|
Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:SLC25A12-ITGA6 (FusionGDB2 ID:82541) |
Fusion Gene Summary for SLC25A12-ITGA6 |
Fusion gene summary |
Fusion gene information | Fusion gene name: SLC25A12-ITGA6 | Fusion gene ID: 82541 | Hgene | Tgene | Gene symbol | SLC25A12 | ITGA6 | Gene ID | 8604 | 3655 |
Gene name | solute carrier family 25 member 12 | integrin subunit alpha 6 | |
Synonyms | AGC1|ARALAR|EIEE39 | CD49f|ITGA6B|VLA-6 | |
Cytomap | 2q31.1 | 2q31.1 | |
Type of gene | protein-coding | protein-coding | |
Description | calcium-binding mitochondrial carrier protein Aralar1araceli hiperlargacalcium binding mitochondrial carrier superfamily member Aralar1mitochondrial aspartate glutamate carrier 1solute carrier family 25 (aspartate/glutamate carrier), member 12solute | integrin alpha-6CD49 antigen-like family member Fintegrin alpha6Bintegrin, alpha 6 | |
Modification date | 20200313 | 20200329 | |
UniProtAcc | . | P23229 | |
Ensembl transtripts involved in fusion gene | ENST00000392592, ENST00000472748, ENST00000422440, | ENST00000264106, ENST00000264107, ENST00000343713, ENST00000375221, ENST00000409080, ENST00000409532, | |
Fusion gene scores | * DoF score | 11 X 10 X 6=660 | 3 X 3 X 2=18 |
# samples | 12 | 3 | |
** MAII score | log2(12/660*10)=-2.4594316186373 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: SLC25A12 [Title/Abstract] AND ITGA6 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | SLC25A12(172749714)-ITGA6(173333852), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | SLC25A12 | GO:0015810 | aspartate transmembrane transport | 11566871 |
Hgene | SLC25A12 | GO:0015813 | L-glutamate transmembrane transport | 11566871 |
Hgene | SLC25A12 | GO:0043490 | malate-aspartate shuttle | 11566871 |
Hgene | SLC25A12 | GO:0051592 | response to calcium ion | 11566871 |
Fusion gene breakpoints across SLC25A12 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across ITGA6 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | Non-Cancer | 271N | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
Top |
Fusion Gene ORF analysis for SLC25A12-ITGA6 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5UTR-3CDS | ENST00000392592 | ENST00000264106 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
5UTR-3CDS | ENST00000392592 | ENST00000264107 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
5UTR-3CDS | ENST00000392592 | ENST00000343713 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
5UTR-3CDS | ENST00000392592 | ENST00000375221 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
5UTR-3CDS | ENST00000392592 | ENST00000409080 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
5UTR-3CDS | ENST00000392592 | ENST00000409532 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
5UTR-3CDS | ENST00000472748 | ENST00000264106 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
5UTR-3CDS | ENST00000472748 | ENST00000264107 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
5UTR-3CDS | ENST00000472748 | ENST00000343713 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
5UTR-3CDS | ENST00000472748 | ENST00000375221 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
5UTR-3CDS | ENST00000472748 | ENST00000409080 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
5UTR-3CDS | ENST00000472748 | ENST00000409532 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
In-frame | ENST00000422440 | ENST00000264106 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
In-frame | ENST00000422440 | ENST00000264107 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
In-frame | ENST00000422440 | ENST00000343713 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
In-frame | ENST00000422440 | ENST00000375221 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
In-frame | ENST00000422440 | ENST00000409080 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
In-frame | ENST00000422440 | ENST00000409532 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000422440 | SLC25A12 | chr2 | 172749714 | - | ENST00000409532 | ITGA6 | chr2 | 173333852 | + | 3390 | 104 | 38 | 2923 | 961 |
ENST00000422440 | SLC25A12 | chr2 | 172749714 | - | ENST00000264107 | ITGA6 | chr2 | 173333852 | + | 5101 | 104 | 38 | 2938 | 966 |
ENST00000422440 | SLC25A12 | chr2 | 172749714 | - | ENST00000343713 | ITGA6 | chr2 | 173333852 | + | 5309 | 104 | 38 | 2923 | 961 |
ENST00000422440 | SLC25A12 | chr2 | 172749714 | - | ENST00000264106 | ITGA6 | chr2 | 173333852 | + | 5311 | 104 | 38 | 3109 | 1023 |
ENST00000422440 | SLC25A12 | chr2 | 172749714 | - | ENST00000375221 | ITGA6 | chr2 | 173333852 | + | 5441 | 104 | 38 | 3055 | 1005 |
ENST00000422440 | SLC25A12 | chr2 | 172749714 | - | ENST00000409080 | ITGA6 | chr2 | 173333852 | + | 5015 | 104 | 38 | 2992 | 984 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000422440 | ENST00000409532 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + | 8.55E-05 | 0.9999144 |
ENST00000422440 | ENST00000264107 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + | 5.95E-05 | 0.9999405 |
ENST00000422440 | ENST00000343713 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + | 3.52E-05 | 0.9999647 |
ENST00000422440 | ENST00000264106 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + | 0.000112492 | 0.99988747 |
ENST00000422440 | ENST00000375221 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + | 3.67E-05 | 0.9999633 |
ENST00000422440 | ENST00000409080 | SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + | 5.97E-05 | 0.9999403 |
Top |
Fusion Genomic Features for SLC25A12-ITGA6 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + | 0.002073689 | 0.99792624 |
SLC25A12 | chr2 | 172749714 | - | ITGA6 | chr2 | 173333852 | + | 0.002073689 | 0.99792624 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for SLC25A12-ITGA6 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr2:172749714/chr2:173333852) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | ITGA6 |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Integrin alpha-6/beta-1 (ITGA6:ITGB1) is a receptor for laminin on platelets (By similarity). Integrin alpha-6/beta-1 (ITGA6:ITGB1) is present in oocytes and is involved in sperm-egg fusion (By similarity). Integrin alpha-6/beta-4 (ITGA6:ITGB4) is a receptor for laminin in epithelial cells and it plays a critical structural role in the hemidesmosome (By similarity). ITGA6:ITGB4 binds to NRG1 (via EGF domain) and this binding is essential for NRG1-ERBB signaling (PubMed:20682778). ITGA6:ITGB4 binds to IGF1 and this binding is essential for IGF1 signaling (PubMed:22351760). ITGA6:ITGB4 binds to IGF2 and this binding is essential for IGF2 signaling (PubMed:28873464). {ECO:0000250|UniProtKB:Q61739, ECO:0000269|PubMed:20682778, ECO:0000269|PubMed:22351760, ECO:0000269|PubMed:28873464}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264106 | 2 | 26 | 363_371 | 129 | 1131.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264106 | 2 | 26 | 425_433 | 129 | 1131.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264106 | 2 | 26 | 480_488 | 129 | 1131.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264107 | 2 | 26 | 363_371 | 129 | 1648.6666666666667 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264107 | 2 | 26 | 425_433 | 129 | 1648.6666666666667 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264107 | 2 | 26 | 480_488 | 129 | 1648.6666666666667 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000343713 | 2 | 26 | 363_371 | 129 | 1728.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000343713 | 2 | 26 | 425_433 | 129 | 1728.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000343713 | 2 | 26 | 480_488 | 129 | 1728.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000375221 | 2 | 27 | 363_371 | 129 | 1772.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000375221 | 2 | 27 | 425_433 | 129 | 1772.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000375221 | 2 | 27 | 480_488 | 129 | 1772.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409080 | 2 | 25 | 363_371 | 129 | 1092.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409080 | 2 | 25 | 425_433 | 129 | 1092.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409080 | 2 | 25 | 480_488 | 129 | 1092.0 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409532 | 2 | 26 | 363_371 | 15 | 1085.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409532 | 2 | 26 | 425_433 | 15 | 1085.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409532 | 2 | 26 | 480_488 | 15 | 1085.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264106 | 2 | 26 | 1079_1083 | 129 | 1131.0 | Motif | Note=GFFKR motif | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264107 | 2 | 26 | 1079_1083 | 129 | 1648.6666666666667 | Motif | Note=GFFKR motif | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000343713 | 2 | 26 | 1079_1083 | 129 | 1728.3333333333333 | Motif | Note=GFFKR motif | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000375221 | 2 | 27 | 1079_1083 | 129 | 1772.3333333333333 | Motif | Note=GFFKR motif | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409080 | 2 | 25 | 1079_1083 | 129 | 1092.0 | Motif | Note=GFFKR motif | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409532 | 2 | 26 | 1079_1083 | 15 | 1085.3333333333333 | Motif | Note=GFFKR motif | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264106 | 2 | 26 | 176_229 | 129 | 1131.0 | Repeat | FG-GAP 3 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264106 | 2 | 26 | 283_339 | 129 | 1131.0 | Repeat | FG-GAP 4 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264106 | 2 | 26 | 340_402 | 129 | 1131.0 | Repeat | FG-GAP 5 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264106 | 2 | 26 | 403_458 | 129 | 1131.0 | Repeat | FG-GAP 6 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264106 | 2 | 26 | 459_518 | 129 | 1131.0 | Repeat | FG-GAP 7 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264107 | 2 | 26 | 176_229 | 129 | 1648.6666666666667 | Repeat | FG-GAP 3 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264107 | 2 | 26 | 283_339 | 129 | 1648.6666666666667 | Repeat | FG-GAP 4 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264107 | 2 | 26 | 340_402 | 129 | 1648.6666666666667 | Repeat | FG-GAP 5 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264107 | 2 | 26 | 403_458 | 129 | 1648.6666666666667 | Repeat | FG-GAP 6 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264107 | 2 | 26 | 459_518 | 129 | 1648.6666666666667 | Repeat | FG-GAP 7 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000343713 | 2 | 26 | 176_229 | 129 | 1728.3333333333333 | Repeat | FG-GAP 3 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000343713 | 2 | 26 | 283_339 | 129 | 1728.3333333333333 | Repeat | FG-GAP 4 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000343713 | 2 | 26 | 340_402 | 129 | 1728.3333333333333 | Repeat | FG-GAP 5 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000343713 | 2 | 26 | 403_458 | 129 | 1728.3333333333333 | Repeat | FG-GAP 6 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000343713 | 2 | 26 | 459_518 | 129 | 1728.3333333333333 | Repeat | FG-GAP 7 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000375221 | 2 | 27 | 176_229 | 129 | 1772.3333333333333 | Repeat | FG-GAP 3 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000375221 | 2 | 27 | 283_339 | 129 | 1772.3333333333333 | Repeat | FG-GAP 4 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000375221 | 2 | 27 | 340_402 | 129 | 1772.3333333333333 | Repeat | FG-GAP 5 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000375221 | 2 | 27 | 403_458 | 129 | 1772.3333333333333 | Repeat | FG-GAP 6 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000375221 | 2 | 27 | 459_518 | 129 | 1772.3333333333333 | Repeat | FG-GAP 7 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409080 | 2 | 25 | 176_229 | 129 | 1092.0 | Repeat | FG-GAP 3 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409080 | 2 | 25 | 283_339 | 129 | 1092.0 | Repeat | FG-GAP 4 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409080 | 2 | 25 | 340_402 | 129 | 1092.0 | Repeat | FG-GAP 5 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409080 | 2 | 25 | 403_458 | 129 | 1092.0 | Repeat | FG-GAP 6 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409080 | 2 | 25 | 459_518 | 129 | 1092.0 | Repeat | FG-GAP 7 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409532 | 2 | 26 | 101_166 | 15 | 1085.3333333333333 | Repeat | FG-GAP 2 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409532 | 2 | 26 | 176_229 | 15 | 1085.3333333333333 | Repeat | FG-GAP 3 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409532 | 2 | 26 | 283_339 | 15 | 1085.3333333333333 | Repeat | FG-GAP 4 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409532 | 2 | 26 | 30_95 | 15 | 1085.3333333333333 | Repeat | FG-GAP 1 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409532 | 2 | 26 | 340_402 | 15 | 1085.3333333333333 | Repeat | FG-GAP 5 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409532 | 2 | 26 | 403_458 | 15 | 1085.3333333333333 | Repeat | FG-GAP 6 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409532 | 2 | 26 | 459_518 | 15 | 1085.3333333333333 | Repeat | FG-GAP 7 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264106 | 2 | 26 | 1077_1130 | 129 | 1131.0 | Topological domain | Cytoplasmic | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264107 | 2 | 26 | 1077_1130 | 129 | 1648.6666666666667 | Topological domain | Cytoplasmic | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000343713 | 2 | 26 | 1077_1130 | 129 | 1728.3333333333333 | Topological domain | Cytoplasmic | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000375221 | 2 | 27 | 1077_1130 | 129 | 1772.3333333333333 | Topological domain | Cytoplasmic | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409080 | 2 | 25 | 1077_1130 | 129 | 1092.0 | Topological domain | Cytoplasmic | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409532 | 2 | 26 | 1077_1130 | 15 | 1085.3333333333333 | Topological domain | Cytoplasmic | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409532 | 2 | 26 | 24_1050 | 15 | 1085.3333333333333 | Topological domain | Extracellular | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264106 | 2 | 26 | 1051_1076 | 129 | 1131.0 | Transmembrane | Helical | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264107 | 2 | 26 | 1051_1076 | 129 | 1648.6666666666667 | Transmembrane | Helical | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000343713 | 2 | 26 | 1051_1076 | 129 | 1728.3333333333333 | Transmembrane | Helical | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000375221 | 2 | 27 | 1051_1076 | 129 | 1772.3333333333333 | Transmembrane | Helical | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409080 | 2 | 25 | 1051_1076 | 129 | 1092.0 | Transmembrane | Helical | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409532 | 2 | 26 | 1051_1076 | 15 | 1085.3333333333333 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 170_181 | 22 | 679.0 | Calcium binding | 3 |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 65_76 | 22 | 679.0 | Calcium binding | 1 |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 99_110 | 22 | 679.0 | Calcium binding | Note=2 |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 125_155 | 22 | 679.0 | Domain | EF-hand 3 |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 157_192 | 22 | 679.0 | Domain | EF-hand 4 |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 86_121 | 22 | 679.0 | Domain | EF-hand 2 |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 295_310 | 22 | 679.0 | Region | Linker loop domain |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 2_294 | 22 | 679.0 | Region | N-terminal domain |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 320_612 | 22 | 679.0 | Region | Carrier domain |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 613_675 | 22 | 679.0 | Region | C-terminal domain |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 324_416 | 22 | 679.0 | Repeat | Solcar 1 |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 424_508 | 22 | 679.0 | Repeat | Solcar 2 |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 516_604 | 22 | 679.0 | Repeat | Solcar 3 |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 330_347 | 22 | 679.0 | Transmembrane | Helical%3B Name%3D1 |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 391_410 | 22 | 679.0 | Transmembrane | Helical%3B Name%3D2 |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 434_447 | 22 | 679.0 | Transmembrane | Helical%3B Name%3D3 |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 483_502 | 22 | 679.0 | Transmembrane | Helical%3B Name%3D4 |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 522_539 | 22 | 679.0 | Transmembrane | Helical%3B Name%3D5 |
Hgene | SLC25A12 | chr2:172749714 | chr2:173333852 | ENST00000422440 | - | 2 | 18 | 579_598 | 22 | 679.0 | Transmembrane | Helical%3B Name%3D6 |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264106 | 2 | 26 | 101_166 | 129 | 1131.0 | Repeat | FG-GAP 2 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264106 | 2 | 26 | 30_95 | 129 | 1131.0 | Repeat | FG-GAP 1 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264107 | 2 | 26 | 101_166 | 129 | 1648.6666666666667 | Repeat | FG-GAP 2 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264107 | 2 | 26 | 30_95 | 129 | 1648.6666666666667 | Repeat | FG-GAP 1 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000343713 | 2 | 26 | 101_166 | 129 | 1728.3333333333333 | Repeat | FG-GAP 2 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000343713 | 2 | 26 | 30_95 | 129 | 1728.3333333333333 | Repeat | FG-GAP 1 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000375221 | 2 | 27 | 101_166 | 129 | 1772.3333333333333 | Repeat | FG-GAP 2 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000375221 | 2 | 27 | 30_95 | 129 | 1772.3333333333333 | Repeat | FG-GAP 1 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409080 | 2 | 25 | 101_166 | 129 | 1092.0 | Repeat | FG-GAP 2 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409080 | 2 | 25 | 30_95 | 129 | 1092.0 | Repeat | FG-GAP 1 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264106 | 2 | 26 | 24_1050 | 129 | 1131.0 | Topological domain | Extracellular | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264107 | 2 | 26 | 24_1050 | 129 | 1648.6666666666667 | Topological domain | Extracellular | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000343713 | 2 | 26 | 24_1050 | 129 | 1728.3333333333333 | Topological domain | Extracellular | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000375221 | 2 | 27 | 24_1050 | 129 | 1772.3333333333333 | Topological domain | Extracellular | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409080 | 2 | 25 | 24_1050 | 129 | 1092.0 | Topological domain | Extracellular |
Top |
Fusion Gene Sequence for SLC25A12-ITGA6 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>82541_82541_1_SLC25A12-ITGA6_SLC25A12_chr2_172749714_ENST00000422440_ITGA6_chr2_173333852_ENST00000264106_length(transcript)=5311nt_BP=104nt GCTCGCTCACTCGCTCGTCCCCGGCTTCCGAGCACAGCATGGCGGTCAAGGTGCAGACAACTAAGCGAGGGGATCCTCATGAGTTAAGAA ACATATTTCTACAGACATGTGCTCACCGATATGAAAAAAGGCAGCATGTTAATACGAAGCAGGAATCCCGAGACATCTTTGGGCGGTGTT ATGTCCTGAGTCAGAATCTCAGGATTGAAGACGATATGGATGGGGGAGATTGGAGCTTTTGTGATGGGCGATTGAGAGGCCATGAGAAAT TTGGCTCTTGCCAGCAAGGTGTAGCAGCTACTTTTACTAAAGACTTTCATTACATTGTATTTGGAGCCCCGGGTACTTATAACTGGAAAG GGATTGTTCGTGTAGAGCAAAAGAATAACACTTTTTTTGACATGAACATCTTTGAAGATGGGCCTTATGAAGTTGGTGGAGAGACTGAGC ATGATGAAAGTCTCGTTCCTGTTCCTGCTAACAGTTACTTAGGCCTGCTGTTTTTGACCAGCGTTTCCTATACAGATCCTGATCAGTTTG TTTATAAAACACGGCCTCCCCGGGAGCAGCCTGACACATTCCCTGATGTGATGATGAATAGCTACCTAGGTTTTTCTTTGGACTCAGGGA AAGGTATTGTTTCTAAAGATGAGATCACTTTTGTATCTGGTGCTCCCAGAGCCAATCACAGTGGAGCCGTGGTTTTGCTGAAGAGAGACA TGAAGTCTGCACATCTCCTCCCTGAGCACATATTCGATGGAGAAGGTCTGGCCTCTTCATTTGGCTATGATGTGGCGGTGGTGGACCTCA ACAAGGATGGGTGGCAAGATATAGTTATTGGAGCCCCACAGTATTTTGATAGAGATGGAGAAGTTGGAGGTGCAGTGTATGTCTACATGA ACCAGCAAGGCAGATGGAATAATGTGAAGCCAATTCGTCTTAATGGAACCAAAGATTCTATGTTTGGCATTGCAGTAAAAAATATTGGAG ATATTAATCAAGATGGCTACCCAGATATTGCAGTTGGAGCTCCGTATGATGACTTGGGAAAGGTTTTTATCTATCATGGATCTGCAAATG GAATAAATACCAAACCAACACAGGTTCTCAAGGGTATATCACCTTATTTTGGATATTCAATTGCTGGAAACATGGACCTTGATCGAAATT CCTACCCTGATGTTGCTGTTGGTTCCCTCTCAGATTCAGTAACTATTTTCAGATCCCGGCCTGTGATTAATATTCAGAAAACCATCACAG TAACTCCTAACAGAATTGACCTCCGCCAGAAAACAGCGTGTGGGGCGCCTAGTGGGATATGCCTCCAGGTTAAATCCTGTTTTGAATATA CTGCTAACCCCGCTGGTTATAATCCTTCAATATCAATTGTGGGCACACTTGAAGCTGAAAAAGAAAGAAGAAAATCTGGGCTATCCTCAA GAGTTCAGTTTCGAAACCAAGGTTCTGAGCCCAAATATACTCAAGAACTAACTCTGAAGAGGCAGAAACAGAAAGTGTGCATGGAGGAAA CCCTGTGGCTACAGGATAATATCAGAGATAAACTGCGTCCCATTCCCATAACTGCCTCAGTGGAGATCCAAGAGCCAAGCTCTCGTAGGC GAGTGAATTCACTTCCAGAAGTTCTTCCAATTCTGAATTCAGATGAACCCAAGACAGCTCATATTGATGTTCACTTCTTAAAAGAGGGAT GTGGAGACGACAATGTATGTAACAGCAACCTTAAACTAGAATATAAATTTTGCACCCGAGAAGGAAATCAAGACAAATTTTCTTATTTAC CAATTCAAAAAGGTGTACCAGAACTAGTTCTAAAAGATCAGAAGGATATTGCTTTAGAAATAACAGTGACAAACAGCCCTTCCAACCCAA GGAATCCCACAAAAGATGGCGATGACGCCCATGAGGCTAAACTGATTGCAACGTTTCCAGACACTTTAACCTATTCTGCATATAGAGAAC TGAGGGCTTTCCCTGAGAAACAGTTGAGTTGTGTTGCCAACCAGAATGGCTCGCAAGCTGACTGTGAGCTCGGAAATCCTTTTAAAAGAA ATTCAAATGTCACTTTTTATTTGGTTTTAAGTACAACTGAAGTCACCTTTGACACCCCAGATCTGGATATTAATCTGAAGTTAGAAACAA CAAGCAATCAAGATAATTTGGCTCCAATTACAGCTAAAGCAAAAGTGGTTATTGAACTGCTTTTATCGGTCTCGGGAGTTGCTAAACCTT CCCAGGTGTATTTTGGAGGTACAGTTGTTGGCGAGCAAGCTATGAAATCTGAAGATGAAGTGGGAAGTTTAATAGAGTATGAATTCAGGG TAATAAACTTAGGTAAACCTCTTACAAACCTCGGCACAGCAACCTTGAACATTCAGTGGCCAAAAGAAATTAGCAATGGGAAATGGTTGC TTTATTTGGTGAAAGTAGAATCCAAAGGATTGGAAAAGGTAACTTGTGAGCCACAAAAGGAGATAAACTCCCTGAACCTAACGGAGTCTC ACAACTCAAGAAAGAAACGGGAAATTACTGAAAAACAGATAGATGATAACAGAAAATTTTCTTTATTTGCTGAAAGAAAATACCAGACTC TTAACTGTAGCGTGAACGTGAACTGTGTGAACATCAGATGCCCGCTGCGGGGGCTGGACAGCAAGGCGTCTCTTATTTTGCGCTCGAGGT TATGGAACAGCACATTTCTAGAGGAATATTCCAAACTGAACTACTTGGACATTCTCATGCGAGCCTTCATTGATGTGACTGCTGCTGCCG AAAATATCAGGCTGCCAAATGCAGGCACTCAGGTTCGAGTGACTGTGTTTCCCTCAAAGACTGTAGCTCAGTATTCGGGAGTACCTTGGT GGATCATCCTAGTGGCTATTCTCGCTGGGATCTTGATGCTTGCTTTATTAGTGTTTATACTATGGAAGTGTGGATTCTTTAAACGCTCTA GGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAAAGATGAAAAGTATATTGATAACCTTG AAAAAAAACAGTGGATCACAAAGTGGAACGAAAATGAAAGCTACTCATAGCGGGGGCCTAAAAAAAAAAAGCTTCACAGTACCCAAACTG CTTTTTCCAACTCAGAAATTCAATTTGGATTTAAAAGCCTGCTCAATCCCTGAGGACTGATTTCAGAGTGACTACACACAGTACGAACCT ACAGTTTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAAACTGTTGGAATGGATTTTTCTTTAAC TGCCGTAATTTAACTTTCTGGGTTGCCTTTATTTTTGGCGTGGCTGACTTACATCATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAG GTGACATCCTCCAGATAGTGTAGCTGAGGAGGCACCTACACTCACCTGCACTAACAGAGTGGCCGTCCTAACCTCGGGCCTGCTGCGCAG ACGTCCATCACGTTAGCTGTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGCTGTCTTAAACTAAATGTG CAATAGAAGGTGATGTTGCCATCCTACCGTCTTTTCCTGTTTCCTAGCTGTGTGAATACCTGCTCACGTCAAATGCATACAAGTTTCATT CTCCCTTTCACTAAAACACACAGGTGCAACAGACTTGAATGCTAGTTATACTTATTTGTATATGGTATTTATTTTTTCTTTTCTTTACAA ACCATTTTGTTATTGACTAACAGGCCAAAGAGTCTCCAGTTTACCCTTCAGGTTGGTTTAATCAATCAGAATTAGAGCATGGGAGGTCAT CACTTTGACCTAAATTATTTACTGCAAAAAGAAAATCTTTATAAATGTACCAGAGAGAGTTGTTTTAATAACTTATCTATAAACTATAAC CTCTCCTTCATGACAGCCTCCACCCCACAACCCAAAAGGTTTAAGAAATAGAATTATAACTGTAAAGATGTTTATTTCAGGCATTGGATA TTTTTTACTTTAGAAGCCTGCATAATGTTTCTGGATTTCATACTGTAACATTCAGGAATTCTTGGAGAAAATGGGTTTATTCACTGAACT CTAGTGCGGTTTACTCACTGCTGCAAATACTGTATATTCAGGACTTGAAAGAAATGGTGAATGCCTATGGTGGATCCAAACTGATCCAGT ATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGATGTTCTATTTTTTGTTTTGTTTCCTCCCCTATCTGTATTCCCAA AAATTACTTTGGGGCTAATTTAACAAGAACTTTAAATTGTGTTTTAATTGTAAAAATGGCAGGGGGTGGAATTATTACTCTATACATTCA ACAGAGACTGAATAGATATGAAAGCTGATTTTTTTTAATTACCATGCTTCACAATGTTAAGTTATATGGGGAGCAACAGCAAACAGGTGC TAATTTGTTTTGGATATAGTATAAGCAGTGTCTGTGTTTTGAAAGAATAGAACACAGTTTGTAGTGCCACTGTTGTTTTGGGGGGGCTTT TTTCTTTTCGGAAATCTTAAACCTTAAGATACTAAGGACGTTGTTTTGGTTGTACTTTGGAATTCTTAGTCACAAAATATATTTTGTTTA CAAAAATTTCTGTAAAACAGGTTATAACAGTGTTTAAAGTCTCAGTTTCTTGCTTGGGGAACTTGTGTCCCTAATGTGTTTAGATTGCTA GATTGCTAAGGAGCTGATACTTTGACAGTGTTTTTAGACCTGTGTTACTAAAAAAAAGATGAATGTCCTGAAAAGGGTGTTGGGAGGGTG GTTCAACAAAGAAACAAAGATGTTATGGTGTTTAGATTTATGGTTGTTAAAAATGTCATCTCAAGTCAAGTCACTGGTCTGTTTGCATTT GATACATTTTTGTACTAACTAGCATTGTAAAATTATTTCATGATTAGAAATTACCTGTGGATATTTGTATAAAAGTGTGAAATAAATTTT TTATAAAAGTGTTCATTGTTTCGTAACACAGCATTGTATATGTGAAGCAAACTCTAAAATTATAAATGACAACCTGAATTATCTATTTCA TCAAACCAAAGTTCAGTGTTTTTATTTTTGGTGTCTCATGTAATCTCAGATCAGCCAAAGATACTAGTGCCAAAGCAATGGGATTCGGGG TTTTTTTCTGTTTTCGCTCTATGTAGGTGATCCTCAAGTCTTTCATTTTCCTTCTTTATGATTAAAAGAAACCTACAGGTATTTAACAAC >82541_82541_1_SLC25A12-ITGA6_SLC25A12_chr2_172749714_ENST00000422440_ITGA6_chr2_173333852_ENST00000264106_length(amino acids)=1023AA_BP=18 MAVKVQTTKRGDPHELRNIFLQTCAHRYEKRQHVNTKQESRDIFGRCYVLSQNLRIEDDMDGGDWSFCDGRLRGHEKFGSCQQGVAATFT KDFHYIVFGAPGTYNWKGIVRVEQKNNTFFDMNIFEDGPYEVGGETEHDESLVPVPANSYLGLLFLTSVSYTDPDQFVYKTRPPREQPDT FPDVMMNSYLGFSLDSGKGIVSKDEITFVSGAPRANHSGAVVLLKRDMKSAHLLPEHIFDGEGLASSFGYDVAVVDLNKDGWQDIVIGAP QYFDRDGEVGGAVYVYMNQQGRWNNVKPIRLNGTKDSMFGIAVKNIGDINQDGYPDIAVGAPYDDLGKVFIYHGSANGINTKPTQVLKGI SPYFGYSIAGNMDLDRNSYPDVAVGSLSDSVTIFRSRPVINIQKTITVTPNRIDLRQKTACGAPSGICLQVKSCFEYTANPAGYNPSISI VGTLEAEKERRKSGLSSRVQFRNQGSEPKYTQELTLKRQKQKVCMEETLWLQDNIRDKLRPIPITASVEIQEPSSRRRVNSLPEVLPILN SDEPKTAHIDVHFLKEGCGDDNVCNSNLKLEYKFCTREGNQDKFSYLPIQKGVPELVLKDQKDIALEITVTNSPSNPRNPTKDGDDAHEA KLIATFPDTLTYSAYRELRAFPEKQLSCVANQNGSQADCELGNPFKRNSNVTFYLVLSTTEVTFDTPDLDINLKLETTSNQDNLAPITAK AKVVIELLLSVSGVAKPSQVYFGGTVVGEQAMKSEDEVGSLIEYEFRVINLGKPLTNLGTATLNIQWPKEISNGKWLLYLVKVESKGLEK VTCEPQKEINSLNLTESHNSRKKREITEKQIDDNRKFSLFAERKYQTLNCSVNVNCVNIRCPLRGLDSKASLILRSRLWNSTFLEEYSKL NYLDILMRAFIDVTAAAENIRLPNAGTQVRVTVFPSKTVAQYSGVPWWIILVAILAGILMLALLVFILWKCGFFKRSRYDDSVPRYHAVR -------------------------------------------------------------- >82541_82541_2_SLC25A12-ITGA6_SLC25A12_chr2_172749714_ENST00000422440_ITGA6_chr2_173333852_ENST00000264107_length(transcript)=5101nt_BP=104nt GCTCGCTCACTCGCTCGTCCCCGGCTTCCGAGCACAGCATGGCGGTCAAGGTGCAGACAACTAAGCGAGGGGATCCTCATGAGTTAAGAA ACATATTTCTACAGACATGTGCTCACCGATATGAAAAAAGGCAGCATGTTAATACGAAGCAGGAATCCCGAGACATCTTTGGGCGGTGTT ATGTCCTGAGTCAGAATCTCAGGATTGAAGACGATATGGATGGGGGAGATTGGAGCTTTTGTGATGGGCGATTGAGAGGCCATGAGAAAT TTGGCTCTTGCCAGCAAGGTGTAGCAGCTACTTTTACTAAAGACTTTCATTACATTGTATTTGGAGCCCCGGGTACTTATAACTGGAAAG GGATTGTTCGTGTAGAGCAAAAGAATAACACTTTTTTTGACATGAACATCTTTGAAGATGGGCCTTATGAAGTTGGTGGAGAGACTGAGC ATGATGAAAGTCTCGTTCCTGTTCCTGCTAACAGTTACTTAGGTTTTTCTTTGGACTCAGGGAAAGGTATTGTTTCTAAAGATGAGATCA CTTTTGTATCTGGTGCTCCCAGAGCCAATCACAGTGGAGCCGTGGTTTTGCTGAAGAGAGACATGAAGTCTGCACATCTCCTCCCTGAGC ACATATTCGATGGAGAAGGTCTGGCCTCTTCATTTGGCTATGATGTGGCGGTGGTGGACCTCAACAAGGATGGGTGGCAAGATATAGTTA TTGGAGCCCCACAGTATTTTGATAGAGATGGAGAAGTTGGAGGTGCAGTGTATGTCTACATGAACCAGCAAGGCAGATGGAATAATGTGA AGCCAATTCGTCTTAATGGAACCAAAGATTCTATGTTTGGCATTGCAGTAAAAAATATTGGAGATATTAATCAAGATGGCTACCCAGATA TTGCAGTTGGAGCTCCGTATGATGACTTGGGAAAGGTTTTTATCTATCATGGATCTGCAAATGGAATAAATACCAAACCAACACAGGTTC TCAAGGGTATATCACCTTATTTTGGATATTCAATTGCTGGAAACATGGACCTTGATCGAAATTCCTACCCTGATGTTGCTGTTGGTTCCC TCTCAGATTCAGTAACTATTTTCAGATCCCGGCCTGTGATTAATATTCAGAAAACCATCACAGTAACTCCTAACAGAATTGACCTCCGCC AGAAAACAGCGTGTGGGGCGCCTAGTGGGATATGCCTCCAGGTTAAATCCTGTTTTGAATATACTGCTAACCCCGCTGGTTATAATCCTT CAATATCAATTGTGGGCACACTTGAAGCTGAAAAAGAAAGAAGAAAATCTGGGCTATCCTCAAGAGTTCAGTTTCGAAACCAAGGTTCTG AGCCCAAATATACTCAAGAACTAACTCTGAAGAGGCAGAAACAGAAAGTGTGCATGGAGGAAACCCTGTGGCTACAGGATAATATCAGAG ATAAACTGCGTCCCATTCCCATAACTGCCTCAGTGGAGATCCAAGAGCCAAGCTCTCGTAGGCGAGTGAATTCACTTCCAGAAGTTCTTC CAATTCTGAATTCAGATGAACCCAAGACAGCTCATATTGATGTTCACTTCTTAAAAGAGGGATGTGGAGACGACAATGTATGTAACAGCA ACCTTAAACTAGAATATAAATTTTGCACCCGAGAAGGAAATCAAGACAAATTTTCTTATTTACCAATTCAAAAAGGTGTACCAGAACTAG TTCTAAAAGATCAGAAGGATATTGCTTTAGAAATAACAGTGACAAACAGCCCTTCCAACCCAAGGAATCCCACAAAAGATGGCGATGACG CCCATGAGGCTAAACTGATTGCAACGTTTCCAGACACTTTAACCTATTCTGCATATAGAGAACTGAGGGCTTTCCCTGAGAAACAGTTGA GTTGTGTTGCCAACCAGAATGGCTCGCAAGCTGACTGTGAGCTCGGAAATCCTTTTAAAAGAAATTCAAATGTCACTTTTTATTTGGTTT TAAGTACAACTGAAGTCACCTTTGACACCCCAGATCTGGATATTAATCTGAAGTTAGAAACAACAAGCAATCAAGATAATTTGGCTCCAA TTACAGCTAAAGCAAAAGTGGTTATTGAACTGCTTTTATCGGTCTCGGGAGTTGCTAAACCTTCCCAGGTGTATTTTGGAGGTACAGTTG TTGGCGAGCAAGCTATGAAATCTGAAGATGAAGTGGGAAGTTTAATAGAGTATGAATTCAGGGTAATAAACTTAGGTAAACCTCTTACAA ACCTCGGCACAGCAACCTTGAACATTCAGTGGCCAAAAGAAATTAGCAATGGGAAATGGTTGCTTTATTTGGTGAAAGTAGAATCCAAAG GATTGGAAAAGGTAACTTGTGAGCCACAAAAGGAGATAAACTCCCTGAACCTAACGGAGTCTCACAACTCAAGAAAGAAACGGGAAATTA CTGAAAAACAGATAGATGATAACAGAAAATTTTCTTTATTTGCTGAAAGAAAATACCAGACTCTTAACTGTAGCGTGAACGTGAACTGTG TGAACATCAGATGCCCGCTGCGGGGGCTGGACAGCAAGGCGTCTCTTATTTTGCGCTCGAGGTTATGGAACAGCACATTTCTAGAGGAAT ATTCCAAACTGAACTACTTGGACATTCTCATGCGAGCCTTCATTGATGTGACTGCTGCTGCCGAAAATATCAGGCTGCCAAATGCAGGCA CTCAGGTTCGAGTGACTGTGTTTCCCTCAAAGACTGTAGCTCAGTATTCGGGAGTACCTTGGTGGATCATCCTAGTGGCTATTCTCGCTG GGATCTTGATGCTTGCTTTATTAGTGTTTATACTATGGAAGTGTGGTTTCTTCAAGAGAAATAAGAAAGATCATTATGATGCCACATATC ACAAGGCTGAGATCCATGCTCAGCCATCTGATAAAGAGAGGCTTACTTCTGATGCATAGTATTGATCTACTTCTGTAATTGTGTGGATTC TTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAAAGATGAAAAGTAT ATTGATAACCTTGAAAAAAAACAGTGGATCACAAAGTGGAACGAAAATGAAAGCTACTCATAGCGGGGGCCTAAAAAAAAAAAGCTTCAC AGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGATTTAAAAGCCTGCTCAATCCCTGAGGACTGATTTCAGAGTGACTACAC ACAGTACGAACCTACAGTTTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAAACTGTTGGAATGG ATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATTTTTGGCGTGGCTGACTTACATCATGTGTTGGGGAAGGGCCTGCC CAGTTGCACTCAGGTGACATCCTCCAGATAGTGTAGCTGAGGAGGCACCTACACTCACCTGCACTAACAGAGTGGCCGTCCTAACCTCGG GCCTGCTGCGCAGACGTCCATCACGTTAGCTGTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGCTGTCT TAAACTAAATGTGCAATAGAAGGTGATGTTGCCATCCTACCGTCTTTTCCTGTTTCCTAGCTGTGTGAATACCTGCTCACGTCAAATGCA TACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTTGAATGCTAGTTATACTTATTTGTATATGGTATTTATTTTTT CTTTTCTTTACAAACCATTTTGTTATTGACTAACAGGCCAAAGAGTCTCCAGTTTACCCTTCAGGTTGGTTTAATCAATCAGAATTAGAG CATGGGAGGTCATCACTTTGACCTAAATTATTTACTGCAAAAAGAAAATCTTTATAAATGTACCAGAGAGAGTTGTTTTAATAACTTATC TATAAACTATAACCTCTCCTTCATGACAGCCTCCACCCCACAACCCAAAAGGTTTAAGAAATAGAATTATAACTGTAAAGATGTTTATTT CAGGCATTGGATATTTTTTACTTTAGAAGCCTGCATAATGTTTCTGGATTTCATACTGTAACATTCAGGAATTCTTGGAGAAAATGGGTT TATTCACTGAACTCTAGTGCGGTTTACTCACTGCTGCAAATACTGTATATTCAGGACTTGAAAGAAATGGTGAATGCCTATGGTGGATCC AAACTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGATGTTCTATTTTTTGTTTTGTTTCCTCCCCTA TCTGTATTCCCAAAAATTACTTTGGGGCTAATTTAACAAGAACTTTAAATTGTGTTTTAATTGTAAAAATGGCAGGGGGTGGAATTATTA CTCTATACATTCAACAGAGACTGAATAGATATGAAAGCTGATTTTTTTTAATTACCATGCTTCACAATGTTAAGTTATATGGGGAGCAAC AGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGTCTGTGTTTTGAAAGAATAGAACACAGTTTGTAGTGCCACTGTTGTT TTGGGGGGGCTTTTTTCTTTTCGGAAATCTTAAACCTTAAGATACTAAGGACGTTGTTTTGGTTGTACTTTGGAATTCTTAGTCACAAAA TATATTTTGTTTACAAAAATTTCTGTAAAACAGGTTATAACAGTGTTTAAAGTCTCAGTTTCTTGCTTGGGGAACTTGTGTCCCTAATGT GTTTAGATTGCTAGATTGCTAAGGAGCTGATACTTTGACAGTGTTTTTAGACCTGTGTTACTAAAAAAAAGATGAATGTCCTGAAAAGGG TGTTGGGAGGGTGGTTCAACAAAGAAACAAAGATGTTATGGTGTTTAGATTTATGGTTGTTAAAAATGTCATCTCAAGTCAAGTCACTGG TCTGTTTGCATTTGATACATTTTTGTACTAACTAGCATTGTAAAATTATTTCATGATTAGAAATTACCTGTGGATATTTGTATAAAAGTG >82541_82541_2_SLC25A12-ITGA6_SLC25A12_chr2_172749714_ENST00000422440_ITGA6_chr2_173333852_ENST00000264107_length(amino acids)=966AA_BP=18 MAVKVQTTKRGDPHELRNIFLQTCAHRYEKRQHVNTKQESRDIFGRCYVLSQNLRIEDDMDGGDWSFCDGRLRGHEKFGSCQQGVAATFT KDFHYIVFGAPGTYNWKGIVRVEQKNNTFFDMNIFEDGPYEVGGETEHDESLVPVPANSYLGFSLDSGKGIVSKDEITFVSGAPRANHSG AVVLLKRDMKSAHLLPEHIFDGEGLASSFGYDVAVVDLNKDGWQDIVIGAPQYFDRDGEVGGAVYVYMNQQGRWNNVKPIRLNGTKDSMF GIAVKNIGDINQDGYPDIAVGAPYDDLGKVFIYHGSANGINTKPTQVLKGISPYFGYSIAGNMDLDRNSYPDVAVGSLSDSVTIFRSRPV INIQKTITVTPNRIDLRQKTACGAPSGICLQVKSCFEYTANPAGYNPSISIVGTLEAEKERRKSGLSSRVQFRNQGSEPKYTQELTLKRQ KQKVCMEETLWLQDNIRDKLRPIPITASVEIQEPSSRRRVNSLPEVLPILNSDEPKTAHIDVHFLKEGCGDDNVCNSNLKLEYKFCTREG NQDKFSYLPIQKGVPELVLKDQKDIALEITVTNSPSNPRNPTKDGDDAHEAKLIATFPDTLTYSAYRELRAFPEKQLSCVANQNGSQADC ELGNPFKRNSNVTFYLVLSTTEVTFDTPDLDINLKLETTSNQDNLAPITAKAKVVIELLLSVSGVAKPSQVYFGGTVVGEQAMKSEDEVG SLIEYEFRVINLGKPLTNLGTATLNIQWPKEISNGKWLLYLVKVESKGLEKVTCEPQKEINSLNLTESHNSRKKREITEKQIDDNRKFSL FAERKYQTLNCSVNVNCVNIRCPLRGLDSKASLILRSRLWNSTFLEEYSKLNYLDILMRAFIDVTAAAENIRLPNAGTQVRVTVFPSKTV -------------------------------------------------------------- >82541_82541_3_SLC25A12-ITGA6_SLC25A12_chr2_172749714_ENST00000422440_ITGA6_chr2_173333852_ENST00000343713_length(transcript)=5309nt_BP=104nt GCTCGCTCACTCGCTCGTCCCCGGCTTCCGAGCACAGCATGGCGGTCAAGGTGCAGACAACTAAGCGAGGGGATCCTCATGAGTTAAGAA ACATATTTCTACAGACATGTGCTCACCGATATGAAAAAAGGCAGCATGTTAATACGAAGCAGGAATCCCGAGACATCTTTGGGCGGTGTT ATGTCCTGAGTCAGAATCTCAGGATTGAAGACGATATGGATGGGGGAGATTGGAGCTTTTGTGATGGGCGATTGAGAGGCCATGAGAAAT TTGGCTCTTGCCAGCAAGGTGTAGCAGCTACTTTTACTAAAGACTTTCATTACATTGTATTTGGAGCCCCGGGTACTTATAACTGGAAAG GCCTGCTGTTTTTGACCAGCGTTTCCTATACAGATCCTGATCAGTTTGTTTATAAAACACGGCCTCCCCGGGAGCAGCCTGACACATTCC CTGATGTGATGATGAATAGCTACCTAGGTTTTTCTTTGGACTCAGGGAAAGGTATTGTTTCTAAAGATGAGATCACTTTTGTATCTGGTG CTCCCAGAGCCAATCACAGTGGAGCCGTGGTTTTGCTGAAGAGAGACATGAAGTCTGCACATCTCCTCCCTGAGCACATATTCGATGGAG AAGGTCTGGCCTCTTCATTTGGCTATGATGTGGCGGTGGTGGACCTCAACAAGGATGGGTGGCAAGATATAGTTATTGGAGCCCCACAGT ATTTTGATAGAGATGGAGAAGTTGGAGGTGCAGTGTATGTCTACATGAACCAGCAAGGCAGATGGAATAATGTGAAGCCAATTCGTCTTA ATGGAACCAAAGATTCTATGTTTGGCATTGCAGTAAAAAATATTGGAGATATTAATCAAGATGGCTACCCAGATATTGCAGTTGGAGCTC CGTATGATGACTTGGGAAAGGTTTTTATCTATCATGGATCTGCAAATGGAATAAATACCAAACCAACACAGGTTCTCAAGGGTATATCAC CTTATTTTGGATATTCAATTGCTGGAAACATGGACCTTGATCGAAATTCCTACCCTGATGTTGCTGTTGGTTCCCTCTCAGATTCAGTAA CTATTTTCAGATCCCGGCCTGTGATTAATATTCAGAAAACCATCACAGTAACTCCTAACAGAATTGACCTCCGCCAGAAAACAGCGTGTG GGGCGCCTAGTGGGATATGCCTCCAGGTTAAATCCTGTTTTGAATATACTGCTAACCCCGCTGGTTATAATCCTTCAATATCAATTGTGG GCACACTTGAAGCTGAAAAAGAAAGAAGAAAATCTGGGCTATCCTCAAGAGTTCAGTTTCGAAACCAAGGTTCTGAGCCCAAATATACTC AAGAACTAACTCTGAAGAGGCAGAAACAGAAAGTGTGCATGGAGGAAACCCTGTGGCTACAGGATAATATCAGAGATAAACTGCGTCCCA TTCCCATAACTGCCTCAGTGGAGATCCAAGAGCCAAGCTCTCGTAGGCGAGTGAATTCACTTCCAGAAGTTCTTCCAATTCTGAATTCAG ATGAACCCAAGACAGCTCATATTGATGTTCACTTCTTAAAAGAGGGATGTGGAGACGACAATGTATGTAACAGCAACCTTAAACTAGAAT ATAAATTTTGCACCCGAGAAGGAAATCAAGACAAATTTTCTTATTTACCAATTCAAAAAGGTGTACCAGAACTAGTTCTAAAAGATCAGA AGGATATTGCTTTAGAAATAACAGTGACAAACAGCCCTTCCAACCCAAGGAATCCCACAAAAGATGGCGATGACGCCCATGAGGCTAAAC TGATTGCAACGTTTCCAGACACTTTAACCTATTCTGCATATAGAGAACTGAGGGCTTTCCCTGAGAAACAGTTGAGTTGTGTTGCCAACC AGAATGGCTCGCAAGCTGACTGTGAGCTCGGAAATCCTTTTAAAAGAAATTCAAATGTCACTTTTTATTTGGTTTTAAGTACAACTGAAG TCACCTTTGACACCCCAGATCTGGATATTAATCTGAAGTTAGAAACAACAAGCAATCAAGATAATTTGGCTCCAATTACAGCTAAAGCAA AAGTGGTTATTGAACTGCTTTTATCGGTCTCGGGAGTTGCTAAACCTTCCCAGGTGTATTTTGGAGGTACAGTTGTTGGCGAGCAAGCTA TGAAATCTGAAGATGAAGTGGGAAGTTTAATAGAGTATGAATTCAGGGTAATAAACTTAGGTAAACCTCTTACAAACCTCGGCACAGCAA CCTTGAACATTCAGTGGCCAAAAGAAATTAGCAATGGGAAATGGTTGCTTTATTTGGTGAAAGTAGAATCCAAAGGATTGGAAAAGGTAA CTTGTGAGCCACAAAAGGAGATAAACTCCCTGAACCTAACGGAGTCTCACAACTCAAGAAAGAAACGGGAAATTACTGAAAAACAGATAG ATGATAACAGAAAATTTTCTTTATTTGCTGAAAGAAAATACCAGACTCTTAACTGTAGCGTGAACGTGAACTGTGTGAACATCAGATGCC CGCTGCGGGGGCTGGACAGCAAGGCGTCTCTTATTTTGCGCTCGAGGTTATGGAACAGCACATTTCTAGAGGAATATTCCAAACTGAACT ACTTGGACATTCTCATGCGAGCCTTCATTGATGTGACTGCTGCTGCCGAAAATATCAGGCTGCCAAATGCAGGCACTCAGGTTCGAGTGA CTGTGTTTCCCTCAAAGACTGTAGCTCAGTATTCGGGAGTACCTTGGTGGATCATCCTAGTGGCTATTCTCGCTGGGATCTTGATGCTTG CTTTATTAGTGTTTATACTATGGAAGTGTGGTTTCTTCAAGAGAAATAAGAAAGATCATTATGATGCCACATATCACAAGGCTGAGATCC ATGCTCAGCCATCTGATAAAGAGAGGCTTACTTCTGATGCATAGTATTGATCTACTTCTGTAATTGTGTGGATTCTTTAAACGCTCTAGG TACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAAAGATGAAAAGTATATTGATAACCTTGAA AAAAAACAGTGGATCACAAAGTGGAACGAAAATGAAAGCTACTCATAGCGGGGGCCTAAAAAAAAAAAGCTTCACAGTACCCAAACTGCT TTTTCCAACTCAGAAATTCAATTTGGATTTAAAAGCCTGCTCAATCCCTGAGGACTGATTTCAGAGTGACTACACACAGTACGAACCTAC AGTTTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAAACTGTTGGAATGGATTTTTCTTTAACTG CCGTAATTTAACTTTCTGGGTTGCCTTTATTTTTGGCGTGGCTGACTTACATCATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGT GACATCCTCCAGATAGTGTAGCTGAGGAGGCACCTACACTCACCTGCACTAACAGAGTGGCCGTCCTAACCTCGGGCCTGCTGCGCAGAC GTCCATCACGTTAGCTGTCCCACATCACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGCTGTCTTAAACTAAATGTGCA ATAGAAGGTGATGTTGCCATCCTACCGTCTTTTCCTGTTTCCTAGCTGTGTGAATACCTGCTCACGTCAAATGCATACAAGTTTCATTCT CCCTTTCACTAAAACACACAGGTGCAACAGACTTGAATGCTAGTTATACTTATTTGTATATGGTATTTATTTTTTCTTTTCTTTACAAAC CATTTTGTTATTGACTAACAGGCCAAAGAGTCTCCAGTTTACCCTTCAGGTTGGTTTAATCAATCAGAATTAGAGCATGGGAGGTCATCA CTTTGACCTAAATTATTTACTGCAAAAAGAAAATCTTTATAAATGTACCAGAGAGAGTTGTTTTAATAACTTATCTATAAACTATAACCT CTCCTTCATGACAGCCTCCACCCCACAACCCAAAAGGTTTAAGAAATAGAATTATAACTGTAAAGATGTTTATTTCAGGCATTGGATATT TTTTACTTTAGAAGCCTGCATAATGTTTCTGGATTTCATACTGTAACATTCAGGAATTCTTGGAGAAAATGGGTTTATTCACTGAACTCT AGTGCGGTTTACTCACTGCTGCAAATACTGTATATTCAGGACTTGAAAGAAATGGTGAATGCCTATGGTGGATCCAAACTGATCCAGTAT AAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGATGTTCTATTTTTTGTTTTGTTTCCTCCCCTATCTGTATTCCCAAAA ATTACTTTGGGGCTAATTTAACAAGAACTTTAAATTGTGTTTTAATTGTAAAAATGGCAGGGGGTGGAATTATTACTCTATACATTCAAC AGAGACTGAATAGATATGAAAGCTGATTTTTTTTAATTACCATGCTTCACAATGTTAAGTTATATGGGGAGCAACAGCAAACAGGTGCTA ATTTGTTTTGGATATAGTATAAGCAGTGTCTGTGTTTTGAAAGAATAGAACACAGTTTGTAGTGCCACTGTTGTTTTGGGGGGGCTTTTT TCTTTTCGGAAATCTTAAACCTTAAGATACTAAGGACGTTGTTTTGGTTGTACTTTGGAATTCTTAGTCACAAAATATATTTTGTTTACA AAAATTTCTGTAAAACAGGTTATAACAGTGTTTAAAGTCTCAGTTTCTTGCTTGGGGAACTTGTGTCCCTAATGTGTTTAGATTGCTAGA TTGCTAAGGAGCTGATACTTTGACAGTGTTTTTAGACCTGTGTTACTAAAAAAAAGATGAATGTCCTGAAAAGGGTGTTGGGAGGGTGGT TCAACAAAGAAACAAAGATGTTATGGTGTTTAGATTTATGGTTGTTAAAAATGTCATCTCAAGTCAAGTCACTGGTCTGTTTGCATTTGA TACATTTTTGTACTAACTAGCATTGTAAAATTATTTCATGATTAGAAATTACCTGTGGATATTTGTATAAAAGTGTGAAATAAATTTTTT ATAAAAGTGTTCATTGTTTCGTAACACAGCATTGTATATGTGAAGCAAACTCTAAAATTATAAATGACAACCTGAATTATCTATTTCATC AAACCAAAGTTCAGTGTTTTTATTTTTGGTGTCTCATGTAATCTCAGATCAGCCAAAGATACTAGTGCCAAAGCAATGGGATTCGGGGTT >82541_82541_3_SLC25A12-ITGA6_SLC25A12_chr2_172749714_ENST00000422440_ITGA6_chr2_173333852_ENST00000343713_length(amino acids)=961AA_BP=18 MAVKVQTTKRGDPHELRNIFLQTCAHRYEKRQHVNTKQESRDIFGRCYVLSQNLRIEDDMDGGDWSFCDGRLRGHEKFGSCQQGVAATFT KDFHYIVFGAPGTYNWKGLLFLTSVSYTDPDQFVYKTRPPREQPDTFPDVMMNSYLGFSLDSGKGIVSKDEITFVSGAPRANHSGAVVLL KRDMKSAHLLPEHIFDGEGLASSFGYDVAVVDLNKDGWQDIVIGAPQYFDRDGEVGGAVYVYMNQQGRWNNVKPIRLNGTKDSMFGIAVK NIGDINQDGYPDIAVGAPYDDLGKVFIYHGSANGINTKPTQVLKGISPYFGYSIAGNMDLDRNSYPDVAVGSLSDSVTIFRSRPVINIQK TITVTPNRIDLRQKTACGAPSGICLQVKSCFEYTANPAGYNPSISIVGTLEAEKERRKSGLSSRVQFRNQGSEPKYTQELTLKRQKQKVC MEETLWLQDNIRDKLRPIPITASVEIQEPSSRRRVNSLPEVLPILNSDEPKTAHIDVHFLKEGCGDDNVCNSNLKLEYKFCTREGNQDKF SYLPIQKGVPELVLKDQKDIALEITVTNSPSNPRNPTKDGDDAHEAKLIATFPDTLTYSAYRELRAFPEKQLSCVANQNGSQADCELGNP FKRNSNVTFYLVLSTTEVTFDTPDLDINLKLETTSNQDNLAPITAKAKVVIELLLSVSGVAKPSQVYFGGTVVGEQAMKSEDEVGSLIEY EFRVINLGKPLTNLGTATLNIQWPKEISNGKWLLYLVKVESKGLEKVTCEPQKEINSLNLTESHNSRKKREITEKQIDDNRKFSLFAERK YQTLNCSVNVNCVNIRCPLRGLDSKASLILRSRLWNSTFLEEYSKLNYLDILMRAFIDVTAAAENIRLPNAGTQVRVTVFPSKTVAQYSG -------------------------------------------------------------- >82541_82541_4_SLC25A12-ITGA6_SLC25A12_chr2_172749714_ENST00000422440_ITGA6_chr2_173333852_ENST00000375221_length(transcript)=5441nt_BP=104nt GCTCGCTCACTCGCTCGTCCCCGGCTTCCGAGCACAGCATGGCGGTCAAGGTGCAGACAACTAAGCGAGGGGATCCTCATGAGTTAAGAA ACATATTTCTACAGACATGTGCTCACCGATATGAAAAAAGGCAGCATGTTAATACGAAGCAGGAATCCCGAGACATCTTTGGGCGGTGTT ATGTCCTGAGTCAGAATCTCAGGATTGAAGACGATATGGATGGGGGAGATTGGAGCTTTTGTGATGGGCGATTGAGAGGCCATGAGAAAT TTGGCTCTTGCCAGCAAGGTGTAGCAGCTACTTTTACTAAAGACTTTCATTACATTGTATTTGGAGCCCCGGGTACTTATAACTGGAAAG GGATTGTTCGTGTAGAGCAAAAGAATAACACTTTTTTTGACATGAACATCTTTGAAGATGGGCCTTATGAAGTTGGTGGAGAGACTGAGC ATGATGAAAGTCTCGTTCCTGTTCCTGCTAACAGTTACTTAGGCCTGCTGTTTTTGACCAGCGTTTCCTATACAGATCCTGATCAGTTTG TTTATAAAACACGGCCTCCCCGGGAGCAGCCTGACACATTCCCTGATGTGATGATGAATAGCTACCTAGGTTTTTCTTTGGACTCAGGGA AAGGTATTGTTTCTAAAGATGAGATCACTTTTGTATCTGGTGCTCCCAGAGCCAATCACAGTGGAGCCGTGGTTTTGCTGAAGAGAGACA TGAAGTCTGCACATCTCCTCCCTGAGCACATATTCGATGGAGAAGGTCTGGCCTCTTCATTTGGCTATGATGTGGCGGTGGTGGACCTCA ACAAGGATGGGTGGCAAGATATAGTTATTGGAGCCCCACAGTATTTTGATAGAGATGGAGAAGTTGGAGGTGCAGTGTATGTCTACATGA ACCAGCAAGGCAGATGGAATAATGTGAAGCCAATTCGTCTTAATGGAACCAAAGATTCTATGTTTGGCATTGCAGTAAAAAATATTGGAG ATATTAATCAAGATGGCTACCCAGATATTGCAGTTGGAGCTCCGTATGATGACTTGGGAAAGGTTTTTATCTATCATGGATCTGCAAATG GAATAAATACCAAACCAACACAGGTTCTCAAGGGTATATCACCTTATTTTGGATATTCAATTGCTGGAAACATGGACCTTGATCGAAATT CCTACCCTGATGTTGCTGTTGGTTCCCTCTCAGATTCAGTAACTATTTTCAGATCCCGGCCTGTGATTAATATTCAGAAAACCATCACAG TAACTCCTAACAGAATTGACCTCCGCCAGAAAACAGCGTGTGGGGCGCCTAGTGGGATATGCCTCCAGGTTAAATCCTGTTTTGAATATA CTGCTAACCCCGCTGGTTATAATCCTTCAATATCAATTGTGGGCACACTTGAAGCTGAAAAAGAAAGAAGAAAATCTGGGCTATCCTCAA GAGTTCAGTTTCGAAACCAAGGTTCTGAGCCCAAATATACTCAAGAACTAACTCTGAAGAGGCAGAAACAGAAAGTGTGCATGGAGGAAA CCCTGTGGCTACAGGATAATATCAGAGATAAACTGCGTCCCATTCCCATAACTGCCTCAGTGGAGATCCAAGAGCCAAGCTCTCGTAGGC GAGTGAATTCACTTCCAGAAGTTCTTCCAATTCTGAATTCAGATGAACCCAAGACAGCTCATATTGATGTTCACTTCTTAAAAGAGGGAT GTGGAGACGACAATGTATGTAACAGCAACCTTAAACTAGAATATAAATTTTGCACCCGAGAAGGAAATCAAGACAAATTTTCTTATTTAC CAATTCAAAAAGGTGTACCAGAACTAGTTCTAAAAGATCAGAAGGATATTGCTTTAGAAATAACAGTGACAAACAGCCCTTCCAACCCAA GGAATCCCACAAAAGATGGCGATGACGCCCATGAGGCTAAACTGATTGCAACGTTTCCAGACACTTTAACCTATTCTGCATATAGAGAAC TGAGGGCTTTCCCTGAGAAACAGTTGAGTTGTGTTGCCAACCAGAATGGCTCGCAAGCTGACTGTGAGCTCGGAAATCCTTTTAAAAGAA ATTCAAATGTCACTTTTTATTTGGTTTTAAGTACAACTGAAGTCACCTTTGACACCCCAGATCTGGATATTAATCTGAAGTTAGAAACAA CAAGCAATCAAGATAATTTGGCTCCAATTACAGCTAAAGCAAAAGTGGTTATTGAACTGCTTTTATCGGTCTCGGGAGTTGCTAAACCTT CCCAGGTGTATTTTGGAGGTACAGTTGTTGGCGAGCAAGCTATGAAATCTGAAGATGAAGTGGGAAGTTTAATAGAGTATGAATTCAGGG TAATAAACTTAGGTAAACCTCTTACAAACCTCGGCACAGCAACCTTGAACATTCAGTGGCCAAAAGAAATTAGCAATGGGAAATGGTTGC TTTATTTGGTGAAAGTAGAATCCAAAGGATTGGAAAAGGTAACTTGTGAGCCACAAAAGGAGATAAACTCCCTGAACCTAACGGAGTCTC ACAACTCAAGAAAGAAACGGGAAATTACTGAAAAACAGATAGATGATAACAGAAAATTTTCTTTATTTGCTGAAAGAAAATACCAGACTC TTAACTGTAGCGTGAACGTGAACTGTGTGAACATCAGATGCCCGCTGCGGGGGCTGGACAGCAAGGCGTCTCTTATTTTGCGCTCGAGGT TATGGAACAGCACATTTCTAGAGGAATATTCCAAACTGAACTACTTGGACATTCTCATGCGAGCCTTCATTGATGTGACTGCTGCTGCCG AAAATATCAGGCTGCCAAATGCAGGCACTCAGGTTCGAGTGACTGTGTTTCCCTCAAAGACTGTAGCTCAGTATTCGGGAGTACCTTGGT GGATCATCCTAGTGGCTATTCTCGCTGGGATCTTGATGCTTGCTTTATTAGTGTTTATACTATGGAAGTGTGGTTTCTTCAAGAGAAATA AGAAAGATCATTATGATGCCACATATCACAAGGCTGAGATCCATGCTCAGCCATCTGATAAAGAGAGGCTTACTTCTGATGCATAGTATT GATCTACTTCTGTAATTGTGTGGATTCTTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAA GAGCGAGAGATCAAAGATGAAAAGTATATTGATAACCTTGAAAAAAAACAGTGGATCACAAAGTGGAACGAAAATGAAAGCTACTCATAG CGGGGGCCTAAAAAAAAAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTGGATTTAAAAGCCTGCTCAATCCC TGAGGACTGATTTCAGAGTGACTACACACAGTACGAACCTACAGTTTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCA CAGCCAAATTTAAAACTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCCTTTATTTTTGGCGTGGCTGACTT ACATCATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGATAGTGTAGCTGAGGAGGCACCTACACTCACCTGCA CTAACAGAGTGGCCGTCCTAACCTCGGGCCTGCTGCGCAGACGTCCATCACGTTAGCTGTCCCACATCACAAGACTATGCCATTGGGGTA GTTGTGTTTCAACGGAAAGTGCTGTCTTAAACTAAATGTGCAATAGAAGGTGATGTTGCCATCCTACCGTCTTTTCCTGTTTCCTAGCTG TGTGAATACCTGCTCACGTCAAATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGCAACAGACTTGAATGCTAGTTATA CTTATTTGTATATGGTATTTATTTTTTCTTTTCTTTACAAACCATTTTGTTATTGACTAACAGGCCAAAGAGTCTCCAGTTTACCCTTCA GGTTGGTTTAATCAATCAGAATTAGAGCATGGGAGGTCATCACTTTGACCTAAATTATTTACTGCAAAAAGAAAATCTTTATAAATGTAC CAGAGAGAGTTGTTTTAATAACTTATCTATAAACTATAACCTCTCCTTCATGACAGCCTCCACCCCACAACCCAAAAGGTTTAAGAAATA GAATTATAACTGTAAAGATGTTTATTTCAGGCATTGGATATTTTTTACTTTAGAAGCCTGCATAATGTTTCTGGATTTCATACTGTAACA TTCAGGAATTCTTGGAGAAAATGGGTTTATTCACTGAACTCTAGTGCGGTTTACTCACTGCTGCAAATACTGTATATTCAGGACTTGAAA GAAATGGTGAATGCCTATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCTGCTACCAAAACAGTTAATCAGTGAGTCGATGTT CTATTTTTTGTTTTGTTTCCTCCCCTATCTGTATTCCCAAAAATTACTTTGGGGCTAATTTAACAAGAACTTTAAATTGTGTTTTAATTG TAAAAATGGCAGGGGGTGGAATTATTACTCTATACATTCAACAGAGACTGAATAGATATGAAAGCTGATTTTTTTTAATTACCATGCTTC ACAATGTTAAGTTATATGGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCAGTGTCTGTGTTTTGAAAGAATAG AACACAGTTTGTAGTGCCACTGTTGTTTTGGGGGGGCTTTTTTCTTTTCGGAAATCTTAAACCTTAAGATACTAAGGACGTTGTTTTGGT TGTACTTTGGAATTCTTAGTCACAAAATATATTTTGTTTACAAAAATTTCTGTAAAACAGGTTATAACAGTGTTTAAAGTCTCAGTTTCT TGCTTGGGGAACTTGTGTCCCTAATGTGTTTAGATTGCTAGATTGCTAAGGAGCTGATACTTTGACAGTGTTTTTAGACCTGTGTTACTA AAAAAAAGATGAATGTCCTGAAAAGGGTGTTGGGAGGGTGGTTCAACAAAGAAACAAAGATGTTATGGTGTTTAGATTTATGGTTGTTAA AAATGTCATCTCAAGTCAAGTCACTGGTCTGTTTGCATTTGATACATTTTTGTACTAACTAGCATTGTAAAATTATTTCATGATTAGAAA TTACCTGTGGATATTTGTATAAAAGTGTGAAATAAATTTTTTATAAAAGTGTTCATTGTTTCGTAACACAGCATTGTATATGTGAAGCAA ACTCTAAAATTATAAATGACAACCTGAATTATCTATTTCATCAAACCAAAGTTCAGTGTTTTTATTTTTGGTGTCTCATGTAATCTCAGA TCAGCCAAAGATACTAGTGCCAAAGCAATGGGATTCGGGGTTTTTTTCTGTTTTCGCTCTATGTAGGTGATCCTCAAGTCTTTCATTTTC >82541_82541_4_SLC25A12-ITGA6_SLC25A12_chr2_172749714_ENST00000422440_ITGA6_chr2_173333852_ENST00000375221_length(amino acids)=1005AA_BP=18 MAVKVQTTKRGDPHELRNIFLQTCAHRYEKRQHVNTKQESRDIFGRCYVLSQNLRIEDDMDGGDWSFCDGRLRGHEKFGSCQQGVAATFT KDFHYIVFGAPGTYNWKGIVRVEQKNNTFFDMNIFEDGPYEVGGETEHDESLVPVPANSYLGLLFLTSVSYTDPDQFVYKTRPPREQPDT FPDVMMNSYLGFSLDSGKGIVSKDEITFVSGAPRANHSGAVVLLKRDMKSAHLLPEHIFDGEGLASSFGYDVAVVDLNKDGWQDIVIGAP QYFDRDGEVGGAVYVYMNQQGRWNNVKPIRLNGTKDSMFGIAVKNIGDINQDGYPDIAVGAPYDDLGKVFIYHGSANGINTKPTQVLKGI SPYFGYSIAGNMDLDRNSYPDVAVGSLSDSVTIFRSRPVINIQKTITVTPNRIDLRQKTACGAPSGICLQVKSCFEYTANPAGYNPSISI VGTLEAEKERRKSGLSSRVQFRNQGSEPKYTQELTLKRQKQKVCMEETLWLQDNIRDKLRPIPITASVEIQEPSSRRRVNSLPEVLPILN SDEPKTAHIDVHFLKEGCGDDNVCNSNLKLEYKFCTREGNQDKFSYLPIQKGVPELVLKDQKDIALEITVTNSPSNPRNPTKDGDDAHEA KLIATFPDTLTYSAYRELRAFPEKQLSCVANQNGSQADCELGNPFKRNSNVTFYLVLSTTEVTFDTPDLDINLKLETTSNQDNLAPITAK AKVVIELLLSVSGVAKPSQVYFGGTVVGEQAMKSEDEVGSLIEYEFRVINLGKPLTNLGTATLNIQWPKEISNGKWLLYLVKVESKGLEK VTCEPQKEINSLNLTESHNSRKKREITEKQIDDNRKFSLFAERKYQTLNCSVNVNCVNIRCPLRGLDSKASLILRSRLWNSTFLEEYSKL NYLDILMRAFIDVTAAAENIRLPNAGTQVRVTVFPSKTVAQYSGVPWWIILVAILAGILMLALLVFILWKCGFFKRNKKDHYDATYHKAE -------------------------------------------------------------- >82541_82541_5_SLC25A12-ITGA6_SLC25A12_chr2_172749714_ENST00000422440_ITGA6_chr2_173333852_ENST00000409080_length(transcript)=5015nt_BP=104nt GCTCGCTCACTCGCTCGTCCCCGGCTTCCGAGCACAGCATGGCGGTCAAGGTGCAGACAACTAAGCGAGGGGATCCTCATGAGTTAAGAA ACATATTTCTACAGACATGTGCTCACCGATATGAAAAAAGGCAGCATGTTAATACGAAGCAGGAATCCCGAGACATCTTTGGGCGGTGTT ATGTCCTGAGTCAGAATCTCAGGATTGAAGACGATATGGATGGGGGAGATTGGAGCTTTTGTGATGGGCGATTGAGAGGCCATGAGAAAT TTGGCTCTTGCCAGCAAGGTGTAGCAGCTACTTTTACTAAAGACTTTCATTACATTGTATTTGGAGCCCCGGGTACTTATAACTGGAAAG GGATTGTTCGTGTAGAGCAAAAGAATAACACTTTTTTTGACATGAACATCTTTGAAGATGGGCCTTATGAAGTTGGTGGAGAGACTGAGC ATGATGAAAGTCTCGTTCCTGTTCCTGCTAACAGTTACTTAGGTTTTTCTTTGGACTCAGGGAAAGGTATTGTTTCTAAAGATGAGATCA CTTTTGTATCTGGTGCTCCCAGAGCCAATCACAGTGGAGCCGTGGTTTTGCTGAAGAGAGACATGAAGTCTGCACATCTCCTCCCTGAGC ACATATTCGATGGAGAAGGTCTGGCCTCTTCATTTGGCTATGATGTGGCGGTGGTGGACCTCAACAAGGATGGGTGGCAAGATATAGTTA TTGGAGCCCCACAGTATTTTGATAGAGATGGAGAAGTTGGAGGTGCAGTGTATGTCTACATGAACCAGCAAGGCAGATGGAATAATGTGA AGCCAATTCGTCTTAATGGAACCAAAGATTCTATGTTTGGCATTGCAGTAAAAAATATTGGAGATATTAATCAAGATGGCTACCCAGATA TTGCAGTTGGAGCTCCGTATGATGACTTGGGAAAGGTTTTTATCTATCATGGATCTGCAAATGGAATAAATACCAAACCAACACAGGTTC TCAAGGGTATATCACCTTATTTTGGATATTCAATTGCTGGAAACATGGACCTTGATCGAAATTCCTACCCTGATGTTGCTGTTGGTTCCC TCTCAGATTCAGTAACTATTTTCAGATCCCGGCCTGTGATTAATATTCAGAAAACCATCACAGTAACTCCTAACAGAATTGACCTCCGCC AGAAAACAGCGTGTGGGGCGCCTAGTGGGATATGCCTCCAGGTTAAATCCTGTTTTGAATATACTGCTAACCCCGCTGGTTATAATCCTT CAATATCAATTGTGGGCACACTTGAAGCTGAAAAAGAAAGAAGAAAATCTGGGCTATCCTCAAGAGTTCAGTTTCGAAACCAAGGTTCTG AGCCCAAATATACTCAAGAACTAACTCTGAAGAGGCAGAAACAGAAAGTGTGCATGGAGGAAACCCTGTGGCTACAGGATAATATCAGAG ATAAACTGCGTCCCATTCCCATAACTGCCTCAGTGGAGATCCAAGAGCCAAGCTCTCGTAGGCGAGTGAATTCACTTCCAGAAGTTCTTC CAATTCTGAATTCAGATGAACCCAAGACAGCTCATATTGATGTTCACTTCTTAAAAGAGGGATGTGGAGACGACAATGTATGTAACAGCA ACCTTAAACTAGAATATAAATTTTGCACCCGAGAAGGAAATCAAGACAAATTTTCTTATTTACCAATTCAAAAAGGTGTACCAGAACTAG TTCTAAAAGATCAGAAGGATATTGCTTTAGAAATAACAGTGACAAACAGCCCTTCCAACCCAAGGAATCCCACAAAAGATGGCGATGACG CCCATGAGGCTAAACTGATTGCAACGTTTCCAGACACTTTAACCTATTCTGCATATAGAGAACTGAGGGCTTTCCCTGAGAAACAGTTGA GTTGTGTTGCCAACCAGAATGGCTCGCAAGCTGACTGTGAGCTCGGAAATCCTTTTAAAAGAAATTCAAATGTCACTTTTTATTTGGTTT TAAGTACAACTGAAGTCACCTTTGACACCCCAGATCTGGATATTAATCTGAAGTTAGAAACAACAAGCAATCAAGATAATTTGGCTCCAA TTACAGCTAAAGCAAAAGTGGTTATTGAACTGCTTTTATCGGTCTCGGGAGTTGCTAAACCTTCCCAGGTGTATTTTGGAGGTACAGTTG TTGGCGAGCAAGCTATGAAATCTGAAGATGAAGTGGGAAGTTTAATAGAGTATGAATTCAGGGTAATAAACTTAGGTAAACCTCTTACAA ACCTCGGCACAGCAACCTTGAACATTCAGTGGCCAAAAGAAATTAGCAATGGGAAATGGTTGCTTTATTTGGTGAAAGTAGAATCCAAAG GATTGGAAAAGGTAACTTGTGAGCCACAAAAGGAGATAAACTCCCTGAACCTAACGGAGTCTCACAACTCAAGAAAGAAACGGGAAATTA CTGAAAAACAGATAGATGATAACAGAAAATTTTCTTTATTTGCTGAAAGAAAATACCAGACTCTTAACTGTAGCGTGAACGTGAACTGTG TGAACATCAGATGCCCGCTGCGGGGGCTGGACAGCAAGGCGTCTCTTATTTTGCGCTCGAGGTTATGGAACAGCACATTTCTAGAGGAAT ATTCCAAACTGAACTACTTGGACATTCTCATGCGAGCCTTCATTGATGTGACTGCTGCTGCCGAAAATATCAGGCTGCCAAATGCAGGCA CTCAGGTTCGAGTGACTGTGTTTCCCTCAAAGACTGTAGCTCAGTATTCGGGAGTACCTTGGTGGATCATCCTAGTGGCTATTCTCGCTG GGATCTTGATGCTTGCTTTATTAGTGTTTATACTATGGAAGTGTGGATTCTTTAAACGCTCTAGGTACGATGACAGTGTTCCCCGATACC ATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAAAGATGAAAAGTATATTGATAACCTTGAAAAAAAACAGTGGATCACAAAGTGGA ACGAAAATGAAAGCTACTCATAGCGGGGGCCTAAAAAAAAAAAGCTTCACAGTACCCAAACTGCTTTTTCCAACTCAGAAATTCAATTTG GATTTAAAAGCCTGCTCAATCCCTGAGGACTGATTTCAGAGTGACTACACACAGTACGAACCTACAGTTTTAACTGTGGATATTGTTACG TAGCCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAAACTGTTGGAATGGATTTTTCTTTAACTGCCGTAATTTAACTTTCTGGGTTGCC TTTATTTTTGGCGTGGCTGACTTACATCATGTGTTGGGGAAGGGCCTGCCCAGTTGCACTCAGGTGACATCCTCCAGATAGTGTAGCTGA GGAGGCACCTACACTCACCTGCACTAACAGAGTGGCCGTCCTAACCTCGGGCCTGCTGCGCAGACGTCCATCACGTTAGCTGTCCCACAT CACAAGACTATGCCATTGGGGTAGTTGTGTTTCAACGGAAAGTGCTGTCTTAAACTAAATGTGCAATAGAAGGTGATGTTGCCATCCTAC CGTCTTTTCCTGTTTCCTAGCTGTGTGAATACCTGCTCACGTCAAATGCATACAAGTTTCATTCTCCCTTTCACTAAAACACACAGGTGC AACAGACTTGAATGCTAGTTATACTTATTTGTATATGGTATTTATTTTTTCTTTTCTTTACAAACCATTTTGTTATTGACTAACAGGCCA AAGAGTCTCCAGTTTACCCTTCAGGTTGGTTTAATCAATCAGAATTAGAGCATGGGAGGTCATCACTTTGACCTAAATTATTTACTGCAA AAAGAAAATCTTTATAAATGTACCAGAGAGAGTTGTTTTAATAACTTATCTATAAACTATAACCTCTCCTTCATGACAGCCTCCACCCCA CAACCCAAAAGGTTTAAGAAATAGAATTATAACTGTAAAGATGTTTATTTCAGGCATTGGATATTTTTTACTTTAGAAGCCTGCATAATG TTTCTGGATTTCATACTGTAACATTCAGGAATTCTTGGAGAAAATGGGTTTATTCACTGAACTCTAGTGCGGTTTACTCACTGCTGCAAA TACTGTATATTCAGGACTTGAAAGAAATGGTGAATGCCTATGGTGGATCCAAACTGATCCAGTATAAGACTACTGAATCTGCTACCAAAA CAGTTAATCAGTGAGTCGATGTTCTATTTTTTGTTTTGTTTCCTCCCCTATCTGTATTCCCAAAAATTACTTTGGGGCTAATTTAACAAG AACTTTAAATTGTGTTTTAATTGTAAAAATGGCAGGGGGTGGAATTATTACTCTATACATTCAACAGAGACTGAATAGATATGAAAGCTG ATTTTTTTTAATTACCATGCTTCACAATGTTAAGTTATATGGGGAGCAACAGCAAACAGGTGCTAATTTGTTTTGGATATAGTATAAGCA GTGTCTGTGTTTTGAAAGAATAGAACACAGTTTGTAGTGCCACTGTTGTTTTGGGGGGGCTTTTTTCTTTTCGGAAATCTTAAACCTTAA GATACTAAGGACGTTGTTTTGGTTGTACTTTGGAATTCTTAGTCACAAAATATATTTTGTTTACAAAAATTTCTGTAAAACAGGTTATAA CAGTGTTTAAAGTCTCAGTTTCTTGCTTGGGGAACTTGTGTCCCTAATGTGTTTAGATTGCTAGATTGCTAAGGAGCTGATACTTTGACA GTGTTTTTAGACCTGTGTTACTAAAAAAAAGATGAATGTCCTGAAAAGGGTGTTGGGAGGGTGGTTCAACAAAGAAACAAAGATGTTATG GTGTTTAGATTTATGGTTGTTAAAAATGTCATCTCAAGTCAAGTCACTGGTCTGTTTGCATTTGATACATTTTTGTACTAACTAGCATTG TAAAATTATTTCATGATTAGAAATTACCTGTGGATATTTGTATAAAAGTGTGAAATAAATTTTTTATAAAAGTGTTCATTGTTTCGTAAC >82541_82541_5_SLC25A12-ITGA6_SLC25A12_chr2_172749714_ENST00000422440_ITGA6_chr2_173333852_ENST00000409080_length(amino acids)=984AA_BP=18 MAVKVQTTKRGDPHELRNIFLQTCAHRYEKRQHVNTKQESRDIFGRCYVLSQNLRIEDDMDGGDWSFCDGRLRGHEKFGSCQQGVAATFT KDFHYIVFGAPGTYNWKGIVRVEQKNNTFFDMNIFEDGPYEVGGETEHDESLVPVPANSYLGFSLDSGKGIVSKDEITFVSGAPRANHSG AVVLLKRDMKSAHLLPEHIFDGEGLASSFGYDVAVVDLNKDGWQDIVIGAPQYFDRDGEVGGAVYVYMNQQGRWNNVKPIRLNGTKDSMF GIAVKNIGDINQDGYPDIAVGAPYDDLGKVFIYHGSANGINTKPTQVLKGISPYFGYSIAGNMDLDRNSYPDVAVGSLSDSVTIFRSRPV INIQKTITVTPNRIDLRQKTACGAPSGICLQVKSCFEYTANPAGYNPSISIVGTLEAEKERRKSGLSSRVQFRNQGSEPKYTQELTLKRQ KQKVCMEETLWLQDNIRDKLRPIPITASVEIQEPSSRRRVNSLPEVLPILNSDEPKTAHIDVHFLKEGCGDDNVCNSNLKLEYKFCTREG NQDKFSYLPIQKGVPELVLKDQKDIALEITVTNSPSNPRNPTKDGDDAHEAKLIATFPDTLTYSAYRELRAFPEKQLSCVANQNGSQADC ELGNPFKRNSNVTFYLVLSTTEVTFDTPDLDINLKLETTSNQDNLAPITAKAKVVIELLLSVSGVAKPSQVYFGGTVVGEQAMKSEDEVG SLIEYEFRVINLGKPLTNLGTATLNIQWPKEISNGKWLLYLVKVESKGLEKVTCEPQKEINSLNLTESHNSRKKREITEKQIDDNRKFSL FAERKYQTLNCSVNVNCVNIRCPLRGLDSKASLILRSRLWNSTFLEEYSKLNYLDILMRAFIDVTAAAENIRLPNAGTQVRVTVFPSKTV -------------------------------------------------------------- >82541_82541_6_SLC25A12-ITGA6_SLC25A12_chr2_172749714_ENST00000422440_ITGA6_chr2_173333852_ENST00000409532_length(transcript)=3390nt_BP=104nt GCTCGCTCACTCGCTCGTCCCCGGCTTCCGAGCACAGCATGGCGGTCAAGGTGCAGACAACTAAGCGAGGGGATCCTCATGAGTTAAGAA ACATATTTCTACAGACATGTGCTCACCGATATGAAAAAAGGCAGCATGTTAATACGAAGCAGGAATCCCGAGACATCTTTGGGCGGTGTT ATGTCCTGAGTCAGAATCTCAGGATTGAAGACGATATGGATGGGGGAGATTGGAGCTTTTGTGATGGGCGATTGAGAGGCCATGAGAAAT TTGGCTCTTGCCAGCAAGGTGTAGCAGCTACTTTTACTAAAGACTTTCATTACATTGTATTTGGAGCCCCGGGTACTTATAACTGGAAAG GCCTGCTGTTTTTGACCAGCGTTTCCTATACAGATCCTGATCAGTTTGTTTATAAAACACGGCCTCCCCGGGAGCAGCCTGACACATTCC CTGATGTGATGATGAATAGCTACCTAGGTTTTTCTTTGGACTCAGGGAAAGGTATTGTTTCTAAAGATGAGATCACTTTTGTATCTGGTG CTCCCAGAGCCAATCACAGTGGAGCCGTGGTTTTGCTGAAGAGAGACATGAAGTCTGCACATCTCCTCCCTGAGCACATATTCGATGGAG AAGGTCTGGCCTCTTCATTTGGCTATGATGTGGCGGTGGTGGACCTCAACAAGGATGGGTGGCAAGATATAGTTATTGGAGCCCCACAGT ATTTTGATAGAGATGGAGAAGTTGGAGGTGCAGTGTATGTCTACATGAACCAGCAAGGCAGATGGAATAATGTGAAGCCAATTCGTCTTA ATGGAACCAAAGATTCTATGTTTGGCATTGCAGTAAAAAATATTGGAGATATTAATCAAGATGGCTACCCAGATATTGCAGTTGGAGCTC CGTATGATGACTTGGGAAAGGTTTTTATCTATCATGGATCTGCAAATGGAATAAATACCAAACCAACACAGGTTCTCAAGGGTATATCAC CTTATTTTGGATATTCAATTGCTGGAAACATGGACCTTGATCGAAATTCCTACCCTGATGTTGCTGTTGGTTCCCTCTCAGATTCAGTAA CTATTTTCAGATCCCGGCCTGTGATTAATATTCAGAAAACCATCACAGTAACTCCTAACAGAATTGACCTCCGCCAGAAAACAGCGTGTG GGGCGCCTAGTGGGATATGCCTCCAGGTTAAATCCTGTTTTGAATATACTGCTAACCCCGCTGGTTATAATCCTTCAATATCAATTGTGG GCACACTTGAAGCTGAAAAAGAAAGAAGAAAATCTGGGCTATCCTCAAGAGTTCAGTTTCGAAACCAAGGTTCTGAGCCCAAATATACTC AAGAACTAACTCTGAAGAGGCAGAAACAGAAAGTGTGCATGGAGGAAACCCTGTGGCTACAGGATAATATCAGAGATAAACTGCGTCCCA TTCCCATAACTGCCTCAGTGGAGATCCAAGAGCCAAGCTCTCGTAGGCGAGTGAATTCACTTCCAGAAGTTCTTCCAATTCTGAATTCAG ATGAACCCAAGACAGCTCATATTGATGTTCACTTCTTAAAAGAGGGATGTGGAGACGACAATGTATGTAACAGCAACCTTAAACTAGAAT ATAAATTTTGCACCCGAGAAGGAAATCAAGACAAATTTTCTTATTTACCAATTCAAAAAGGTGTACCAGAACTAGTTCTAAAAGATCAGA AGGATATTGCTTTAGAAATAACAGTGACAAACAGCCCTTCCAACCCAAGGAATCCCACAAAAGATGGCGATGACGCCCATGAGGCTAAAC TGATTGCAACGTTTCCAGACACTTTAACCTATTCTGCATATAGAGAACTGAGGGCTTTCCCTGAGAAACAGTTGAGTTGTGTTGCCAACC AGAATGGCTCGCAAGCTGACTGTGAGCTCGGAAATCCTTTTAAAAGAAATTCAAATGTCACTTTTTATTTGGTTTTAAGTACAACTGAAG TCACCTTTGACACCCCAGATCTGGATATTAATCTGAAGTTAGAAACAACAAGCAATCAAGATAATTTGGCTCCAATTACAGCTAAAGCAA AAGTGGTTATTGAACTGCTTTTATCGGTCTCGGGAGTTGCTAAACCTTCCCAGGTGTATTTTGGAGGTACAGTTGTTGGCGAGCAAGCTA TGAAATCTGAAGATGAAGTGGGAAGTTTAATAGAGTATGAATTCAGGGTAATAAACTTAGGTAAACCTCTTACAAACCTCGGCACAGCAA CCTTGAACATTCAGTGGCCAAAAGAAATTAGCAATGGGAAATGGTTGCTTTATTTGGTGAAAGTAGAATCCAAAGGATTGGAAAAGGTAA CTTGTGAGCCACAAAAGGAGATAAACTCCCTGAACCTAACGGAGTCTCACAACTCAAGAAAGAAACGGGAAATTACTGAAAAACAGATAG ATGATAACAGAAAATTTTCTTTATTTGCTGAAAGAAAATACCAGACTCTTAACTGTAGCGTGAACGTGAACTGTGTGAACATCAGATGCC CGCTGCGGGGGCTGGACAGCAAGGCGTCTCTTATTTTGCGCTCGAGGTTATGGAACAGCACATTTCTAGAGGAATATTCCAAACTGAACT ACTTGGACATTCTCATGCGAGCCTTCATTGATGTGACTGCTGCTGCCGAAAATATCAGGCTGCCAAATGCAGGCACTCAGGTTCGAGTGA CTGTGTTTCCCTCAAAGACTGTAGCTCAGTATTCGGGAGTACCTTGGTGGATCATCCTAGTGGCTATTCTCGCTGGGATCTTGATGCTTG CTTTATTAGTGTTTATACTATGGAAGTGTGGTTTCTTCAAGAGAAATAAGAAAGATCATTATGATGCCACATATCACAAGGCTGAGATCC ATGCTCAGCCATCTGATAAAGAGAGGCTTACTTCTGATGCATAGTATTGATCTACTTCTGTAATTGTGTGGATTCTTTAAACGCTCTAGG TACGATGACAGTGTTCCCCGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGATCAAAGATGAAAAGTATATTGATAACCTTGAA AAAAAACAGTGGATCACAAAGTGGAACGAAAATGAAAGCTACTCATAGCGGGGGCCTAAAAAAAAAAAGCTTCACAGTACCCAAACTGCT TTTTCCAACTCAGAAATTCAATTTGGATTTAAAAGCCTGCTCAATCCCTGAGGACTGATTTCAGAGTGACTACACACAGTACGAACCTAC AGTTTTAACTGTGGATATTGTTACGTAGCCTAAGGCTCCTGTTTTGCACAGCCAAATTTAAAACTGTTGGAATGGATTTTTCTTTAACTG >82541_82541_6_SLC25A12-ITGA6_SLC25A12_chr2_172749714_ENST00000422440_ITGA6_chr2_173333852_ENST00000409532_length(amino acids)=961AA_BP=18 MAVKVQTTKRGDPHELRNIFLQTCAHRYEKRQHVNTKQESRDIFGRCYVLSQNLRIEDDMDGGDWSFCDGRLRGHEKFGSCQQGVAATFT KDFHYIVFGAPGTYNWKGLLFLTSVSYTDPDQFVYKTRPPREQPDTFPDVMMNSYLGFSLDSGKGIVSKDEITFVSGAPRANHSGAVVLL KRDMKSAHLLPEHIFDGEGLASSFGYDVAVVDLNKDGWQDIVIGAPQYFDRDGEVGGAVYVYMNQQGRWNNVKPIRLNGTKDSMFGIAVK NIGDINQDGYPDIAVGAPYDDLGKVFIYHGSANGINTKPTQVLKGISPYFGYSIAGNMDLDRNSYPDVAVGSLSDSVTIFRSRPVINIQK TITVTPNRIDLRQKTACGAPSGICLQVKSCFEYTANPAGYNPSISIVGTLEAEKERRKSGLSSRVQFRNQGSEPKYTQELTLKRQKQKVC MEETLWLQDNIRDKLRPIPITASVEIQEPSSRRRVNSLPEVLPILNSDEPKTAHIDVHFLKEGCGDDNVCNSNLKLEYKFCTREGNQDKF SYLPIQKGVPELVLKDQKDIALEITVTNSPSNPRNPTKDGDDAHEAKLIATFPDTLTYSAYRELRAFPEKQLSCVANQNGSQADCELGNP FKRNSNVTFYLVLSTTEVTFDTPDLDINLKLETTSNQDNLAPITAKAKVVIELLLSVSGVAKPSQVYFGGTVVGEQAMKSEDEVGSLIEY EFRVINLGKPLTNLGTATLNIQWPKEISNGKWLLYLVKVESKGLEKVTCEPQKEINSLNLTESHNSRKKREITEKQIDDNRKFSLFAERK YQTLNCSVNVNCVNIRCPLRGLDSKASLILRSRLWNSTFLEEYSKLNYLDILMRAFIDVTAAAENIRLPNAGTQVRVTVFPSKTVAQYSG -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for SLC25A12-ITGA6 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264106 | 2 | 26 | 1077_1083 | 129.0 | 1131.0 | HPS5 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000264107 | 2 | 26 | 1077_1083 | 129.0 | 1648.6666666666667 | HPS5 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000343713 | 2 | 26 | 1077_1083 | 129.0 | 1728.3333333333333 | HPS5 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000375221 | 2 | 27 | 1077_1083 | 129.0 | 1772.3333333333333 | HPS5 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409080 | 2 | 25 | 1077_1083 | 129.0 | 1092.0 | HPS5 | |
Tgene | ITGA6 | chr2:172749714 | chr2:173333852 | ENST00000409532 | 2 | 26 | 1077_1083 | 15.0 | 1085.3333333333333 | HPS5 |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for SLC25A12-ITGA6 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for SLC25A12-ITGA6 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |