAA CCACAGCAGAGACTAGCAGCGGGGCCACCTCCACAACCACCACCACAAGTGCACTTGCCCCCGTGGCCGCCATCATCCCCCCGCCCCCCG ACGTCCAGCCCGTGATTGACAAGCTGGCCGAGTATGTCGCCAGGAACGGCCTGAAGTTCGAGACCAGTGTTCGTGCCAAGAATGATCAAA GATTTGAGTTCCTGCAGCCGTGGCACCAGTATAATGCTTATTATGAGTTTAAGAAGCAGTTCTTCCTCCAGAAAGAAGGGGGCGATAGCA TGCAGGCTGTGTCTGCACCAGAAGAGGCTCCCACAGACTCTGCTCCCGAGAAGCCAAGTGATGCTGGGGAGGATGGCGCGCCTGAAGACG CAGCCGAGGTGGGAGCACGGGCAGGCTCAGGCGGGAAGAAGGAGGCATCGTCCAGTAAGACCGTCCCGGACGGGAAGCTGGTGAAAGCTT CCTTTGCTCCAATAAGCTTTGCAATCAAGGCCAAAGAAAATGATCTGCTTCCCCTGGAAAAAAATCGTGTTAAGCTAGATGATGACAGTG ATGATGATGAAGAAAGCAAAGAAGGCCAAGAAAGTTCTAGTAGTGCTGCAAACACTAACCCAGCAGTTGCCCCACCCTGTGTAGTTGTTG AGGAGAAGAAGCCTCAACTTACCCAGGAGGAGCTAGAAGCAAAGCAAGCAAAGCAAAAGCTGGAAGATCGCCTCGCAGCTGCTGCCCGGG AAAAGCTGGCCCAGGCGTCTAAGGAGTCAAAAGAGAAACAGCTTCAAGCAGAACGTAAAAGGAAAGCGGCGTTATTTTTACAGACCCTCA AAAATCCTCTGCCGGAAGCAGAAGCTGGGAAAATTGAGGAGAGTCCTTTCAGTGTCGAGGAATCCAGCACTACGCCCTGCCCTCTACTGA CTGGAGGCAGGCCTCTGCCTACTTTAGAAGTTAAACCACCCGATAGGCCTTCGAGCAAAAGCAAAGATCCACCGAGAGAAGAAGAGAAAG AAAAGAAAAAGAAAAAGCACAAAAAAAGATCTCGAACAAGATCACGTTCTCCCAAGTACCATTCGTCATCCAAGTCCAGGTCTAGATCAC ACTCAAAAGCAAAGCATTCTCTTCCCAGTGCCTATCGGACAGTGCGGCGGTCGAGGTCCCGCTCCCGGTCCCCTCGGAGGAGAGCCCACT CCCCTGAGAGACGGAGGGAAGAGAGGAGTGTGCCCACTGCCTACCGCGTGAGCCGCAGCCCTGGGGCCAGTAGGAAGCGGACCCGCTCCA GAAGTCCCCACGAGAAGAAGAAGAAGAGGCGGTCCCGGTCGCGGACCAAGTCCAAGGCCAGGTCTCAGTCGGTGTCACCCAGCAAGCAGG CAGCGCCCCGGCCCGCGGCCCCCGCGGCCCACTCGGCGCACTCAGCCAGCGTCTCCCCTGTGGAGAGTCGGGGCTCCAGCCAGGAGCGCT CCAGGGGAGTCTCTCAGGAAAAAGAAGCCCAGATCTCTTCAGCAATCGTTTCTTCCGTGCAGAGCAAAATCACTCAGGATCTCATGGCCA AAGTCAGAGCGATGCTTGCAGCTTCCAAAAACCTGCAAACCAGCGCTTCCTGAGACGGGGCCAGCGGAGGCAGAGCCGGGAGGCTGCGTG GGCTTCTGGGCAGGCTCACGCAGACGCCGGCCACACCATCCACCTGGCCGCCTCCATGGACCCTTGGTGGCTTTTGTAAATTAATTTTTG ATGACATTTTGAGTTTTAAGATTTCTGACCAGCAGTCTCTTACCTGTATATTTGTAAATATATCATGTTTCTGTGAAAATGTATTATGAA >79530_79530_3_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000339570_SFSWAP_chr12_132209950_ENST00000261674_length(amino acids)=846AA_BP=97 MATCRAAPACAAVPDPPCLCGLRARSPRLCRLCRRPRLLPGAEPCEPRVGPRRADMGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSL IKQQVLKPPTAKMHAIIERTASFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAENKSDEKKKSGVSSDN EDDDDEEDGNYLHPSLFASKKCNRLEELMKPLKVVDPDHPLAALVRKAQADSSTPTPHNADGAPVQPSQVEYTADSTVAAMYYSYYMLPD GTYCLAPPPPGIDVTTYYSTLPAGVTVSNSPGVTTTAPPPPGTTPLPPPTTAETSSGATSTTTTTSALAPVAAIIPPPPDVQPVIDKLAE YVARNGLKFETSVRAKNDQRFEFLQPWHQYNAYYEFKKQFFLQKEGGDSMQAVSAPEEAPTDSAPEKPSDAGEDGAPEDAAEVGARAGSG GKKEASSSKTVPDGKLVKASFAPISFAIKAKENDLLPLEKNRVKLDDDSDDDEESKEGQESSSSAANTNPAVAPPCVVVEEKKPQLTQEE LEAKQAKQKLEDRLAAAAREKLAQASKESKEKQLQAERKRKAALFLQTLKNPLPEAEAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEV KPPDRPSSKSKDPPREEEKEKKKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPRRRAHSPERRREERSV PTAYRVSRSPGASRKRTRSRSPHEKKKKRRSRSRTKSKARSQSVSPSKQAAPRPAAPAAHSAHSASVSPVESRGSSQERSRGVSQEKEAQ -------------------------------------------------------------- >79530_79530_4_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000339570_SFSWAP_chr12_132209950_ENST00000541286_length(transcript)=2843nt_BP=323nt TCCGGCGGCGCCGGCGATGGGGCATAAAACCACTGGCCACCTGCCGGGCTGCTCCTGCGTGCGCTGCCGTCCCGGATCCACCGTGCCTCT GCGGCCTGCGTGCCCGGAGTCCCCGCCTGTGTCGTCTCTGTCGCCGTCCCCGTCTCCTGCCAGGCGCGGAGCCCTGCGAGCCGCGGGTGG GCCCCAGGCGCGCAGACATGGGCTGCTCCGCCAAAGCGCGCTGGGCTGCCGGGGCGCTGGGCGTCGCGGGGCTACTGTGCGCTGTGCTGG GCGCTGTCATGATCGTGATGGTGCCGTCGCTCATCAAGCAGCAGGTCCTTAAGCCACCAACCGCTAAAATGCACGCCATCATCGAGCGCA CGGCCAGCTTCGTGTGCAGGCAGGGAGCACAGTTTGAGATCATGCTGAAGGCCAAGCAGGCCCGGAACTCCCAGTTTGACTTTCTGCGCT TCGACCACTACCTCAACCCCTACTATAAGTTCATCCAGAAAGCCATGAAAGAGGGACGCTACACTGTCCTGGCAGAAAACAAAAGTGACG AGAAAAAAAAATCAGGAGTCAGCTCTGACAATGAAGATGATGATGATGAAGAAGATGGGAATTACCTTCATCCCTCTCTCTTTGCCTCCA AGAAGTGTAACCGCCTTGAAGAGCTGATGAAGCCCTTGAAGGTAGTGGACCCAGATCATCCCCTCGCAGCACTTGTTCGTAAGGCACAGG CTGACAGTTCCACTCCCACCCCACACAACGCAGACGGTGCGCCTGTGCAGCCCTCCCAGGTGGAGTACACGGCAGACTCGACCGTGGCAG CCATGTATTACAGCTACTACATGCTACCGGACGGCACTTACTGCCTGGCGCCGCCCCCTCCCGGAATCGACGTGACTACTTACTACAGCA CCCTTCCTGCTGGCGTGACCGTGTCTAACTCCCCTGGAGTGACGACCACCGCCCCACCACCTCCTGGGACCACACCACTACCGCCCCCAA CCACAGCAGAGACTAGCAGCGGGGCCACCTCCACAACCACCACCACAAGTGCACTTGCCCCCGTGGCCGCCATCATCCCCCCGCCCCCCG ACGTCCAGCCCGTGATTGACAAGCTGGCCGAGTATGTCGCCAGGAACGGCCTGAAGTTCGAGACCAGTGTTCGTGCCAAGAATGATCAAA GATTTGAGTTCCTGCAGCCGTGGCACCAGTATAATGCTTATTATGAGTTTAAGAAGCAGTTCTTCCTCCAGAAAGAAGGGGGCGATAGCA TGCAGGCTGTGTCTGCACCAGAAGAGGCTCCCACAGACTCTGCTCCCGAGAAGCCAAGTGATGCTGGGGAGGATGGCGCGCCTGAAGACG CAGCCGAGGTGGGAGCACGGGCAGGCTCAGGCGGGAAGAAGGAGGCATCGTCCAGTAAGACCGTCCCGGACGGGAAGCTGGTGAAAGCTT CCTTTGCTCCAATAAGCTTTGCAATCAAGGCCAAAGAAAATGATCTGCTTCCCCTGGAAAAAAATCGTGTTAAGCTAGATGATGACAGTG ATGATGATGAAGAAAGCAAAGAAGGCCAAGAAAGTTCTAGTAGTGCTGCAAACACTAACCCAGCAGTTGCCCCACCCTGTGTAGTTGTTG AGGAGAAGAAGCCTCAACTTACCCAGGAGGAGCTAGAAGCAAAGCAAGCAAAGCAAAAGCTGGAAGATCGCCTCGCAGCTGCTGCCCGGG AAAAGCTGGCCCAGGCGTCTAAGGAGTCAAAAGAGAAACAGCTTCAAGCAGAACGTAAAAGGAAAGCGGCGTTATTTTTACAGACCCTCA AAAATCCTCTGCCGGAAGCAGAAGCTGGGAAAATTGAGGAGAGTCCTTTCAGTGTCGAGGAATCCAGCACTACGCCCTGCCCTCTACTGA CTGGAGGCAGGCCTCTGCCTACTTTAGAAGTTAAACCACCCGATAGGCCTTCGAGCAAAAGCAAAGATCCACCGAGAGAAGAAGAGAAAG AAAAGAAAAAGAAAAAGCACAAAAAAAGATCTCGAACAAGATCACGTTCTCCCAAGTACCATTCGTCATCCAAGTCCAGGTCTAGATCAC ACTCAAAAGCAAAGCATTCTCTTCCCAGTGCCTATCGGACAGTGCGGCGGTCGAGAGTCACAGCCTCCCCAGGGACGCTGCGCGCGGAGC CCTGTCAGAGCAGCGCGTCAGTGACAGCGGCAGCCGAGCCAGGAAGTTATCAGGCAGCCTCGACCACCACCAGATTTGACTCCGCGAGCT CTTTTGAGGGAAAACCTGGTAAAACGTCAAGGTCCCGCTCCCGGTCCCCTCGGAGGAGAGCCCACTCCCCTGAGAGACGGAGGGAAGAGA GGAGTGTGCCCACTGCCTACCGCGTGAGCCGCAGCCCTGGGGCCAGTAGGAAGCGGACCCGCTCCAGAAGTCCCCACGAGAAGAAGAAGA AGAGGCGGTCCCGGTCGCGGACCAAGTCCAAGGCCAGGTCTCAGTCGGTGTCACCCAGCAAGCAGGCAGCGCCCCGGCCCGCGGCCCCCG CGGCCCACTCGGCGCACTCAGCCAGCGTCTCCCCTGTGGAGAGTCGGGGCTCCAGCCAGGAGCGCTCCAGGGGAGTCTCTCAGGAAAAAG AAGCCCAGATCTCTTCAGCAATCGTTTCTTCCGTGCAGAGCAAAATCACTCAGGATCTCATGGCCAAAGTCAGAGCGATGCTTGCAGCTT CCAAAAACCTGCAAACCAGCGCTTCCTGAGACGGGGCCAGCGGAGGCAGAGCCGGGAGGCTGCGTGGGCTTCTGGGCAGGCTCACGCAGA >79530_79530_4_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000339570_SFSWAP_chr12_132209950_ENST00000541286_length(amino acids)=898AA_BP=97 MATCRAAPACAAVPDPPCLCGLRARSPRLCRLCRRPRLLPGAEPCEPRVGPRRADMGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSL IKQQVLKPPTAKMHAIIERTASFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAENKSDEKKKSGVSSDN EDDDDEEDGNYLHPSLFASKKCNRLEELMKPLKVVDPDHPLAALVRKAQADSSTPTPHNADGAPVQPSQVEYTADSTVAAMYYSYYMLPD GTYCLAPPPPGIDVTTYYSTLPAGVTVSNSPGVTTTAPPPPGTTPLPPPTTAETSSGATSTTTTTSALAPVAAIIPPPPDVQPVIDKLAE YVARNGLKFETSVRAKNDQRFEFLQPWHQYNAYYEFKKQFFLQKEGGDSMQAVSAPEEAPTDSAPEKPSDAGEDGAPEDAAEVGARAGSG GKKEASSSKTVPDGKLVKASFAPISFAIKAKENDLLPLEKNRVKLDDDSDDDEESKEGQESSSSAANTNPAVAPPCVVVEEKKPQLTQEE LEAKQAKQKLEDRLAAAAREKLAQASKESKEKQLQAERKRKAALFLQTLKNPLPEAEAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEV KPPDRPSSKSKDPPREEEKEKKKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRVTASPGTLRAEPCQSSASVTAA AEPGSYQAASTTTRFDSASSFEGKPGKTSRSRSRSPRRRAHSPERRREERSVPTAYRVSRSPGASRKRTRSRSPHEKKKKRRSRSRTKSK -------------------------------------------------------------- >79530_79530_5_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000376788_SFSWAP_chr12_132209950_ENST00000261674_length(transcript)=2752nt_BP=253nt CCCGGATCCACCGTGCCTCTGCGGCCTGCGTGCCCGGAGTCCCCGCCTGTGTCGTCTCTGTCGCCGTCCCCGTCTCCTGCCAGGCGCGGA GCCCTGCGAGCCGCGGGTGGGCCCCAGGCGCGCAGACATGGGCTGCTCCGCCAAAGCGCGCTGGGCTGCCGGGGCGCTGGGCGTCGCGGG GCTACTGTGCGCTGTGCTGGGCGCTGTCATGATCGTGATGGTGCCGTCGCTCATCAAGCAGCAGGTCCTTAAGCCACCAACCGCTAAAAT GCACGCCATCATCGAGCGCACGGCCAGCTTCGTGTGCAGGCAGGGAGCACAGTTTGAGATCATGCTGAAGGCCAAGCAGGCCCGGAACTC CCAGTTTGACTTTCTGCGCTTCGACCACTACCTCAACCCCTACTATAAGTTCATCCAGAAAGCCATGAAAGAGGGACGCTACACTGTCCT GGCAGAAAACAAAAGTGACGAGAAAAAAAAATCAGGAGTCAGCTCTGACAATGAAGATGATGATGATGAAGAAGATGGGAATTACCTTCA TCCCTCTCTCTTTGCCTCCAAGAAGTGTAACCGCCTTGAAGAGCTGATGAAGCCCTTGAAGGTAGTGGACCCAGATCATCCCCTCGCAGC ACTTGTTCGTAAGGCACAGGCTGACAGTTCCACTCCCACCCCACACAACGCAGACGGTGCGCCTGTGCAGCCCTCCCAGGTGGAGTACAC GGCAGACTCGACCGTGGCAGCCATGTATTACAGCTACTACATGCTACCGGACGGCACTTACTGCCTGGCGCCGCCCCCTCCCGGAATCGA CGTGACTACTTACTACAGCACCCTTCCTGCTGGCGTGACCGTGTCTAACTCCCCTGGAGTGACGACCACCGCCCCACCACCTCCTGGGAC CACACCACTACCGCCCCCAACCACAGCAGAGACTAGCAGCGGGGCCACCTCCACAACCACCACCACAAGTGCACTTGCCCCCGTGGCCGC CATCATCCCCCCGCCCCCCGACGTCCAGCCCGTGATTGACAAGCTGGCCGAGTATGTCGCCAGGAACGGCCTGAAGTTCGAGACCAGTGT TCGTGCCAAGAATGATCAAAGATTTGAGTTCCTGCAGCCGTGGCACCAGTATAATGCTTATTATGAGTTTAAGAAGCAGTTCTTCCTCCA GAAAGAAGGGGGCGATAGCATGCAGGCTGTGTCTGCACCAGAAGAGGCTCCCACAGACTCTGCTCCCGAGAAGCCAAGTGATGCTGGGGA GGATGGCGCGCCTGAAGACGCAGCCGAGGTGGGAGCACGGGCAGGCTCAGGCGGGAAGAAGGAGGCATCGTCCAGTAAGACCGTCCCGGA CGGGAAGCTGGTGAAAGCTTCCTTTGCTCCAATAAGCTTTGCAATCAAGGCCAAAGAAAATGATCTGCTTCCCCTGGAAAAAAATCGTGT TAAGCTAGATGATGACAGTGATGATGATGAAGAAAGCAAAGAAGGCCAAGAAAGTTCTAGTAGTGCTGCAAACACTAACCCAGCAGTTGC CCCACCCTGTGTAGTTGTTGAGGAGAAGAAGCCTCAACTTACCCAGGAGGAGCTAGAAGCAAAGCAAGCAAAGCAAAAGCTGGAAGATCG CCTCGCAGCTGCTGCCCGGGAAAAGCTGGCCCAGGCGTCTAAGGAGTCAAAAGAGAAACAGCTTCAAGCAGAACGTAAAAGGAAAGCGGC GTTATTTTTACAGACCCTCAAAAATCCTCTGCCGGAAGCAGAAGCTGGGAAAATTGAGGAGAGTCCTTTCAGTGTCGAGGAATCCAGCAC TACGCCCTGCCCTCTACTGACTGGAGGCAGGCCTCTGCCTACTTTAGAAGTTAAACCACCCGATAGGCCTTCGAGCAAAAGCAAAGATCC ACCGAGAGAAGAAGAGAAAGAAAAGAAAAAGAAAAAGCACAAAAAAAGATCTCGAACAAGATCACGTTCTCCCAAGTACCATTCGTCATC CAAGTCCAGGTCTAGATCACACTCAAAAGCAAAGCATTCTCTTCCCAGTGCCTATCGGACAGTGCGGCGGTCGAGGTCCCGCTCCCGGTC CCCTCGGAGGAGAGCCCACTCCCCTGAGAGACGGAGGGAAGAGAGGAGTGTGCCCACTGCCTACCGCGTGAGCCGCAGCCCTGGGGCCAG TAGGAAGCGGACCCGCTCCAGAAGTCCCCACGAGAAGAAGAAGAAGAGGCGGTCCCGGTCGCGGACCAAGTCCAAGGCCAGGTCTCAGTC GGTGTCACCCAGCAAGCAGGCAGCGCCCCGGCCCGCGGCCCCCGCGGCCCACTCGGCGCACTCAGCCAGCGTCTCCCCTGTGGAGAGTCG GGGCTCCAGCCAGGAGCGCTCCAGGGGAGTCTCTCAGGAAAAAGAAGCCCAGATCTCTTCAGCAATCGTTTCTTCCGTGCAGAGCAAAAT CACTCAGGATCTCATGGCCAAAGTCAGAGCGATGCTTGCAGCTTCCAAAAACCTGCAAACCAGCGCTTCCTGAGACGGGGCCAGCGGAGG CAGAGCCGGGAGGCTGCGTGGGCTTCTGGGCAGGCTCACGCAGACGCCGGCCACACCATCCACCTGGCCGCCTCCATGGACCCTTGGTGG CTTTTGTAAATTAATTTTTGATGACATTTTGAGTTTTAAGATTTCTGACCAGCAGTCTCTTACCTGTATATTTGTAAATATATCATGTTT >79530_79530_5_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000376788_SFSWAP_chr12_132209950_ENST00000261674_length(amino acids)=825AA_BP=76 MRARSPRLCRLCRRPRLLPGAEPCEPRVGPRRADMGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKPPTAKMHAIIERTA SFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAENKSDEKKKSGVSSDNEDDDDEEDGNYLHPSLFASKK CNRLEELMKPLKVVDPDHPLAALVRKAQADSSTPTPHNADGAPVQPSQVEYTADSTVAAMYYSYYMLPDGTYCLAPPPPGIDVTTYYSTL PAGVTVSNSPGVTTTAPPPPGTTPLPPPTTAETSSGATSTTTTTSALAPVAAIIPPPPDVQPVIDKLAEYVARNGLKFETSVRAKNDQRF EFLQPWHQYNAYYEFKKQFFLQKEGGDSMQAVSAPEEAPTDSAPEKPSDAGEDGAPEDAAEVGARAGSGGKKEASSSKTVPDGKLVKASF APISFAIKAKENDLLPLEKNRVKLDDDSDDDEESKEGQESSSSAANTNPAVAPPCVVVEEKKPQLTQEELEAKQAKQKLEDRLAAAAREK LAQASKESKEKQLQAERKRKAALFLQTLKNPLPEAEAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPREEEKEK KKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPRRRAHSPERRREERSVPTAYRVSRSPGASRKRTRSRS PHEKKKKRRSRSRTKSKARSQSVSPSKQAAPRPAAPAAHSAHSASVSPVESRGSSQERSRGVSQEKEAQISSAIVSSVQSKITQDLMAKV -------------------------------------------------------------- >79530_79530_6_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000376788_SFSWAP_chr12_132209950_ENST00000541286_length(transcript)=2773nt_BP=253nt CCCGGATCCACCGTGCCTCTGCGGCCTGCGTGCCCGGAGTCCCCGCCTGTGTCGTCTCTGTCGCCGTCCCCGTCTCCTGCCAGGCGCGGA GCCCTGCGAGCCGCGGGTGGGCCCCAGGCGCGCAGACATGGGCTGCTCCGCCAAAGCGCGCTGGGCTGCCGGGGCGCTGGGCGTCGCGGG GCTACTGTGCGCTGTGCTGGGCGCTGTCATGATCGTGATGGTGCCGTCGCTCATCAAGCAGCAGGTCCTTAAGCCACCAACCGCTAAAAT GCACGCCATCATCGAGCGCACGGCCAGCTTCGTGTGCAGGCAGGGAGCACAGTTTGAGATCATGCTGAAGGCCAAGCAGGCCCGGAACTC CCAGTTTGACTTTCTGCGCTTCGACCACTACCTCAACCCCTACTATAAGTTCATCCAGAAAGCCATGAAAGAGGGACGCTACACTGTCCT GGCAGAAAACAAAAGTGACGAGAAAAAAAAATCAGGAGTCAGCTCTGACAATGAAGATGATGATGATGAAGAAGATGGGAATTACCTTCA TCCCTCTCTCTTTGCCTCCAAGAAGTGTAACCGCCTTGAAGAGCTGATGAAGCCCTTGAAGGTAGTGGACCCAGATCATCCCCTCGCAGC ACTTGTTCGTAAGGCACAGGCTGACAGTTCCACTCCCACCCCACACAACGCAGACGGTGCGCCTGTGCAGCCCTCCCAGGTGGAGTACAC GGCAGACTCGACCGTGGCAGCCATGTATTACAGCTACTACATGCTACCGGACGGCACTTACTGCCTGGCGCCGCCCCCTCCCGGAATCGA CGTGACTACTTACTACAGCACCCTTCCTGCTGGCGTGACCGTGTCTAACTCCCCTGGAGTGACGACCACCGCCCCACCACCTCCTGGGAC CACACCACTACCGCCCCCAACCACAGCAGAGACTAGCAGCGGGGCCACCTCCACAACCACCACCACAAGTGCACTTGCCCCCGTGGCCGC CATCATCCCCCCGCCCCCCGACGTCCAGCCCGTGATTGACAAGCTGGCCGAGTATGTCGCCAGGAACGGCCTGAAGTTCGAGACCAGTGT TCGTGCCAAGAATGATCAAAGATTTGAGTTCCTGCAGCCGTGGCACCAGTATAATGCTTATTATGAGTTTAAGAAGCAGTTCTTCCTCCA GAAAGAAGGGGGCGATAGCATGCAGGCTGTGTCTGCACCAGAAGAGGCTCCCACAGACTCTGCTCCCGAGAAGCCAAGTGATGCTGGGGA GGATGGCGCGCCTGAAGACGCAGCCGAGGTGGGAGCACGGGCAGGCTCAGGCGGGAAGAAGGAGGCATCGTCCAGTAAGACCGTCCCGGA CGGGAAGCTGGTGAAAGCTTCCTTTGCTCCAATAAGCTTTGCAATCAAGGCCAAAGAAAATGATCTGCTTCCCCTGGAAAAAAATCGTGT TAAGCTAGATGATGACAGTGATGATGATGAAGAAAGCAAAGAAGGCCAAGAAAGTTCTAGTAGTGCTGCAAACACTAACCCAGCAGTTGC CCCACCCTGTGTAGTTGTTGAGGAGAAGAAGCCTCAACTTACCCAGGAGGAGCTAGAAGCAAAGCAAGCAAAGCAAAAGCTGGAAGATCG CCTCGCAGCTGCTGCCCGGGAAAAGCTGGCCCAGGCGTCTAAGGAGTCAAAAGAGAAACAGCTTCAAGCAGAACGTAAAAGGAAAGCGGC GTTATTTTTACAGACCCTCAAAAATCCTCTGCCGGAAGCAGAAGCTGGGAAAATTGAGGAGAGTCCTTTCAGTGTCGAGGAATCCAGCAC TACGCCCTGCCCTCTACTGACTGGAGGCAGGCCTCTGCCTACTTTAGAAGTTAAACCACCCGATAGGCCTTCGAGCAAAAGCAAAGATCC ACCGAGAGAAGAAGAGAAAGAAAAGAAAAAGAAAAAGCACAAAAAAAGATCTCGAACAAGATCACGTTCTCCCAAGTACCATTCGTCATC CAAGTCCAGGTCTAGATCACACTCAAAAGCAAAGCATTCTCTTCCCAGTGCCTATCGGACAGTGCGGCGGTCGAGAGTCACAGCCTCCCC AGGGACGCTGCGCGCGGAGCCCTGTCAGAGCAGCGCGTCAGTGACAGCGGCAGCCGAGCCAGGAAGTTATCAGGCAGCCTCGACCACCAC CAGATTTGACTCCGCGAGCTCTTTTGAGGGAAAACCTGGTAAAACGTCAAGGTCCCGCTCCCGGTCCCCTCGGAGGAGAGCCCACTCCCC TGAGAGACGGAGGGAAGAGAGGAGTGTGCCCACTGCCTACCGCGTGAGCCGCAGCCCTGGGGCCAGTAGGAAGCGGACCCGCTCCAGAAG TCCCCACGAGAAGAAGAAGAAGAGGCGGTCCCGGTCGCGGACCAAGTCCAAGGCCAGGTCTCAGTCGGTGTCACCCAGCAAGCAGGCAGC GCCCCGGCCCGCGGCCCCCGCGGCCCACTCGGCGCACTCAGCCAGCGTCTCCCCTGTGGAGAGTCGGGGCTCCAGCCAGGAGCGCTCCAG GGGAGTCTCTCAGGAAAAAGAAGCCCAGATCTCTTCAGCAATCGTTTCTTCCGTGCAGAGCAAAATCACTCAGGATCTCATGGCCAAAGT CAGAGCGATGCTTGCAGCTTCCAAAAACCTGCAAACCAGCGCTTCCTGAGACGGGGCCAGCGGAGGCAGAGCCGGGAGGCTGCGTGGGCT >79530_79530_6_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000376788_SFSWAP_chr12_132209950_ENST00000541286_length(amino acids)=877AA_BP=76 MRARSPRLCRLCRRPRLLPGAEPCEPRVGPRRADMGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKPPTAKMHAIIERTA SFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAENKSDEKKKSGVSSDNEDDDDEEDGNYLHPSLFASKK CNRLEELMKPLKVVDPDHPLAALVRKAQADSSTPTPHNADGAPVQPSQVEYTADSTVAAMYYSYYMLPDGTYCLAPPPPGIDVTTYYSTL PAGVTVSNSPGVTTTAPPPPGTTPLPPPTTAETSSGATSTTTTTSALAPVAAIIPPPPDVQPVIDKLAEYVARNGLKFETSVRAKNDQRF EFLQPWHQYNAYYEFKKQFFLQKEGGDSMQAVSAPEEAPTDSAPEKPSDAGEDGAPEDAAEVGARAGSGGKKEASSSKTVPDGKLVKASF APISFAIKAKENDLLPLEKNRVKLDDDSDDDEESKEGQESSSSAANTNPAVAPPCVVVEEKKPQLTQEELEAKQAKQKLEDRLAAAAREK LAQASKESKEKQLQAERKRKAALFLQTLKNPLPEAEAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPREEEKEK KKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRVTASPGTLRAEPCQSSASVTAAAEPGSYQAASTTTRFDSASSF EGKPGKTSRSRSRSPRRRAHSPERRREERSVPTAYRVSRSPGASRKRTRSRSPHEKKKKRRSRSRTKSKARSQSVSPSKQAAPRPAAPAA -------------------------------------------------------------- >79530_79530_7_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000415380_SFSWAP_chr12_132209950_ENST00000261674_length(transcript)=2751nt_BP=252nt CCGGATCCACCGTGCCTCTGCGGCCTGCGTGCCCGGAGTCCCCGCCTGTGTCGTCTCTGTCGCCGTCCCCGTCTCCTGCCAGGCGCGGAG CCCTGCGAGCCGCGGGTGGGCCCCAGGCGCGCAGACATGGGCTGCTCCGCCAAAGCGCGCTGGGCTGCCGGGGCGCTGGGCGTCGCGGGG CTACTGTGCGCTGTGCTGGGCGCTGTCATGATCGTGATGGTGCCGTCGCTCATCAAGCAGCAGGTCCTTAAGCCACCAACCGCTAAAATG CACGCCATCATCGAGCGCACGGCCAGCTTCGTGTGCAGGCAGGGAGCACAGTTTGAGATCATGCTGAAGGCCAAGCAGGCCCGGAACTCC CAGTTTGACTTTCTGCGCTTCGACCACTACCTCAACCCCTACTATAAGTTCATCCAGAAAGCCATGAAAGAGGGACGCTACACTGTCCTG GCAGAAAACAAAAGTGACGAGAAAAAAAAATCAGGAGTCAGCTCTGACAATGAAGATGATGATGATGAAGAAGATGGGAATTACCTTCAT CCCTCTCTCTTTGCCTCCAAGAAGTGTAACCGCCTTGAAGAGCTGATGAAGCCCTTGAAGGTAGTGGACCCAGATCATCCCCTCGCAGCA CTTGTTCGTAAGGCACAGGCTGACAGTTCCACTCCCACCCCACACAACGCAGACGGTGCGCCTGTGCAGCCCTCCCAGGTGGAGTACACG GCAGACTCGACCGTGGCAGCCATGTATTACAGCTACTACATGCTACCGGACGGCACTTACTGCCTGGCGCCGCCCCCTCCCGGAATCGAC GTGACTACTTACTACAGCACCCTTCCTGCTGGCGTGACCGTGTCTAACTCCCCTGGAGTGACGACCACCGCCCCACCACCTCCTGGGACC ACACCACTACCGCCCCCAACCACAGCAGAGACTAGCAGCGGGGCCACCTCCACAACCACCACCACAAGTGCACTTGCCCCCGTGGCCGCC ATCATCCCCCCGCCCCCCGACGTCCAGCCCGTGATTGACAAGCTGGCCGAGTATGTCGCCAGGAACGGCCTGAAGTTCGAGACCAGTGTT CGTGCCAAGAATGATCAAAGATTTGAGTTCCTGCAGCCGTGGCACCAGTATAATGCTTATTATGAGTTTAAGAAGCAGTTCTTCCTCCAG AAAGAAGGGGGCGATAGCATGCAGGCTGTGTCTGCACCAGAAGAGGCTCCCACAGACTCTGCTCCCGAGAAGCCAAGTGATGCTGGGGAG GATGGCGCGCCTGAAGACGCAGCCGAGGTGGGAGCACGGGCAGGCTCAGGCGGGAAGAAGGAGGCATCGTCCAGTAAGACCGTCCCGGAC GGGAAGCTGGTGAAAGCTTCCTTTGCTCCAATAAGCTTTGCAATCAAGGCCAAAGAAAATGATCTGCTTCCCCTGGAAAAAAATCGTGTT AAGCTAGATGATGACAGTGATGATGATGAAGAAAGCAAAGAAGGCCAAGAAAGTTCTAGTAGTGCTGCAAACACTAACCCAGCAGTTGCC CCACCCTGTGTAGTTGTTGAGGAGAAGAAGCCTCAACTTACCCAGGAGGAGCTAGAAGCAAAGCAAGCAAAGCAAAAGCTGGAAGATCGC CTCGCAGCTGCTGCCCGGGAAAAGCTGGCCCAGGCGTCTAAGGAGTCAAAAGAGAAACAGCTTCAAGCAGAACGTAAAAGGAAAGCGGCG TTATTTTTACAGACCCTCAAAAATCCTCTGCCGGAAGCAGAAGCTGGGAAAATTGAGGAGAGTCCTTTCAGTGTCGAGGAATCCAGCACT ACGCCCTGCCCTCTACTGACTGGAGGCAGGCCTCTGCCTACTTTAGAAGTTAAACCACCCGATAGGCCTTCGAGCAAAAGCAAAGATCCA CCGAGAGAAGAAGAGAAAGAAAAGAAAAAGAAAAAGCACAAAAAAAGATCTCGAACAAGATCACGTTCTCCCAAGTACCATTCGTCATCC AAGTCCAGGTCTAGATCACACTCAAAAGCAAAGCATTCTCTTCCCAGTGCCTATCGGACAGTGCGGCGGTCGAGGTCCCGCTCCCGGTCC CCTCGGAGGAGAGCCCACTCCCCTGAGAGACGGAGGGAAGAGAGGAGTGTGCCCACTGCCTACCGCGTGAGCCGCAGCCCTGGGGCCAGT AGGAAGCGGACCCGCTCCAGAAGTCCCCACGAGAAGAAGAAGAAGAGGCGGTCCCGGTCGCGGACCAAGTCCAAGGCCAGGTCTCAGTCG GTGTCACCCAGCAAGCAGGCAGCGCCCCGGCCCGCGGCCCCCGCGGCCCACTCGGCGCACTCAGCCAGCGTCTCCCCTGTGGAGAGTCGG GGCTCCAGCCAGGAGCGCTCCAGGGGAGTCTCTCAGGAAAAAGAAGCCCAGATCTCTTCAGCAATCGTTTCTTCCGTGCAGAGCAAAATC ACTCAGGATCTCATGGCCAAAGTCAGAGCGATGCTTGCAGCTTCCAAAAACCTGCAAACCAGCGCTTCCTGAGACGGGGCCAGCGGAGGC AGAGCCGGGAGGCTGCGTGGGCTTCTGGGCAGGCTCACGCAGACGCCGGCCACACCATCCACCTGGCCGCCTCCATGGACCCTTGGTGGC TTTTGTAAATTAATTTTTGATGACATTTTGAGTTTTAAGATTTCTGACCAGCAGTCTCTTACCTGTATATTTGTAAATATATCATGTTTC >79530_79530_7_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000415380_SFSWAP_chr12_132209950_ENST00000261674_length(amino acids)=825AA_BP=76 MRARSPRLCRLCRRPRLLPGAEPCEPRVGPRRADMGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKPPTAKMHAIIERTA SFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAENKSDEKKKSGVSSDNEDDDDEEDGNYLHPSLFASKK CNRLEELMKPLKVVDPDHPLAALVRKAQADSSTPTPHNADGAPVQPSQVEYTADSTVAAMYYSYYMLPDGTYCLAPPPPGIDVTTYYSTL PAGVTVSNSPGVTTTAPPPPGTTPLPPPTTAETSSGATSTTTTTSALAPVAAIIPPPPDVQPVIDKLAEYVARNGLKFETSVRAKNDQRF EFLQPWHQYNAYYEFKKQFFLQKEGGDSMQAVSAPEEAPTDSAPEKPSDAGEDGAPEDAAEVGARAGSGGKKEASSSKTVPDGKLVKASF APISFAIKAKENDLLPLEKNRVKLDDDSDDDEESKEGQESSSSAANTNPAVAPPCVVVEEKKPQLTQEELEAKQAKQKLEDRLAAAAREK LAQASKESKEKQLQAERKRKAALFLQTLKNPLPEAEAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPREEEKEK KKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPRRRAHSPERRREERSVPTAYRVSRSPGASRKRTRSRS PHEKKKKRRSRSRTKSKARSQSVSPSKQAAPRPAAPAAHSAHSASVSPVESRGSSQERSRGVSQEKEAQISSAIVSSVQSKITQDLMAKV -------------------------------------------------------------- >79530_79530_8_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000415380_SFSWAP_chr12_132209950_ENST00000541286_length(transcript)=2772nt_BP=252nt CCGGATCCACCGTGCCTCTGCGGCCTGCGTGCCCGGAGTCCCCGCCTGTGTCGTCTCTGTCGCCGTCCCCGTCTCCTGCCAGGCGCGGAG CCCTGCGAGCCGCGGGTGGGCCCCAGGCGCGCAGACATGGGCTGCTCCGCCAAAGCGCGCTGGGCTGCCGGGGCGCTGGGCGTCGCGGGG CTACTGTGCGCTGTGCTGGGCGCTGTCATGATCGTGATGGTGCCGTCGCTCATCAAGCAGCAGGTCCTTAAGCCACCAACCGCTAAAATG CACGCCATCATCGAGCGCACGGCCAGCTTCGTGTGCAGGCAGGGAGCACAGTTTGAGATCATGCTGAAGGCCAAGCAGGCCCGGAACTCC CAGTTTGACTTTCTGCGCTTCGACCACTACCTCAACCCCTACTATAAGTTCATCCAGAAAGCCATGAAAGAGGGACGCTACACTGTCCTG GCAGAAAACAAAAGTGACGAGAAAAAAAAATCAGGAGTCAGCTCTGACAATGAAGATGATGATGATGAAGAAGATGGGAATTACCTTCAT CCCTCTCTCTTTGCCTCCAAGAAGTGTAACCGCCTTGAAGAGCTGATGAAGCCCTTGAAGGTAGTGGACCCAGATCATCCCCTCGCAGCA CTTGTTCGTAAGGCACAGGCTGACAGTTCCACTCCCACCCCACACAACGCAGACGGTGCGCCTGTGCAGCCCTCCCAGGTGGAGTACACG GCAGACTCGACCGTGGCAGCCATGTATTACAGCTACTACATGCTACCGGACGGCACTTACTGCCTGGCGCCGCCCCCTCCCGGAATCGAC GTGACTACTTACTACAGCACCCTTCCTGCTGGCGTGACCGTGTCTAACTCCCCTGGAGTGACGACCACCGCCCCACCACCTCCTGGGACC ACACCACTACCGCCCCCAACCACAGCAGAGACTAGCAGCGGGGCCACCTCCACAACCACCACCACAAGTGCACTTGCCCCCGTGGCCGCC ATCATCCCCCCGCCCCCCGACGTCCAGCCCGTGATTGACAAGCTGGCCGAGTATGTCGCCAGGAACGGCCTGAAGTTCGAGACCAGTGTT CGTGCCAAGAATGATCAAAGATTTGAGTTCCTGCAGCCGTGGCACCAGTATAATGCTTATTATGAGTTTAAGAAGCAGTTCTTCCTCCAG AAAGAAGGGGGCGATAGCATGCAGGCTGTGTCTGCACCAGAAGAGGCTCCCACAGACTCTGCTCCCGAGAAGCCAAGTGATGCTGGGGAG GATGGCGCGCCTGAAGACGCAGCCGAGGTGGGAGCACGGGCAGGCTCAGGCGGGAAGAAGGAGGCATCGTCCAGTAAGACCGTCCCGGAC GGGAAGCTGGTGAAAGCTTCCTTTGCTCCAATAAGCTTTGCAATCAAGGCCAAAGAAAATGATCTGCTTCCCCTGGAAAAAAATCGTGTT AAGCTAGATGATGACAGTGATGATGATGAAGAAAGCAAAGAAGGCCAAGAAAGTTCTAGTAGTGCTGCAAACACTAACCCAGCAGTTGCC CCACCCTGTGTAGTTGTTGAGGAGAAGAAGCCTCAACTTACCCAGGAGGAGCTAGAAGCAAAGCAAGCAAAGCAAAAGCTGGAAGATCGC CTCGCAGCTGCTGCCCGGGAAAAGCTGGCCCAGGCGTCTAAGGAGTCAAAAGAGAAACAGCTTCAAGCAGAACGTAAAAGGAAAGCGGCG TTATTTTTACAGACCCTCAAAAATCCTCTGCCGGAAGCAGAAGCTGGGAAAATTGAGGAGAGTCCTTTCAGTGTCGAGGAATCCAGCACT ACGCCCTGCCCTCTACTGACTGGAGGCAGGCCTCTGCCTACTTTAGAAGTTAAACCACCCGATAGGCCTTCGAGCAAAAGCAAAGATCCA CCGAGAGAAGAAGAGAAAGAAAAGAAAAAGAAAAAGCACAAAAAAAGATCTCGAACAAGATCACGTTCTCCCAAGTACCATTCGTCATCC AAGTCCAGGTCTAGATCACACTCAAAAGCAAAGCATTCTCTTCCCAGTGCCTATCGGACAGTGCGGCGGTCGAGAGTCACAGCCTCCCCA GGGACGCTGCGCGCGGAGCCCTGTCAGAGCAGCGCGTCAGTGACAGCGGCAGCCGAGCCAGGAAGTTATCAGGCAGCCTCGACCACCACC AGATTTGACTCCGCGAGCTCTTTTGAGGGAAAACCTGGTAAAACGTCAAGGTCCCGCTCCCGGTCCCCTCGGAGGAGAGCCCACTCCCCT GAGAGACGGAGGGAAGAGAGGAGTGTGCCCACTGCCTACCGCGTGAGCCGCAGCCCTGGGGCCAGTAGGAAGCGGACCCGCTCCAGAAGT CCCCACGAGAAGAAGAAGAAGAGGCGGTCCCGGTCGCGGACCAAGTCCAAGGCCAGGTCTCAGTCGGTGTCACCCAGCAAGCAGGCAGCG CCCCGGCCCGCGGCCCCCGCGGCCCACTCGGCGCACTCAGCCAGCGTCTCCCCTGTGGAGAGTCGGGGCTCCAGCCAGGAGCGCTCCAGG GGAGTCTCTCAGGAAAAAGAAGCCCAGATCTCTTCAGCAATCGTTTCTTCCGTGCAGAGCAAAATCACTCAGGATCTCATGGCCAAAGTC AGAGCGATGCTTGCAGCTTCCAAAAACCTGCAAACCAGCGCTTCCTGAGACGGGGCCAGCGGAGGCAGAGCCGGGAGGCTGCGTGGGCTT >79530_79530_8_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000415380_SFSWAP_chr12_132209950_ENST00000541286_length(amino acids)=877AA_BP=76 MRARSPRLCRLCRRPRLLPGAEPCEPRVGPRRADMGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKPPTAKMHAIIERTA SFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAENKSDEKKKSGVSSDNEDDDDEEDGNYLHPSLFASKK CNRLEELMKPLKVVDPDHPLAALVRKAQADSSTPTPHNADGAPVQPSQVEYTADSTVAAMYYSYYMLPDGTYCLAPPPPGIDVTTYYSTL PAGVTVSNSPGVTTTAPPPPGTTPLPPPTTAETSSGATSTTTTTSALAPVAAIIPPPPDVQPVIDKLAEYVARNGLKFETSVRAKNDQRF EFLQPWHQYNAYYEFKKQFFLQKEGGDSMQAVSAPEEAPTDSAPEKPSDAGEDGAPEDAAEVGARAGSGGKKEASSSKTVPDGKLVKASF APISFAIKAKENDLLPLEKNRVKLDDDSDDDEESKEGQESSSSAANTNPAVAPPCVVVEEKKPQLTQEELEAKQAKQKLEDRLAAAAREK LAQASKESKEKQLQAERKRKAALFLQTLKNPLPEAEAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPREEEKEK KKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRVTASPGTLRAEPCQSSASVTAAAEPGSYQAASTTTRFDSASSF EGKPGKTSRSRSRSPRRRAHSPERRREERSVPTAYRVSRSPGASRKRTRSRSPHEKKKKRRSRSRTKSKARSQSVSPSKQAAPRPAAPAA -------------------------------------------------------------- >79530_79530_9_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000546215_SFSWAP_chr12_132209950_ENST00000261674_length(transcript)=2688nt_BP=189nt CGTCCCCGTCTCCTGCCAGGCGCGGAGCCCTGCGAGCCGCGGGTGGGCCCCAGGCGCGCAGACATGGGCTGCTCCGCCAAAGCGCGCTGG GCTGCCGGGGCGCTGGGCGTCGCGGGGCTACTGTGCGCTGTGCTGGGCGCTGTCATGATCGTGATGGTGCCGTCGCTCATCAAGCAGCAG GTCCTTAAGCCACCAACCGCTAAAATGCACGCCATCATCGAGCGCACGGCCAGCTTCGTGTGCAGGCAGGGAGCACAGTTTGAGATCATG CTGAAGGCCAAGCAGGCCCGGAACTCCCAGTTTGACTTTCTGCGCTTCGACCACTACCTCAACCCCTACTATAAGTTCATCCAGAAAGCC ATGAAAGAGGGACGCTACACTGTCCTGGCAGAAAACAAAAGTGACGAGAAAAAAAAATCAGGAGTCAGCTCTGACAATGAAGATGATGAT GATGAAGAAGATGGGAATTACCTTCATCCCTCTCTCTTTGCCTCCAAGAAGTGTAACCGCCTTGAAGAGCTGATGAAGCCCTTGAAGGTA GTGGACCCAGATCATCCCCTCGCAGCACTTGTTCGTAAGGCACAGGCTGACAGTTCCACTCCCACCCCACACAACGCAGACGGTGCGCCT GTGCAGCCCTCCCAGGTGGAGTACACGGCAGACTCGACCGTGGCAGCCATGTATTACAGCTACTACATGCTACCGGACGGCACTTACTGC CTGGCGCCGCCCCCTCCCGGAATCGACGTGACTACTTACTACAGCACCCTTCCTGCTGGCGTGACCGTGTCTAACTCCCCTGGAGTGACG ACCACCGCCCCACCACCTCCTGGGACCACACCACTACCGCCCCCAACCACAGCAGAGACTAGCAGCGGGGCCACCTCCACAACCACCACC ACAAGTGCACTTGCCCCCGTGGCCGCCATCATCCCCCCGCCCCCCGACGTCCAGCCCGTGATTGACAAGCTGGCCGAGTATGTCGCCAGG AACGGCCTGAAGTTCGAGACCAGTGTTCGTGCCAAGAATGATCAAAGATTTGAGTTCCTGCAGCCGTGGCACCAGTATAATGCTTATTAT GAGTTTAAGAAGCAGTTCTTCCTCCAGAAAGAAGGGGGCGATAGCATGCAGGCTGTGTCTGCACCAGAAGAGGCTCCCACAGACTCTGCT CCCGAGAAGCCAAGTGATGCTGGGGAGGATGGCGCGCCTGAAGACGCAGCCGAGGTGGGAGCACGGGCAGGCTCAGGCGGGAAGAAGGAG GCATCGTCCAGTAAGACCGTCCCGGACGGGAAGCTGGTGAAAGCTTCCTTTGCTCCAATAAGCTTTGCAATCAAGGCCAAAGAAAATGAT CTGCTTCCCCTGGAAAAAAATCGTGTTAAGCTAGATGATGACAGTGATGATGATGAAGAAAGCAAAGAAGGCCAAGAAAGTTCTAGTAGT GCTGCAAACACTAACCCAGCAGTTGCCCCACCCTGTGTAGTTGTTGAGGAGAAGAAGCCTCAACTTACCCAGGAGGAGCTAGAAGCAAAG CAAGCAAAGCAAAAGCTGGAAGATCGCCTCGCAGCTGCTGCCCGGGAAAAGCTGGCCCAGGCGTCTAAGGAGTCAAAAGAGAAACAGCTT CAAGCAGAACGTAAAAGGAAAGCGGCGTTATTTTTACAGACCCTCAAAAATCCTCTGCCGGAAGCAGAAGCTGGGAAAATTGAGGAGAGT CCTTTCAGTGTCGAGGAATCCAGCACTACGCCCTGCCCTCTACTGACTGGAGGCAGGCCTCTGCCTACTTTAGAAGTTAAACCACCCGAT AGGCCTTCGAGCAAAAGCAAAGATCCACCGAGAGAAGAAGAGAAAGAAAAGAAAAAGAAAAAGCACAAAAAAAGATCTCGAACAAGATCA CGTTCTCCCAAGTACCATTCGTCATCCAAGTCCAGGTCTAGATCACACTCAAAAGCAAAGCATTCTCTTCCCAGTGCCTATCGGACAGTG CGGCGGTCGAGGTCCCGCTCCCGGTCCCCTCGGAGGAGAGCCCACTCCCCTGAGAGACGGAGGGAAGAGAGGAGTGTGCCCACTGCCTAC CGCGTGAGCCGCAGCCCTGGGGCCAGTAGGAAGCGGACCCGCTCCAGAAGTCCCCACGAGAAGAAGAAGAAGAGGCGGTCCCGGTCGCGG ACCAAGTCCAAGGCCAGGTCTCAGTCGGTGTCACCCAGCAAGCAGGCAGCGCCCCGGCCCGCGGCCCCCGCGGCCCACTCGGCGCACTCA GCCAGCGTCTCCCCTGTGGAGAGTCGGGGCTCCAGCCAGGAGCGCTCCAGGGGAGTCTCTCAGGAAAAAGAAGCCCAGATCTCTTCAGCA ATCGTTTCTTCCGTGCAGAGCAAAATCACTCAGGATCTCATGGCCAAAGTCAGAGCGATGCTTGCAGCTTCCAAAAACCTGCAAACCAGC GCTTCCTGAGACGGGGCCAGCGGAGGCAGAGCCGGGAGGCTGCGTGGGCTTCTGGGCAGGCTCACGCAGACGCCGGCCACACCATCCACC TGGCCGCCTCCATGGACCCTTGGTGGCTTTTGTAAATTAATTTTTGATGACATTTTGAGTTTTAAGATTTCTGACCAGCAGTCTCTTACC >79530_79530_9_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000546215_SFSWAP_chr12_132209950_ENST00000261674_length(amino acids)=808AA_BP=59 MPGAEPCEPRVGPRRADMGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKPPTAKMHAIIERTASFVCRQGAQFEIMLKAK QARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAENKSDEKKKSGVSSDNEDDDDEEDGNYLHPSLFASKKCNRLEELMKPLKVVDPD HPLAALVRKAQADSSTPTPHNADGAPVQPSQVEYTADSTVAAMYYSYYMLPDGTYCLAPPPPGIDVTTYYSTLPAGVTVSNSPGVTTTAP PPPGTTPLPPPTTAETSSGATSTTTTTSALAPVAAIIPPPPDVQPVIDKLAEYVARNGLKFETSVRAKNDQRFEFLQPWHQYNAYYEFKK QFFLQKEGGDSMQAVSAPEEAPTDSAPEKPSDAGEDGAPEDAAEVGARAGSGGKKEASSSKTVPDGKLVKASFAPISFAIKAKENDLLPL EKNRVKLDDDSDDDEESKEGQESSSSAANTNPAVAPPCVVVEEKKPQLTQEELEAKQAKQKLEDRLAAAAREKLAQASKESKEKQLQAER KRKAALFLQTLKNPLPEAEAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPREEEKEKKKKKHKKRSRTRSRSPK YHSSSKSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPRRRAHSPERRREERSVPTAYRVSRSPGASRKRTRSRSPHEKKKKRRSRSRTKSK -------------------------------------------------------------- >79530_79530_10_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000546215_SFSWAP_chr12_132209950_ENST00000541286_length(transcript)=2709nt_BP=189nt CGTCCCCGTCTCCTGCCAGGCGCGGAGCCCTGCGAGCCGCGGGTGGGCCCCAGGCGCGCAGACATGGGCTGCTCCGCCAAAGCGCGCTGG GCTGCCGGGGCGCTGGGCGTCGCGGGGCTACTGTGCGCTGTGCTGGGCGCTGTCATGATCGTGATGGTGCCGTCGCTCATCAAGCAGCAG GTCCTTAAGCCACCAACCGCTAAAATGCACGCCATCATCGAGCGCACGGCCAGCTTCGTGTGCAGGCAGGGAGCACAGTTTGAGATCATG CTGAAGGCCAAGCAGGCCCGGAACTCCCAGTTTGACTTTCTGCGCTTCGACCACTACCTCAACCCCTACTATAAGTTCATCCAGAAAGCC ATGAAAGAGGGACGCTACACTGTCCTGGCAGAAAACAAAAGTGACGAGAAAAAAAAATCAGGAGTCAGCTCTGACAATGAAGATGATGAT GATGAAGAAGATGGGAATTACCTTCATCCCTCTCTCTTTGCCTCCAAGAAGTGTAACCGCCTTGAAGAGCTGATGAAGCCCTTGAAGGTA GTGGACCCAGATCATCCCCTCGCAGCACTTGTTCGTAAGGCACAGGCTGACAGTTCCACTCCCACCCCACACAACGCAGACGGTGCGCCT GTGCAGCCCTCCCAGGTGGAGTACACGGCAGACTCGACCGTGGCAGCCATGTATTACAGCTACTACATGCTACCGGACGGCACTTACTGC CTGGCGCCGCCCCCTCCCGGAATCGACGTGACTACTTACTACAGCACCCTTCCTGCTGGCGTGACCGTGTCTAACTCCCCTGGAGTGACG ACCACCGCCCCACCACCTCCTGGGACCACACCACTACCGCCCCCAACCACAGCAGAGACTAGCAGCGGGGCCACCTCCACAACCACCACC ACAAGTGCACTTGCCCCCGTGGCCGCCATCATCCCCCCGCCCCCCGACGTCCAGCCCGTGATTGACAAGCTGGCCGAGTATGTCGCCAGG AACGGCCTGAAGTTCGAGACCAGTGTTCGTGCCAAGAATGATCAAAGATTTGAGTTCCTGCAGCCGTGGCACCAGTATAATGCTTATTAT GAGTTTAAGAAGCAGTTCTTCCTCCAGAAAGAAGGGGGCGATAGCATGCAGGCTGTGTCTGCACCAGAAGAGGCTCCCACAGACTCTGCT CCCGAGAAGCCAAGTGATGCTGGGGAGGATGGCGCGCCTGAAGACGCAGCCGAGGTGGGAGCACGGGCAGGCTCAGGCGGGAAGAAGGAG GCATCGTCCAGTAAGACCGTCCCGGACGGGAAGCTGGTGAAAGCTTCCTTTGCTCCAATAAGCTTTGCAATCAAGGCCAAAGAAAATGAT CTGCTTCCCCTGGAAAAAAATCGTGTTAAGCTAGATGATGACAGTGATGATGATGAAGAAAGCAAAGAAGGCCAAGAAAGTTCTAGTAGT GCTGCAAACACTAACCCAGCAGTTGCCCCACCCTGTGTAGTTGTTGAGGAGAAGAAGCCTCAACTTACCCAGGAGGAGCTAGAAGCAAAG CAAGCAAAGCAAAAGCTGGAAGATCGCCTCGCAGCTGCTGCCCGGGAAAAGCTGGCCCAGGCGTCTAAGGAGTCAAAAGAGAAACAGCTT CAAGCAGAACGTAAAAGGAAAGCGGCGTTATTTTTACAGACCCTCAAAAATCCTCTGCCGGAAGCAGAAGCTGGGAAAATTGAGGAGAGT CCTTTCAGTGTCGAGGAATCCAGCACTACGCCCTGCCCTCTACTGACTGGAGGCAGGCCTCTGCCTACTTTAGAAGTTAAACCACCCGAT AGGCCTTCGAGCAAAAGCAAAGATCCACCGAGAGAAGAAGAGAAAGAAAAGAAAAAGAAAAAGCACAAAAAAAGATCTCGAACAAGATCA CGTTCTCCCAAGTACCATTCGTCATCCAAGTCCAGGTCTAGATCACACTCAAAAGCAAAGCATTCTCTTCCCAGTGCCTATCGGACAGTG CGGCGGTCGAGAGTCACAGCCTCCCCAGGGACGCTGCGCGCGGAGCCCTGTCAGAGCAGCGCGTCAGTGACAGCGGCAGCCGAGCCAGGA AGTTATCAGGCAGCCTCGACCACCACCAGATTTGACTCCGCGAGCTCTTTTGAGGGAAAACCTGGTAAAACGTCAAGGTCCCGCTCCCGG TCCCCTCGGAGGAGAGCCCACTCCCCTGAGAGACGGAGGGAAGAGAGGAGTGTGCCCACTGCCTACCGCGTGAGCCGCAGCCCTGGGGCC AGTAGGAAGCGGACCCGCTCCAGAAGTCCCCACGAGAAGAAGAAGAAGAGGCGGTCCCGGTCGCGGACCAAGTCCAAGGCCAGGTCTCAG TCGGTGTCACCCAGCAAGCAGGCAGCGCCCCGGCCCGCGGCCCCCGCGGCCCACTCGGCGCACTCAGCCAGCGTCTCCCCTGTGGAGAGT CGGGGCTCCAGCCAGGAGCGCTCCAGGGGAGTCTCTCAGGAAAAAGAAGCCCAGATCTCTTCAGCAATCGTTTCTTCCGTGCAGAGCAAA ATCACTCAGGATCTCATGGCCAAAGTCAGAGCGATGCTTGCAGCTTCCAAAAACCTGCAAACCAGCGCTTCCTGAGACGGGGCCAGCGGA GGCAGAGCCGGGAGGCTGCGTGGGCTTCTGGGCAGGCTCACGCAGACGCCGGCCACACCATCCACCTGGCCGCCTCCATGGACCCTTGGT >79530_79530_10_SCARB1-SFSWAP_SCARB1_chr12_125348141_ENST00000546215_SFSWAP_chr12_132209950_ENST00000541286_length(amino acids)=860AA_BP=59 MPGAEPCEPRVGPRRADMGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKPPTAKMHAIIERTASFVCRQGAQFEIMLKAK QARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAENKSDEKKKSGVSSDNEDDDDEEDGNYLHPSLFASKKCNRLEELMKPLKVVDPD HPLAALVRKAQADSSTPTPHNADGAPVQPSQVEYTADSTVAAMYYSYYMLPDGTYCLAPPPPGIDVTTYYSTLPAGVTVSNSPGVTTTAP PPPGTTPLPPPTTAETSSGATSTTTTTSALAPVAAIIPPPPDVQPVIDKLAEYVARNGLKFETSVRAKNDQRFEFLQPWHQYNAYYEFKK QFFLQKEGGDSMQAVSAPEEAPTDSAPEKPSDAGEDGAPEDAAEVGARAGSGGKKEASSSKTVPDGKLVKASFAPISFAIKAKENDLLPL EKNRVKLDDDSDDDEESKEGQESSSSAANTNPAVAPPCVVVEEKKPQLTQEELEAKQAKQKLEDRLAAAAREKLAQASKESKEKQLQAER KRKAALFLQTLKNPLPEAEAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPREEEKEKKKKKHKKRSRTRSRSPK YHSSSKSRSRSHSKAKHSLPSAYRTVRRSRVTASPGTLRAEPCQSSASVTAAAEPGSYQAASTTTRFDSASSFEGKPGKTSRSRSRSPRR RAHSPERRREERSVPTAYRVSRSPGASRKRTRSRSPHEKKKKRRSRSRTKSKARSQSVSPSKQAAPRPAAPAAHSAHSASVSPVESRGSS -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for SCARB1-SFSWAP |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for SCARB1-SFSWAP |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for SCARB1-SFSWAP |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |