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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Fusion gene:SLC10A6-NUP214 (FusionGDB2 ID:82190)

Fusion Gene Summary for SLC10A6-NUP214

check button Fusion gene summary
Fusion gene informationFusion gene name: SLC10A6-NUP214
Fusion gene ID: 82190
HgeneTgene
Gene symbol

SLC10A6

NUP214

Gene ID

345274

8021

Gene namesolute carrier family 10 member 6nucleoporin 214
SynonymsSOATCAIN|CAN|IIAE9
Cytomap

4q21.3

9q34.13

Type of geneprotein-codingprotein-coding
Descriptionsolute carrier family 10 member 6sodium-dependent organic anion transportersolute carrier family 10 (sodium/bile acid cotransporter family), member 6solute carrier family 10 (sodium/bile acid cotransporter), member 6nuclear pore complex protein Nup214CAN protein, putative oncogenenucleoporin 214kDa
Modification date2020031320200322
UniProtAcc.

P35658

Ensembl transtripts involved in fusion geneENST00000273905, ENST00000505535, 
ENST00000465486, ENST00000359428, 
ENST00000411637, ENST00000451030, 
ENST00000483497, 
Fusion gene scores* DoF score1 X 1 X 1=119 X 26 X 11=5434
# samples 129
** MAII scorelog2(1/1*10)=3.32192809488736log2(29/5434*10)=-4.22788976020704
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: SLC10A6 [Title/Abstract] AND NUP214 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointSLC10A6(87769891)-NUP214(134090598), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across SLC10A6 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across NUP214 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4ESCATCGA-LN-A7HYSLC10A6chr4

87769891

-NUP214chr9

134090598

+


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Fusion Gene ORF analysis for SLC10A6-NUP214

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-intronENST00000273905ENST00000465486SLC10A6chr4

87769891

-NUP214chr9

134090598

+
5UTR-3CDSENST00000505535ENST00000359428SLC10A6chr4

87769891

-NUP214chr9

134090598

+
5UTR-3CDSENST00000505535ENST00000411637SLC10A6chr4

87769891

-NUP214chr9

134090598

+
5UTR-3CDSENST00000505535ENST00000451030SLC10A6chr4

87769891

-NUP214chr9

134090598

+
5UTR-3CDSENST00000505535ENST00000483497SLC10A6chr4

87769891

-NUP214chr9

134090598

+
5UTR-intronENST00000505535ENST00000465486SLC10A6chr4

87769891

-NUP214chr9

134090598

+
In-frameENST00000273905ENST00000359428SLC10A6chr4

87769891

-NUP214chr9

134090598

+
In-frameENST00000273905ENST00000411637SLC10A6chr4

87769891

-NUP214chr9

134090598

+
In-frameENST00000273905ENST00000451030SLC10A6chr4

87769891

-NUP214chr9

134090598

+
In-frameENST00000273905ENST00000483497SLC10A6chr4

87769891

-NUP214chr9

134090598

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000273905SLC10A6chr487769891-ENST00000359428NUP214chr9134090598+23895251481359403
ENST00000273905SLC10A6chr487769891-ENST00000411637NUP214chr9134090598+23825251481359403
ENST00000273905SLC10A6chr487769891-ENST00000451030NUP214chr9134090598+14205251481359403
ENST00000273905SLC10A6chr487769891-ENST00000483497NUP214chr9134090598+14225251481359403

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000273905ENST00000359428SLC10A6chr487769891-NUP214chr9134090598+0.100824940.89917505
ENST00000273905ENST00000411637SLC10A6chr487769891-NUP214chr9134090598+0.100220560.8997795
ENST00000273905ENST00000451030SLC10A6chr487769891-NUP214chr9134090598+0.159798650.8402013
ENST00000273905ENST00000483497SLC10A6chr487769891-NUP214chr9134090598+0.15726640.84273356

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Fusion Genomic Features for SLC10A6-NUP214


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
SLC10A6chr487769891-NUP214chr9134090598+0.0002133390.9997867
SLC10A6chr487769891-NUP214chr9134090598+0.0002133390.9997867

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

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Fusion Protein Features for SLC10A6-NUP214


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr4:87769891/chr9:134090598)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.NUP214

P35658

FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Part of the nuclear pore complex (PubMed:9049309). Has a critical role in nucleocytoplasmic transport (PubMed:31178128). May serve as a docking site in the receptor-mediated import of substrates across the nuclear pore complex (PubMed:31178128, PubMed:8108440). {ECO:0000269|PubMed:31178128, ECO:0000269|PubMed:9049309, ECO:0000303|PubMed:8108440}.; FUNCTION: (Microbial infection) Required for capsid disassembly of the human adenovirus 5 (HadV-5) leading to release of the viral genome to the nucleus (in vitro). {ECO:0000269|PubMed:25410864}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-161_29125378.0Topological domainExtracellular
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-1651_67125378.0Topological domainCytoplasmic
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-1689_97125378.0Topological domainExtracellular
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-1630_50125378.0TransmembraneHelical
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-1668_88125378.0TransmembraneHelical
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-1698_118125378.0TransmembraneHelical
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361862_186318642091.0Repeat24
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361874_187518642091.0Repeat25
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361910_191118642091.0Repeat26
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361922_192318642091.0Repeat27
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361930_193118642091.0Repeat28
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361938_193918642091.0Repeat29
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361959_196018642091.0Repeat30
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361970_197118642091.0Repeat31
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361976_197718642091.0Repeat32
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361982_198318642091.0Repeat33
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361988_198918642091.0Repeat34
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361994_199518642091.0Repeat35
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829362012_201318642091.0Repeat36
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829362024_202518642091.0Repeat37
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829362026_202718642091.0Repeat38
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829362035_203618642091.0Repeat39
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829362046_204718642091.0Repeat40
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829362056_205718642091.0Repeat41
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829362066_206718642091.0Repeat42
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829362075_207618642091.0Repeat43
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829362085_208618642091.0Repeat44
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361851_185218542081.0Repeat23
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361862_186318542081.0Repeat24
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361874_187518542081.0Repeat25
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361910_191118542081.0Repeat26
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361922_192318542081.0Repeat27
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361930_193118542081.0Repeat28
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361938_193918542081.0Repeat29
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361959_196018542081.0Repeat30
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361970_197118542081.0Repeat31
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361976_197718542081.0Repeat32
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361982_198318542081.0Repeat33
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361988_198918542081.0Repeat34
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361994_199518542081.0Repeat35
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729362012_201318542081.0Repeat36
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729362024_202518542081.0Repeat37
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729362026_202718542081.0Repeat38
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729362035_203618542081.0Repeat39
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729362046_204718542081.0Repeat40
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729362056_205718542081.0Repeat41
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729362066_206718542081.0Repeat42
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729362075_207618542081.0Repeat43
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729362085_208618542081.0Repeat44
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361862_186318652092.0Repeat24
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361874_187518652092.0Repeat25
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361910_191118652092.0Repeat26
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361922_192318652092.0Repeat27
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361930_193118652092.0Repeat28
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361938_193918652092.0Repeat29
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361959_196018652092.0Repeat30
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361970_197118652092.0Repeat31
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361976_197718652092.0Repeat32
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361982_198318652092.0Repeat33
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361988_198918652092.0Repeat34
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361994_199518652092.0Repeat35
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029362012_201318652092.0Repeat36
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029362024_202518652092.0Repeat37
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029362026_202718652092.0Repeat38
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029362035_203618652092.0Repeat39
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029362046_204718652092.0Repeat40
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029362056_205718652092.0Repeat41
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029362066_206718652092.0Repeat42
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029362075_207618652092.0Repeat43
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029362085_208618652092.0Repeat44

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-16119_133125378.0Topological domainCytoplasmic
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-16155_159125378.0Topological domainExtracellular
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-16181_195125378.0Topological domainCytoplasmic
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-16217_226125378.0Topological domainExtracellular
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-16248_266125378.0Topological domainCytoplasmic
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-16286_290125378.0Topological domainExtracellular
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-16312_377125378.0Topological domainCytoplasmic
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-16134_154125378.0TransmembraneHelical
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-16160_180125378.0TransmembraneHelical
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-16196_216125378.0TransmembraneHelical
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-16227_247125378.0TransmembraneHelical
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-16267_285125378.0TransmembraneHelical
HgeneSLC10A6chr4:87769891chr9:134090598ENST00000273905-16291_311125378.0TransmembraneHelical
TgeneNUP214chr4:87769891chr9:134090598ENST000003594282936680_120918642091.0Coiled coilOntology_term=ECO:0000269
TgeneNUP214chr4:87769891chr9:134090598ENST000004116372936680_120918542081.0Coiled coilOntology_term=ECO:0000269
TgeneNUP214chr4:87769891chr9:134090598ENST000004510302936680_120918652092.0Coiled coilOntology_term=ECO:0000269
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361213_209018642091.0Compositional biasNote=Pro/Ser/Thr-rich
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361213_209018542081.0Compositional biasNote=Pro/Ser/Thr-rich
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361213_209018652092.0Compositional biasNote=Pro/Ser/Thr-rich
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361409_208418642091.0RegionNote=18 X 4 AA approximate repeats
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361427_208518642091.0RegionNote=11 X 3 AA approximate repeats
TgeneNUP214chr4:87769891chr9:134090598ENST000003594282936236_141818642091.0Region44 X 2 AA repeats of F-G
TgeneNUP214chr4:87769891chr9:134090598ENST00000359428293641_40418642091.0RegionNote=Seven-bladed beta propeller
TgeneNUP214chr4:87769891chr9:134090598ENST000003594282936450_58618642091.0Region(Microbial infection) Binds human adenovirus 5 (HAdV-5) protein L3 (hexon)
TgeneNUP214chr4:87769891chr9:134090598ENST000003594282936481_207618642091.0RegionNote=11 X 5 AA approximate repeats
TgeneNUP214chr4:87769891chr9:134090598ENST000003594282936740_76818642091.0RegionNote=Leucine-zipper 1
TgeneNUP214chr4:87769891chr9:134090598ENST000003594282936861_88218642091.0RegionNote=Leucine-zipper 2
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361409_208418542081.0RegionNote=18 X 4 AA approximate repeats
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361427_208518542081.0RegionNote=11 X 3 AA approximate repeats
TgeneNUP214chr4:87769891chr9:134090598ENST000004116372936236_141818542081.0Region44 X 2 AA repeats of F-G
TgeneNUP214chr4:87769891chr9:134090598ENST00000411637293641_40418542081.0RegionNote=Seven-bladed beta propeller
TgeneNUP214chr4:87769891chr9:134090598ENST000004116372936450_58618542081.0Region(Microbial infection) Binds human adenovirus 5 (HAdV-5) protein L3 (hexon)
TgeneNUP214chr4:87769891chr9:134090598ENST000004116372936481_207618542081.0RegionNote=11 X 5 AA approximate repeats
TgeneNUP214chr4:87769891chr9:134090598ENST000004116372936740_76818542081.0RegionNote=Leucine-zipper 1
TgeneNUP214chr4:87769891chr9:134090598ENST000004116372936861_88218542081.0RegionNote=Leucine-zipper 2
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361409_208418652092.0RegionNote=18 X 4 AA approximate repeats
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361427_208518652092.0RegionNote=11 X 3 AA approximate repeats
TgeneNUP214chr4:87769891chr9:134090598ENST000004510302936236_141818652092.0Region44 X 2 AA repeats of F-G
TgeneNUP214chr4:87769891chr9:134090598ENST00000451030293641_40418652092.0RegionNote=Seven-bladed beta propeller
TgeneNUP214chr4:87769891chr9:134090598ENST000004510302936450_58618652092.0Region(Microbial infection) Binds human adenovirus 5 (HAdV-5) protein L3 (hexon)
TgeneNUP214chr4:87769891chr9:134090598ENST000004510302936481_207618652092.0RegionNote=11 X 5 AA approximate repeats
TgeneNUP214chr4:87769891chr9:134090598ENST000004510302936740_76818652092.0RegionNote=Leucine-zipper 1
TgeneNUP214chr4:87769891chr9:134090598ENST000004510302936861_88218652092.0RegionNote=Leucine-zipper 2
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361225_122618642091.0Repeat3
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361411_141218642091.0Repeat4
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361427_142818642091.0Repeat5
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361441_144218642091.0Repeat6
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361473_147418642091.0Repeat7
TgeneNUP214chr4:87769891chr9:134090598ENST000003594282936151_19318642091.0RepeatNote=Blade 3
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361635_163618642091.0Repeat8
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361674_167518642091.0Repeat9
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361686_168718642091.0Repeat10
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361713_171418642091.0Repeat11
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361721_172218642091.0Repeat12
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361726_172718642091.0Repeat13
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361732_173318642091.0Repeat14
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361756_175718642091.0Repeat15
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361772_177318642091.0Repeat16
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361786_178718642091.0Repeat17
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361798_179918642091.0Repeat18
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361806_180718642091.0Repeat19
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361812_181318642091.0Repeat20
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361819_182018642091.0Repeat21
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361842_184318642091.0Repeat22
TgeneNUP214chr4:87769891chr9:134090598ENST0000035942829361851_185218642091.0Repeat23
TgeneNUP214chr4:87769891chr9:134090598ENST000003594282936194_23918642091.0RepeatNote=Blade 4
TgeneNUP214chr4:87769891chr9:134090598ENST000003594282936240_30318642091.0RepeatNote=Blade 5
TgeneNUP214chr4:87769891chr9:134090598ENST000003594282936304_35918642091.0RepeatNote=Blade 6
TgeneNUP214chr4:87769891chr9:134090598ENST000003594282936360_40418642091.0RepeatNote=Blade 7
TgeneNUP214chr4:87769891chr9:134090598ENST00000359428293641_9318642091.0RepeatNote=Blade 1
TgeneNUP214chr4:87769891chr9:134090598ENST000003594282936484_48518642091.0Repeat1
TgeneNUP214chr4:87769891chr9:134090598ENST000003594282936548_54918642091.0Repeat2
TgeneNUP214chr4:87769891chr9:134090598ENST00000359428293694_15018642091.0RepeatNote=Blade 2
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361225_122618542081.0Repeat3
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361411_141218542081.0Repeat4
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361427_142818542081.0Repeat5
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361441_144218542081.0Repeat6
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361473_147418542081.0Repeat7
TgeneNUP214chr4:87769891chr9:134090598ENST000004116372936151_19318542081.0RepeatNote=Blade 3
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361635_163618542081.0Repeat8
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361674_167518542081.0Repeat9
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361686_168718542081.0Repeat10
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361713_171418542081.0Repeat11
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361721_172218542081.0Repeat12
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361726_172718542081.0Repeat13
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361732_173318542081.0Repeat14
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361756_175718542081.0Repeat15
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361772_177318542081.0Repeat16
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361786_178718542081.0Repeat17
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361798_179918542081.0Repeat18
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361806_180718542081.0Repeat19
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361812_181318542081.0Repeat20
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361819_182018542081.0Repeat21
TgeneNUP214chr4:87769891chr9:134090598ENST0000041163729361842_184318542081.0Repeat22
TgeneNUP214chr4:87769891chr9:134090598ENST000004116372936194_23918542081.0RepeatNote=Blade 4
TgeneNUP214chr4:87769891chr9:134090598ENST000004116372936240_30318542081.0RepeatNote=Blade 5
TgeneNUP214chr4:87769891chr9:134090598ENST000004116372936304_35918542081.0RepeatNote=Blade 6
TgeneNUP214chr4:87769891chr9:134090598ENST000004116372936360_40418542081.0RepeatNote=Blade 7
TgeneNUP214chr4:87769891chr9:134090598ENST00000411637293641_9318542081.0RepeatNote=Blade 1
TgeneNUP214chr4:87769891chr9:134090598ENST000004116372936484_48518542081.0Repeat1
TgeneNUP214chr4:87769891chr9:134090598ENST000004116372936548_54918542081.0Repeat2
TgeneNUP214chr4:87769891chr9:134090598ENST00000411637293694_15018542081.0RepeatNote=Blade 2
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361225_122618652092.0Repeat3
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361411_141218652092.0Repeat4
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361427_142818652092.0Repeat5
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361441_144218652092.0Repeat6
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361473_147418652092.0Repeat7
TgeneNUP214chr4:87769891chr9:134090598ENST000004510302936151_19318652092.0RepeatNote=Blade 3
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361635_163618652092.0Repeat8
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361674_167518652092.0Repeat9
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361686_168718652092.0Repeat10
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361713_171418652092.0Repeat11
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361721_172218652092.0Repeat12
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361726_172718652092.0Repeat13
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361732_173318652092.0Repeat14
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361756_175718652092.0Repeat15
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361772_177318652092.0Repeat16
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361786_178718652092.0Repeat17
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361798_179918652092.0Repeat18
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361806_180718652092.0Repeat19
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361812_181318652092.0Repeat20
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361819_182018652092.0Repeat21
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361842_184318652092.0Repeat22
TgeneNUP214chr4:87769891chr9:134090598ENST0000045103029361851_185218652092.0Repeat23
TgeneNUP214chr4:87769891chr9:134090598ENST000004510302936194_23918652092.0RepeatNote=Blade 4
TgeneNUP214chr4:87769891chr9:134090598ENST000004510302936240_30318652092.0RepeatNote=Blade 5
TgeneNUP214chr4:87769891chr9:134090598ENST000004510302936304_35918652092.0RepeatNote=Blade 6
TgeneNUP214chr4:87769891chr9:134090598ENST000004510302936360_40418652092.0RepeatNote=Blade 7
TgeneNUP214chr4:87769891chr9:134090598ENST00000451030293641_9318652092.0RepeatNote=Blade 1
TgeneNUP214chr4:87769891chr9:134090598ENST000004510302936484_48518652092.0Repeat1
TgeneNUP214chr4:87769891chr9:134090598ENST000004510302936548_54918652092.0Repeat2
TgeneNUP214chr4:87769891chr9:134090598ENST00000451030293694_15018652092.0RepeatNote=Blade 2


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Fusion Gene Sequence for SLC10A6-NUP214


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>82190_82190_1_SLC10A6-NUP214_SLC10A6_chr4_87769891_ENST00000273905_NUP214_chr9_134090598_ENST00000359428_length(transcript)=2389nt_BP=525nt
TTAGGATGAATCACCTTGCTGGCCAACAGTTATTGGAATGATTCTCCATGTGTGACTTCGTTGCACTATTACAAAATGTGGCAGGATAGA
CCTGCCCAGCCATTGTTGCCGATGTTCATTTGTAATGCTGCCTTAAGGAGATGAGGAGATGAGAGCCAATTGTTCCAGCAGCTCAGCCTG
CCCTGCCAACAGTTCAGAGGAGGAGCTGCCAGTGGGACTGGAGGTGCATGGAAACCTGGAGCTCGTTTTCACAGTGGTGTCCACTGTGAT
GATGGGGCTGCTCATGTTCTCTTTGGGATGTTCCGTGGAGATCCGGAAGCTGTGGTCGCACATCAGGAGACCCTGGGGCATTGCTGTGGG
ACTGCTCTGCCAGTTTGGGCTCATGCCTTTTACAGCTTATCTCCTGGCCATTAGCTTTTCTCTGAAGCCAGTCCAAGCTATTGCTGTTCT
CATCATGGGCTGCTGCCCGGGGGGCACCATCTCTAACATTTTCACCTTCTGGGTTGATGGAGATATGGATCTCAGCAATCATCCTCTTCC
AGTGGTAGCGTGTTTGGGTCTGGAAACACTGGAAGAGGGGGAGGTTTCTTCAGTGGCCTTGGAGGAAAACCCAGTCAGGATGCAGCCAAC
AAAAACCCATTCAGCTCGGCCAGTGGGGGCTTTGGATCCACAGCTACCTCAAATACCTCTAACCTATTTGGAAACAGTGGGGCCAAGACA
TTTGGTGGATTTGCCAGCTCGTCGTTTGGAGAGCAGAAACCCACTGGCACTTTCAGCTCTGGAGGAGGAAGTGTGGCATCCCAAGGCTTT
GGGTTTTCCTCTCCAAACAAAACAGGTGGCTTCGGTGCTGCTCCAGTGTTTGGCAGCCCTCCTACTTTTGGGGGATCCCCTGGGTTTGGA
GGGGTGCCAGCATTCGGTTCAGCCCCAGCCTTTACAAGCCCTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGGCACTGCAGCTGCC
AGCGCAGGAGGATTCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGATCACTG
TCCCAACAGACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTCTGGTTTTGGATCAGGCACAGGAGGGTTCAGCTTTGGGTCAAATAAC
TCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAACAGAAACCAAAACTCACA
AGGCGCATGATTACTTGTTTTATATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAACGTATGTGGGTTTT
TTCAGATCACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTCCATCAGCCAGAACACTGTGTCTTCAAGGA
TGGCATCAGAAGTCACCAGCGTCGGGTGTTGATAAACAGCATCGAATGTGCCGTGGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAA
GAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACTTGGTTATCTCCTCTCCTTGTTCTTTTAGCCATTGTGTATCAGGACCATC
CAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGTTGAGTTTCAGAAGCAGCCATAGCGCTTTTCAG
TACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCTCTCATCTCCATGTGGCTCTTGGGTGCCATG
TGTCCTACTCCAGAGAGGAGGGGGCCGGTCACTTGAGAAGACAGCCTTTATATTCTGTATGTGGCAGTGACATTGGTAGCCACACCTACC
CAGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTTGCCAGACAACACTAGCAGA
ACGATGCTGGATTTGACAACAGTGTTTGCTAGGACGGCCCAGAGCTCATCACTGCAGTTTTATTAGAGTGCTTCTTTATCTTTAATGCAG
TATCTTTGAGGCCTGTAACATCCTAGATAGTTGCCATCAAACAAGGACCGTCTCGCATTGAAAACAGATGTAAGAATTTCTCTTTCAGGC
CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGAGATTTTTTTTTTTAGAGTTTTACATATTGGCAGGTT

>82190_82190_1_SLC10A6-NUP214_SLC10A6_chr4_87769891_ENST00000273905_NUP214_chr9_134090598_ENST00000359428_length(amino acids)=403AA_BP=125
MRANCSSSSACPANSSEEELPVGLEVHGNLELVFTVVSTVMMGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLAISF
SLKPVQAIAVLIMGCCPGGTISNIFTFWVDGDMDLSNHPLPVVACLGLETLEEGEVSSVALEENPVRMQPTKTHSARPVGALDPQLPQIP
LTYLETVGPRHLVDLPARRLESRNPLALSALEEEVWHPKALGFPLQTKQVASVLLQCLAALLLLGDPLGLEGCQHSVQPQPLQALWARRE
AKCSERALQLPAQEDSGLGAAATPHPSARSRVRMPPLSDHCPNRLLVLGPRVADSLVLDQAQEGSALGQITRLSRVLVAGEAEGVSAGLS

--------------------------------------------------------------
>82190_82190_2_SLC10A6-NUP214_SLC10A6_chr4_87769891_ENST00000273905_NUP214_chr9_134090598_ENST00000411637_length(transcript)=2382nt_BP=525nt
TTAGGATGAATCACCTTGCTGGCCAACAGTTATTGGAATGATTCTCCATGTGTGACTTCGTTGCACTATTACAAAATGTGGCAGGATAGA
CCTGCCCAGCCATTGTTGCCGATGTTCATTTGTAATGCTGCCTTAAGGAGATGAGGAGATGAGAGCCAATTGTTCCAGCAGCTCAGCCTG
CCCTGCCAACAGTTCAGAGGAGGAGCTGCCAGTGGGACTGGAGGTGCATGGAAACCTGGAGCTCGTTTTCACAGTGGTGTCCACTGTGAT
GATGGGGCTGCTCATGTTCTCTTTGGGATGTTCCGTGGAGATCCGGAAGCTGTGGTCGCACATCAGGAGACCCTGGGGCATTGCTGTGGG
ACTGCTCTGCCAGTTTGGGCTCATGCCTTTTACAGCTTATCTCCTGGCCATTAGCTTTTCTCTGAAGCCAGTCCAAGCTATTGCTGTTCT
CATCATGGGCTGCTGCCCGGGGGGCACCATCTCTAACATTTTCACCTTCTGGGTTGATGGAGATATGGATCTCAGCAATCATCCTCTTCC
AGTGGTAGCGTGTTTGGGTCTGGAAACACTGGAAGAGGGGGAGGTTTCTTCAGTGGCCTTGGAGGAAAACCCAGTCAGGATGCAGCCAAC
AAAAACCCATTCAGCTCGGCCAGTGGGGGCTTTGGATCCACAGCTACCTCAAATACCTCTAACCTATTTGGAAACAGTGGGGCCAAGACA
TTTGGTGGATTTGCCAGCTCGTCGTTTGGAGAGCAGAAACCCACTGGCACTTTCAGCTCTGGAGGAGGAAGTGTGGCATCCCAAGGCTTT
GGGTTTTCCTCTCCAAACAAAACAGGTGGCTTCGGTGCTGCTCCAGTGTTTGGCAGCCCTCCTACTTTTGGGGGATCCCCTGGGTTTGGA
GGGGTGCCAGCATTCGGTTCAGCCCCAGCCTTTACAAGCCCTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGGCACTGCAGCTGCC
AGCGCAGGAGGATTCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGATCACTG
TCCCAACAGACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTCTGGTTTTGGATCAGGCACAGGAGGGTTCAGCTTTGGGTCAAATAAC
TCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAACAGAAACCAAAACTCACA
AGGCGCATGATTACTTGTTTTATATTTCATGTTGGGTTTTCCCTCCCACTATTAAACAGTCTGTTTCCGTACAGAACGTATGTGGGTTTT
TTCAGATCACAGCCAAGAAGATTGCCCCGTTTCTGTGGCTCTGAGAAGCCAGCAGAGCCTCCATCAGCCAGAACACTGTGTCTTCAAGGA
TGGCATCAGAAGTCACCAGCGTCGGGTGTTGATAAACAGCATCGAATGTGCCGTGGTCTCACTTGGACCTAGCGCCCTCCACATAGGGAA
GAGGTTGAATGCTGGTGGGTCATCTTTTTGAGGCTGAAACTTGGTTATCTCCTCTCCTTGTTCTTTTAGCCATTGTGTATCAGGACCATC
CAAGGACGCACTCTGCGATTGAGTGGAGGCAGAGGAAGCCACTCATGCCAGCAGCAGTTGAGTTTCAGAAGCAGCCATAGCGCTTTTCAG
TACAGTACAATAGTAGCCAGCGTGAGGCAGGACAGTGCTGCGCCTTAGCCGGCCTTGGCTCTCATCTCCATGTGGCTCTTGGGTGCCATG
TGTCCTACTCCAGAGAGGAGGGGGCCGGTCACTTGAGAAGACAGCCTTTATATTCTGTATGTGGCAGTGACATTGGTAGCCACACCTACC
CAGTGTCTACTAACCACAGTGCAGATAGCCCTTGGGTAGACCCAGGAAGTGTGAAGACAGACACTGCTGTTGCCAGACAACACTAGCAGA
ACGATGCTGGATTTGACAACAGTGTTTGCTAGGACGGCCCAGAGCTCATCACTGCAGTTTTATTAGAGTGCTTCTTTATCTTTAATGCAG
TATCTTTGAGGCCTGTAACATCCTAGATAGTTGCCATCAAACAAGGACCGTCTCGCATTGAAAACAGATGTAAGAATTTCTCTTTCAGGC
CCAGAATCTGACAGTGCTTTGGCTTGGGTCATGAGCAGCGGGGAGTTGGGAAGAGATTTTTTTTTTTAGAGTTTTACATATTGGCAGGTT

>82190_82190_2_SLC10A6-NUP214_SLC10A6_chr4_87769891_ENST00000273905_NUP214_chr9_134090598_ENST00000411637_length(amino acids)=403AA_BP=125
MRANCSSSSACPANSSEEELPVGLEVHGNLELVFTVVSTVMMGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLAISF
SLKPVQAIAVLIMGCCPGGTISNIFTFWVDGDMDLSNHPLPVVACLGLETLEEGEVSSVALEENPVRMQPTKTHSARPVGALDPQLPQIP
LTYLETVGPRHLVDLPARRLESRNPLALSALEEEVWHPKALGFPLQTKQVASVLLQCLAALLLLGDPLGLEGCQHSVQPQPLQALWARRE
AKCSERALQLPAQEDSGLGAAATPHPSARSRVRMPPLSDHCPNRLLVLGPRVADSLVLDQAQEGSALGQITRLSRVLVAGEAEGVSAGLS

--------------------------------------------------------------
>82190_82190_3_SLC10A6-NUP214_SLC10A6_chr4_87769891_ENST00000273905_NUP214_chr9_134090598_ENST00000451030_length(transcript)=1420nt_BP=525nt
TTAGGATGAATCACCTTGCTGGCCAACAGTTATTGGAATGATTCTCCATGTGTGACTTCGTTGCACTATTACAAAATGTGGCAGGATAGA
CCTGCCCAGCCATTGTTGCCGATGTTCATTTGTAATGCTGCCTTAAGGAGATGAGGAGATGAGAGCCAATTGTTCCAGCAGCTCAGCCTG
CCCTGCCAACAGTTCAGAGGAGGAGCTGCCAGTGGGACTGGAGGTGCATGGAAACCTGGAGCTCGTTTTCACAGTGGTGTCCACTGTGAT
GATGGGGCTGCTCATGTTCTCTTTGGGATGTTCCGTGGAGATCCGGAAGCTGTGGTCGCACATCAGGAGACCCTGGGGCATTGCTGTGGG
ACTGCTCTGCCAGTTTGGGCTCATGCCTTTTACAGCTTATCTCCTGGCCATTAGCTTTTCTCTGAAGCCAGTCCAAGCTATTGCTGTTCT
CATCATGGGCTGCTGCCCGGGGGGCACCATCTCTAACATTTTCACCTTCTGGGTTGATGGAGATATGGATCTCAGCAATCATCCTCTTCC
AGTGGTAGCGTGTTTGGGTCTGGAAACACTGGAAGAGGGGGAGGTTTCTTCAGTGGCCTTGGAGGAAAACCCAGTCAGGATGCAGCCAAC
AAAAACCCATTCAGCTCGGCCAGTGGGGGCTTTGGATCCACAGCTACCTCAAATACCTCTAACCTATTTGGAAACAGTGGGGCCAAGACA
TTTGGTGGATTTGCCAGCTCGTCGTTTGGAGAGCAGAAACCCACTGGCACTTTCAGCTCTGGAGGAGGAAGTGTGGCATCCCAAGGCTTT
GGGTTTTCCTCTCCAAACAAAACAGGTGGCTTCGGTGCTGCTCCAGTGTTTGGCAGCCCTCCTACTTTTGGGGGATCCCCTGGGTTTGGA
GGGGTGCCAGCATTCGGTTCAGCCCCAGCCTTTACAAGCCCTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGGCACTGCAGCTGCC
AGCGCAGGAGGATTCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGATCACTG
TCCCAACAGACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTCTGGTTTTGGATCAGGCACAGGAGGGTTCAGCTTTGGGTCAAATAAC
TCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAACAGAAACCAAAACTCACA

>82190_82190_3_SLC10A6-NUP214_SLC10A6_chr4_87769891_ENST00000273905_NUP214_chr9_134090598_ENST00000451030_length(amino acids)=403AA_BP=125
MRANCSSSSACPANSSEEELPVGLEVHGNLELVFTVVSTVMMGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLAISF
SLKPVQAIAVLIMGCCPGGTISNIFTFWVDGDMDLSNHPLPVVACLGLETLEEGEVSSVALEENPVRMQPTKTHSARPVGALDPQLPQIP
LTYLETVGPRHLVDLPARRLESRNPLALSALEEEVWHPKALGFPLQTKQVASVLLQCLAALLLLGDPLGLEGCQHSVQPQPLQALWARRE
AKCSERALQLPAQEDSGLGAAATPHPSARSRVRMPPLSDHCPNRLLVLGPRVADSLVLDQAQEGSALGQITRLSRVLVAGEAEGVSAGLS

--------------------------------------------------------------
>82190_82190_4_SLC10A6-NUP214_SLC10A6_chr4_87769891_ENST00000273905_NUP214_chr9_134090598_ENST00000483497_length(transcript)=1422nt_BP=525nt
TTAGGATGAATCACCTTGCTGGCCAACAGTTATTGGAATGATTCTCCATGTGTGACTTCGTTGCACTATTACAAAATGTGGCAGGATAGA
CCTGCCCAGCCATTGTTGCCGATGTTCATTTGTAATGCTGCCTTAAGGAGATGAGGAGATGAGAGCCAATTGTTCCAGCAGCTCAGCCTG
CCCTGCCAACAGTTCAGAGGAGGAGCTGCCAGTGGGACTGGAGGTGCATGGAAACCTGGAGCTCGTTTTCACAGTGGTGTCCACTGTGAT
GATGGGGCTGCTCATGTTCTCTTTGGGATGTTCCGTGGAGATCCGGAAGCTGTGGTCGCACATCAGGAGACCCTGGGGCATTGCTGTGGG
ACTGCTCTGCCAGTTTGGGCTCATGCCTTTTACAGCTTATCTCCTGGCCATTAGCTTTTCTCTGAAGCCAGTCCAAGCTATTGCTGTTCT
CATCATGGGCTGCTGCCCGGGGGGCACCATCTCTAACATTTTCACCTTCTGGGTTGATGGAGATATGGATCTCAGCAATCATCCTCTTCC
AGTGGTAGCGTGTTTGGGTCTGGAAACACTGGAAGAGGGGGAGGTTTCTTCAGTGGCCTTGGAGGAAAACCCAGTCAGGATGCAGCCAAC
AAAAACCCATTCAGCTCGGCCAGTGGGGGCTTTGGATCCACAGCTACCTCAAATACCTCTAACCTATTTGGAAACAGTGGGGCCAAGACA
TTTGGTGGATTTGCCAGCTCGTCGTTTGGAGAGCAGAAACCCACTGGCACTTTCAGCTCTGGAGGAGGAAGTGTGGCATCCCAAGGCTTT
GGGTTTTCCTCTCCAAACAAAACAGGTGGCTTCGGTGCTGCTCCAGTGTTTGGCAGCCCTCCTACTTTTGGGGGATCCCCTGGGTTTGGA
GGGGTGCCAGCATTCGGTTCAGCCCCAGCCTTTACAAGCCCTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGGCACTGCAGCTGCC
AGCGCAGGAGGATTCGGGTTTGGGAGCAGCAGCAACACCACATCCTTCGGCACGCTCGCGAGTCAGAATGCCCCCACTTTCGGATCACTG
TCCCAACAGACTTCTGGTTTTGGGACCCAGAGTAGCGGATTCTCTGGTTTTGGATCAGGCACAGGAGGGTTCAGCTTTGGGTCAAATAAC
TCGTCTGTCCAGGGTTTTGGTGGCTGGCGAAGCTGAGGGCGTGTCAGCAGGCCTTTCGATCCCTGGGACCAACCGCATCCTCAGCTTCTT
CCCCGAGAAATGCTGGAGCAGGCTGTTCAGACCGACGTTGCCATCAAAACACATACACCCAGAAAGAAACAACAGAAACCAAAACTCACA

>82190_82190_4_SLC10A6-NUP214_SLC10A6_chr4_87769891_ENST00000273905_NUP214_chr9_134090598_ENST00000483497_length(amino acids)=403AA_BP=125
MRANCSSSSACPANSSEEELPVGLEVHGNLELVFTVVSTVMMGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLAISF
SLKPVQAIAVLIMGCCPGGTISNIFTFWVDGDMDLSNHPLPVVACLGLETLEEGEVSSVALEENPVRMQPTKTHSARPVGALDPQLPQIP
LTYLETVGPRHLVDLPARRLESRNPLALSALEEEVWHPKALGFPLQTKQVASVLLQCLAALLLLGDPLGLEGCQHSVQPQPLQALWARRE
AKCSERALQLPAQEDSGLGAAATPHPSARSRVRMPPLSDHCPNRLLVLGPRVADSLVLDQAQEGSALGQITRLSRVLVAGEAEGVSAGLS

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Fusion Gene PPI Analysis for SLC10A6-NUP214


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for SLC10A6-NUP214


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for SLC10A6-NUP214


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource