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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:SLC9A3-ZDHHC11 (FusionGDB2 ID:83551)

Fusion Gene Summary for SLC9A3-ZDHHC11

check button Fusion gene summary
Fusion gene informationFusion gene name: SLC9A3-ZDHHC11
Fusion gene ID: 83551
HgeneTgene
Gene symbol

SLC9A3

ZDHHC11

Gene ID

6550

79844

Gene namesolute carrier family 9 member A3zinc finger DHHC-type containing 11
SynonymsDIAR8|NHE-3|NHE3ZNF399
Cytomap

5p15.33

5p15.33

Type of geneprotein-codingprotein-coding
Descriptionsodium/hydrogen exchanger 3Na(+)/H(+) exchanger 3solute carrier family 9 (sodium/hydrogen exchanger)solute carrier family 9 (sodium/hydrogen exchanger), member 3solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3probable palmitoyltransferase ZDHHC11DHHC-11zinc finger DHHC domain-containing protein 11zinc finger protein 399zinc finger, DHHC domain containing 11
Modification date2020031320200313
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000264938, ENST00000514375, 
ENST00000283441, ENST00000503758, 
ENST00000511539, ENST00000424784, 
Fusion gene scores* DoF score2 X 3 X 2=125 X 3 X 6=90
# samples 37
** MAII scorelog2(3/12*10)=1.32192809488736
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0		log2(7/90*10)=-0.362570079384708
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: SLC9A3 [Title/Abstract] AND ZDHHC11 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointSLC9A3(488430)-ZDHHC11(801279), # samples:1
SLC9A3(524227)-ZDHHC11(801279), # samples:1
SLC9A3(488431)-ZDHHC11(801279), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneSLC9A3

GO:0098719

sodium ion import across plasma membrane

26358773


check buttonFusion gene breakpoints across SLC9A3 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across ZDHHC11 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4LGGTCGA-P5-A780SLC9A3chr5

524227

-ZDHHC11chr5

801279

-
ChimerDB4STADTCGA-BR-8362-01ASLC9A3chr5

488431

-ZDHHC11chr5

801279

-
ChimerDB4STADTCGA-BR-8362SLC9A3chr5

488430

-ZDHHC11chr5

801279

-


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Fusion Gene ORF analysis for SLC9A3-ZDHHC11

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-5UTRENST00000264938ENST00000283441SLC9A3chr5

524227

-ZDHHC11chr5

801279

-
5CDS-5UTRENST00000264938ENST00000283441SLC9A3chr5

488431

-ZDHHC11chr5

801279

-
5CDS-5UTRENST00000264938ENST00000283441SLC9A3chr5

488430

-ZDHHC11chr5

801279

-
5CDS-5UTRENST00000264938ENST00000503758SLC9A3chr5

524227

-ZDHHC11chr5

801279

-
5CDS-5UTRENST00000264938ENST00000503758SLC9A3chr5

488431

-ZDHHC11chr5

801279

-
5CDS-5UTRENST00000264938ENST00000503758SLC9A3chr5

488430

-ZDHHC11chr5

801279

-
5CDS-5UTRENST00000514375ENST00000283441SLC9A3chr5

524227

-ZDHHC11chr5

801279

-
5CDS-5UTRENST00000514375ENST00000283441SLC9A3chr5

488431

-ZDHHC11chr5

801279

-
5CDS-5UTRENST00000514375ENST00000283441SLC9A3chr5

488430

-ZDHHC11chr5

801279

-
5CDS-5UTRENST00000514375ENST00000503758SLC9A3chr5

524227

-ZDHHC11chr5

801279

-
5CDS-5UTRENST00000514375ENST00000503758SLC9A3chr5

488431

-ZDHHC11chr5

801279

-
5CDS-5UTRENST00000514375ENST00000503758SLC9A3chr5

488430

-ZDHHC11chr5

801279

-
5CDS-intronENST00000264938ENST00000511539SLC9A3chr5

524227

-ZDHHC11chr5

801279

-
5CDS-intronENST00000264938ENST00000511539SLC9A3chr5

488431

-ZDHHC11chr5

801279

-
5CDS-intronENST00000264938ENST00000511539SLC9A3chr5

488430

-ZDHHC11chr5

801279

-
5CDS-intronENST00000514375ENST00000511539SLC9A3chr5

524227

-ZDHHC11chr5

801279

-
5CDS-intronENST00000514375ENST00000511539SLC9A3chr5

488431

-ZDHHC11chr5

801279

-
5CDS-intronENST00000514375ENST00000511539SLC9A3chr5

488430

-ZDHHC11chr5

801279

-
In-frameENST00000264938ENST00000424784SLC9A3chr5

524227

-ZDHHC11chr5

801279

-
In-frameENST00000264938ENST00000424784SLC9A3chr5

488431

-ZDHHC11chr5

801279

-
In-frameENST00000264938ENST00000424784SLC9A3chr5

488430

-ZDHHC11chr5

801279

-
In-frameENST00000514375ENST00000424784SLC9A3chr5

524227

-ZDHHC11chr5

801279

-
In-frameENST00000514375ENST00000424784SLC9A3chr5

488431

-ZDHHC11chr5

801279

-
In-frameENST00000514375ENST00000424784SLC9A3chr5

488430

-ZDHHC11chr5

801279

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000264938SLC9A3chr5488430-ENST00000424784ZDHHC11chr5801279-17466857391515258
ENST00000514375SLC9A3chr5488430-ENST00000424784ZDHHC11chr5801279-17446837371513258
ENST00000264938SLC9A3chr5524227-ENST00000424784ZDHHC11chr5801279-12822212751051258
ENST00000514375SLC9A3chr5524227-ENST00000424784ZDHHC11chr5801279-12802192731049258
ENST00000264938SLC9A3chr5488431-ENST00000424784ZDHHC11chr5801279-17466857391515258
ENST00000514375SLC9A3chr5488431-ENST00000424784ZDHHC11chr5801279-17446837371513258

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000264938ENST00000424784SLC9A3chr5488430-ZDHHC11chr5801279-0.0104565850.98954344
ENST00000514375ENST00000424784SLC9A3chr5488430-ZDHHC11chr5801279-0.0098471740.9901528
ENST00000264938ENST00000424784SLC9A3chr5524227-ZDHHC11chr5801279-0.87395520.12604487
ENST00000514375ENST00000424784SLC9A3chr5524227-ZDHHC11chr5801279-0.87955190.12044814
ENST00000264938ENST00000424784SLC9A3chr5488431-ZDHHC11chr5801279-0.0104565850.98954344
ENST00000514375ENST00000424784SLC9A3chr5488431-ZDHHC11chr5801279-0.0098471740.9901528

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Fusion Genomic Features for SLC9A3-ZDHHC11


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for SLC9A3-ZDHHC11


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr5:488430/chr5:801279)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-31713_24225835.0IntramembraneName%3DA/M1
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-31755_73225835.0IntramembraneName%3DB/M2
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-31713_24225835.0IntramembraneName%3DA/M1
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-31755_73225835.0IntramembraneName%3DB/M2
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-11713_2470835.0IntramembraneName%3DA/M1
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-11755_7370835.0IntramembraneName%3DB/M2
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317100_112225835.0Topological domainExtracellular
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317134_139225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317161_180225835.0Topological domainExtracellular
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-3171_12225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317203_210225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-31725_54225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-31774_79225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317100_112225835.0Topological domainExtracellular
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317134_139225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317161_180225835.0Topological domainExtracellular
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-3171_12225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317203_210225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-31725_54225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-31774_79225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-1171_1270835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-11725_5470835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317113_133225835.0TransmembraneHelical%3B Name%3DD/M4
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317140_160225835.0TransmembraneHelical%3B Name%3DE/M5
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317181_202225835.0TransmembraneHelical%3B Name%3DF/M5A
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-31780_99225835.0TransmembraneHelical%3B Name%3DC/M3
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317113_133225835.0TransmembraneHelical%3B Name%3DD/M4
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317140_160225835.0TransmembraneHelical%3B Name%3DE/M5
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317181_202225835.0TransmembraneHelical%3B Name%3DF/M5A
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-31780_99225835.0TransmembraneHelical%3B Name%3DC/M3

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317406_426225835.0IntramembraneName%3DL
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317406_426225835.0IntramembraneName%3DL
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117406_42670835.0IntramembraneName%3DL
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317233_252225835.0Topological domainExtracellular
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317275_290225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317310_340225835.0Topological domainExtracellular
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317363_369225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317391_405225835.0Topological domainExtracellular
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317427_435225835.0Topological domainExtracellular
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317457_834225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317233_252225835.0Topological domainExtracellular
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317275_290225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317310_340225835.0Topological domainExtracellular
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317363_369225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317391_405225835.0Topological domainExtracellular
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317427_435225835.0Topological domainExtracellular
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317457_834225835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117100_11270835.0Topological domainExtracellular
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117134_13970835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117161_18070835.0Topological domainExtracellular
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117203_21070835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117233_25270835.0Topological domainExtracellular
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117275_29070835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117310_34070835.0Topological domainExtracellular
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117363_36970835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117391_40570835.0Topological domainExtracellular
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117427_43570835.0Topological domainExtracellular
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117457_83470835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-11774_7970835.0Topological domainCytoplasmic
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317211_232225835.0TransmembraneHelical%3B Name%3DG/M5B
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317253_274225835.0TransmembraneHelical%3B Name%3DH/M6
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317291_309225835.0TransmembraneHelical%3B Name%3DI/M7
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317341_362225835.0TransmembraneHelical%3B Name%3DJ/M8
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317370_390225835.0TransmembraneHelical%3B Name%3DK/M9
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317436_456225835.0TransmembraneHelical%3B Name%3DM/M10
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317211_232225835.0TransmembraneHelical%3B Name%3DG/M5B
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317253_274225835.0TransmembraneHelical%3B Name%3DH/M6
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317291_309225835.0TransmembraneHelical%3B Name%3DI/M7
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317341_362225835.0TransmembraneHelical%3B Name%3DJ/M8
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317370_390225835.0TransmembraneHelical%3B Name%3DK/M9
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317436_456225835.0TransmembraneHelical%3B Name%3DM/M10
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117113_13370835.0TransmembraneHelical%3B Name%3DD/M4
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117140_16070835.0TransmembraneHelical%3B Name%3DE/M5
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117181_20270835.0TransmembraneHelical%3B Name%3DF/M5A
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117211_23270835.0TransmembraneHelical%3B Name%3DG/M5B
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117253_27470835.0TransmembraneHelical%3B Name%3DH/M6
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117291_30970835.0TransmembraneHelical%3B Name%3DI/M7
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117341_36270835.0TransmembraneHelical%3B Name%3DJ/M8
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117370_39070835.0TransmembraneHelical%3B Name%3DK/M9
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117436_45670835.0TransmembraneHelical%3B Name%3DM/M10
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-11780_9970835.0TransmembraneHelical%3B Name%3DC/M3
TgeneZDHHC11chr5:488430chr5:801279ENST000002834411013125_175393497.6666666666667DomainDHHC
TgeneZDHHC11chr5:488430chr5:801279ENST000004247841015125_175393556.3333333333334DomainDHHC
TgeneZDHHC11chr5:488431chr5:801279ENST000002834411013125_175393497.6666666666667DomainDHHC
TgeneZDHHC11chr5:488431chr5:801279ENST000004247841015125_175393556.3333333333334DomainDHHC
TgeneZDHHC11chr5:524227chr5:801279ENST000002834411013125_175393497.6666666666667DomainDHHC
TgeneZDHHC11chr5:524227chr5:801279ENST000004247841015125_175393556.3333333333334DomainDHHC
TgeneZDHHC11chr5:488430chr5:801279ENST000002834411013198_230393497.6666666666667Topological domainLumenal
TgeneZDHHC11chr5:488430chr5:801279ENST0000028344110131_42393497.6666666666667Topological domainCytoplasmic
TgeneZDHHC11chr5:488430chr5:801279ENST000002834411013252_412393497.6666666666667Topological domainCytoplasmic
TgeneZDHHC11chr5:488430chr5:801279ENST00000283441101364_69393497.6666666666667Topological domainLumenal
TgeneZDHHC11chr5:488430chr5:801279ENST00000283441101391_176393497.6666666666667Topological domainCytoplasmic
TgeneZDHHC11chr5:488430chr5:801279ENST000004247841015198_230393556.3333333333334Topological domainLumenal
TgeneZDHHC11chr5:488430chr5:801279ENST0000042478410151_42393556.3333333333334Topological domainCytoplasmic
TgeneZDHHC11chr5:488430chr5:801279ENST000004247841015252_412393556.3333333333334Topological domainCytoplasmic
TgeneZDHHC11chr5:488430chr5:801279ENST00000424784101564_69393556.3333333333334Topological domainLumenal
TgeneZDHHC11chr5:488430chr5:801279ENST00000424784101591_176393556.3333333333334Topological domainCytoplasmic
TgeneZDHHC11chr5:488431chr5:801279ENST000002834411013198_230393497.6666666666667Topological domainLumenal
TgeneZDHHC11chr5:488431chr5:801279ENST0000028344110131_42393497.6666666666667Topological domainCytoplasmic
TgeneZDHHC11chr5:488431chr5:801279ENST000002834411013252_412393497.6666666666667Topological domainCytoplasmic
TgeneZDHHC11chr5:488431chr5:801279ENST00000283441101364_69393497.6666666666667Topological domainLumenal
TgeneZDHHC11chr5:488431chr5:801279ENST00000283441101391_176393497.6666666666667Topological domainCytoplasmic
TgeneZDHHC11chr5:488431chr5:801279ENST000004247841015198_230393556.3333333333334Topological domainLumenal
TgeneZDHHC11chr5:488431chr5:801279ENST0000042478410151_42393556.3333333333334Topological domainCytoplasmic
TgeneZDHHC11chr5:488431chr5:801279ENST000004247841015252_412393556.3333333333334Topological domainCytoplasmic
TgeneZDHHC11chr5:488431chr5:801279ENST00000424784101564_69393556.3333333333334Topological domainLumenal
TgeneZDHHC11chr5:488431chr5:801279ENST00000424784101591_176393556.3333333333334Topological domainCytoplasmic
TgeneZDHHC11chr5:524227chr5:801279ENST000002834411013198_230393497.6666666666667Topological domainLumenal
TgeneZDHHC11chr5:524227chr5:801279ENST0000028344110131_42393497.6666666666667Topological domainCytoplasmic
TgeneZDHHC11chr5:524227chr5:801279ENST000002834411013252_412393497.6666666666667Topological domainCytoplasmic
TgeneZDHHC11chr5:524227chr5:801279ENST00000283441101364_69393497.6666666666667Topological domainLumenal
TgeneZDHHC11chr5:524227chr5:801279ENST00000283441101391_176393497.6666666666667Topological domainCytoplasmic
TgeneZDHHC11chr5:524227chr5:801279ENST000004247841015198_230393556.3333333333334Topological domainLumenal
TgeneZDHHC11chr5:524227chr5:801279ENST0000042478410151_42393556.3333333333334Topological domainCytoplasmic
TgeneZDHHC11chr5:524227chr5:801279ENST000004247841015252_412393556.3333333333334Topological domainCytoplasmic
TgeneZDHHC11chr5:524227chr5:801279ENST00000424784101564_69393556.3333333333334Topological domainLumenal
TgeneZDHHC11chr5:524227chr5:801279ENST00000424784101591_176393556.3333333333334Topological domainCytoplasmic
TgeneZDHHC11chr5:488430chr5:801279ENST000002834411013177_197393497.6666666666667TransmembraneHelical
TgeneZDHHC11chr5:488430chr5:801279ENST000002834411013231_251393497.6666666666667TransmembraneHelical
TgeneZDHHC11chr5:488430chr5:801279ENST00000283441101343_63393497.6666666666667TransmembraneHelical
TgeneZDHHC11chr5:488430chr5:801279ENST00000283441101370_90393497.6666666666667TransmembraneHelical
TgeneZDHHC11chr5:488430chr5:801279ENST000004247841015177_197393556.3333333333334TransmembraneHelical
TgeneZDHHC11chr5:488430chr5:801279ENST000004247841015231_251393556.3333333333334TransmembraneHelical
TgeneZDHHC11chr5:488430chr5:801279ENST00000424784101543_63393556.3333333333334TransmembraneHelical
TgeneZDHHC11chr5:488430chr5:801279ENST00000424784101570_90393556.3333333333334TransmembraneHelical
TgeneZDHHC11chr5:488431chr5:801279ENST000002834411013177_197393497.6666666666667TransmembraneHelical
TgeneZDHHC11chr5:488431chr5:801279ENST000002834411013231_251393497.6666666666667TransmembraneHelical
TgeneZDHHC11chr5:488431chr5:801279ENST00000283441101343_63393497.6666666666667TransmembraneHelical
TgeneZDHHC11chr5:488431chr5:801279ENST00000283441101370_90393497.6666666666667TransmembraneHelical
TgeneZDHHC11chr5:488431chr5:801279ENST000004247841015177_197393556.3333333333334TransmembraneHelical
TgeneZDHHC11chr5:488431chr5:801279ENST000004247841015231_251393556.3333333333334TransmembraneHelical
TgeneZDHHC11chr5:488431chr5:801279ENST00000424784101543_63393556.3333333333334TransmembraneHelical
TgeneZDHHC11chr5:488431chr5:801279ENST00000424784101570_90393556.3333333333334TransmembraneHelical
TgeneZDHHC11chr5:524227chr5:801279ENST000002834411013177_197393497.6666666666667TransmembraneHelical
TgeneZDHHC11chr5:524227chr5:801279ENST000002834411013231_251393497.6666666666667TransmembraneHelical
TgeneZDHHC11chr5:524227chr5:801279ENST00000283441101343_63393497.6666666666667TransmembraneHelical
TgeneZDHHC11chr5:524227chr5:801279ENST00000283441101370_90393497.6666666666667TransmembraneHelical
TgeneZDHHC11chr5:524227chr5:801279ENST000004247841015177_197393556.3333333333334TransmembraneHelical
TgeneZDHHC11chr5:524227chr5:801279ENST000004247841015231_251393556.3333333333334TransmembraneHelical
TgeneZDHHC11chr5:524227chr5:801279ENST00000424784101543_63393556.3333333333334TransmembraneHelical
TgeneZDHHC11chr5:524227chr5:801279ENST00000424784101570_90393556.3333333333334TransmembraneHelical


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Fusion Gene Sequence for SLC9A3-ZDHHC11


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>83551_83551_1_SLC9A3-ZDHHC11_SLC9A3_chr5_488430_ENST00000264938_ZDHHC11_chr5_801279_ENST00000424784_length(transcript)=1746nt_BP=685nt
GCAGGCGGCAATGTGGGGACTCGGGGCCCGGGGCCCCGACCGGGGGCTGCTGCTGGCGCTGGCGCTGGGCGGGCTGGCGCGGGCCGGGGG
CGTCGAGGTGGAGCCCGGCGGCGCGCACGGCGAGAGCGGGGGCTTCCAGGTGGTCACCTTCGAGTGGGCCCACGTGCAGGATCCCTACGT
CATCGCGCTCTGGATCCTCGTGGCCAGCTTGGCCAAGATCGGGTTCCACCTGTCCCACAAGGTCACCAGCGTGGTTCCCGAGAGCGCCCT
GCTCATCGTGCTGGGCCTGGTGCTGGGCGGCATCGTCTGGGCGGCCGACCACATCGCGTCCTTCACACTGACGCCCACCGTCTTCTTCTT
CTACCTGCTGCCCCCCATCGTGCTGGACGCCGGCTACTTCATGCCCAACCGCCTCTTCTTCGGCAACCTGGGGACCATCCTGTTGTACGC
CGTCGTGGGTACCGTGTGGAACGCGGCCACCACCGGGCTGTCCCTCTACGGCGTCTTCCTCAGTGGGCTCATGGGCGACCTGCAGATTGG
GCTGCTGGACTTCCTCCTGTTTGGCAGCCTCATGGCGGCTGTGGACCCGGTGGCCGTCCTGGCCGTGTTTGAGGAGGTCCATGTCAACGA
GGTCCTGTTCATCATCGTCTTCGGGGAGTCGCTGCTGAACGACGCAGTCACCGTGGCTGCAACAAGAAACAACAGAGCCCATGAAAACTG
ACAGTGCTGAAAGTGAAGACTGAGATTCAGGAGCTCAGGTGCCCCTGTGATCCAGGTCTTCTACCCTGAAACCCCACCCTCCATCAAGGT
CCTGCCTGTAGAGTCTACCTTGCAAAGCCTCCTGCTCCTACCCATGCTACAGGCCAGGAACCAGAGCCCATCATCTCAGAGGCCCCTGGA
TGTCCTTCGAAGGAACCAGGACCCTCAGAGCCCAGCATCCATCTCTGTCATCATCTTCATCACACCCAAAGAAGAGCCAGCCTTGCAGGA
GGGTTTACATCTCCAGGAAGATGGGCTGCCAGCAACTGCAGAGGATGCAGCCACCTGCTTAACTGTGCTGTCCAGCCAGCCAGCCAGCTG
CAGGGCCTCTTGCTGCTTAAGAGCTGATGGGCCGGGCATGTTGGCTCACACCTGTGAGCACAGTACTGGGAAATGGGAGCACAGTACTAG
GAAATGGGAGCACAGTACTGGGAAATGGGAGCACAGTACTGGGAAATGGGGGCTCACAGCACTGCAAAATGGGAGCACAGTATTGGGAAA
TGGGAGCACAGTACTGGGAAGTGGGAGCACAGTACTGAGAAGTGGGAGCACAGTACTGAGAAATGGGAGTACACTACTGAGAAATGGGAG
CACAGTACTGGGAAATGGGCATACAGTACTGAGAAATGGGAGCACACAGTACTGGGAAATGGGAGCACAGTACTGGGAAATGGGAGCACA
GTACTGGGAAATGGGAGCTCACAGTACTGGGAAATGGGAGCTCACAGTACTGGGAAATGGGAGCACAGTACTGTGAAATGGGAGCACAGT
ACTGGGAAATGGGAGCATAGTACTGAGAAACCCCAGACCTGGATTCTGAGTTTTTCAGTCTAGCCCAGACTTCTTATCTTAGTAGACAAA
AAGAGTCAATACCAGAGAACCAGAGGCATCCTCTGTATTTTAATGAACTCTGCGTTTTAGTCTGTTTAGTAGTCATATTTTAAAAGATAA

>83551_83551_1_SLC9A3-ZDHHC11_SLC9A3_chr5_488430_ENST00000264938_ZDHHC11_chr5_801279_ENST00000424784_length(amino acids)=258AA_BP=
MRFRSSGAPVIQVFYPETPPSIKVLPVESTLQSLLLLPMLQARNQSPSSQRPLDVLRRNQDPQSPASISVIIFITPKEEPALQEGLHLQE
DGLPATAEDAATCLTVLSSQPASCRASCCLRADGPGMLAHTCEHSTGKWEHSTRKWEHSTGKWEHSTGKWGLTALQNGSTVLGNGSTVLG

--------------------------------------------------------------
>83551_83551_2_SLC9A3-ZDHHC11_SLC9A3_chr5_488430_ENST00000514375_ZDHHC11_chr5_801279_ENST00000424784_length(transcript)=1744nt_BP=683nt
AGGCGGCAATGTGGGGACTCGGGGCCCGGGGCCCCGACCGGGGGCTGCTGCTGGCGCTGGCGCTGGGCGGGCTGGCGCGGGCCGGGGGCG
TCGAGGTGGAGCCCGGCGGCGCGCACGGCGAGAGCGGGGGCTTCCAGGTGGTCACCTTCGAGTGGGCCCACGTGCAGGATCCCTACGTCA
TCGCGCTCTGGATCCTCGTGGCCAGCTTGGCCAAGATCGGGTTCCACCTGTCCCACAAGGTCACCAGCGTGGTTCCCGAGAGCGCCCTGC
TCATCGTGCTGGGCCTGGTGCTGGGCGGCATCGTCTGGGCGGCCGACCACATCGCGTCCTTCACACTGACGCCCACCGTCTTCTTCTTCT
ACCTGCTGCCCCCCATCGTGCTGGACGCCGGCTACTTCATGCCCAACCGCCTCTTCTTCGGCAACCTGGGGACCATCCTGTTGTACGCCG
TCGTGGGTACCGTGTGGAACGCGGCCACCACCGGGCTGTCCCTCTACGGCGTCTTCCTCAGTGGGCTCATGGGCGACCTGCAGATTGGGC
TGCTGGACTTCCTCCTGTTTGGCAGCCTCATGGCGGCTGTGGACCCGGTGGCCGTCCTGGCCGTGTTTGAGGAGGTCCATGTCAACGAGG
TCCTGTTCATCATCGTCTTCGGGGAGTCGCTGCTGAACGACGCAGTCACCGTGGCTGCAACAAGAAACAACAGAGCCCATGAAAACTGAC
AGTGCTGAAAGTGAAGACTGAGATTCAGGAGCTCAGGTGCCCCTGTGATCCAGGTCTTCTACCCTGAAACCCCACCCTCCATCAAGGTCC
TGCCTGTAGAGTCTACCTTGCAAAGCCTCCTGCTCCTACCCATGCTACAGGCCAGGAACCAGAGCCCATCATCTCAGAGGCCCCTGGATG
TCCTTCGAAGGAACCAGGACCCTCAGAGCCCAGCATCCATCTCTGTCATCATCTTCATCACACCCAAAGAAGAGCCAGCCTTGCAGGAGG
GTTTACATCTCCAGGAAGATGGGCTGCCAGCAACTGCAGAGGATGCAGCCACCTGCTTAACTGTGCTGTCCAGCCAGCCAGCCAGCTGCA
GGGCCTCTTGCTGCTTAAGAGCTGATGGGCCGGGCATGTTGGCTCACACCTGTGAGCACAGTACTGGGAAATGGGAGCACAGTACTAGGA
AATGGGAGCACAGTACTGGGAAATGGGAGCACAGTACTGGGAAATGGGGGCTCACAGCACTGCAAAATGGGAGCACAGTATTGGGAAATG
GGAGCACAGTACTGGGAAGTGGGAGCACAGTACTGAGAAGTGGGAGCACAGTACTGAGAAATGGGAGTACACTACTGAGAAATGGGAGCA
CAGTACTGGGAAATGGGCATACAGTACTGAGAAATGGGAGCACACAGTACTGGGAAATGGGAGCACAGTACTGGGAAATGGGAGCACAGT
ACTGGGAAATGGGAGCTCACAGTACTGGGAAATGGGAGCTCACAGTACTGGGAAATGGGAGCACAGTACTGTGAAATGGGAGCACAGTAC
TGGGAAATGGGAGCATAGTACTGAGAAACCCCAGACCTGGATTCTGAGTTTTTCAGTCTAGCCCAGACTTCTTATCTTAGTAGACAAAAA
GAGTCAATACCAGAGAACCAGAGGCATCCTCTGTATTTTAATGAACTCTGCGTTTTAGTCTGTTTAGTAGTCATATTTTAAAAGATAATC

>83551_83551_2_SLC9A3-ZDHHC11_SLC9A3_chr5_488430_ENST00000514375_ZDHHC11_chr5_801279_ENST00000424784_length(amino acids)=258AA_BP=
MRFRSSGAPVIQVFYPETPPSIKVLPVESTLQSLLLLPMLQARNQSPSSQRPLDVLRRNQDPQSPASISVIIFITPKEEPALQEGLHLQE
DGLPATAEDAATCLTVLSSQPASCRASCCLRADGPGMLAHTCEHSTGKWEHSTRKWEHSTGKWEHSTGKWGLTALQNGSTVLGNGSTVLG

--------------------------------------------------------------
>83551_83551_3_SLC9A3-ZDHHC11_SLC9A3_chr5_488431_ENST00000264938_ZDHHC11_chr5_801279_ENST00000424784_length(transcript)=1746nt_BP=685nt
GCAGGCGGCAATGTGGGGACTCGGGGCCCGGGGCCCCGACCGGGGGCTGCTGCTGGCGCTGGCGCTGGGCGGGCTGGCGCGGGCCGGGGG
CGTCGAGGTGGAGCCCGGCGGCGCGCACGGCGAGAGCGGGGGCTTCCAGGTGGTCACCTTCGAGTGGGCCCACGTGCAGGATCCCTACGT
CATCGCGCTCTGGATCCTCGTGGCCAGCTTGGCCAAGATCGGGTTCCACCTGTCCCACAAGGTCACCAGCGTGGTTCCCGAGAGCGCCCT
GCTCATCGTGCTGGGCCTGGTGCTGGGCGGCATCGTCTGGGCGGCCGACCACATCGCGTCCTTCACACTGACGCCCACCGTCTTCTTCTT
CTACCTGCTGCCCCCCATCGTGCTGGACGCCGGCTACTTCATGCCCAACCGCCTCTTCTTCGGCAACCTGGGGACCATCCTGTTGTACGC
CGTCGTGGGTACCGTGTGGAACGCGGCCACCACCGGGCTGTCCCTCTACGGCGTCTTCCTCAGTGGGCTCATGGGCGACCTGCAGATTGG
GCTGCTGGACTTCCTCCTGTTTGGCAGCCTCATGGCGGCTGTGGACCCGGTGGCCGTCCTGGCCGTGTTTGAGGAGGTCCATGTCAACGA
GGTCCTGTTCATCATCGTCTTCGGGGAGTCGCTGCTGAACGACGCAGTCACCGTGGCTGCAACAAGAAACAACAGAGCCCATGAAAACTG
ACAGTGCTGAAAGTGAAGACTGAGATTCAGGAGCTCAGGTGCCCCTGTGATCCAGGTCTTCTACCCTGAAACCCCACCCTCCATCAAGGT
CCTGCCTGTAGAGTCTACCTTGCAAAGCCTCCTGCTCCTACCCATGCTACAGGCCAGGAACCAGAGCCCATCATCTCAGAGGCCCCTGGA
TGTCCTTCGAAGGAACCAGGACCCTCAGAGCCCAGCATCCATCTCTGTCATCATCTTCATCACACCCAAAGAAGAGCCAGCCTTGCAGGA
GGGTTTACATCTCCAGGAAGATGGGCTGCCAGCAACTGCAGAGGATGCAGCCACCTGCTTAACTGTGCTGTCCAGCCAGCCAGCCAGCTG
CAGGGCCTCTTGCTGCTTAAGAGCTGATGGGCCGGGCATGTTGGCTCACACCTGTGAGCACAGTACTGGGAAATGGGAGCACAGTACTAG
GAAATGGGAGCACAGTACTGGGAAATGGGAGCACAGTACTGGGAAATGGGGGCTCACAGCACTGCAAAATGGGAGCACAGTATTGGGAAA
TGGGAGCACAGTACTGGGAAGTGGGAGCACAGTACTGAGAAGTGGGAGCACAGTACTGAGAAATGGGAGTACACTACTGAGAAATGGGAG
CACAGTACTGGGAAATGGGCATACAGTACTGAGAAATGGGAGCACACAGTACTGGGAAATGGGAGCACAGTACTGGGAAATGGGAGCACA
GTACTGGGAAATGGGAGCTCACAGTACTGGGAAATGGGAGCTCACAGTACTGGGAAATGGGAGCACAGTACTGTGAAATGGGAGCACAGT
ACTGGGAAATGGGAGCATAGTACTGAGAAACCCCAGACCTGGATTCTGAGTTTTTCAGTCTAGCCCAGACTTCTTATCTTAGTAGACAAA
AAGAGTCAATACCAGAGAACCAGAGGCATCCTCTGTATTTTAATGAACTCTGCGTTTTAGTCTGTTTAGTAGTCATATTTTAAAAGATAA

>83551_83551_3_SLC9A3-ZDHHC11_SLC9A3_chr5_488431_ENST00000264938_ZDHHC11_chr5_801279_ENST00000424784_length(amino acids)=258AA_BP=
MRFRSSGAPVIQVFYPETPPSIKVLPVESTLQSLLLLPMLQARNQSPSSQRPLDVLRRNQDPQSPASISVIIFITPKEEPALQEGLHLQE
DGLPATAEDAATCLTVLSSQPASCRASCCLRADGPGMLAHTCEHSTGKWEHSTRKWEHSTGKWEHSTGKWGLTALQNGSTVLGNGSTVLG

--------------------------------------------------------------
>83551_83551_4_SLC9A3-ZDHHC11_SLC9A3_chr5_488431_ENST00000514375_ZDHHC11_chr5_801279_ENST00000424784_length(transcript)=1744nt_BP=683nt
AGGCGGCAATGTGGGGACTCGGGGCCCGGGGCCCCGACCGGGGGCTGCTGCTGGCGCTGGCGCTGGGCGGGCTGGCGCGGGCCGGGGGCG
TCGAGGTGGAGCCCGGCGGCGCGCACGGCGAGAGCGGGGGCTTCCAGGTGGTCACCTTCGAGTGGGCCCACGTGCAGGATCCCTACGTCA
TCGCGCTCTGGATCCTCGTGGCCAGCTTGGCCAAGATCGGGTTCCACCTGTCCCACAAGGTCACCAGCGTGGTTCCCGAGAGCGCCCTGC
TCATCGTGCTGGGCCTGGTGCTGGGCGGCATCGTCTGGGCGGCCGACCACATCGCGTCCTTCACACTGACGCCCACCGTCTTCTTCTTCT
ACCTGCTGCCCCCCATCGTGCTGGACGCCGGCTACTTCATGCCCAACCGCCTCTTCTTCGGCAACCTGGGGACCATCCTGTTGTACGCCG
TCGTGGGTACCGTGTGGAACGCGGCCACCACCGGGCTGTCCCTCTACGGCGTCTTCCTCAGTGGGCTCATGGGCGACCTGCAGATTGGGC
TGCTGGACTTCCTCCTGTTTGGCAGCCTCATGGCGGCTGTGGACCCGGTGGCCGTCCTGGCCGTGTTTGAGGAGGTCCATGTCAACGAGG
TCCTGTTCATCATCGTCTTCGGGGAGTCGCTGCTGAACGACGCAGTCACCGTGGCTGCAACAAGAAACAACAGAGCCCATGAAAACTGAC
AGTGCTGAAAGTGAAGACTGAGATTCAGGAGCTCAGGTGCCCCTGTGATCCAGGTCTTCTACCCTGAAACCCCACCCTCCATCAAGGTCC
TGCCTGTAGAGTCTACCTTGCAAAGCCTCCTGCTCCTACCCATGCTACAGGCCAGGAACCAGAGCCCATCATCTCAGAGGCCCCTGGATG
TCCTTCGAAGGAACCAGGACCCTCAGAGCCCAGCATCCATCTCTGTCATCATCTTCATCACACCCAAAGAAGAGCCAGCCTTGCAGGAGG
GTTTACATCTCCAGGAAGATGGGCTGCCAGCAACTGCAGAGGATGCAGCCACCTGCTTAACTGTGCTGTCCAGCCAGCCAGCCAGCTGCA
GGGCCTCTTGCTGCTTAAGAGCTGATGGGCCGGGCATGTTGGCTCACACCTGTGAGCACAGTACTGGGAAATGGGAGCACAGTACTAGGA
AATGGGAGCACAGTACTGGGAAATGGGAGCACAGTACTGGGAAATGGGGGCTCACAGCACTGCAAAATGGGAGCACAGTATTGGGAAATG
GGAGCACAGTACTGGGAAGTGGGAGCACAGTACTGAGAAGTGGGAGCACAGTACTGAGAAATGGGAGTACACTACTGAGAAATGGGAGCA
CAGTACTGGGAAATGGGCATACAGTACTGAGAAATGGGAGCACACAGTACTGGGAAATGGGAGCACAGTACTGGGAAATGGGAGCACAGT
ACTGGGAAATGGGAGCTCACAGTACTGGGAAATGGGAGCTCACAGTACTGGGAAATGGGAGCACAGTACTGTGAAATGGGAGCACAGTAC
TGGGAAATGGGAGCATAGTACTGAGAAACCCCAGACCTGGATTCTGAGTTTTTCAGTCTAGCCCAGACTTCTTATCTTAGTAGACAAAAA
GAGTCAATACCAGAGAACCAGAGGCATCCTCTGTATTTTAATGAACTCTGCGTTTTAGTCTGTTTAGTAGTCATATTTTAAAAGATAATC

>83551_83551_4_SLC9A3-ZDHHC11_SLC9A3_chr5_488431_ENST00000514375_ZDHHC11_chr5_801279_ENST00000424784_length(amino acids)=258AA_BP=
MRFRSSGAPVIQVFYPETPPSIKVLPVESTLQSLLLLPMLQARNQSPSSQRPLDVLRRNQDPQSPASISVIIFITPKEEPALQEGLHLQE
DGLPATAEDAATCLTVLSSQPASCRASCCLRADGPGMLAHTCEHSTGKWEHSTRKWEHSTGKWEHSTGKWGLTALQNGSTVLGNGSTVLG

--------------------------------------------------------------
>83551_83551_5_SLC9A3-ZDHHC11_SLC9A3_chr5_524227_ENST00000264938_ZDHHC11_chr5_801279_ENST00000424784_length(transcript)=1282nt_BP=221nt
GCAGGCGGCAATGTGGGGACTCGGGGCCCGGGGCCCCGACCGGGGGCTGCTGCTGGCGCTGGCGCTGGGCGGGCTGGCGCGGGCCGGGGG
CGTCGAGGTGGAGCCCGGCGGCGCGCACGGCGAGAGCGGGGGCTTCCAGGTGGTCACCTTCGAGTGGGCCCACGTGCAGGATCCCTACGT
CATCGCGCTCTGGATCCTCGTGGCCAGCTTGGCCAAGATCGGCTGCAACAAGAAACAACAGAGCCCATGAAAACTGACAGTGCTGAAAGT
GAAGACTGAGATTCAGGAGCTCAGGTGCCCCTGTGATCCAGGTCTTCTACCCTGAAACCCCACCCTCCATCAAGGTCCTGCCTGTAGAGT
CTACCTTGCAAAGCCTCCTGCTCCTACCCATGCTACAGGCCAGGAACCAGAGCCCATCATCTCAGAGGCCCCTGGATGTCCTTCGAAGGA
ACCAGGACCCTCAGAGCCCAGCATCCATCTCTGTCATCATCTTCATCACACCCAAAGAAGAGCCAGCCTTGCAGGAGGGTTTACATCTCC
AGGAAGATGGGCTGCCAGCAACTGCAGAGGATGCAGCCACCTGCTTAACTGTGCTGTCCAGCCAGCCAGCCAGCTGCAGGGCCTCTTGCT
GCTTAAGAGCTGATGGGCCGGGCATGTTGGCTCACACCTGTGAGCACAGTACTGGGAAATGGGAGCACAGTACTAGGAAATGGGAGCACA
GTACTGGGAAATGGGAGCACAGTACTGGGAAATGGGGGCTCACAGCACTGCAAAATGGGAGCACAGTATTGGGAAATGGGAGCACAGTAC
TGGGAAGTGGGAGCACAGTACTGAGAAGTGGGAGCACAGTACTGAGAAATGGGAGTACACTACTGAGAAATGGGAGCACAGTACTGGGAA
ATGGGCATACAGTACTGAGAAATGGGAGCACACAGTACTGGGAAATGGGAGCACAGTACTGGGAAATGGGAGCACAGTACTGGGAAATGG
GAGCTCACAGTACTGGGAAATGGGAGCTCACAGTACTGGGAAATGGGAGCACAGTACTGTGAAATGGGAGCACAGTACTGGGAAATGGGA
GCATAGTACTGAGAAACCCCAGACCTGGATTCTGAGTTTTTCAGTCTAGCCCAGACTTCTTATCTTAGTAGACAAAAAGAGTCAATACCA
GAGAACCAGAGGCATCCTCTGTATTTTAATGAACTCTGCGTTTTAGTCTGTTTAGTAGTCATATTTTAAAAGATAATCAGTTTTCTAAAT

>83551_83551_5_SLC9A3-ZDHHC11_SLC9A3_chr5_524227_ENST00000264938_ZDHHC11_chr5_801279_ENST00000424784_length(amino acids)=258AA_BP=
MRFRSSGAPVIQVFYPETPPSIKVLPVESTLQSLLLLPMLQARNQSPSSQRPLDVLRRNQDPQSPASISVIIFITPKEEPALQEGLHLQE
DGLPATAEDAATCLTVLSSQPASCRASCCLRADGPGMLAHTCEHSTGKWEHSTRKWEHSTGKWEHSTGKWGLTALQNGSTVLGNGSTVLG

--------------------------------------------------------------
>83551_83551_6_SLC9A3-ZDHHC11_SLC9A3_chr5_524227_ENST00000514375_ZDHHC11_chr5_801279_ENST00000424784_length(transcript)=1280nt_BP=219nt
AGGCGGCAATGTGGGGACTCGGGGCCCGGGGCCCCGACCGGGGGCTGCTGCTGGCGCTGGCGCTGGGCGGGCTGGCGCGGGCCGGGGGCG
TCGAGGTGGAGCCCGGCGGCGCGCACGGCGAGAGCGGGGGCTTCCAGGTGGTCACCTTCGAGTGGGCCCACGTGCAGGATCCCTACGTCA
TCGCGCTCTGGATCCTCGTGGCCAGCTTGGCCAAGATCGGCTGCAACAAGAAACAACAGAGCCCATGAAAACTGACAGTGCTGAAAGTGA
AGACTGAGATTCAGGAGCTCAGGTGCCCCTGTGATCCAGGTCTTCTACCCTGAAACCCCACCCTCCATCAAGGTCCTGCCTGTAGAGTCT
ACCTTGCAAAGCCTCCTGCTCCTACCCATGCTACAGGCCAGGAACCAGAGCCCATCATCTCAGAGGCCCCTGGATGTCCTTCGAAGGAAC
CAGGACCCTCAGAGCCCAGCATCCATCTCTGTCATCATCTTCATCACACCCAAAGAAGAGCCAGCCTTGCAGGAGGGTTTACATCTCCAG
GAAGATGGGCTGCCAGCAACTGCAGAGGATGCAGCCACCTGCTTAACTGTGCTGTCCAGCCAGCCAGCCAGCTGCAGGGCCTCTTGCTGC
TTAAGAGCTGATGGGCCGGGCATGTTGGCTCACACCTGTGAGCACAGTACTGGGAAATGGGAGCACAGTACTAGGAAATGGGAGCACAGT
ACTGGGAAATGGGAGCACAGTACTGGGAAATGGGGGCTCACAGCACTGCAAAATGGGAGCACAGTATTGGGAAATGGGAGCACAGTACTG
GGAAGTGGGAGCACAGTACTGAGAAGTGGGAGCACAGTACTGAGAAATGGGAGTACACTACTGAGAAATGGGAGCACAGTACTGGGAAAT
GGGCATACAGTACTGAGAAATGGGAGCACACAGTACTGGGAAATGGGAGCACAGTACTGGGAAATGGGAGCACAGTACTGGGAAATGGGA
GCTCACAGTACTGGGAAATGGGAGCTCACAGTACTGGGAAATGGGAGCACAGTACTGTGAAATGGGAGCACAGTACTGGGAAATGGGAGC
ATAGTACTGAGAAACCCCAGACCTGGATTCTGAGTTTTTCAGTCTAGCCCAGACTTCTTATCTTAGTAGACAAAAAGAGTCAATACCAGA
GAACCAGAGGCATCCTCTGTATTTTAATGAACTCTGCGTTTTAGTCTGTTTAGTAGTCATATTTTAAAAGATAATCAGTTTTCTAAATAT

>83551_83551_6_SLC9A3-ZDHHC11_SLC9A3_chr5_524227_ENST00000514375_ZDHHC11_chr5_801279_ENST00000424784_length(amino acids)=258AA_BP=
MRFRSSGAPVIQVFYPETPPSIKVLPVESTLQSLLLLPMLQARNQSPSSQRPLDVLRRNQDPQSPASISVIIFITPKEEPALQEGLHLQE
DGLPATAEDAATCLTVLSSQPASCRASCCLRADGPGMLAHTCEHSTGKWEHSTRKWEHSTGKWEHSTGKWGLTALQNGSTVLGNGSTVLG

--------------------------------------------------------------

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Fusion Gene PPI Analysis for SLC9A3-ZDHHC11


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with
HgeneSLC9A3chr5:488430chr5:801279ENST00000264938-317590_667225.0835.0PDZD3
HgeneSLC9A3chr5:488431chr5:801279ENST00000264938-317590_667225.0835.0PDZD3
HgeneSLC9A3chr5:524227chr5:801279ENST00000264938-117590_66770.33333333333333835.0PDZD3


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for SLC9A3-ZDHHC11


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for SLC9A3-ZDHHC11


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource