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	Fusion Gene Summary
	Fusion Gene ORF analysis
	Fusion Genomic Features
	Fusion Protein Features
	Fusion Gene Sequence
	Fusion Gene PPI analysis
	Related Drugs
	Related Diseases

Fusion gene:SKIV2L-C2 (FusionGDB2 ID:82143)

Fusion Gene Summary for SKIV2L-C2

Fusion gene summary

Fusion gene information	Fusion gene name: SKIV2L-C2
	Fusion gene ID: 82143
		Hgene	Tgene
	Gene symbol	SKIV2L	C2
	Gene ID	6499	3183
	Gene name	Ski2 like RNA helicase	heterogeneous nuclear ribonucleoprotein C
	Synonyms	170A\|DDX13\|HLP\|SKI2\|SKI2W\|SKIV2\|SKIV2L1\|THES2	C1\|C2\|HNRNP\|HNRPC\|SNRPC
	Cytomap	6p21.33	14q11.2
	Type of gene	protein-coding	protein-coding
	Description	helicase SKI2WSKI2 homolog, superkiller viralicidic activity 2-likehelicase-like proteinsuperkiller viralicidic activity 2-like	heterogeneous nuclear ribonucleoproteins C1/C2heterogeneous nuclear ribonucleoprotein C (C1/C2)hnRNP C1/C2nuclear ribonucleoprotein particle C1 proteinnuclear ribonucleoprotein particle C2 protein
	Modification date	20200313	20200322
	UniProtAcc	.	Q6ZV80
	Ensembl transtripts involved in fusion gene	ENST00000375394, ENST00000544581, ENST00000383336, ENST00000412823, ENST00000421789, ENST00000429465, ENST00000448219, ENST00000461360, ENST00000466463, ENST00000471547, ENST00000476338, ENST00000480914, ENST00000488648,	ENST00000299367, ENST00000375510, ENST00000383359, ENST00000383362, ENST00000383367, ENST00000411803, ENST00000413548, ENST00000416252, ENST00000418949, ENST00000419062, ENST00000423826, ENST00000428140, ENST00000442278, ENST00000448206, ENST00000452323, ENST00000452763, ENST00000468407, ENST00000469372, ENST00000475544, ENST00000476210, ENST00000489229, ENST00000491080, ENST00000491097, ENST00000498138, ENST00000547984, ENST00000548250, ENST00000548500, ENST00000548828, ENST00000548973, ENST00000548995, ENST00000549222, ENST00000549972, ENST00000549997, ENST00000550045, ENST00000550129, ENST00000550363, ENST00000550682, ENST00000551081, ENST00000551648, ENST00000552638,
Fusion gene scores	* DoF score	6 X 5 X 5=150	10 X 6 X 6=360
	# samples	6	27
	** MAII score	log2(6/150*10)=-1.32192809488736 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0	log2(27/360*10)=-0.415037499278844 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0
Context	PubMed: SKIV2L [Title/Abstract] AND C2 [Title/Abstract] AND fusion [Title/Abstract]
Most frequent breakpoint	SKIV2L(31936300)-C2(31868873), # samples:1
Anticipated loss of major functional domain due to fusion event.

* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Partner

Gene

GO ID

GO term

PubMed ID

Fusion gene breakpoints across SKIV2L (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

Fusion gene breakpoints across C2 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

Source	Disease	Sample	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
ChimerDB4	COAD	TCGA-A6-2679-01A	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+

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Fusion Gene ORF analysis for SKIV2L-C2

Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

ORF	Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
5CDS-intron	ENST00000375394	ENST00000299367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000375510	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000383359	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000383362	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000383367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000411803	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000413548	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000416252	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000418949	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000419062	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000423826	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000428140	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000442278	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000448206	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000452323	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000452763	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000468407	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000469372	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000475544	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000476210	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000489229	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000491080	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000491097	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000498138	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000547984	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000548250	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000548500	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000548828	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000548973	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000548995	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000549222	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000549972	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000549997	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000550045	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000550129	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000550363	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000550682	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000551081	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000551648	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000375394	ENST00000552638	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000299367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000375510	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000383359	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000383362	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000383367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000411803	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000413548	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000416252	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000418949	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000419062	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000423826	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000428140	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000442278	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000448206	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000452323	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000452763	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000468407	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000469372	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000475544	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000476210	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000489229	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000491080	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000491097	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000498138	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000547984	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000548250	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000548500	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000548828	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000548973	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000548995	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000549222	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000549972	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000549997	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000550045	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000550129	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000550363	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000550682	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000551081	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000551648	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
5CDS-intron	ENST00000544581	ENST00000552638	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000299367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000375510	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000383359	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000383362	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000383367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000411803	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000413548	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000416252	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000418949	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000419062	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000423826	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000428140	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000442278	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000448206	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000452323	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000452763	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000468407	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000469372	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000475544	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000476210	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000489229	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000491080	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000491097	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000498138	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000547984	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000548250	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000548500	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000548828	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000548973	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000548995	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000549222	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000549972	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000549997	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000550045	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000550129	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000550363	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000550682	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000551081	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000551648	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000383336	ENST00000552638	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000299367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000375510	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000383359	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000383362	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000383367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000411803	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000413548	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000416252	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000418949	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000419062	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000423826	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000428140	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000442278	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000448206	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000452323	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000452763	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000468407	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000469372	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000475544	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000476210	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000489229	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000491080	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000491097	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000498138	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000547984	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000548250	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000548500	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000548828	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000548973	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000548995	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000549222	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000549972	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000549997	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000550045	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000550129	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000550363	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000550682	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000551081	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000551648	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000412823	ENST00000552638	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000299367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000375510	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000383359	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000383362	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000383367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000411803	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000413548	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000416252	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000418949	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000419062	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000423826	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000428140	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000442278	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000448206	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000452323	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000452763	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000468407	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000469372	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000475544	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000476210	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000489229	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000491080	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000491097	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000498138	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000547984	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000548250	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000548500	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000548828	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000548973	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000548995	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000549222	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000549972	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000549997	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000550045	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000550129	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000550363	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000550682	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000551081	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000551648	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000421789	ENST00000552638	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000299367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000375510	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000383359	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000383362	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000383367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000411803	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000413548	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000416252	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000418949	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000419062	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000423826	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000428140	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000442278	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000448206	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000452323	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000452763	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000468407	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000469372	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000475544	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000476210	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000489229	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000491080	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000491097	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000498138	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000547984	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000548250	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000548500	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000548828	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000548973	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000548995	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000549222	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000549972	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000549997	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000550045	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000550129	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000550363	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000550682	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000551081	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000551648	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000429465	ENST00000552638	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000299367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000375510	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000383359	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000383362	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000383367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000411803	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000413548	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000416252	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000418949	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000419062	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000423826	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000428140	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000442278	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000448206	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000452323	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000452763	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000468407	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000469372	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000475544	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000476210	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000489229	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000491080	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000491097	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000498138	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000547984	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000548250	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000548500	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000548828	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000548973	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000548995	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000549222	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000549972	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000549997	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000550045	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000550129	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000550363	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000550682	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000551081	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000551648	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000448219	ENST00000552638	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000299367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000375510	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000383359	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000383362	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000383367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000411803	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000413548	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000416252	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000418949	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000419062	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000423826	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000428140	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000442278	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000448206	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000452323	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000452763	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000468407	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000469372	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000475544	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000476210	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000489229	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000491080	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000491097	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000498138	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000547984	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000548250	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000548500	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000548828	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000548973	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000548995	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000549222	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000549972	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000549997	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000550045	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000550129	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000550363	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000550682	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000551081	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000551648	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000461360	ENST00000552638	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000299367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000375510	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000383359	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000383362	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000383367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000411803	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000413548	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000416252	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000418949	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000419062	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000423826	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000428140	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000442278	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000448206	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000452323	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000452763	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000468407	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000469372	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000475544	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000476210	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000489229	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000491080	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000491097	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000498138	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000547984	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000548250	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000548500	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000548828	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000548973	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000548995	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000549222	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000549972	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000549997	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000550045	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000550129	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000550363	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000550682	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000551081	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000551648	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000466463	ENST00000552638	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000299367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000375510	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000383359	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000383362	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000383367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000411803	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000413548	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000416252	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000418949	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000419062	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000423826	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000428140	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000442278	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000448206	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000452323	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000452763	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000468407	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000469372	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000475544	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000476210	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000489229	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000491080	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000491097	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000498138	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000547984	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000548250	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000548500	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000548828	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000548973	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000548995	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000549222	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000549972	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000549997	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000550045	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000550129	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000550363	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000550682	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000551081	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000551648	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000471547	ENST00000552638	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000299367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000375510	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000383359	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000383362	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000383367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000411803	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000413548	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000416252	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000418949	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000419062	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000423826	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000428140	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000442278	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000448206	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000452323	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000452763	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000468407	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000469372	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000475544	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000476210	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000489229	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000491080	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000491097	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000498138	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000547984	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000548250	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000548500	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000548828	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000548973	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000548995	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000549222	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000549972	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000549997	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000550045	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000550129	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000550363	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000550682	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000551081	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000551648	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000476338	ENST00000552638	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000299367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000375510	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000383359	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000383362	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000383367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000411803	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000413548	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000416252	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000418949	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000419062	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000423826	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000428140	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000442278	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000448206	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000452323	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000452763	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000468407	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000469372	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000475544	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000476210	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000489229	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000491080	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000491097	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000498138	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000547984	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000548250	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000548500	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000548828	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000548973	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000548995	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000549222	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000549972	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000549997	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000550045	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000550129	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000550363	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000550682	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000551081	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000551648	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000480914	ENST00000552638	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000299367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000375510	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000383359	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000383362	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000383367	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000411803	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000413548	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000416252	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000418949	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000419062	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000423826	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000428140	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000442278	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000448206	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000452323	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000452763	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000468407	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000469372	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000475544	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000476210	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000489229	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000491080	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000491097	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000498138	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000547984	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000548250	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000548500	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000548828	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000548973	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000548995	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000549222	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000549972	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000549997	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000550045	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000550129	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000550363	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000550682	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000551081	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000551648	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+
intron-intron	ENST00000488648	ENST00000552638	SKIV2L	chr6	31936300	+	C2	chr6	31868873	+

ORFfinder result based on the fusion transcript sequence of in-frame fusion genes.

Henst

Tenst

Hgene

Hchr

Hbp

Hstrand

Tgene

Tchr

Tbp

Tstrand

Seq length
(transcript)

BP loci
(transcript)

Predicted start
(transcript)

Predicted stop
(transcript)

Seq length
(amino acids)

DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.

Henst

Tenst

Hgene

Hchr

Hbp

Hstrand

Tgene

Tchr

Tbp

Tstrand

No-coding score

Coding score

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Fusion Genomic Features for SKIV2L-C2

FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.

Hgene

Hchr

Hbp

Hstrand

Tgene

Tchr

Tbp

Tstrand

1-p

p (fusion gene breakpoint)

Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for SKIV2L-C2

Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/:31936300/:31868873)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.

Main function of each fusion partner protein. (from UniProt)

Hgene	Tgene
.	C2 Q6ZV80
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at
download page

* Minus value of BPloci means that the break pointn is located before the CDS.

- In-frame and retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

- In-frame and not-retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

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Fusion Gene Sequence for SKIV2L-C2

For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.

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Fusion Gene PPI Analysis for SKIV2L-C2

Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in
ChiPPI page.

Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)

Hgene

Hgene's interactors

Tgene

Tgene's interactors

- Retained PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Still interaction with

- Lost PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

- Retained PPIs, but lost function due to frame-shift fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

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Related Drugs for SKIV2L-C2

Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)

Partner

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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Related Diseases for SKIV2L-C2

Diseases associated with fusion partners.
(DisGeNet 4.0)

Partner

Gene

Disease ID

Disease name

# pubmeds

Source