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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:SKIL-LEPREL1 (FusionGDB2 ID:82095) |
Fusion Gene Summary for SKIL-LEPREL1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: SKIL-LEPREL1 | Fusion gene ID: 82095 | Hgene | Tgene | Gene symbol | SKIL | LEPREL1 | Gene ID | 6498 | 55214 |
Gene name | SKI like proto-oncogene | prolyl 3-hydroxylase 2 | |
Synonyms | SNO|SnoA|SnoI|SnoN | LEPREL1|MCVD|MLAT4 | |
Cytomap | 3q26.2 | 3q28 | |
Type of gene | protein-coding | protein-coding | |
Description | ski-like proteinSKI-like oncogeneski-related oncogene snoN | prolyl 3-hydroxylase 2leprecan-like 1myxoid liposarcoma-associated protein 4procollagen-proline 3-dioxygenase 2prolyl 3-hydroxylase 3 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000259119, ENST00000413427, ENST00000426052, ENST00000458537, ENST00000490989, | ENST00000427335, ENST00000319332, | |
Fusion gene scores | * DoF score | 7 X 5 X 6=210 | 5 X 3 X 5=75 |
# samples | 8 | 6 | |
** MAII score | log2(8/210*10)=-1.39231742277876 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(6/75*10)=-0.321928094887362 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: SKIL [Title/Abstract] AND LEPREL1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | SKIL(170079217)-LEPREL1(189713231), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | LEPREL1 | GO:0008285 | negative regulation of cell proliferation | 19436308 |
Tgene | LEPREL1 | GO:0019511 | peptidyl-proline hydroxylation | 18487197 |
Tgene | LEPREL1 | GO:0032963 | collagen metabolic process | 18487197 |
Fusion gene breakpoints across SKIL (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across LEPREL1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | ESCA | TCGA-2H-A9GR | SKIL | chr3 | 170079217 | + | LEPREL1 | chr3 | 189713231 | - |
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Fusion Gene ORF analysis for SKIL-LEPREL1 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000259119 | ENST00000427335 | SKIL | chr3 | 170079217 | + | LEPREL1 | chr3 | 189713231 | - |
5CDS-5UTR | ENST00000413427 | ENST00000427335 | SKIL | chr3 | 170079217 | + | LEPREL1 | chr3 | 189713231 | - |
5CDS-5UTR | ENST00000426052 | ENST00000427335 | SKIL | chr3 | 170079217 | + | LEPREL1 | chr3 | 189713231 | - |
5CDS-5UTR | ENST00000458537 | ENST00000427335 | SKIL | chr3 | 170079217 | + | LEPREL1 | chr3 | 189713231 | - |
In-frame | ENST00000259119 | ENST00000319332 | SKIL | chr3 | 170079217 | + | LEPREL1 | chr3 | 189713231 | - |
In-frame | ENST00000413427 | ENST00000319332 | SKIL | chr3 | 170079217 | + | LEPREL1 | chr3 | 189713231 | - |
In-frame | ENST00000426052 | ENST00000319332 | SKIL | chr3 | 170079217 | + | LEPREL1 | chr3 | 189713231 | - |
In-frame | ENST00000458537 | ENST00000319332 | SKIL | chr3 | 170079217 | + | LEPREL1 | chr3 | 189713231 | - |
intron-3CDS | ENST00000490989 | ENST00000319332 | SKIL | chr3 | 170079217 | + | LEPREL1 | chr3 | 189713231 | - |
intron-5UTR | ENST00000490989 | ENST00000427335 | SKIL | chr3 | 170079217 | + | LEPREL1 | chr3 | 189713231 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000259119 | SKIL | chr3 | 170079217 | + | ENST00000319332 | LEPREL1 | chr3 | 189713231 | - | 4600 | 1769 | 557 | 3415 | 952 |
ENST00000426052 | SKIL | chr3 | 170079217 | + | ENST00000319332 | LEPREL1 | chr3 | 189713231 | - | 4101 | 1270 | 181 | 2916 | 911 |
ENST00000413427 | SKIL | chr3 | 170079217 | + | ENST00000319332 | LEPREL1 | chr3 | 189713231 | - | 4638 | 1807 | 595 | 3453 | 952 |
ENST00000458537 | SKIL | chr3 | 170079217 | + | ENST00000319332 | LEPREL1 | chr3 | 189713231 | - | 4638 | 1807 | 595 | 3453 | 952 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000259119 | ENST00000319332 | SKIL | chr3 | 170079217 | + | LEPREL1 | chr3 | 189713231 | - | 0.000504008 | 0.999496 |
ENST00000426052 | ENST00000319332 | SKIL | chr3 | 170079217 | + | LEPREL1 | chr3 | 189713231 | - | 0.000709967 | 0.99929 |
ENST00000413427 | ENST00000319332 | SKIL | chr3 | 170079217 | + | LEPREL1 | chr3 | 189713231 | - | 0.000473652 | 0.9995264 |
ENST00000458537 | ENST00000319332 | SKIL | chr3 | 170079217 | + | LEPREL1 | chr3 | 189713231 | - | 0.000473652 | 0.9995264 |
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Fusion Genomic Features for SKIL-LEPREL1 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for SKIL-LEPREL1 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr3:170079217/chr3:189713231) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | LEPREL1 | chr3:170079217 | chr3:189713231 | ENST00000319332 | 0 | 15 | 557_671 | 160 | 709.0 | Domain | Fe2OG dioxygenase | |
Tgene | LEPREL1 | chr3:170079217 | chr3:189713231 | ENST00000319332 | 0 | 15 | 705_708 | 160 | 709.0 | Motif | Prevents secretion from ER | |
Tgene | LEPREL1 | chr3:170079217 | chr3:189713231 | ENST00000319332 | 0 | 15 | 210_243 | 160 | 709.0 | Repeat | Note=TPR 3 | |
Tgene | LEPREL1 | chr3:170079217 | chr3:189713231 | ENST00000319332 | 0 | 15 | 306_339 | 160 | 709.0 | Repeat | Note=TPR 4 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | SKIL | chr3:170079217 | chr3:189713231 | ENST00000259119 | + | 2 | 7 | 536_684 | 366 | 685.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | SKIL | chr3:170079217 | chr3:189713231 | ENST00000413427 | + | 1 | 6 | 536_684 | 366 | 639.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | SKIL | chr3:170079217 | chr3:189713231 | ENST00000426052 | + | 3 | 8 | 536_684 | 346 | 665.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | SKIL | chr3:170079217 | chr3:189713231 | ENST00000458537 | + | 1 | 6 | 536_684 | 366 | 685.0 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | LEPREL1 | chr3:170079217 | chr3:189713231 | ENST00000319332 | 0 | 15 | 93_99 | 160 | 709.0 | Compositional bias | Note=Poly-Pro | |
Tgene | LEPREL1 | chr3:170079217 | chr3:189713231 | ENST00000319332 | 0 | 15 | 148_181 | 160 | 709.0 | Repeat | Note=TPR 2 | |
Tgene | LEPREL1 | chr3:170079217 | chr3:189713231 | ENST00000319332 | 0 | 15 | 44_77 | 160 | 709.0 | Repeat | Note=TPR 1 |
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Fusion Gene Sequence for SKIL-LEPREL1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>82095_82095_1_SKIL-LEPREL1_SKIL_chr3_170079217_ENST00000259119_LEPREL1_chr3_189713231_ENST00000319332_length(transcript)=4600nt_BP=1769nt GAGCGGGCGAGCGGCGACGGCGGCGGCGGCGGGCACAGATTAATTAAAAGAAGAATGAACTATAATCCTTGAAGATAACTGGGCAATTTT TTAAGTCGGAGGCTGTTCTTACTGGTGTGAGGATTTACACACGTCTTCAGTTTTTCAGCACAGACCAGCAGACCATCATTTTTAGAGGAA ATACTCCCTCTGCCCTCCTTTTTGGTTTCCTTGGTGGTAAAGATTAAATTTGGTTGCATCATTTTGACTTGTGTTTGAGTCTAGATTTTA TGGCACAAGGAATGGCATAAACTTTTCATGTGTTTTGGTTAAAACAAACCAGACCATTGCATTGACCCTGGACATCTTTAATTGAGAAAT TGGTAACTTTATTTTAATATGTATATCTGAAGAATTCAAGAAAACAAAGGCATCCTCAGAGGTGTGCCTCTTTTCTTTATTATTAGAGGC AAAACGAACAATTTTATAGGATTTGTAGTGAAATTATACCAGATTATAAGGAGAACCAAAACTAAGTCGCAAAATTTATTAATTTAAGGG GCTCTCGCTTTGAAAGTTTGAGAGTAAGTTACGATAGGCATTTGTATCCATTCATTACTTTCCTCTTTTCAAATAAGCAACTAAATAGAA ATGCTAATCTCAGACTTAATTATTTAACAGAAGAGTGTACCATGGAAAACCTCCAGACAAATTTCTCCTTGGTTCAGGGCTCAACTAAAA AACTGAATGGGATGGGAGATGATGGCAGCCCCCCAGCGAAAAAAATGATAACGGACATTCATGCAAATGGAAAAACGATAAACAAGGTGC CAACAGTTAAGAAGGAACACTTGGATGACTATGGAGAAGCACCAGTGGAAACTGATGGAGAGCATGTTAAGCGAACCTGTACTTCTGTTC CTGAAACTTTGCATTTAAATCCCAGTTTGAAACACACATTGGCACAATTCCATTTAAGTAGTCAGAGCTCGCTGGGTGGACCAGCAGCAT TTTCTGCTCGGCATTCCCAAGAAAGCATGTCGCCTACTGTATTTCTGCCTCTTCCATCACCTCAGGTTCTTCCTGGCCCATTGCTCATCC CTTCAGATAGCTCCACAGAACTCACTCAGACTGTGTTGGAAGGGGAATCTATTTCTTGTTTTCAAGTTGGAGGAGAAAAGAGACTCTGTT TGCCCCAAGTCTTAAATTCTGTTCTCCGAGAATTTACACTCCAGCAAATAAATACAGTGTGTGATGAACTGTACATATATTGTTCAAGGT GTACTTCAGACCAGCTTCATATCTTAAAGGTACTGGGCATACTTCCATTCAATGCCCCATCCTGTGGGCTGATTACATTAACTGATGCAC AAAGATTATGTAATGCTTTATTGCGGCCACGAACTTTTCCTCAAAATGGTAGCGTACTTCCTGCTAAAAGCTCATTGGCCCAGTTAAAGG AAACTGGCAGTGCCTTTGAAGTGGAGCATGAATGCCTAGGCAAATGTCAGGGTTTATTTGCACCCCAGTTTTATGTTCAGCCTGATGCTC CGTGTATTCAATGTCTGGAGTGTTGTGGAATGTTTGCACCCCAGACGTTTGTGATGCATTCTCACAGATCACCTGACAAAAGAACTTGCC ACTGGGGCTTTGAATCAGCTAAATGGCATTGCTATCTTCATGTGAACCAAAAATACTTAGGAACACCTGAAGAAAAGAAACTGAAGATAA TTTTAGAAGAAATGAAGGAGAAGTTTAGCATGAGAAGTGGAAAGAGAAATCAATCCAAGCTTAACCAGCTCGAAAAAGCAGTGGAAGCAG CTCACACATTTTTCGTGGCTAACCCTGAGCACATGGAAATGCAGCAGAACATTGAGAATTACAGGGCGACAGCTGGTGTTGAAGCATTGC AGTTGGTAGACAGAGAAGCCAAGCCACACATGGAGAGTTACAATGCAGGAGTTAAACATTATGAGGCTGATGACTTTGAGATGGCTATCA GGCACTTCGAACAAGCCTTAAGAGAATATTTCGTTGAAGATACAGAATGCCGGACCCTATGTGAGGGGCCTCAGAGATTTGAAGAATATG AGTATTTAGGGTATAAGGCTGGTCTGTATGAAGCTATTGCAGATCACTACATGCAGGTGCTTGTTTGTCAGCATGAATGTGTGAGGGAAC TTGCCACCCGCCCTGGCCGCCTCTCTCCCATCGAGAATTTTCTTCCTCTGCACTATGATTACCTACAGTTTGCCTACTATCGAGTTGGTG AGTATGTGAAAGCCCTGGAGTGTGCCAAAGCCTATCTTCTATGCCATCCAGATGATGAGGATGTCCTAGACAATGTGGATTACTATGAGA GTCTGCTGGATGATAGCATTGACCCGGCATCCATTGAGGCCAGAGAGGATTTAACAATGTTTGTGAAACGTCATAAGCTGGAGTCTGAGC TGATAAAATCAGCTGCAGAAGGTCTGGGGTTTTCATACACTGAACCGAATTATTGGATCAGATATGGAGGACGACAGGATGAGAATCGGG TCCCTTCAGGAGTGAACGTAGAGGGAGCAGAAGTTCATGGATTCTCAATGGGAAAAAAGCTATCACCCAAGATAGATCGAGACCTAAGAG AAGGTGGTCCTCTACTCTATGAGAACATCACATTCGTCTACAACTCGGAGCAGCTGAACGGGACTCAGCGGGTTCTCCTGGATAACGTCC TGTCGGAAGAACAGTGCCGGGAGCTCCACAGCGTGGCCAGTGGAATCATGCTTGTTGGTGATGGATACAGAGGAAAAACTTCACCCCATA CACCCAATGAAAAGTTTGAAGGTGCAACTGTCCTGAAAGCACTCAAATCTGGTTATGAAGGTCGAGTCCCACTGAAGAGCGCTCGTCTGT TTTATGACATCAGCGAAAAGGCTCGAAGGATTGTAGAATCTTATTTTATGCTGAACTCAACTCTGTATTTTTCCTATACACACATGGTCT GCCGAACAGCCCTGTCTGGTCAGCAGGATAGAAGAAATGACCTCAGTCATCCCATCCATGCTGACAACTGTTTGTTGGATCCAGAGGCCA ACGAATGCTGGAAGGAGCCTCCTGCTTACACATTTCGAGACTATAGTGCTCTCCTATATATGAATGATGACTTTGAAGGAGGAGAATTCA TATTCACAGAGATGGATGCTAAGACTGTGACTGCCTCTATAAAACCAAAATGTGGGCGCATGATCAGCTTCTCATCTGGAGGAGAGAACC CTCATGGGGTGAAGGCAGTCACCAAGGGAAAGAGGTGTGCTGTGGCTCTGTGGTTCACCTTGGACCCACTTTATAGAGAATTGGAGCGAA TACAGGCTGATGAAGTGATTGCAATTCTGGATCAAGAACAGCAAGGGAAGCATGAACTGAATATCAACCCTAAAGATGAGCTATAAAAAT GAGAAAGAATGTTCTATCAAATATTTATTTAAATTGTTAATCTTATGAGAACCTTTTTATTTTTGTACAGAGCCATGGTATAAATTAACA GGTTAATGTCAGTCATCAGATCTTCCTTCTCTTCCTAAGGATGCTTGTGTTGCCTCAATCTATCAATCTATCTTTCTTGTTTTGGGTTGT TTTCTCTCTCTCTCTCTCTCTCTCTCTTCTTAGAGACATGGTCTAACCATGTTGTCTAGGATATAGGGCAGTGGCTATTCACAGATGTGA TGATAGCACACTGGAGCCTCAAACTCTTAGGCTCAGGCGATCCTTCAAGCCTCCCGGGGAGCTGGGACCACAGGCACGTGCCACCACACC CAGCTCTCTTTCTTGGTTTTTCATCATTTCATGTATCTATCAAAGCCCAGTTCACCTCCTCCCCCAAACACACACACACACACACACACA CACACACACACACACAATTAAGTTGCTGCAAATTCAAAAGCTTAGAGAGAATAAGCTTCTTGGTGGTGAAACTACAACTCTCACGTGTGC TCCAGTTCTAAAATTAACCTGTGCCTGGTCTCTGAAGCCCTTTCTTGCTCTGTGCCTTTCAGCCACATCCTTAGGTGCTAACGGCCATGA GCTCCGACTCTCCAAAGTGAGCTCCACTTTGGGTCTGAGGAGCCCCTGGCAGAGTCCACGCTGCCTCAGGTATCATGGGCGTAATGATCA CCCAGGCTCCGGGAGATCTCATGGATGATTACTGTATGAGACAGAGGGGACTTCAGTCTTTCCAGGGCCTTGGTGGAATTTTTGGCTCTG GTGTTTTCGCCAGACAATAAACTTACACTGGAAGCTTTGATTCACCCTCCACAGTACTCCAGAAAGGACTGTCCTATAAGTTGTACACTT TAAAAGGTCATGTAGAGGTTGTAGTAGAATGGCTTTTCACCCTGGTGACTTTGGAAGAAACTCTTGAATACTGCCTGCATCCGGGCACCA TGGCCAGGTTGCCTAGGAGTGGGGTCCACTGATGAAAAGAGGTGTTTTGTACTTACATAAGAAAAATAAATTTCTGATTGATTTTAACCG TCATCTGCTTATATTTTGGGGGCCCCTCCTCATTGCTGCTATCCAGCACACAGATTTGTGCTTGTGTCTGATTTGTTTAATAAAGGGAGG >82095_82095_1_SKIL-LEPREL1_SKIL_chr3_170079217_ENST00000259119_LEPREL1_chr3_189713231_ENST00000319332_length(amino acids)=952AA_BP=404 MRVSYDRHLYPFITFLFSNKQLNRNANLRLNYLTEECTMENLQTNFSLVQGSTKKLNGMGDDGSPPAKKMITDIHANGKTINKVPTVKKE HLDDYGEAPVETDGEHVKRTCTSVPETLHLNPSLKHTLAQFHLSSQSSLGGPAAFSARHSQESMSPTVFLPLPSPQVLPGPLLIPSDSST ELTQTVLEGESISCFQVGGEKRLCLPQVLNSVLREFTLQQINTVCDELYIYCSRCTSDQLHILKVLGILPFNAPSCGLITLTDAQRLCNA LLRPRTFPQNGSVLPAKSSLAQLKETGSAFEVEHECLGKCQGLFAPQFYVQPDAPCIQCLECCGMFAPQTFVMHSHRSPDKRTCHWGFES AKWHCYLHVNQKYLGTPEEKKLKIILEEMKEKFSMRSGKRNQSKLNQLEKAVEAAHTFFVANPEHMEMQQNIENYRATAGVEALQLVDRE AKPHMESYNAGVKHYEADDFEMAIRHFEQALREYFVEDTECRTLCEGPQRFEEYEYLGYKAGLYEAIADHYMQVLVCQHECVRELATRPG RLSPIENFLPLHYDYLQFAYYRVGEYVKALECAKAYLLCHPDDEDVLDNVDYYESLLDDSIDPASIEAREDLTMFVKRHKLESELIKSAA EGLGFSYTEPNYWIRYGGRQDENRVPSGVNVEGAEVHGFSMGKKLSPKIDRDLREGGPLLYENITFVYNSEQLNGTQRVLLDNVLSEEQC RELHSVASGIMLVGDGYRGKTSPHTPNEKFEGATVLKALKSGYEGRVPLKSARLFYDISEKARRIVESYFMLNSTLYFSYTHMVCRTALS GQQDRRNDLSHPIHADNCLLDPEANECWKEPPAYTFRDYSALLYMNDDFEGGEFIFTEMDAKTVTASIKPKCGRMISFSSGGENPHGVKA -------------------------------------------------------------- >82095_82095_2_SKIL-LEPREL1_SKIL_chr3_170079217_ENST00000413427_LEPREL1_chr3_189713231_ENST00000319332_length(transcript)=4638nt_BP=1807nt GGTTTCAAATTGGCCCTTTGGCCTCTGGAGCAAATTCAAATGTAACTCTTCCCCAACCCCCCTTCTCTTCTTCCAGATTAATTAAAAGAA GAATGAACTATAATCCTTGAAGATAACTGGGCAATTTTTTAAGTCGGAGGCTGTTCTTACTGGTGTGAGGATTTACACACGTCTTCAGTT TTTCAGCACAGACCAGCAGACCATCATTTTTAGAGGAAATACTCCCTCTGCCCTCCTTTTTGGTTTCCTTGGTGGTAAAGATTAAATTTG GTTGCATCATTTTGACTTGTGTTTGAGTCTAGATTTTATGGCACAAGGAATGGCATAAACTTTTCATGTGTTTTGGTTAAAACAAACCAG ACCATTGCATTGACCCTGGACATCTTTAATTGAGAAATTGGTAACTTTATTTTAATATGTATATCTGAAGAATTCAAGAAAACAAAGGCA TCCTCAGAGGTGTGCCTCTTTTCTTTATTATTAGAGGCAAAACGAACAATTTTATAGGATTTGTAGTGAAATTATACCAGATTATAAGGA GAACCAAAACTAAGTCGCAAAATTTATTAATTTAAGGGGCTCTCGCTTTGAAAGTTTGAGAGTAAGTTACGATAGGCATTTGTATCCATT CATTACTTTCCTCTTTTCAAATAAGCAACTAAATAGAAATGCTAATCTCAGACTTAATTATTTAACAGAAGAGTGTACCATGGAAAACCT CCAGACAAATTTCTCCTTGGTTCAGGGCTCAACTAAAAAACTGAATGGGATGGGAGATGATGGCAGCCCCCCAGCGAAAAAAATGATAAC GGACATTCATGCAAATGGAAAAACGATAAACAAGGTGCCAACAGTTAAGAAGGAACACTTGGATGACTATGGAGAAGCACCAGTGGAAAC TGATGGAGAGCATGTTAAGCGAACCTGTACTTCTGTTCCTGAAACTTTGCATTTAAATCCCAGTTTGAAACACACATTGGCACAATTCCA TTTAAGTAGTCAGAGCTCGCTGGGTGGACCAGCAGCATTTTCTGCTCGGCATTCCCAAGAAAGCATGTCGCCTACTGTATTTCTGCCTCT TCCATCACCTCAGGTTCTTCCTGGCCCATTGCTCATCCCTTCAGATAGCTCCACAGAACTCACTCAGACTGTGTTGGAAGGGGAATCTAT TTCTTGTTTTCAAGTTGGAGGAGAAAAGAGACTCTGTTTGCCCCAAGTCTTAAATTCTGTTCTCCGAGAATTTACACTCCAGCAAATAAA TACAGTGTGTGATGAACTGTACATATATTGTTCAAGGTGTACTTCAGACCAGCTTCATATCTTAAAGGTACTGGGCATACTTCCATTCAA TGCCCCATCCTGTGGGCTGATTACATTAACTGATGCACAAAGATTATGTAATGCTTTATTGCGGCCACGAACTTTTCCTCAAAATGGTAG CGTACTTCCTGCTAAAAGCTCATTGGCCCAGTTAAAGGAAACTGGCAGTGCCTTTGAAGTGGAGCATGAATGCCTAGGCAAATGTCAGGG TTTATTTGCACCCCAGTTTTATGTTCAGCCTGATGCTCCGTGTATTCAATGTCTGGAGTGTTGTGGAATGTTTGCACCCCAGACGTTTGT GATGCATTCTCACAGATCACCTGACAAAAGAACTTGCCACTGGGGCTTTGAATCAGCTAAATGGCATTGCTATCTTCATGTGAACCAAAA ATACTTAGGAACACCTGAAGAAAAGAAACTGAAGATAATTTTAGAAGAAATGAAGGAGAAGTTTAGCATGAGAAGTGGAAAGAGAAATCA ATCCAAGCTTAACCAGCTCGAAAAAGCAGTGGAAGCAGCTCACACATTTTTCGTGGCTAACCCTGAGCACATGGAAATGCAGCAGAACAT TGAGAATTACAGGGCGACAGCTGGTGTTGAAGCATTGCAGTTGGTAGACAGAGAAGCCAAGCCACACATGGAGAGTTACAATGCAGGAGT TAAACATTATGAGGCTGATGACTTTGAGATGGCTATCAGGCACTTCGAACAAGCCTTAAGAGAATATTTCGTTGAAGATACAGAATGCCG GACCCTATGTGAGGGGCCTCAGAGATTTGAAGAATATGAGTATTTAGGGTATAAGGCTGGTCTGTATGAAGCTATTGCAGATCACTACAT GCAGGTGCTTGTTTGTCAGCATGAATGTGTGAGGGAACTTGCCACCCGCCCTGGCCGCCTCTCTCCCATCGAGAATTTTCTTCCTCTGCA CTATGATTACCTACAGTTTGCCTACTATCGAGTTGGTGAGTATGTGAAAGCCCTGGAGTGTGCCAAAGCCTATCTTCTATGCCATCCAGA TGATGAGGATGTCCTAGACAATGTGGATTACTATGAGAGTCTGCTGGATGATAGCATTGACCCGGCATCCATTGAGGCCAGAGAGGATTT AACAATGTTTGTGAAACGTCATAAGCTGGAGTCTGAGCTGATAAAATCAGCTGCAGAAGGTCTGGGGTTTTCATACACTGAACCGAATTA TTGGATCAGATATGGAGGACGACAGGATGAGAATCGGGTCCCTTCAGGAGTGAACGTAGAGGGAGCAGAAGTTCATGGATTCTCAATGGG AAAAAAGCTATCACCCAAGATAGATCGAGACCTAAGAGAAGGTGGTCCTCTACTCTATGAGAACATCACATTCGTCTACAACTCGGAGCA GCTGAACGGGACTCAGCGGGTTCTCCTGGATAACGTCCTGTCGGAAGAACAGTGCCGGGAGCTCCACAGCGTGGCCAGTGGAATCATGCT TGTTGGTGATGGATACAGAGGAAAAACTTCACCCCATACACCCAATGAAAAGTTTGAAGGTGCAACTGTCCTGAAAGCACTCAAATCTGG TTATGAAGGTCGAGTCCCACTGAAGAGCGCTCGTCTGTTTTATGACATCAGCGAAAAGGCTCGAAGGATTGTAGAATCTTATTTTATGCT GAACTCAACTCTGTATTTTTCCTATACACACATGGTCTGCCGAACAGCCCTGTCTGGTCAGCAGGATAGAAGAAATGACCTCAGTCATCC CATCCATGCTGACAACTGTTTGTTGGATCCAGAGGCCAACGAATGCTGGAAGGAGCCTCCTGCTTACACATTTCGAGACTATAGTGCTCT CCTATATATGAATGATGACTTTGAAGGAGGAGAATTCATATTCACAGAGATGGATGCTAAGACTGTGACTGCCTCTATAAAACCAAAATG TGGGCGCATGATCAGCTTCTCATCTGGAGGAGAGAACCCTCATGGGGTGAAGGCAGTCACCAAGGGAAAGAGGTGTGCTGTGGCTCTGTG GTTCACCTTGGACCCACTTTATAGAGAATTGGAGCGAATACAGGCTGATGAAGTGATTGCAATTCTGGATCAAGAACAGCAAGGGAAGCA TGAACTGAATATCAACCCTAAAGATGAGCTATAAAAATGAGAAAGAATGTTCTATCAAATATTTATTTAAATTGTTAATCTTATGAGAAC CTTTTTATTTTTGTACAGAGCCATGGTATAAATTAACAGGTTAATGTCAGTCATCAGATCTTCCTTCTCTTCCTAAGGATGCTTGTGTTG CCTCAATCTATCAATCTATCTTTCTTGTTTTGGGTTGTTTTCTCTCTCTCTCTCTCTCTCTCTCTTCTTAGAGACATGGTCTAACCATGT TGTCTAGGATATAGGGCAGTGGCTATTCACAGATGTGATGATAGCACACTGGAGCCTCAAACTCTTAGGCTCAGGCGATCCTTCAAGCCT CCCGGGGAGCTGGGACCACAGGCACGTGCCACCACACCCAGCTCTCTTTCTTGGTTTTTCATCATTTCATGTATCTATCAAAGCCCAGTT CACCTCCTCCCCCAAACACACACACACACACACACACACACACACACACACACAATTAAGTTGCTGCAAATTCAAAAGCTTAGAGAGAAT AAGCTTCTTGGTGGTGAAACTACAACTCTCACGTGTGCTCCAGTTCTAAAATTAACCTGTGCCTGGTCTCTGAAGCCCTTTCTTGCTCTG TGCCTTTCAGCCACATCCTTAGGTGCTAACGGCCATGAGCTCCGACTCTCCAAAGTGAGCTCCACTTTGGGTCTGAGGAGCCCCTGGCAG AGTCCACGCTGCCTCAGGTATCATGGGCGTAATGATCACCCAGGCTCCGGGAGATCTCATGGATGATTACTGTATGAGACAGAGGGGACT TCAGTCTTTCCAGGGCCTTGGTGGAATTTTTGGCTCTGGTGTTTTCGCCAGACAATAAACTTACACTGGAAGCTTTGATTCACCCTCCAC AGTACTCCAGAAAGGACTGTCCTATAAGTTGTACACTTTAAAAGGTCATGTAGAGGTTGTAGTAGAATGGCTTTTCACCCTGGTGACTTT GGAAGAAACTCTTGAATACTGCCTGCATCCGGGCACCATGGCCAGGTTGCCTAGGAGTGGGGTCCACTGATGAAAAGAGGTGTTTTGTAC TTACATAAGAAAAATAAATTTCTGATTGATTTTAACCGTCATCTGCTTATATTTTGGGGGCCCCTCCTCATTGCTGCTATCCAGCACACA >82095_82095_2_SKIL-LEPREL1_SKIL_chr3_170079217_ENST00000413427_LEPREL1_chr3_189713231_ENST00000319332_length(amino acids)=952AA_BP=404 MRVSYDRHLYPFITFLFSNKQLNRNANLRLNYLTEECTMENLQTNFSLVQGSTKKLNGMGDDGSPPAKKMITDIHANGKTINKVPTVKKE HLDDYGEAPVETDGEHVKRTCTSVPETLHLNPSLKHTLAQFHLSSQSSLGGPAAFSARHSQESMSPTVFLPLPSPQVLPGPLLIPSDSST ELTQTVLEGESISCFQVGGEKRLCLPQVLNSVLREFTLQQINTVCDELYIYCSRCTSDQLHILKVLGILPFNAPSCGLITLTDAQRLCNA LLRPRTFPQNGSVLPAKSSLAQLKETGSAFEVEHECLGKCQGLFAPQFYVQPDAPCIQCLECCGMFAPQTFVMHSHRSPDKRTCHWGFES AKWHCYLHVNQKYLGTPEEKKLKIILEEMKEKFSMRSGKRNQSKLNQLEKAVEAAHTFFVANPEHMEMQQNIENYRATAGVEALQLVDRE AKPHMESYNAGVKHYEADDFEMAIRHFEQALREYFVEDTECRTLCEGPQRFEEYEYLGYKAGLYEAIADHYMQVLVCQHECVRELATRPG RLSPIENFLPLHYDYLQFAYYRVGEYVKALECAKAYLLCHPDDEDVLDNVDYYESLLDDSIDPASIEAREDLTMFVKRHKLESELIKSAA EGLGFSYTEPNYWIRYGGRQDENRVPSGVNVEGAEVHGFSMGKKLSPKIDRDLREGGPLLYENITFVYNSEQLNGTQRVLLDNVLSEEQC RELHSVASGIMLVGDGYRGKTSPHTPNEKFEGATVLKALKSGYEGRVPLKSARLFYDISEKARRIVESYFMLNSTLYFSYTHMVCRTALS GQQDRRNDLSHPIHADNCLLDPEANECWKEPPAYTFRDYSALLYMNDDFEGGEFIFTEMDAKTVTASIKPKCGRMISFSSGGENPHGVKA -------------------------------------------------------------- >82095_82095_3_SKIL-LEPREL1_SKIL_chr3_170079217_ENST00000426052_LEPREL1_chr3_189713231_ENST00000319332_length(transcript)=4101nt_BP=1270nt GAGCGGCGACGGCGGCGGCGGCGGGCACAGATTAATTAAAAGAAGAATGAACTATAATCCTTGAAGATAACTGGGCAATTTTTTAAGTCG GAGGCTGTTCTTACTGGTGTGAGGATTTACACACGTCTTCAGTTTTTCAGCACAGACCAGCAGACCATCATTTTTAGAGGAAATACTCCC TCTGCCCTCCTTTTTGGTTTCCTTGGTGGGCTCAACTAAAAAACTGAATGGGATGGGAGATGATGGCAGCCCCCCAGCGAAAAAAATGAT AACGGACATTCATGCAAATGGAAAAACGATAAACAAGGTGCCAACAGTTAAGAAGGAACACTTGGATGACTATGGAGAAGCACCAGTGGA AACTGATGGAGAGCATGTTAAGCGAACCTGTACTTCTGTTCCTGAAACTTTGCATTTAAATCCCAGTTTGAAACACACATTGGCACAATT CCATTTAAGTAGTCAGAGCTCGCTGGGTGGACCAGCAGCATTTTCTGCTCGGCATTCCCAAGAAAGCATGTCGCCTACTGTATTTCTGCC TCTTCCATCACCTCAGGTTCTTCCTGGCCCATTGCTCATCCCTTCAGATAGCTCCACAGAACTCACTCAGACTGTGTTGGAAGGGGAATC TATTTCTTGTTTTCAAGTTGGAGGAGAAAAGAGACTCTGTTTGCCCCAAGTCTTAAATTCTGTTCTCCGAGAATTTACACTCCAGCAAAT AAATACAGTGTGTGATGAACTGTACATATATTGTTCAAGGTGTACTTCAGACCAGCTTCATATCTTAAAGGTACTGGGCATACTTCCATT CAATGCCCCATCCTGTGGGCTGATTACATTAACTGATGCACAAAGATTATGTAATGCTTTATTGCGGCCACGAACTTTTCCTCAAAATGG TAGCGTACTTCCTGCTAAAAGCTCATTGGCCCAGTTAAAGGAAACTGGCAGTGCCTTTGAAGTGGAGCATGAATGCCTAGGCAAATGTCA GGGTTTATTTGCACCCCAGTTTTATGTTCAGCCTGATGCTCCGTGTATTCAATGTCTGGAGTGTTGTGGAATGTTTGCACCCCAGACGTT TGTGATGCATTCTCACAGATCACCTGACAAAAGAACTTGCCACTGGGGCTTTGAATCAGCTAAATGGCATTGCTATCTTCATGTGAACCA AAAATACTTAGGAACACCTGAAGAAAAGAAACTGAAGATAATTTTAGAAGAAATGAAGGAGAAGTTTAGCATGAGAAGTGGAAAGAGAAA TCAATCCAAGCTTAACCAGCTCGAAAAAGCAGTGGAAGCAGCTCACACATTTTTCGTGGCTAACCCTGAGCACATGGAAATGCAGCAGAA CATTGAGAATTACAGGGCGACAGCTGGTGTTGAAGCATTGCAGTTGGTAGACAGAGAAGCCAAGCCACACATGGAGAGTTACAATGCAGG AGTTAAACATTATGAGGCTGATGACTTTGAGATGGCTATCAGGCACTTCGAACAAGCCTTAAGAGAATATTTCGTTGAAGATACAGAATG CCGGACCCTATGTGAGGGGCCTCAGAGATTTGAAGAATATGAGTATTTAGGGTATAAGGCTGGTCTGTATGAAGCTATTGCAGATCACTA CATGCAGGTGCTTGTTTGTCAGCATGAATGTGTGAGGGAACTTGCCACCCGCCCTGGCCGCCTCTCTCCCATCGAGAATTTTCTTCCTCT GCACTATGATTACCTACAGTTTGCCTACTATCGAGTTGGTGAGTATGTGAAAGCCCTGGAGTGTGCCAAAGCCTATCTTCTATGCCATCC AGATGATGAGGATGTCCTAGACAATGTGGATTACTATGAGAGTCTGCTGGATGATAGCATTGACCCGGCATCCATTGAGGCCAGAGAGGA TTTAACAATGTTTGTGAAACGTCATAAGCTGGAGTCTGAGCTGATAAAATCAGCTGCAGAAGGTCTGGGGTTTTCATACACTGAACCGAA TTATTGGATCAGATATGGAGGACGACAGGATGAGAATCGGGTCCCTTCAGGAGTGAACGTAGAGGGAGCAGAAGTTCATGGATTCTCAAT GGGAAAAAAGCTATCACCCAAGATAGATCGAGACCTAAGAGAAGGTGGTCCTCTACTCTATGAGAACATCACATTCGTCTACAACTCGGA GCAGCTGAACGGGACTCAGCGGGTTCTCCTGGATAACGTCCTGTCGGAAGAACAGTGCCGGGAGCTCCACAGCGTGGCCAGTGGAATCAT GCTTGTTGGTGATGGATACAGAGGAAAAACTTCACCCCATACACCCAATGAAAAGTTTGAAGGTGCAACTGTCCTGAAAGCACTCAAATC TGGTTATGAAGGTCGAGTCCCACTGAAGAGCGCTCGTCTGTTTTATGACATCAGCGAAAAGGCTCGAAGGATTGTAGAATCTTATTTTAT GCTGAACTCAACTCTGTATTTTTCCTATACACACATGGTCTGCCGAACAGCCCTGTCTGGTCAGCAGGATAGAAGAAATGACCTCAGTCA TCCCATCCATGCTGACAACTGTTTGTTGGATCCAGAGGCCAACGAATGCTGGAAGGAGCCTCCTGCTTACACATTTCGAGACTATAGTGC TCTCCTATATATGAATGATGACTTTGAAGGAGGAGAATTCATATTCACAGAGATGGATGCTAAGACTGTGACTGCCTCTATAAAACCAAA ATGTGGGCGCATGATCAGCTTCTCATCTGGAGGAGAGAACCCTCATGGGGTGAAGGCAGTCACCAAGGGAAAGAGGTGTGCTGTGGCTCT GTGGTTCACCTTGGACCCACTTTATAGAGAATTGGAGCGAATACAGGCTGATGAAGTGATTGCAATTCTGGATCAAGAACAGCAAGGGAA GCATGAACTGAATATCAACCCTAAAGATGAGCTATAAAAATGAGAAAGAATGTTCTATCAAATATTTATTTAAATTGTTAATCTTATGAG AACCTTTTTATTTTTGTACAGAGCCATGGTATAAATTAACAGGTTAATGTCAGTCATCAGATCTTCCTTCTCTTCCTAAGGATGCTTGTG TTGCCTCAATCTATCAATCTATCTTTCTTGTTTTGGGTTGTTTTCTCTCTCTCTCTCTCTCTCTCTCTTCTTAGAGACATGGTCTAACCA TGTTGTCTAGGATATAGGGCAGTGGCTATTCACAGATGTGATGATAGCACACTGGAGCCTCAAACTCTTAGGCTCAGGCGATCCTTCAAG CCTCCCGGGGAGCTGGGACCACAGGCACGTGCCACCACACCCAGCTCTCTTTCTTGGTTTTTCATCATTTCATGTATCTATCAAAGCCCA GTTCACCTCCTCCCCCAAACACACACACACACACACACACACACACACACACACACAATTAAGTTGCTGCAAATTCAAAAGCTTAGAGAG AATAAGCTTCTTGGTGGTGAAACTACAACTCTCACGTGTGCTCCAGTTCTAAAATTAACCTGTGCCTGGTCTCTGAAGCCCTTTCTTGCT CTGTGCCTTTCAGCCACATCCTTAGGTGCTAACGGCCATGAGCTCCGACTCTCCAAAGTGAGCTCCACTTTGGGTCTGAGGAGCCCCTGG CAGAGTCCACGCTGCCTCAGGTATCATGGGCGTAATGATCACCCAGGCTCCGGGAGATCTCATGGATGATTACTGTATGAGACAGAGGGG ACTTCAGTCTTTCCAGGGCCTTGGTGGAATTTTTGGCTCTGGTGTTTTCGCCAGACAATAAACTTACACTGGAAGCTTTGATTCACCCTC CACAGTACTCCAGAAAGGACTGTCCTATAAGTTGTACACTTTAAAAGGTCATGTAGAGGTTGTAGTAGAATGGCTTTTCACCCTGGTGAC TTTGGAAGAAACTCTTGAATACTGCCTGCATCCGGGCACCATGGCCAGGTTGCCTAGGAGTGGGGTCCACTGATGAAAAGAGGTGTTTTG TACTTACATAAGAAAAATAAATTTCTGATTGATTTTAACCGTCATCTGCTTATATTTTGGGGGCCCCTCCTCATTGCTGCTATCCAGCAC >82095_82095_3_SKIL-LEPREL1_SKIL_chr3_170079217_ENST00000426052_LEPREL1_chr3_189713231_ENST00000319332_length(amino acids)=911AA_BP=363 MPSFLVSLVGSTKKLNGMGDDGSPPAKKMITDIHANGKTINKVPTVKKEHLDDYGEAPVETDGEHVKRTCTSVPETLHLNPSLKHTLAQF HLSSQSSLGGPAAFSARHSQESMSPTVFLPLPSPQVLPGPLLIPSDSSTELTQTVLEGESISCFQVGGEKRLCLPQVLNSVLREFTLQQI NTVCDELYIYCSRCTSDQLHILKVLGILPFNAPSCGLITLTDAQRLCNALLRPRTFPQNGSVLPAKSSLAQLKETGSAFEVEHECLGKCQ GLFAPQFYVQPDAPCIQCLECCGMFAPQTFVMHSHRSPDKRTCHWGFESAKWHCYLHVNQKYLGTPEEKKLKIILEEMKEKFSMRSGKRN QSKLNQLEKAVEAAHTFFVANPEHMEMQQNIENYRATAGVEALQLVDREAKPHMESYNAGVKHYEADDFEMAIRHFEQALREYFVEDTEC RTLCEGPQRFEEYEYLGYKAGLYEAIADHYMQVLVCQHECVRELATRPGRLSPIENFLPLHYDYLQFAYYRVGEYVKALECAKAYLLCHP DDEDVLDNVDYYESLLDDSIDPASIEAREDLTMFVKRHKLESELIKSAAEGLGFSYTEPNYWIRYGGRQDENRVPSGVNVEGAEVHGFSM GKKLSPKIDRDLREGGPLLYENITFVYNSEQLNGTQRVLLDNVLSEEQCRELHSVASGIMLVGDGYRGKTSPHTPNEKFEGATVLKALKS GYEGRVPLKSARLFYDISEKARRIVESYFMLNSTLYFSYTHMVCRTALSGQQDRRNDLSHPIHADNCLLDPEANECWKEPPAYTFRDYSA LLYMNDDFEGGEFIFTEMDAKTVTASIKPKCGRMISFSSGGENPHGVKAVTKGKRCAVALWFTLDPLYRELERIQADEVIAILDQEQQGK -------------------------------------------------------------- >82095_82095_4_SKIL-LEPREL1_SKIL_chr3_170079217_ENST00000458537_LEPREL1_chr3_189713231_ENST00000319332_length(transcript)=4638nt_BP=1807nt GGTTTCAAATTGGCCCTTTGGCCTCTGGAGCAAATTCAAATGTAACTCTTCCCCAACCCCCCTTCTCTTCTTCCAGATTAATTAAAAGAA GAATGAACTATAATCCTTGAAGATAACTGGGCAATTTTTTAAGTCGGAGGCTGTTCTTACTGGTGTGAGGATTTACACACGTCTTCAGTT TTTCAGCACAGACCAGCAGACCATCATTTTTAGAGGAAATACTCCCTCTGCCCTCCTTTTTGGTTTCCTTGGTGGTAAAGATTAAATTTG GTTGCATCATTTTGACTTGTGTTTGAGTCTAGATTTTATGGCACAAGGAATGGCATAAACTTTTCATGTGTTTTGGTTAAAACAAACCAG ACCATTGCATTGACCCTGGACATCTTTAATTGAGAAATTGGTAACTTTATTTTAATATGTATATCTGAAGAATTCAAGAAAACAAAGGCA TCCTCAGAGGTGTGCCTCTTTTCTTTATTATTAGAGGCAAAACGAACAATTTTATAGGATTTGTAGTGAAATTATACCAGATTATAAGGA GAACCAAAACTAAGTCGCAAAATTTATTAATTTAAGGGGCTCTCGCTTTGAAAGTTTGAGAGTAAGTTACGATAGGCATTTGTATCCATT CATTACTTTCCTCTTTTCAAATAAGCAACTAAATAGAAATGCTAATCTCAGACTTAATTATTTAACAGAAGAGTGTACCATGGAAAACCT CCAGACAAATTTCTCCTTGGTTCAGGGCTCAACTAAAAAACTGAATGGGATGGGAGATGATGGCAGCCCCCCAGCGAAAAAAATGATAAC GGACATTCATGCAAATGGAAAAACGATAAACAAGGTGCCAACAGTTAAGAAGGAACACTTGGATGACTATGGAGAAGCACCAGTGGAAAC TGATGGAGAGCATGTTAAGCGAACCTGTACTTCTGTTCCTGAAACTTTGCATTTAAATCCCAGTTTGAAACACACATTGGCACAATTCCA TTTAAGTAGTCAGAGCTCGCTGGGTGGACCAGCAGCATTTTCTGCTCGGCATTCCCAAGAAAGCATGTCGCCTACTGTATTTCTGCCTCT TCCATCACCTCAGGTTCTTCCTGGCCCATTGCTCATCCCTTCAGATAGCTCCACAGAACTCACTCAGACTGTGTTGGAAGGGGAATCTAT TTCTTGTTTTCAAGTTGGAGGAGAAAAGAGACTCTGTTTGCCCCAAGTCTTAAATTCTGTTCTCCGAGAATTTACACTCCAGCAAATAAA TACAGTGTGTGATGAACTGTACATATATTGTTCAAGGTGTACTTCAGACCAGCTTCATATCTTAAAGGTACTGGGCATACTTCCATTCAA TGCCCCATCCTGTGGGCTGATTACATTAACTGATGCACAAAGATTATGTAATGCTTTATTGCGGCCACGAACTTTTCCTCAAAATGGTAG CGTACTTCCTGCTAAAAGCTCATTGGCCCAGTTAAAGGAAACTGGCAGTGCCTTTGAAGTGGAGCATGAATGCCTAGGCAAATGTCAGGG TTTATTTGCACCCCAGTTTTATGTTCAGCCTGATGCTCCGTGTATTCAATGTCTGGAGTGTTGTGGAATGTTTGCACCCCAGACGTTTGT GATGCATTCTCACAGATCACCTGACAAAAGAACTTGCCACTGGGGCTTTGAATCAGCTAAATGGCATTGCTATCTTCATGTGAACCAAAA ATACTTAGGAACACCTGAAGAAAAGAAACTGAAGATAATTTTAGAAGAAATGAAGGAGAAGTTTAGCATGAGAAGTGGAAAGAGAAATCA ATCCAAGCTTAACCAGCTCGAAAAAGCAGTGGAAGCAGCTCACACATTTTTCGTGGCTAACCCTGAGCACATGGAAATGCAGCAGAACAT TGAGAATTACAGGGCGACAGCTGGTGTTGAAGCATTGCAGTTGGTAGACAGAGAAGCCAAGCCACACATGGAGAGTTACAATGCAGGAGT TAAACATTATGAGGCTGATGACTTTGAGATGGCTATCAGGCACTTCGAACAAGCCTTAAGAGAATATTTCGTTGAAGATACAGAATGCCG GACCCTATGTGAGGGGCCTCAGAGATTTGAAGAATATGAGTATTTAGGGTATAAGGCTGGTCTGTATGAAGCTATTGCAGATCACTACAT GCAGGTGCTTGTTTGTCAGCATGAATGTGTGAGGGAACTTGCCACCCGCCCTGGCCGCCTCTCTCCCATCGAGAATTTTCTTCCTCTGCA CTATGATTACCTACAGTTTGCCTACTATCGAGTTGGTGAGTATGTGAAAGCCCTGGAGTGTGCCAAAGCCTATCTTCTATGCCATCCAGA TGATGAGGATGTCCTAGACAATGTGGATTACTATGAGAGTCTGCTGGATGATAGCATTGACCCGGCATCCATTGAGGCCAGAGAGGATTT AACAATGTTTGTGAAACGTCATAAGCTGGAGTCTGAGCTGATAAAATCAGCTGCAGAAGGTCTGGGGTTTTCATACACTGAACCGAATTA TTGGATCAGATATGGAGGACGACAGGATGAGAATCGGGTCCCTTCAGGAGTGAACGTAGAGGGAGCAGAAGTTCATGGATTCTCAATGGG AAAAAAGCTATCACCCAAGATAGATCGAGACCTAAGAGAAGGTGGTCCTCTACTCTATGAGAACATCACATTCGTCTACAACTCGGAGCA GCTGAACGGGACTCAGCGGGTTCTCCTGGATAACGTCCTGTCGGAAGAACAGTGCCGGGAGCTCCACAGCGTGGCCAGTGGAATCATGCT TGTTGGTGATGGATACAGAGGAAAAACTTCACCCCATACACCCAATGAAAAGTTTGAAGGTGCAACTGTCCTGAAAGCACTCAAATCTGG TTATGAAGGTCGAGTCCCACTGAAGAGCGCTCGTCTGTTTTATGACATCAGCGAAAAGGCTCGAAGGATTGTAGAATCTTATTTTATGCT GAACTCAACTCTGTATTTTTCCTATACACACATGGTCTGCCGAACAGCCCTGTCTGGTCAGCAGGATAGAAGAAATGACCTCAGTCATCC CATCCATGCTGACAACTGTTTGTTGGATCCAGAGGCCAACGAATGCTGGAAGGAGCCTCCTGCTTACACATTTCGAGACTATAGTGCTCT CCTATATATGAATGATGACTTTGAAGGAGGAGAATTCATATTCACAGAGATGGATGCTAAGACTGTGACTGCCTCTATAAAACCAAAATG TGGGCGCATGATCAGCTTCTCATCTGGAGGAGAGAACCCTCATGGGGTGAAGGCAGTCACCAAGGGAAAGAGGTGTGCTGTGGCTCTGTG GTTCACCTTGGACCCACTTTATAGAGAATTGGAGCGAATACAGGCTGATGAAGTGATTGCAATTCTGGATCAAGAACAGCAAGGGAAGCA TGAACTGAATATCAACCCTAAAGATGAGCTATAAAAATGAGAAAGAATGTTCTATCAAATATTTATTTAAATTGTTAATCTTATGAGAAC CTTTTTATTTTTGTACAGAGCCATGGTATAAATTAACAGGTTAATGTCAGTCATCAGATCTTCCTTCTCTTCCTAAGGATGCTTGTGTTG CCTCAATCTATCAATCTATCTTTCTTGTTTTGGGTTGTTTTCTCTCTCTCTCTCTCTCTCTCTCTTCTTAGAGACATGGTCTAACCATGT TGTCTAGGATATAGGGCAGTGGCTATTCACAGATGTGATGATAGCACACTGGAGCCTCAAACTCTTAGGCTCAGGCGATCCTTCAAGCCT CCCGGGGAGCTGGGACCACAGGCACGTGCCACCACACCCAGCTCTCTTTCTTGGTTTTTCATCATTTCATGTATCTATCAAAGCCCAGTT CACCTCCTCCCCCAAACACACACACACACACACACACACACACACACACACACAATTAAGTTGCTGCAAATTCAAAAGCTTAGAGAGAAT AAGCTTCTTGGTGGTGAAACTACAACTCTCACGTGTGCTCCAGTTCTAAAATTAACCTGTGCCTGGTCTCTGAAGCCCTTTCTTGCTCTG TGCCTTTCAGCCACATCCTTAGGTGCTAACGGCCATGAGCTCCGACTCTCCAAAGTGAGCTCCACTTTGGGTCTGAGGAGCCCCTGGCAG AGTCCACGCTGCCTCAGGTATCATGGGCGTAATGATCACCCAGGCTCCGGGAGATCTCATGGATGATTACTGTATGAGACAGAGGGGACT TCAGTCTTTCCAGGGCCTTGGTGGAATTTTTGGCTCTGGTGTTTTCGCCAGACAATAAACTTACACTGGAAGCTTTGATTCACCCTCCAC AGTACTCCAGAAAGGACTGTCCTATAAGTTGTACACTTTAAAAGGTCATGTAGAGGTTGTAGTAGAATGGCTTTTCACCCTGGTGACTTT GGAAGAAACTCTTGAATACTGCCTGCATCCGGGCACCATGGCCAGGTTGCCTAGGAGTGGGGTCCACTGATGAAAAGAGGTGTTTTGTAC TTACATAAGAAAAATAAATTTCTGATTGATTTTAACCGTCATCTGCTTATATTTTGGGGGCCCCTCCTCATTGCTGCTATCCAGCACACA >82095_82095_4_SKIL-LEPREL1_SKIL_chr3_170079217_ENST00000458537_LEPREL1_chr3_189713231_ENST00000319332_length(amino acids)=952AA_BP=404 MRVSYDRHLYPFITFLFSNKQLNRNANLRLNYLTEECTMENLQTNFSLVQGSTKKLNGMGDDGSPPAKKMITDIHANGKTINKVPTVKKE HLDDYGEAPVETDGEHVKRTCTSVPETLHLNPSLKHTLAQFHLSSQSSLGGPAAFSARHSQESMSPTVFLPLPSPQVLPGPLLIPSDSST ELTQTVLEGESISCFQVGGEKRLCLPQVLNSVLREFTLQQINTVCDELYIYCSRCTSDQLHILKVLGILPFNAPSCGLITLTDAQRLCNA LLRPRTFPQNGSVLPAKSSLAQLKETGSAFEVEHECLGKCQGLFAPQFYVQPDAPCIQCLECCGMFAPQTFVMHSHRSPDKRTCHWGFES AKWHCYLHVNQKYLGTPEEKKLKIILEEMKEKFSMRSGKRNQSKLNQLEKAVEAAHTFFVANPEHMEMQQNIENYRATAGVEALQLVDRE AKPHMESYNAGVKHYEADDFEMAIRHFEQALREYFVEDTECRTLCEGPQRFEEYEYLGYKAGLYEAIADHYMQVLVCQHECVRELATRPG RLSPIENFLPLHYDYLQFAYYRVGEYVKALECAKAYLLCHPDDEDVLDNVDYYESLLDDSIDPASIEAREDLTMFVKRHKLESELIKSAA EGLGFSYTEPNYWIRYGGRQDENRVPSGVNVEGAEVHGFSMGKKLSPKIDRDLREGGPLLYENITFVYNSEQLNGTQRVLLDNVLSEEQC RELHSVASGIMLVGDGYRGKTSPHTPNEKFEGATVLKALKSGYEGRVPLKSARLFYDISEKARRIVESYFMLNSTLYFSYTHMVCRTALS GQQDRRNDLSHPIHADNCLLDPEANECWKEPPAYTFRDYSALLYMNDDFEGGEFIFTEMDAKTVTASIKPKCGRMISFSSGGENPHGVKA -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for SKIL-LEPREL1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for SKIL-LEPREL1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for SKIL-LEPREL1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |