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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:SH3RF1-NEK1 (FusionGDB2 ID:81525)

Fusion Gene Summary for SH3RF1-NEK1

check button Fusion gene summary
Fusion gene informationFusion gene name: SH3RF1-NEK1
Fusion gene ID: 81525
HgeneTgene
Gene symbol

SH3RF1

NEK1

Gene ID

57630

4750

Gene nameSH3 domain containing ring finger 1NIMA related kinase 1
SynonymsPOSH|RNF142|SH3MD2ALS24|NY-REN-55|SRPS2|SRPS2A|SRTD6
Cytomap

4q32.3-q33

4q33

Type of geneprotein-codingprotein-coding
DescriptionE3 ubiquitin-protein ligase SH3RF1RING-type E3 ubiquitin transferase SH3RF1SH3 domain-containing RING finger protein 1SH3 multiple domains 2SH3 multiple domains protein 2plenty of SH3 domainsplenty of SH3sputative E3 ubiquitin-protein ligase SH3RF1serine/threonine-protein kinase Nek1NIMA (never in mitosis gene a)-related kinase 1never in mitosis A-related kinase 1nimA-related protein kinase 1protein-serine/threonine kinaserenal carcinoma antigen NY-REN-55
Modification date2020031320200329
UniProtAcc.

Q8NG66

Ensembl transtripts involved in fusion geneENST00000508685, ENST00000284637, 
ENST00000439128, ENST00000507142, 
ENST00000510533, ENST00000511633, 
ENST00000512193, 
Fusion gene scores* DoF score10 X 8 X 5=4001 X 1 X 1=1
# samples 101
** MAII scorelog2(10/400*10)=-2
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(1/1*10)=3.32192809488736
Context

PubMed: SH3RF1 [Title/Abstract] AND NEK1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointSH3RF1(170037420)-NEK1(170327898), # samples:2
Anticipated loss of major functional domain due to fusion event.SH3RF1-NEK1 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF.
SH3RF1-NEK1 seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF.
SH3RF1-NEK1 seems lost the major protein functional domain in Tgene partner, which is a kinase due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneNEK1

GO:0006468

protein phosphorylation

19158487


check buttonFusion gene breakpoints across SH3RF1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across NEK1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4KIRPTCGA-G7-6793-01ASH3RF1chr4

170037420

-NEK1chr4

170327898

-
ChimerDB4KIRPTCGA-G7-6793SH3RF1chr4

170037420

-NEK1chr4

170327898

-


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Fusion Gene ORF analysis for SH3RF1-NEK1

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
Frame-shiftENST00000508685ENST00000439128SH3RF1chr4

170037420

-NEK1chr4

170327898

-
Frame-shiftENST00000508685ENST00000507142SH3RF1chr4

170037420

-NEK1chr4

170327898

-
Frame-shiftENST00000508685ENST00000510533SH3RF1chr4

170037420

-NEK1chr4

170327898

-
Frame-shiftENST00000508685ENST00000511633SH3RF1chr4

170037420

-NEK1chr4

170327898

-
Frame-shiftENST00000508685ENST00000512193SH3RF1chr4

170037420

-NEK1chr4

170327898

-
In-frameENST00000284637ENST00000439128SH3RF1chr4

170037420

-NEK1chr4

170327898

-
In-frameENST00000284637ENST00000507142SH3RF1chr4

170037420

-NEK1chr4

170327898

-
In-frameENST00000284637ENST00000510533SH3RF1chr4

170037420

-NEK1chr4

170327898

-
In-frameENST00000284637ENST00000511633SH3RF1chr4

170037420

-NEK1chr4

170327898

-
In-frameENST00000284637ENST00000512193SH3RF1chr4

170037420

-NEK1chr4

170327898

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000284637SH3RF1chr4170037420-ENST00000439128NEK1chr4170327898-435524813423119925
ENST00000284637SH3RF1chr4170037420-ENST00000511633NEK1chr4170327898-434924813423119925
ENST00000284637SH3RF1chr4170037420-ENST00000510533NEK1chr4170327898-424024813423119925
ENST00000284637SH3RF1chr4170037420-ENST00000507142NEK1chr4170327898-423524813423119925
ENST00000284637SH3RF1chr4170037420-ENST00000512193NEK1chr4170327898-340224813423119925

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000284637ENST00000439128SH3RF1chr4170037420-NEK1chr4170327898-0.0008306440.99916935
ENST00000284637ENST00000511633SH3RF1chr4170037420-NEK1chr4170327898-0.0008475730.9991524
ENST00000284637ENST00000510533SH3RF1chr4170037420-NEK1chr4170327898-0.0010093810.9989906
ENST00000284637ENST00000507142SH3RF1chr4170037420-NEK1chr4170327898-0.0009666250.99903345
ENST00000284637ENST00000512193SH3RF1chr4170037420-NEK1chr4170327898-0.0028648840.99713516

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Fusion Genomic Features for SH3RF1-NEK1


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for SH3RF1-NEK1


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr4:170037420/chr4:170327898)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.NEK1

Q8NG66

FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Protein kinase which plays an important role in the G2/M checkpoint response to DNA damage. Controls degradation of CDC25A by directly phosphorylating it on residues whose phosphorylation is required for BTRC-mediated polyubiquitination and degradation. {ECO:0000269|PubMed:12154088, ECO:0000269|PubMed:19734889, ECO:0000269|PubMed:20090422}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSH3RF1chr4:170037420chr4:170327898ENST00000284637-1012397_403713889.0Compositional biasNote=Poly-Pro
HgeneSH3RF1chr4:170037420chr4:170327898ENST00000284637-1012417_424713889.0Compositional biasNote=Poly-Ala
HgeneSH3RF1chr4:170037420chr4:170327898ENST00000284637-1012657_662713889.0Compositional biasNote=Poly-Ala
HgeneSH3RF1chr4:170037420chr4:170327898ENST00000284637-1012134_193713889.0DomainSH3 1
HgeneSH3RF1chr4:170037420chr4:170327898ENST00000284637-1012196_259713889.0DomainSH3 2
HgeneSH3RF1chr4:170037420chr4:170327898ENST00000284637-1012445_506713889.0DomainSH3 3
HgeneSH3RF1chr4:170037420chr4:170327898ENST00000284637-101212_53713889.0Zinc fingerRING-type

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSH3RF1chr4:170037420chr4:170327898ENST00000284637-1012829_888713889.0DomainSH3 4
TgeneNEK1chr4:170037420chr4:170327898ENST0000043912828344_25810461259.0DomainProtein kinase
TgeneNEK1chr4:170037420chr4:170327898ENST0000050714230364_25810741287.0DomainProtein kinase
TgeneNEK1chr4:170037420chr4:170327898ENST0000051053327334_25810021215.0DomainProtein kinase
TgeneNEK1chr4:170037420chr4:170327898ENST0000051163329354_25810301243.0DomainProtein kinase
TgeneNEK1chr4:170037420chr4:170327898ENST0000051219327334_2589771190.0DomainProtein kinase
TgeneNEK1chr4:170037420chr4:170327898ENST00000439128283410_1810461259.0Nucleotide bindingATP
TgeneNEK1chr4:170037420chr4:170327898ENST00000507142303610_1810741287.0Nucleotide bindingATP
TgeneNEK1chr4:170037420chr4:170327898ENST00000510533273310_1810021215.0Nucleotide bindingATP
TgeneNEK1chr4:170037420chr4:170327898ENST00000511633293510_1810301243.0Nucleotide bindingATP
TgeneNEK1chr4:170037420chr4:170327898ENST00000512193273310_189771190.0Nucleotide bindingATP


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Fusion Gene Sequence for SH3RF1-NEK1


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>81525_81525_1_SH3RF1-NEK1_SH3RF1_chr4_170037420_ENST00000284637_NEK1_chr4_170327898_ENST00000439128_length(transcript)=4355nt_BP=2481nt
CGCCCCGGGCGCCGGCTGCGTCCCGGCCTCCTCCTCCTCTTCCTCCGCCCTCCTTGGCTGGGAAAGTGGGAGGCGGCGGCGGCGGCGTGG
TGTGTGTGCGCGCGTGAGGGGGGCAGCAGAGAGGAGTCTCCCGGTGCCGCCGCGGCGTCAGAGACACTGCGAGCGGCGAGCGCGGTGGGG
CCGCATCTGCATCAGCCGCCGCAGCCGCTGCGGGGCCGCGAACAAAGAGGAGGAGCCGAGGCGCGAGAGCAAAGTCTGAAATGGATGTTA
CATGAGTCATTTTAAGGGATGCACACAACTATGAACATTTCTGAAGATTTTTTCTCAGTAAAGTAGATAAAGATGGATGAATCAGCCTTG
TTGGATCTTTTGGAGTGTCCGGTGTGTCTAGAGCGCCTTGATGCTTCTGCGAAGGTCTTGCCTTGCCAGCATACGTTTTGCAAGCGATGT
TTGCTGGGGATCGTAGGTTCTCGAAATGAACTCAGATGTCCCGAGTGCAGGACTCTTGTTGGCTCGGGTGTCGAGGAGCTTCCCAGTAAC
ATCTTGCTGGTCAGACTTCTGGATGGCATCAAACAGAGGCCTTGGAAACCTGGTCCTGGTGGGGGAAGTGGGACCAACTGCACAAATGCA
TTAAGGTCTCAGAGCAGCACTGTGGCTAATTGTAGCTCAAAAGATCTGCAGAGCTCCCAGGGCGGACAGCAGCCTCGGGTGCAATCCTGG
AGCCCCCCAGTGAGGGGTATACCTCAGTTACCATGTGCCAAAGCATTATACAACTATGAAGGAAAAGAGCCTGGAGACCTTAAATTCAGC
AAAGGTGACATCATCATTTTGCGAAGACAAGTGGATGAAAATTGGTACCATGGGGAAGTCAATGGAATCCATGGCTTTTTCCCCACCAAC
TTTGTGCAGATTATTAAACCGTTACCTCAGCCCCCACCTCAGTGCAAAGCACTTTATGACTTTGAAGTGAAAGACAAGGAAGCAGACAAA
GATTGCCTTCCATTTGCAAAGGATGATGTTCTGACTGTGATCCGAAGAGTGGATGAAAACTGGGCTGAAGGAATGCTGGCAGACAAAATA
GGAATATTTCCAATTTCATATGTTGAGTTTAACTCGGCTGCTAAGCAGCTGATAGAATGGGATAAGCCTCCTGTGCCAGGAGTTGATGCT
GGAGAATGTTCCTCGGCAGCAGCCCAGAGCAGCACTGCCCCAAAGCACTCCGACACCAAGAAGAACACCAAAAAGCGGCACTCCTTCACT
TCCCTCACTATGGCCAACAAGTCCTCCCAGGCATCCCAGAACCGCCACTCCATGGAGATCAGCCCCCCTGTCCTCATCAGCTCCAGCAAC
CCCACTGCTGCTGCACGGATCAGCGAGCTGTCTGGGCTCTCCTGCAGTGCCCCTTCTCAGGTTCATATAAGTACCACCGGGTTAATTGTG
ACCCCGCCCCCAAGCAGCCCAGTGACAACTGGCCCCTCGTTTACTTTCCCATCAGATGTTCCCTACCAAGCTGCCCTTGGAACTTTGAAT
CCTCCTCTTCCACCACCCCCTCTCCTGGCTGCCACTGTCCTTGCCTCCACACCACCAGGCGCCACCGCCGCTGCTGCTGCTGCTGGAATG
GGACCGAGGCCCATGGCAGGATCCACTGACCAGATTGCACATTTACGGCCGCAGACTCGCCCCAGTGTGTATGTTGCTATATATCCATAC
ACTCCTCGGAAAGAGGATGAACTAGAGCTGAGAAAAGGGGAGATGTTTTTAGTGTTTGAGCGCTGCCAGGATGGCTGGTTCAAAGGGACA
TCCATGCATACCAGCAAGATAGGGGTTTTCCCTGGCAATTATGTGGCACCAGTCACAAGGGCGGTGACAAATGCTTCCCAAGCTAAAGTC
CCTATGTCTACAGCTGGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAAT
GGCGTGGCTGGGAGTCCCAGTGTTGTCCCCGCAGCTGTGGTATCAGCAGCTCACATCCAGACAAGTCCTCAGGCTAAGGTCTTGTTGCAC
ATGACGGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACA
CCCATCCAGGTACAGAATGCCGCCGGCCTCAGCCCTGCATCTGTGGGCCTGTCCCATCACTCGCTGGCCTCCCCACAACCTGCGCCTCTG
ATGCCAGGCTCAGCCACGCACACTGCTGCCATCAGTATCAGTCGAGCCAGTGCCCCTCTGGCCTGTGCAGCAGCTGCTCCACTGACTTCC
CCAAGCATCACCAGTGCTTCTCTGGAGGCTGAGCCCAGTGGCCGGATAGTGACCGTTCTCCCTGGACTCCCCACATCTCCTGACAGTGCT
TCATCAGCTTGTGGGAACAGTTCAGCAACCAAACCAGACAAGGATAGCAAAATGTTAAGGACATGTTCACTTCCAGATCTCTCAAAGCTG
TTCAGAACCCTTATGGATGTTCCCACCGTAGGAGATGTTCGTCAAGACAATCTTGAAATAGATGAAATTGAAGATGAAAACATTAAAGAA
GGACCTTCTGATTCTGAAGACATTGTGTTTGAAGAAACTGACACAGATTTACAAGAGCTGCAGGCCTCGATGGAACAGTTACTTAGGGAA
CAACCTGGTGAAGAATACAGTGAAGAAGAAGAGTCAGTCTTGAAGAACAGTGATGTGGAGCCAACTGCAAATGGGACAGATGTGGCAGAT
GAAGATGACAATCCCAGCAGTGAAAGTGCCCTGAACGAAGAATGGCACTCAGATAACAGTGATGGTGAAATTGCTAGTGAATGTGAATGC
GATAGTGTCTTTAACCATTTAGAGGAACTGAGACTTCATCTGGAGCAGGAAATGGGCTTTGAAAAATTCTTTGAGGTTTATGAGAAAATA
AAGGCTATTCATGAAGATGAAGATGAAAATATTGAAATTTGTTCAAAAATAGTTCAAAATATTTTGGGAAATGAACATCAGCATCTTTAT
GCCAAGATTCTTCATTTAGTCATGGCAGATGGAGCCTACCAAGAAGATAATGATGAATAATCCTCAAAATGTTTTTTAATCCTCAACTAT
ATGAAAGCATTTGAATTTGGCTTATCAGAATAACAAGCTTCAGTGGGAAATACAGCAATTATTTATTTAAAAAATCAGATTTAAGATGGA
CTTTCTTATTGCATGAAAAAGATGGAGAAACATGCCATTTTTCAGTGAAGATTCTAATATTTTATCTATTTTGTTCATTGAATTCCATGG
TTAAATCTCATAAAATATATACTTTATTAAATCATCCAACCAAAGCATAGGAAACATTGACCCAGAACCTGACTTAATGGTTTTGAAGAT
TTACTATGCAATAGGGTAACTTTGAGTTTCAGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTGGTTTTT
CAATGGAGTCTTTAAGCATGATCTTTTTTCTGTCTAGTACTTGTTTTCATTCTGGCCAGCAGTTCTACATTAAATCACCTTGTCAAGGGC
TCTGTTTACATCTATACATTTTGAAGATGAAATTTTTAGCCTTAAAGTTTATATTCTCAAGTCCTTTTACAATCAGTGTGTCTCCTGAAC
TAGCACACAGGCTGTAGAAACAGTCTTAGAAATCATTGAAAGATTTGATTATGAAAGAATAGCAAAATTATATTTCTTGACATATAAAAA
GTTGGTTTAATGCCTTTATTTCTCTTTAAGGACCAGAACCAGGAATACTATATCGAAAAATTAGTCTGTGGATTTAACACTGACTTAGCA
TATAGCTTAAAGTTGCTCTTTTGGTTTTTAACTTCCTCCATACATAAGCTTCAAGGACAATAAGATGTTAAAAAGGAGGAAATAATTATT
TTTATTTTGACACTGTGACAGTTTTGGTAACTAGGATCCTAGGGAGGGAAATGTTTGCCTGTTGAACTTCTTTCTGTTATGAGAGGATTT
AGTTAGGTCATTAAGATGTTGATCACACAGCTTCAATCACAATATGCCAAGTATAACCTGGTTTCGTTAGAGGTGTCTACAGTCCAGATG
TTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAATAAAATCTTATCT
TGCAGCACTATCAGTATGTTGAATTTATTATGTATATTATTTCTAATATCCGAAACTAAATACTTGATTTTTTAATATGTGTGTTTATTT

>81525_81525_1_SH3RF1-NEK1_SH3RF1_chr4_170037420_ENST00000284637_NEK1_chr4_170327898_ENST00000439128_length(amino acids)=925AA_BP=713
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGVEELPSNILLVRLLDGIKQRPWKPGPGGGSG
TNCTNALRSQSSTVANCSSKDLQSSQGGQQPRVQSWSPPVRGIPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGIH
GFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEFNSAAKQLIEWDKPP
VPGVDAGECSSAAAQSSTAPKHSDTKKNTKKRHSFTSLTMANKSSQASQNRHSMEISPPVLISSSNPTAAARISELSGLSCSAPSQVHIS
TTGLIVTPPPSSPVTTGPSFTFPSDVPYQAALGTLNPPLPPPPLLAATVLASTPPGATAAAAAAGMGPRPMAGSTDQIAHLRPQTRPSVY
VAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFPGNYVAPVTRAVTNASQAKVPMSTAGQTSRGVTMVSPSTAGGPA
QKLQGNGVAGSPSVVPAAVVSAAHIQTSPQAKVLLHMTGQMTVNQARNAVRTVAAHNQERPTAAVTPIQVQNAAGLSPASVGLSHHSLAS
PQPAPLMPGSATHTAAISISRASAPLACAAAAPLTSPSITSASLEAEPSGRIVTVLPGLPTSPDSASSACGNSSATKPDKDSKMLRTCSL
PDLSKLFRTLMDVPTVGDVRQDNLEIDEIEDENIKEGPSDSEDIVFEETDTDLQELQASMEQLLREQPGEEYSEEEESVLKNSDVEPTAN
GTDVADEDDNPSSESALNEEWHSDNSDGEIASECECDSVFNHLEELRLHLEQEMGFEKFFEVYEKIKAIHEDEDENIEICSKIVQNILGN

--------------------------------------------------------------
>81525_81525_2_SH3RF1-NEK1_SH3RF1_chr4_170037420_ENST00000284637_NEK1_chr4_170327898_ENST00000507142_length(transcript)=4235nt_BP=2481nt
CGCCCCGGGCGCCGGCTGCGTCCCGGCCTCCTCCTCCTCTTCCTCCGCCCTCCTTGGCTGGGAAAGTGGGAGGCGGCGGCGGCGGCGTGG
TGTGTGTGCGCGCGTGAGGGGGGCAGCAGAGAGGAGTCTCCCGGTGCCGCCGCGGCGTCAGAGACACTGCGAGCGGCGAGCGCGGTGGGG
CCGCATCTGCATCAGCCGCCGCAGCCGCTGCGGGGCCGCGAACAAAGAGGAGGAGCCGAGGCGCGAGAGCAAAGTCTGAAATGGATGTTA
CATGAGTCATTTTAAGGGATGCACACAACTATGAACATTTCTGAAGATTTTTTCTCAGTAAAGTAGATAAAGATGGATGAATCAGCCTTG
TTGGATCTTTTGGAGTGTCCGGTGTGTCTAGAGCGCCTTGATGCTTCTGCGAAGGTCTTGCCTTGCCAGCATACGTTTTGCAAGCGATGT
TTGCTGGGGATCGTAGGTTCTCGAAATGAACTCAGATGTCCCGAGTGCAGGACTCTTGTTGGCTCGGGTGTCGAGGAGCTTCCCAGTAAC
ATCTTGCTGGTCAGACTTCTGGATGGCATCAAACAGAGGCCTTGGAAACCTGGTCCTGGTGGGGGAAGTGGGACCAACTGCACAAATGCA
TTAAGGTCTCAGAGCAGCACTGTGGCTAATTGTAGCTCAAAAGATCTGCAGAGCTCCCAGGGCGGACAGCAGCCTCGGGTGCAATCCTGG
AGCCCCCCAGTGAGGGGTATACCTCAGTTACCATGTGCCAAAGCATTATACAACTATGAAGGAAAAGAGCCTGGAGACCTTAAATTCAGC
AAAGGTGACATCATCATTTTGCGAAGACAAGTGGATGAAAATTGGTACCATGGGGAAGTCAATGGAATCCATGGCTTTTTCCCCACCAAC
TTTGTGCAGATTATTAAACCGTTACCTCAGCCCCCACCTCAGTGCAAAGCACTTTATGACTTTGAAGTGAAAGACAAGGAAGCAGACAAA
GATTGCCTTCCATTTGCAAAGGATGATGTTCTGACTGTGATCCGAAGAGTGGATGAAAACTGGGCTGAAGGAATGCTGGCAGACAAAATA
GGAATATTTCCAATTTCATATGTTGAGTTTAACTCGGCTGCTAAGCAGCTGATAGAATGGGATAAGCCTCCTGTGCCAGGAGTTGATGCT
GGAGAATGTTCCTCGGCAGCAGCCCAGAGCAGCACTGCCCCAAAGCACTCCGACACCAAGAAGAACACCAAAAAGCGGCACTCCTTCACT
TCCCTCACTATGGCCAACAAGTCCTCCCAGGCATCCCAGAACCGCCACTCCATGGAGATCAGCCCCCCTGTCCTCATCAGCTCCAGCAAC
CCCACTGCTGCTGCACGGATCAGCGAGCTGTCTGGGCTCTCCTGCAGTGCCCCTTCTCAGGTTCATATAAGTACCACCGGGTTAATTGTG
ACCCCGCCCCCAAGCAGCCCAGTGACAACTGGCCCCTCGTTTACTTTCCCATCAGATGTTCCCTACCAAGCTGCCCTTGGAACTTTGAAT
CCTCCTCTTCCACCACCCCCTCTCCTGGCTGCCACTGTCCTTGCCTCCACACCACCAGGCGCCACCGCCGCTGCTGCTGCTGCTGGAATG
GGACCGAGGCCCATGGCAGGATCCACTGACCAGATTGCACATTTACGGCCGCAGACTCGCCCCAGTGTGTATGTTGCTATATATCCATAC
ACTCCTCGGAAAGAGGATGAACTAGAGCTGAGAAAAGGGGAGATGTTTTTAGTGTTTGAGCGCTGCCAGGATGGCTGGTTCAAAGGGACA
TCCATGCATACCAGCAAGATAGGGGTTTTCCCTGGCAATTATGTGGCACCAGTCACAAGGGCGGTGACAAATGCTTCCCAAGCTAAAGTC
CCTATGTCTACAGCTGGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAAT
GGCGTGGCTGGGAGTCCCAGTGTTGTCCCCGCAGCTGTGGTATCAGCAGCTCACATCCAGACAAGTCCTCAGGCTAAGGTCTTGTTGCAC
ATGACGGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACA
CCCATCCAGGTACAGAATGCCGCCGGCCTCAGCCCTGCATCTGTGGGCCTGTCCCATCACTCGCTGGCCTCCCCACAACCTGCGCCTCTG
ATGCCAGGCTCAGCCACGCACACTGCTGCCATCAGTATCAGTCGAGCCAGTGCCCCTCTGGCCTGTGCAGCAGCTGCTCCACTGACTTCC
CCAAGCATCACCAGTGCTTCTCTGGAGGCTGAGCCCAGTGGCCGGATAGTGACCGTTCTCCCTGGACTCCCCACATCTCCTGACAGTGCT
TCATCAGCTTGTGGGAACAGTTCAGCAACCAAACCAGACAAGGATAGCAAAATGTTAAGGACATGTTCACTTCCAGATCTCTCAAAGCTG
TTCAGAACCCTTATGGATGTTCCCACCGTAGGAGATGTTCGTCAAGACAATCTTGAAATAGATGAAATTGAAGATGAAAACATTAAAGAA
GGACCTTCTGATTCTGAAGACATTGTGTTTGAAGAAACTGACACAGATTTACAAGAGCTGCAGGCCTCGATGGAACAGTTACTTAGGGAA
CAACCTGGTGAAGAATACAGTGAAGAAGAAGAGTCAGTCTTGAAGAACAGTGATGTGGAGCCAACTGCAAATGGGACAGATGTGGCAGAT
GAAGATGACAATCCCAGCAGTGAAAGTGCCCTGAACGAAGAATGGCACTCAGATAACAGTGATGGTGAAATTGCTAGTGAATGTGAATGC
GATAGTGTCTTTAACCATTTAGAGGAACTGAGACTTCATCTGGAGCAGGAAATGGGCTTTGAAAAATTCTTTGAGGTTTATGAGAAAATA
AAGGCTATTCATGAAGATGAAGATGAAAATATTGAAATTTGTTCAAAAATAGTTCAAAATATTTTGGGAAATGAACATCAGCATCTTTAT
GCCAAGATTCTTCATTTAGTCATGGCAGATGGAGCCTACCAAGAAGATAATGATGAATAATCCTCAAAATGTTTTTTAATCCTCAACTAT
ATGAAAGCATTTGAATTTGGCTTATCAGAATAACAAGCTTCAGTGGGAAATACAGCAATTATTTATTTAAAAAATCAGATTTAAGATGGA
CTTTCTTATTGCATGAAAAAGATGGAGAAACATGCCATTTTTCAGTGAAGATTCTAATATTTTATCTATTTTGTTCATTGAATTCCATGG
TTAAATCTCATAAAATATATACTTTATTAAATCATCCAACCAAAGCATAGGAAACATTGACCCAGAACCTGACTTAATGGTTTTGAAGAT
TTACTATGCAATAGGGTAACTTTGAGTTTCAGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTGGTTTTT
CAATGGAGTCTTTAAGCATGATCTTTTTTCTGTCTAGTACTTGTTTTCATTCTGGCCAGCAGTTCTACATTAAATCACCTTGTCAAGGGC
TCTGTTTACATCTATACATTTTGAAGATGAAATTTTTAGCCTTAAAGTTTATATTCTCAAGTCCTTTTACAATCAGTGTGTCTCCTGAAC
TAGCACACAGGCTGTAGAAACAGTCTTAGAAATCATTGAAAGATTTGATTATGAAAGAATAGCAAAATTATATTTCTTGACATATAAAAA
GTTGGTTTAATGCCTTTATTTCTCTTTAAGGACCAGAACCAGGAATACTATATCGAAAAATTAGTCTGTGGATTTAACACTGACTTAGCA
TATAGCTTAAAGTTGCTCTTTTGGTTTTTAACTTCCTCCATACATAAGCTTCAAGGACAATAAGATGTTAAAAAGGAGGAAATAATTATT
TTTATTTTGACACTGTGACAGTTTTGGTAACTAGGATCCTAGGGAGGGAAATGTTTGCCTGTTGAACTTCTTTCTGTTATGAGAGGATTT
AGTTAGGTCATTAAGATGTTGATCACACAGCTTCAATCACAATATGCCAAGTATAACCTGGTTTCGTTAGAGGTGTCTACAGTCCAGATG
TTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAATAAAATCTTATCT

>81525_81525_2_SH3RF1-NEK1_SH3RF1_chr4_170037420_ENST00000284637_NEK1_chr4_170327898_ENST00000507142_length(amino acids)=925AA_BP=713
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGVEELPSNILLVRLLDGIKQRPWKPGPGGGSG
TNCTNALRSQSSTVANCSSKDLQSSQGGQQPRVQSWSPPVRGIPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGIH
GFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEFNSAAKQLIEWDKPP
VPGVDAGECSSAAAQSSTAPKHSDTKKNTKKRHSFTSLTMANKSSQASQNRHSMEISPPVLISSSNPTAAARISELSGLSCSAPSQVHIS
TTGLIVTPPPSSPVTTGPSFTFPSDVPYQAALGTLNPPLPPPPLLAATVLASTPPGATAAAAAAGMGPRPMAGSTDQIAHLRPQTRPSVY
VAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFPGNYVAPVTRAVTNASQAKVPMSTAGQTSRGVTMVSPSTAGGPA
QKLQGNGVAGSPSVVPAAVVSAAHIQTSPQAKVLLHMTGQMTVNQARNAVRTVAAHNQERPTAAVTPIQVQNAAGLSPASVGLSHHSLAS
PQPAPLMPGSATHTAAISISRASAPLACAAAAPLTSPSITSASLEAEPSGRIVTVLPGLPTSPDSASSACGNSSATKPDKDSKMLRTCSL
PDLSKLFRTLMDVPTVGDVRQDNLEIDEIEDENIKEGPSDSEDIVFEETDTDLQELQASMEQLLREQPGEEYSEEEESVLKNSDVEPTAN
GTDVADEDDNPSSESALNEEWHSDNSDGEIASECECDSVFNHLEELRLHLEQEMGFEKFFEVYEKIKAIHEDEDENIEICSKIVQNILGN

--------------------------------------------------------------
>81525_81525_3_SH3RF1-NEK1_SH3RF1_chr4_170037420_ENST00000284637_NEK1_chr4_170327898_ENST00000510533_length(transcript)=4240nt_BP=2481nt
CGCCCCGGGCGCCGGCTGCGTCCCGGCCTCCTCCTCCTCTTCCTCCGCCCTCCTTGGCTGGGAAAGTGGGAGGCGGCGGCGGCGGCGTGG
TGTGTGTGCGCGCGTGAGGGGGGCAGCAGAGAGGAGTCTCCCGGTGCCGCCGCGGCGTCAGAGACACTGCGAGCGGCGAGCGCGGTGGGG
CCGCATCTGCATCAGCCGCCGCAGCCGCTGCGGGGCCGCGAACAAAGAGGAGGAGCCGAGGCGCGAGAGCAAAGTCTGAAATGGATGTTA
CATGAGTCATTTTAAGGGATGCACACAACTATGAACATTTCTGAAGATTTTTTCTCAGTAAAGTAGATAAAGATGGATGAATCAGCCTTG
TTGGATCTTTTGGAGTGTCCGGTGTGTCTAGAGCGCCTTGATGCTTCTGCGAAGGTCTTGCCTTGCCAGCATACGTTTTGCAAGCGATGT
TTGCTGGGGATCGTAGGTTCTCGAAATGAACTCAGATGTCCCGAGTGCAGGACTCTTGTTGGCTCGGGTGTCGAGGAGCTTCCCAGTAAC
ATCTTGCTGGTCAGACTTCTGGATGGCATCAAACAGAGGCCTTGGAAACCTGGTCCTGGTGGGGGAAGTGGGACCAACTGCACAAATGCA
TTAAGGTCTCAGAGCAGCACTGTGGCTAATTGTAGCTCAAAAGATCTGCAGAGCTCCCAGGGCGGACAGCAGCCTCGGGTGCAATCCTGG
AGCCCCCCAGTGAGGGGTATACCTCAGTTACCATGTGCCAAAGCATTATACAACTATGAAGGAAAAGAGCCTGGAGACCTTAAATTCAGC
AAAGGTGACATCATCATTTTGCGAAGACAAGTGGATGAAAATTGGTACCATGGGGAAGTCAATGGAATCCATGGCTTTTTCCCCACCAAC
TTTGTGCAGATTATTAAACCGTTACCTCAGCCCCCACCTCAGTGCAAAGCACTTTATGACTTTGAAGTGAAAGACAAGGAAGCAGACAAA
GATTGCCTTCCATTTGCAAAGGATGATGTTCTGACTGTGATCCGAAGAGTGGATGAAAACTGGGCTGAAGGAATGCTGGCAGACAAAATA
GGAATATTTCCAATTTCATATGTTGAGTTTAACTCGGCTGCTAAGCAGCTGATAGAATGGGATAAGCCTCCTGTGCCAGGAGTTGATGCT
GGAGAATGTTCCTCGGCAGCAGCCCAGAGCAGCACTGCCCCAAAGCACTCCGACACCAAGAAGAACACCAAAAAGCGGCACTCCTTCACT
TCCCTCACTATGGCCAACAAGTCCTCCCAGGCATCCCAGAACCGCCACTCCATGGAGATCAGCCCCCCTGTCCTCATCAGCTCCAGCAAC
CCCACTGCTGCTGCACGGATCAGCGAGCTGTCTGGGCTCTCCTGCAGTGCCCCTTCTCAGGTTCATATAAGTACCACCGGGTTAATTGTG
ACCCCGCCCCCAAGCAGCCCAGTGACAACTGGCCCCTCGTTTACTTTCCCATCAGATGTTCCCTACCAAGCTGCCCTTGGAACTTTGAAT
CCTCCTCTTCCACCACCCCCTCTCCTGGCTGCCACTGTCCTTGCCTCCACACCACCAGGCGCCACCGCCGCTGCTGCTGCTGCTGGAATG
GGACCGAGGCCCATGGCAGGATCCACTGACCAGATTGCACATTTACGGCCGCAGACTCGCCCCAGTGTGTATGTTGCTATATATCCATAC
ACTCCTCGGAAAGAGGATGAACTAGAGCTGAGAAAAGGGGAGATGTTTTTAGTGTTTGAGCGCTGCCAGGATGGCTGGTTCAAAGGGACA
TCCATGCATACCAGCAAGATAGGGGTTTTCCCTGGCAATTATGTGGCACCAGTCACAAGGGCGGTGACAAATGCTTCCCAAGCTAAAGTC
CCTATGTCTACAGCTGGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAAT
GGCGTGGCTGGGAGTCCCAGTGTTGTCCCCGCAGCTGTGGTATCAGCAGCTCACATCCAGACAAGTCCTCAGGCTAAGGTCTTGTTGCAC
ATGACGGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACA
CCCATCCAGGTACAGAATGCCGCCGGCCTCAGCCCTGCATCTGTGGGCCTGTCCCATCACTCGCTGGCCTCCCCACAACCTGCGCCTCTG
ATGCCAGGCTCAGCCACGCACACTGCTGCCATCAGTATCAGTCGAGCCAGTGCCCCTCTGGCCTGTGCAGCAGCTGCTCCACTGACTTCC
CCAAGCATCACCAGTGCTTCTCTGGAGGCTGAGCCCAGTGGCCGGATAGTGACCGTTCTCCCTGGACTCCCCACATCTCCTGACAGTGCT
TCATCAGCTTGTGGGAACAGTTCAGCAACCAAACCAGACAAGGATAGCAAAATGTTAAGGACATGTTCACTTCCAGATCTCTCAAAGCTG
TTCAGAACCCTTATGGATGTTCCCACCGTAGGAGATGTTCGTCAAGACAATCTTGAAATAGATGAAATTGAAGATGAAAACATTAAAGAA
GGACCTTCTGATTCTGAAGACATTGTGTTTGAAGAAACTGACACAGATTTACAAGAGCTGCAGGCCTCGATGGAACAGTTACTTAGGGAA
CAACCTGGTGAAGAATACAGTGAAGAAGAAGAGTCAGTCTTGAAGAACAGTGATGTGGAGCCAACTGCAAATGGGACAGATGTGGCAGAT
GAAGATGACAATCCCAGCAGTGAAAGTGCCCTGAACGAAGAATGGCACTCAGATAACAGTGATGGTGAAATTGCTAGTGAATGTGAATGC
GATAGTGTCTTTAACCATTTAGAGGAACTGAGACTTCATCTGGAGCAGGAAATGGGCTTTGAAAAATTCTTTGAGGTTTATGAGAAAATA
AAGGCTATTCATGAAGATGAAGATGAAAATATTGAAATTTGTTCAAAAATAGTTCAAAATATTTTGGGAAATGAACATCAGCATCTTTAT
GCCAAGATTCTTCATTTAGTCATGGCAGATGGAGCCTACCAAGAAGATAATGATGAATAATCCTCAAAATGTTTTTTAATCCTCAACTAT
ATGAAAGCATTTGAATTTGGCTTATCAGAATAACAAGCTTCAGTGGGAAATACAGCAATTATTTATTTAAAAAATCAGATTTAAGATGGA
CTTTCTTATTGCATGAAAAAGATGGAGAAACATGCCATTTTTCAGTGAAGATTCTAATATTTTATCTATTTTGTTCATTGAATTCCATGG
TTAAATCTCATAAAATATATACTTTATTAAATCATCCAACCAAAGCATAGGAAACATTGACCCAGAACCTGACTTAATGGTTTTGAAGAT
TTACTATGCAATAGGGTAACTTTGAGTTTCAGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTGGTTTTT
CAATGGAGTCTTTAAGCATGATCTTTTTTCTGTCTAGTACTTGTTTTCATTCTGGCCAGCAGTTCTACATTAAATCACCTTGTCAAGGGC
TCTGTTTACATCTATACATTTTGAAGATGAAATTTTTAGCCTTAAAGTTTATATTCTCAAGTCCTTTTACAATCAGTGTGTCTCCTGAAC
TAGCACACAGGCTGTAGAAACAGTCTTAGAAATCATTGAAAGATTTGATTATGAAAGAATAGCAAAATTATATTTCTTGACATATAAAAA
GTTGGTTTAATGCCTTTATTTCTCTTTAAGGACCAGAACCAGGAATACTATATCGAAAAATTAGTCTGTGGATTTAACACTGACTTAGCA
TATAGCTTAAAGTTGCTCTTTTGGTTTTTAACTTCCTCCATACATAAGCTTCAAGGACAATAAGATGTTAAAAAGGAGGAAATAATTATT
TTTATTTTGACACTGTGACAGTTTTGGTAACTAGGATCCTAGGGAGGGAAATGTTTGCCTGTTGAACTTCTTTCTGTTATGAGAGGATTT
AGTTAGGTCATTAAGATGTTGATCACACAGCTTCAATCACAATATGCCAAGTATAACCTGGTTTCGTTAGAGGTGTCTACAGTCCAGATG
TTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAATAAAATCTTATCT

>81525_81525_3_SH3RF1-NEK1_SH3RF1_chr4_170037420_ENST00000284637_NEK1_chr4_170327898_ENST00000510533_length(amino acids)=925AA_BP=713
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGVEELPSNILLVRLLDGIKQRPWKPGPGGGSG
TNCTNALRSQSSTVANCSSKDLQSSQGGQQPRVQSWSPPVRGIPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGIH
GFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEFNSAAKQLIEWDKPP
VPGVDAGECSSAAAQSSTAPKHSDTKKNTKKRHSFTSLTMANKSSQASQNRHSMEISPPVLISSSNPTAAARISELSGLSCSAPSQVHIS
TTGLIVTPPPSSPVTTGPSFTFPSDVPYQAALGTLNPPLPPPPLLAATVLASTPPGATAAAAAAGMGPRPMAGSTDQIAHLRPQTRPSVY
VAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFPGNYVAPVTRAVTNASQAKVPMSTAGQTSRGVTMVSPSTAGGPA
QKLQGNGVAGSPSVVPAAVVSAAHIQTSPQAKVLLHMTGQMTVNQARNAVRTVAAHNQERPTAAVTPIQVQNAAGLSPASVGLSHHSLAS
PQPAPLMPGSATHTAAISISRASAPLACAAAAPLTSPSITSASLEAEPSGRIVTVLPGLPTSPDSASSACGNSSATKPDKDSKMLRTCSL
PDLSKLFRTLMDVPTVGDVRQDNLEIDEIEDENIKEGPSDSEDIVFEETDTDLQELQASMEQLLREQPGEEYSEEEESVLKNSDVEPTAN
GTDVADEDDNPSSESALNEEWHSDNSDGEIASECECDSVFNHLEELRLHLEQEMGFEKFFEVYEKIKAIHEDEDENIEICSKIVQNILGN

--------------------------------------------------------------
>81525_81525_4_SH3RF1-NEK1_SH3RF1_chr4_170037420_ENST00000284637_NEK1_chr4_170327898_ENST00000511633_length(transcript)=4349nt_BP=2481nt
CGCCCCGGGCGCCGGCTGCGTCCCGGCCTCCTCCTCCTCTTCCTCCGCCCTCCTTGGCTGGGAAAGTGGGAGGCGGCGGCGGCGGCGTGG
TGTGTGTGCGCGCGTGAGGGGGGCAGCAGAGAGGAGTCTCCCGGTGCCGCCGCGGCGTCAGAGACACTGCGAGCGGCGAGCGCGGTGGGG
CCGCATCTGCATCAGCCGCCGCAGCCGCTGCGGGGCCGCGAACAAAGAGGAGGAGCCGAGGCGCGAGAGCAAAGTCTGAAATGGATGTTA
CATGAGTCATTTTAAGGGATGCACACAACTATGAACATTTCTGAAGATTTTTTCTCAGTAAAGTAGATAAAGATGGATGAATCAGCCTTG
TTGGATCTTTTGGAGTGTCCGGTGTGTCTAGAGCGCCTTGATGCTTCTGCGAAGGTCTTGCCTTGCCAGCATACGTTTTGCAAGCGATGT
TTGCTGGGGATCGTAGGTTCTCGAAATGAACTCAGATGTCCCGAGTGCAGGACTCTTGTTGGCTCGGGTGTCGAGGAGCTTCCCAGTAAC
ATCTTGCTGGTCAGACTTCTGGATGGCATCAAACAGAGGCCTTGGAAACCTGGTCCTGGTGGGGGAAGTGGGACCAACTGCACAAATGCA
TTAAGGTCTCAGAGCAGCACTGTGGCTAATTGTAGCTCAAAAGATCTGCAGAGCTCCCAGGGCGGACAGCAGCCTCGGGTGCAATCCTGG
AGCCCCCCAGTGAGGGGTATACCTCAGTTACCATGTGCCAAAGCATTATACAACTATGAAGGAAAAGAGCCTGGAGACCTTAAATTCAGC
AAAGGTGACATCATCATTTTGCGAAGACAAGTGGATGAAAATTGGTACCATGGGGAAGTCAATGGAATCCATGGCTTTTTCCCCACCAAC
TTTGTGCAGATTATTAAACCGTTACCTCAGCCCCCACCTCAGTGCAAAGCACTTTATGACTTTGAAGTGAAAGACAAGGAAGCAGACAAA
GATTGCCTTCCATTTGCAAAGGATGATGTTCTGACTGTGATCCGAAGAGTGGATGAAAACTGGGCTGAAGGAATGCTGGCAGACAAAATA
GGAATATTTCCAATTTCATATGTTGAGTTTAACTCGGCTGCTAAGCAGCTGATAGAATGGGATAAGCCTCCTGTGCCAGGAGTTGATGCT
GGAGAATGTTCCTCGGCAGCAGCCCAGAGCAGCACTGCCCCAAAGCACTCCGACACCAAGAAGAACACCAAAAAGCGGCACTCCTTCACT
TCCCTCACTATGGCCAACAAGTCCTCCCAGGCATCCCAGAACCGCCACTCCATGGAGATCAGCCCCCCTGTCCTCATCAGCTCCAGCAAC
CCCACTGCTGCTGCACGGATCAGCGAGCTGTCTGGGCTCTCCTGCAGTGCCCCTTCTCAGGTTCATATAAGTACCACCGGGTTAATTGTG
ACCCCGCCCCCAAGCAGCCCAGTGACAACTGGCCCCTCGTTTACTTTCCCATCAGATGTTCCCTACCAAGCTGCCCTTGGAACTTTGAAT
CCTCCTCTTCCACCACCCCCTCTCCTGGCTGCCACTGTCCTTGCCTCCACACCACCAGGCGCCACCGCCGCTGCTGCTGCTGCTGGAATG
GGACCGAGGCCCATGGCAGGATCCACTGACCAGATTGCACATTTACGGCCGCAGACTCGCCCCAGTGTGTATGTTGCTATATATCCATAC
ACTCCTCGGAAAGAGGATGAACTAGAGCTGAGAAAAGGGGAGATGTTTTTAGTGTTTGAGCGCTGCCAGGATGGCTGGTTCAAAGGGACA
TCCATGCATACCAGCAAGATAGGGGTTTTCCCTGGCAATTATGTGGCACCAGTCACAAGGGCGGTGACAAATGCTTCCCAAGCTAAAGTC
CCTATGTCTACAGCTGGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAAT
GGCGTGGCTGGGAGTCCCAGTGTTGTCCCCGCAGCTGTGGTATCAGCAGCTCACATCCAGACAAGTCCTCAGGCTAAGGTCTTGTTGCAC
ATGACGGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACA
CCCATCCAGGTACAGAATGCCGCCGGCCTCAGCCCTGCATCTGTGGGCCTGTCCCATCACTCGCTGGCCTCCCCACAACCTGCGCCTCTG
ATGCCAGGCTCAGCCACGCACACTGCTGCCATCAGTATCAGTCGAGCCAGTGCCCCTCTGGCCTGTGCAGCAGCTGCTCCACTGACTTCC
CCAAGCATCACCAGTGCTTCTCTGGAGGCTGAGCCCAGTGGCCGGATAGTGACCGTTCTCCCTGGACTCCCCACATCTCCTGACAGTGCT
TCATCAGCTTGTGGGAACAGTTCAGCAACCAAACCAGACAAGGATAGCAAAATGTTAAGGACATGTTCACTTCCAGATCTCTCAAAGCTG
TTCAGAACCCTTATGGATGTTCCCACCGTAGGAGATGTTCGTCAAGACAATCTTGAAATAGATGAAATTGAAGATGAAAACATTAAAGAA
GGACCTTCTGATTCTGAAGACATTGTGTTTGAAGAAACTGACACAGATTTACAAGAGCTGCAGGCCTCGATGGAACAGTTACTTAGGGAA
CAACCTGGTGAAGAATACAGTGAAGAAGAAGAGTCAGTCTTGAAGAACAGTGATGTGGAGCCAACTGCAAATGGGACAGATGTGGCAGAT
GAAGATGACAATCCCAGCAGTGAAAGTGCCCTGAACGAAGAATGGCACTCAGATAACAGTGATGGTGAAATTGCTAGTGAATGTGAATGC
GATAGTGTCTTTAACCATTTAGAGGAACTGAGACTTCATCTGGAGCAGGAAATGGGCTTTGAAAAATTCTTTGAGGTTTATGAGAAAATA
AAGGCTATTCATGAAGATGAAGATGAAAATATTGAAATTTGTTCAAAAATAGTTCAAAATATTTTGGGAAATGAACATCAGCATCTTTAT
GCCAAGATTCTTCATTTAGTCATGGCAGATGGAGCCTACCAAGAAGATAATGATGAATAATCCTCAAAATGTTTTTTAATCCTCAACTAT
ATGAAAGCATTTGAATTTGGCTTATCAGAATAACAAGCTTCAGTGGGAAATACAGCAATTATTTATTTAAAAAATCAGATTTAAGATGGA
CTTTCTTATTGCATGAAAAAGATGGAGAAACATGCCATTTTTCAGTGAAGATTCTAATATTTTATCTATTTTGTTCATTGAATTCCATGG
TTAAATCTCATAAAATATATACTTTATTAAATCATCCAACCAAAGCATAGGAAACATTGACCCAGAACCTGACTTAATGGTTTTGAAGAT
TTACTATGCAATAGGGTAACTTTGAGTTTCAGCAAATGTCTTTAGGTTGAAGGAATTACCTATGTCATGAAGGACCTGTCTGTGGTTTTT
CAATGGAGTCTTTAAGCATGATCTTTTTTCTGTCTAGTACTTGTTTTCATTCTGGCCAGCAGTTCTACATTAAATCACCTTGTCAAGGGC
TCTGTTTACATCTATACATTTTGAAGATGAAATTTTTAGCCTTAAAGTTTATATTCTCAAGTCCTTTTACAATCAGTGTGTCTCCTGAAC
TAGCACACAGGCTGTAGAAACAGTCTTAGAAATCATTGAAAGATTTGATTATGAAAGAATAGCAAAATTATATTTCTTGACATATAAAAA
GTTGGTTTAATGCCTTTATTTCTCTTTAAGGACCAGAACCAGGAATACTATATCGAAAAATTAGTCTGTGGATTTAACACTGACTTAGCA
TATAGCTTAAAGTTGCTCTTTTGGTTTTTAACTTCCTCCATACATAAGCTTCAAGGACAATAAGATGTTAAAAAGGAGGAAATAATTATT
TTTATTTTGACACTGTGACAGTTTTGGTAACTAGGATCCTAGGGAGGGAAATGTTTGCCTGTTGAACTTCTTTCTGTTATGAGAGGATTT
AGTTAGGTCATTAAGATGTTGATCACACAGCTTCAATCACAATATGCCAAGTATAACCTGGTTTCGTTAGAGGTGTCTACAGTCCAGATG
TTCTTCGTAATAAAAGCAAAGTTTTTGAACCTCTGAGTCCAAAGCAGGCTGGTTGGCATAATATGTAATTTGAAAAATAAAATCTTATCT
TGCAGCACTATCAGTATGTTGAATTTATTATGTATATTATTTCTAATATCCGAAACTAAATACTTGATTTTTTAATATGTGTGTTTATTT

>81525_81525_4_SH3RF1-NEK1_SH3RF1_chr4_170037420_ENST00000284637_NEK1_chr4_170327898_ENST00000511633_length(amino acids)=925AA_BP=713
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGVEELPSNILLVRLLDGIKQRPWKPGPGGGSG
TNCTNALRSQSSTVANCSSKDLQSSQGGQQPRVQSWSPPVRGIPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGIH
GFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEFNSAAKQLIEWDKPP
VPGVDAGECSSAAAQSSTAPKHSDTKKNTKKRHSFTSLTMANKSSQASQNRHSMEISPPVLISSSNPTAAARISELSGLSCSAPSQVHIS
TTGLIVTPPPSSPVTTGPSFTFPSDVPYQAALGTLNPPLPPPPLLAATVLASTPPGATAAAAAAGMGPRPMAGSTDQIAHLRPQTRPSVY
VAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFPGNYVAPVTRAVTNASQAKVPMSTAGQTSRGVTMVSPSTAGGPA
QKLQGNGVAGSPSVVPAAVVSAAHIQTSPQAKVLLHMTGQMTVNQARNAVRTVAAHNQERPTAAVTPIQVQNAAGLSPASVGLSHHSLAS
PQPAPLMPGSATHTAAISISRASAPLACAAAAPLTSPSITSASLEAEPSGRIVTVLPGLPTSPDSASSACGNSSATKPDKDSKMLRTCSL
PDLSKLFRTLMDVPTVGDVRQDNLEIDEIEDENIKEGPSDSEDIVFEETDTDLQELQASMEQLLREQPGEEYSEEEESVLKNSDVEPTAN
GTDVADEDDNPSSESALNEEWHSDNSDGEIASECECDSVFNHLEELRLHLEQEMGFEKFFEVYEKIKAIHEDEDENIEICSKIVQNILGN

--------------------------------------------------------------
>81525_81525_5_SH3RF1-NEK1_SH3RF1_chr4_170037420_ENST00000284637_NEK1_chr4_170327898_ENST00000512193_length(transcript)=3402nt_BP=2481nt
CGCCCCGGGCGCCGGCTGCGTCCCGGCCTCCTCCTCCTCTTCCTCCGCCCTCCTTGGCTGGGAAAGTGGGAGGCGGCGGCGGCGGCGTGG
TGTGTGTGCGCGCGTGAGGGGGGCAGCAGAGAGGAGTCTCCCGGTGCCGCCGCGGCGTCAGAGACACTGCGAGCGGCGAGCGCGGTGGGG
CCGCATCTGCATCAGCCGCCGCAGCCGCTGCGGGGCCGCGAACAAAGAGGAGGAGCCGAGGCGCGAGAGCAAAGTCTGAAATGGATGTTA
CATGAGTCATTTTAAGGGATGCACACAACTATGAACATTTCTGAAGATTTTTTCTCAGTAAAGTAGATAAAGATGGATGAATCAGCCTTG
TTGGATCTTTTGGAGTGTCCGGTGTGTCTAGAGCGCCTTGATGCTTCTGCGAAGGTCTTGCCTTGCCAGCATACGTTTTGCAAGCGATGT
TTGCTGGGGATCGTAGGTTCTCGAAATGAACTCAGATGTCCCGAGTGCAGGACTCTTGTTGGCTCGGGTGTCGAGGAGCTTCCCAGTAAC
ATCTTGCTGGTCAGACTTCTGGATGGCATCAAACAGAGGCCTTGGAAACCTGGTCCTGGTGGGGGAAGTGGGACCAACTGCACAAATGCA
TTAAGGTCTCAGAGCAGCACTGTGGCTAATTGTAGCTCAAAAGATCTGCAGAGCTCCCAGGGCGGACAGCAGCCTCGGGTGCAATCCTGG
AGCCCCCCAGTGAGGGGTATACCTCAGTTACCATGTGCCAAAGCATTATACAACTATGAAGGAAAAGAGCCTGGAGACCTTAAATTCAGC
AAAGGTGACATCATCATTTTGCGAAGACAAGTGGATGAAAATTGGTACCATGGGGAAGTCAATGGAATCCATGGCTTTTTCCCCACCAAC
TTTGTGCAGATTATTAAACCGTTACCTCAGCCCCCACCTCAGTGCAAAGCACTTTATGACTTTGAAGTGAAAGACAAGGAAGCAGACAAA
GATTGCCTTCCATTTGCAAAGGATGATGTTCTGACTGTGATCCGAAGAGTGGATGAAAACTGGGCTGAAGGAATGCTGGCAGACAAAATA
GGAATATTTCCAATTTCATATGTTGAGTTTAACTCGGCTGCTAAGCAGCTGATAGAATGGGATAAGCCTCCTGTGCCAGGAGTTGATGCT
GGAGAATGTTCCTCGGCAGCAGCCCAGAGCAGCACTGCCCCAAAGCACTCCGACACCAAGAAGAACACCAAAAAGCGGCACTCCTTCACT
TCCCTCACTATGGCCAACAAGTCCTCCCAGGCATCCCAGAACCGCCACTCCATGGAGATCAGCCCCCCTGTCCTCATCAGCTCCAGCAAC
CCCACTGCTGCTGCACGGATCAGCGAGCTGTCTGGGCTCTCCTGCAGTGCCCCTTCTCAGGTTCATATAAGTACCACCGGGTTAATTGTG
ACCCCGCCCCCAAGCAGCCCAGTGACAACTGGCCCCTCGTTTACTTTCCCATCAGATGTTCCCTACCAAGCTGCCCTTGGAACTTTGAAT
CCTCCTCTTCCACCACCCCCTCTCCTGGCTGCCACTGTCCTTGCCTCCACACCACCAGGCGCCACCGCCGCTGCTGCTGCTGCTGGAATG
GGACCGAGGCCCATGGCAGGATCCACTGACCAGATTGCACATTTACGGCCGCAGACTCGCCCCAGTGTGTATGTTGCTATATATCCATAC
ACTCCTCGGAAAGAGGATGAACTAGAGCTGAGAAAAGGGGAGATGTTTTTAGTGTTTGAGCGCTGCCAGGATGGCTGGTTCAAAGGGACA
TCCATGCATACCAGCAAGATAGGGGTTTTCCCTGGCAATTATGTGGCACCAGTCACAAGGGCGGTGACAAATGCTTCCCAAGCTAAAGTC
CCTATGTCTACAGCTGGCCAGACAAGTCGGGGAGTGACCATGGTCAGTCCTTCCACGGCAGGAGGGCCTGCCCAGAAGCTCCAGGGAAAT
GGCGTGGCTGGGAGTCCCAGTGTTGTCCCCGCAGCTGTGGTATCAGCAGCTCACATCCAGACAAGTCCTCAGGCTAAGGTCTTGTTGCAC
ATGACGGGGCAAATGACAGTCAACCAGGCCCGCAATGCTGTGAGGACAGTTGCAGCGCACAACCAGGAACGCCCCACGGCAGCAGTGACA
CCCATCCAGGTACAGAATGCCGCCGGCCTCAGCCCTGCATCTGTGGGCCTGTCCCATCACTCGCTGGCCTCCCCACAACCTGCGCCTCTG
ATGCCAGGCTCAGCCACGCACACTGCTGCCATCAGTATCAGTCGAGCCAGTGCCCCTCTGGCCTGTGCAGCAGCTGCTCCACTGACTTCC
CCAAGCATCACCAGTGCTTCTCTGGAGGCTGAGCCCAGTGGCCGGATAGTGACCGTTCTCCCTGGACTCCCCACATCTCCTGACAGTGCT
TCATCAGCTTGTGGGAACAGTTCAGCAACCAAACCAGACAAGGATAGCAAAATGTTAAGGACATGTTCACTTCCAGATCTCTCAAAGCTG
TTCAGAACCCTTATGGATGTTCCCACCGTAGGAGATGTTCGTCAAGACAATCTTGAAATAGATGAAATTGAAGATGAAAACATTAAAGAA
GGACCTTCTGATTCTGAAGACATTGTGTTTGAAGAAACTGACACAGATTTACAAGAGCTGCAGGCCTCGATGGAACAGTTACTTAGGGAA
CAACCTGGTGAAGAATACAGTGAAGAAGAAGAGTCAGTCTTGAAGAACAGTGATGTGGAGCCAACTGCAAATGGGACAGATGTGGCAGAT
GAAGATGACAATCCCAGCAGTGAAAGTGCCCTGAACGAAGAATGGCACTCAGATAACAGTGATGGTGAAATTGCTAGTGAATGTGAATGC
GATAGTGTCTTTAACCATTTAGAGGAACTGAGACTTCATCTGGAGCAGGAAATGGGCTTTGAAAAATTCTTTGAGGTTTATGAGAAAATA
AAGGCTATTCATGAAGATGAAGATGAAAATATTGAAATTTGTTCAAAAATAGTTCAAAATATTTTGGGAAATGAACATCAGCATCTTTAT
GCCAAGATTCTTCATTTAGTCATGGCAGATGGAGCCTACCAAGAAGATAATGATGAATAATCCTCAAAATGTTTTTTAATCCTCAACTAT
ATGAAAGCATTTGAATTTGGCTTATCAGAATAACAAGCTTCAGTGGGAAATACAGCAATTATTTATTTAAAAAATCAGATTTAAGATGGA
CTTTCTTATTGCATGAAAAAGATGGAGAAACATGCCATTTTTCAGTGAAGATTCTAATATTTTATCTATTTTGTTCATTGAATTCCATGG

>81525_81525_5_SH3RF1-NEK1_SH3RF1_chr4_170037420_ENST00000284637_NEK1_chr4_170327898_ENST00000512193_length(amino acids)=925AA_BP=713
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGVEELPSNILLVRLLDGIKQRPWKPGPGGGSG
TNCTNALRSQSSTVANCSSKDLQSSQGGQQPRVQSWSPPVRGIPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGIH
GFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEFNSAAKQLIEWDKPP
VPGVDAGECSSAAAQSSTAPKHSDTKKNTKKRHSFTSLTMANKSSQASQNRHSMEISPPVLISSSNPTAAARISELSGLSCSAPSQVHIS
TTGLIVTPPPSSPVTTGPSFTFPSDVPYQAALGTLNPPLPPPPLLAATVLASTPPGATAAAAAAGMGPRPMAGSTDQIAHLRPQTRPSVY
VAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFPGNYVAPVTRAVTNASQAKVPMSTAGQTSRGVTMVSPSTAGGPA
QKLQGNGVAGSPSVVPAAVVSAAHIQTSPQAKVLLHMTGQMTVNQARNAVRTVAAHNQERPTAAVTPIQVQNAAGLSPASVGLSHHSLAS
PQPAPLMPGSATHTAAISISRASAPLACAAAAPLTSPSITSASLEAEPSGRIVTVLPGLPTSPDSASSACGNSSATKPDKDSKMLRTCSL
PDLSKLFRTLMDVPTVGDVRQDNLEIDEIEDENIKEGPSDSEDIVFEETDTDLQELQASMEQLLREQPGEEYSEEEESVLKNSDVEPTAN
GTDVADEDDNPSSESALNEEWHSDNSDGEIASECECDSVFNHLEELRLHLEQEMGFEKFFEVYEKIKAIHEDEDENIEICSKIVQNILGN

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Fusion Gene PPI Analysis for SH3RF1-NEK1


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with
HgeneSH3RF1chr4:170037420chr4:170327898ENST00000284637-1012440_543713.0889.0AKT2
HgeneSH3RF1chr4:170037420chr4:170327898ENST00000284637-1012292_362713.0889.0RAC1


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for SH3RF1-NEK1


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for SH3RF1-NEK1


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource