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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:SMARCC1-ITGB4 (FusionGDB2 ID:83942) |
Fusion Gene Summary for SMARCC1-ITGB4 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: SMARCC1-ITGB4 | Fusion gene ID: 83942 | Hgene | Tgene | Gene symbol | SMARCC1 | ITGB4 | Gene ID | 6599 | 3691 |
| Gene name | SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 | integrin subunit beta 4 | |
| Synonyms | BAF155|CRACC1|Rsc8|SRG3|SWI3 | CD104|GP150 | |
| Cytomap | 3p21.31 | 17q25.1 | |
| Type of gene | protein-coding | protein-coding | |
| Description | SWI/SNF complex subunit SMARCC1BRG1-associated factor 155SWI/SNF complex 155 kDa subunitSWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 1chromatin remodeling complex BAF155 subunitmammalian chromatin remode | integrin beta-4CD104 antigen | |
| Modification date | 20200313 | 20200329 | |
| UniProtAcc | . | P16144 | |
| Ensembl transtripts involved in fusion gene | ENST00000254480, ENST00000425518, | ENST00000584558, ENST00000200181, ENST00000339591, ENST00000449880, ENST00000450894, ENST00000579662, | |
| Fusion gene scores | * DoF score | 19 X 26 X 11=5434 | 8 X 8 X 7=448 |
| # samples | 37 | 9 | |
| ** MAII score | log2(37/5434*10)=-3.87641738970566 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(9/448*10)=-2.31550182572793 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: SMARCC1 [Title/Abstract] AND ITGB4 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | SMARCC1(47676680)-ITGB4(73744922), # samples:2 | ||
| Anticipated loss of major functional domain due to fusion event. | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | SMARCC1 | GO:0006337 | nucleosome disassembly | 8895581 |
| Hgene | SMARCC1 | GO:0006338 | chromatin remodeling | 10078207|11018012|11726552 |
| Hgene | SMARCC1 | GO:0045893 | positive regulation of transcription, DNA-templated | 11018012 |
| Tgene | ITGB4 | GO:0009611 | response to wounding | 19403692 |
| Tgene | ITGB4 | GO:0031581 | hemidesmosome assembly | 12482924 |
| Fusion gene breakpoints across SMARCC1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene breakpoints across ITGB4 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | GBM | TCGA-27-2526-01A | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + |
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Fusion Gene ORF analysis for SMARCC1-ITGB4 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 5CDS-intron | ENST00000254480 | ENST00000584558 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + |
| 5UTR-3CDS | ENST00000425518 | ENST00000200181 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + |
| 5UTR-3CDS | ENST00000425518 | ENST00000339591 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + |
| 5UTR-3CDS | ENST00000425518 | ENST00000449880 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + |
| 5UTR-3CDS | ENST00000425518 | ENST00000450894 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + |
| 5UTR-3CDS | ENST00000425518 | ENST00000579662 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + |
| 5UTR-intron | ENST00000425518 | ENST00000584558 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + |
| In-frame | ENST00000254480 | ENST00000200181 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + |
| In-frame | ENST00000254480 | ENST00000339591 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + |
| In-frame | ENST00000254480 | ENST00000449880 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + |
| In-frame | ENST00000254480 | ENST00000450894 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + |
| In-frame | ENST00000254480 | ENST00000579662 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000254480 | SMARCC1 | chr3 | 47676680 | - | ENST00000579662 | ITGB4 | chr17 | 73744922 | + | 4963 | 2766 | 96 | 4913 | 1605 |
| ENST00000254480 | SMARCC1 | chr3 | 47676680 | - | ENST00000339591 | ITGB4 | chr17 | 73744922 | + | 5335 | 2766 | 96 | 5072 | 1658 |
| ENST00000254480 | SMARCC1 | chr3 | 47676680 | - | ENST00000200181 | ITGB4 | chr17 | 73744922 | + | 5387 | 2766 | 96 | 5123 | 1675 |
| ENST00000254480 | SMARCC1 | chr3 | 47676680 | - | ENST00000450894 | ITGB4 | chr17 | 73744922 | + | 5174 | 2766 | 96 | 4913 | 1605 |
| ENST00000254480 | SMARCC1 | chr3 | 47676680 | - | ENST00000449880 | ITGB4 | chr17 | 73744922 | + | 5336 | 2766 | 96 | 5072 | 1658 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000254480 | ENST00000579662 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + | 0.001522448 | 0.9984775 |
| ENST00000254480 | ENST00000339591 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + | 0.001457588 | 0.9985424 |
| ENST00000254480 | ENST00000200181 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + | 0.001938111 | 0.99806184 |
| ENST00000254480 | ENST00000450894 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + | 0.001496197 | 0.9985038 |
| ENST00000254480 | ENST00000449880 | SMARCC1 | chr3 | 47676680 | - | ITGB4 | chr17 | 73744922 | + | 0.001462469 | 0.99853754 |
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Fusion Genomic Features for SMARCC1-ITGB4 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| SMARCC1 | chr3 | 47676679 | - | ITGB4 | chr17 | 73744921 | + | 2.18E-10 | 1 |
| SMARCC1 | chr3 | 47676679 | - | ITGB4 | chr17 | 73744921 | + | 2.18E-10 | 1 |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
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| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for SMARCC1-ITGB4 |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr3:47676680/chr17:73744922) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | ITGB4 |
| FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Integrin alpha-6/beta-4 is a receptor for laminin. Plays a critical structural role in the hemidesmosome of epithelial cells. Is required for the regulation of keratinocyte polarity and motility. ITGA6:ITGB4 binds to NRG1 (via EGF domain) and this binding is essential for NRG1-ERBB signaling (PubMed:20682778). ITGA6:ITGB4 binds to IGF1 and this binding is essential for IGF1 signaling (PubMed:22351760). ITGA6:ITGB4 binds to IGF2 and this binding is essential for IGF2 signaling (PubMed:28873464). {ECO:0000269|PubMed:12482924, ECO:0000269|PubMed:19403692, ECO:0000269|PubMed:20682778, ECO:0000269|PubMed:22351760, ECO:0000269|PubMed:28873464}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | SMARCC1 | chr3:47676680 | chr17:73744922 | ENST00000254480 | - | 24 | 28 | 329_336 | 882 | 1106.0 | Compositional bias | Note=Poly-Pro |
| Hgene | SMARCC1 | chr3:47676680 | chr17:73744922 | ENST00000254480 | - | 24 | 28 | 769_863 | 882 | 1106.0 | Compositional bias | Note=Glu-rich |
| Hgene | SMARCC1 | chr3:47676680 | chr17:73744922 | ENST00000254480 | - | 24 | 28 | 867_878 | 882 | 1106.0 | Compositional bias | Note=Poly-Ala |
| Hgene | SMARCC1 | chr3:47676680 | chr17:73744922 | ENST00000254480 | - | 24 | 28 | 449_546 | 882 | 1106.0 | Domain | SWIRM |
| Hgene | SMARCC1 | chr3:47676680 | chr17:73744922 | ENST00000254480 | - | 24 | 28 | 618_669 | 882 | 1106.0 | Domain | SANT |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 1129_1218 | 1037 | 1823.0 | Domain | Fibronectin type-III 1 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 1222_1321 | 1037 | 1823.0 | Domain | Fibronectin type-III 2 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 1530_1625 | 1037 | 1823.0 | Domain | Fibronectin type-III 3 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 1643_1739 | 1037 | 1823.0 | Domain | Fibronectin type-III 4 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 1129_1218 | 1037 | 1806.0 | Domain | Fibronectin type-III 1 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 1222_1321 | 1037 | 1806.0 | Domain | Fibronectin type-III 2 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 1530_1625 | 1037 | 1806.0 | Domain | Fibronectin type-III 3 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 1643_1739 | 1037 | 1806.0 | Domain | Fibronectin type-III 4 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 1129_1218 | 1037 | 1806.0 | Domain | Fibronectin type-III 1 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 1222_1321 | 1037 | 1806.0 | Domain | Fibronectin type-III 2 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 1530_1625 | 1037 | 1806.0 | Domain | Fibronectin type-III 3 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 1643_1739 | 1037 | 1806.0 | Domain | Fibronectin type-III 4 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 1129_1218 | 1037 | 1753.0 | Domain | Fibronectin type-III 1 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 1222_1321 | 1037 | 1753.0 | Domain | Fibronectin type-III 2 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 1530_1625 | 1037 | 1753.0 | Domain | Fibronectin type-III 3 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 1643_1739 | 1037 | 1753.0 | Domain | Fibronectin type-III 4 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 1129_1218 | 1037 | 1753.0 | Domain | Fibronectin type-III 1 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 1222_1321 | 1037 | 1753.0 | Domain | Fibronectin type-III 2 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 1530_1625 | 1037 | 1753.0 | Domain | Fibronectin type-III 3 | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 1643_1739 | 1037 | 1753.0 | Domain | Fibronectin type-III 4 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | SMARCC1 | chr3:47676680 | chr17:73744922 | ENST00000254480 | - | 24 | 28 | 914_946 | 882 | 1106.0 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | SMARCC1 | chr3:47676680 | chr17:73744922 | ENST00000254480 | - | 24 | 28 | 977_1105 | 882 | 1106.0 | Compositional bias | Note=Pro-rich |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 131_329 | 1037 | 1823.0 | Domain | Note=VWFA | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 29_73 | 1037 | 1823.0 | Domain | Note=PSI | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 979_1084 | 1037 | 1823.0 | Domain | Note=Calx-beta | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 131_329 | 1037 | 1806.0 | Domain | Note=VWFA | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 29_73 | 1037 | 1806.0 | Domain | Note=PSI | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 979_1084 | 1037 | 1806.0 | Domain | Note=Calx-beta | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 131_329 | 1037 | 1806.0 | Domain | Note=VWFA | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 29_73 | 1037 | 1806.0 | Domain | Note=PSI | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 979_1084 | 1037 | 1806.0 | Domain | Note=Calx-beta | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 131_329 | 1037 | 1753.0 | Domain | Note=VWFA | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 29_73 | 1037 | 1753.0 | Domain | Note=PSI | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 979_1084 | 1037 | 1753.0 | Domain | Note=Calx-beta | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 131_329 | 1037 | 1753.0 | Domain | Note=VWFA | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 29_73 | 1037 | 1753.0 | Domain | Note=PSI | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 979_1084 | 1037 | 1753.0 | Domain | Note=Calx-beta | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 194_199 | 1037 | 1823.0 | Region | Involved in NRG1- and IGF1-binding | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 456_619 | 1037 | 1823.0 | Region | Note=Cysteine-rich tandem repeats | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 732_749 | 1037 | 1823.0 | Region | Note=Palmitoylated on several cysteines | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 194_199 | 1037 | 1806.0 | Region | Involved in NRG1- and IGF1-binding | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 456_619 | 1037 | 1806.0 | Region | Note=Cysteine-rich tandem repeats | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 732_749 | 1037 | 1806.0 | Region | Note=Palmitoylated on several cysteines | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 194_199 | 1037 | 1806.0 | Region | Involved in NRG1- and IGF1-binding | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 456_619 | 1037 | 1806.0 | Region | Note=Cysteine-rich tandem repeats | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 732_749 | 1037 | 1806.0 | Region | Note=Palmitoylated on several cysteines | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 194_199 | 1037 | 1753.0 | Region | Involved in NRG1- and IGF1-binding | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 456_619 | 1037 | 1753.0 | Region | Note=Cysteine-rich tandem repeats | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 732_749 | 1037 | 1753.0 | Region | Note=Palmitoylated on several cysteines | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 194_199 | 1037 | 1753.0 | Region | Involved in NRG1- and IGF1-binding | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 456_619 | 1037 | 1753.0 | Region | Note=Cysteine-rich tandem repeats | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 732_749 | 1037 | 1753.0 | Region | Note=Palmitoylated on several cysteines | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 456_502 | 1037 | 1823.0 | Repeat | Note=I | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 503_542 | 1037 | 1823.0 | Repeat | Note=II | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 543_581 | 1037 | 1823.0 | Repeat | Note=III | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 582_619 | 1037 | 1823.0 | Repeat | Note=IV | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 456_502 | 1037 | 1806.0 | Repeat | Note=I | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 503_542 | 1037 | 1806.0 | Repeat | Note=II | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 543_581 | 1037 | 1806.0 | Repeat | Note=III | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 582_619 | 1037 | 1806.0 | Repeat | Note=IV | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 456_502 | 1037 | 1806.0 | Repeat | Note=I | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 503_542 | 1037 | 1806.0 | Repeat | Note=II | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 543_581 | 1037 | 1806.0 | Repeat | Note=III | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 582_619 | 1037 | 1806.0 | Repeat | Note=IV | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 456_502 | 1037 | 1753.0 | Repeat | Note=I | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 503_542 | 1037 | 1753.0 | Repeat | Note=II | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 543_581 | 1037 | 1753.0 | Repeat | Note=III | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 582_619 | 1037 | 1753.0 | Repeat | Note=IV | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 456_502 | 1037 | 1753.0 | Repeat | Note=I | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 503_542 | 1037 | 1753.0 | Repeat | Note=II | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 543_581 | 1037 | 1753.0 | Repeat | Note=III | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 582_619 | 1037 | 1753.0 | Repeat | Note=IV | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 28_710 | 1037 | 1823.0 | Topological domain | Extracellular | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 734_1822 | 1037 | 1823.0 | Topological domain | Cytoplasmic | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 28_710 | 1037 | 1806.0 | Topological domain | Extracellular | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 734_1822 | 1037 | 1806.0 | Topological domain | Cytoplasmic | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 28_710 | 1037 | 1806.0 | Topological domain | Extracellular | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 734_1822 | 1037 | 1806.0 | Topological domain | Cytoplasmic | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 28_710 | 1037 | 1753.0 | Topological domain | Extracellular | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 734_1822 | 1037 | 1753.0 | Topological domain | Cytoplasmic | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 28_710 | 1037 | 1753.0 | Topological domain | Extracellular | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 734_1822 | 1037 | 1753.0 | Topological domain | Cytoplasmic | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000200181 | 25 | 40 | 711_733 | 1037 | 1823.0 | Transmembrane | Helical | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000339591 | 25 | 40 | 711_733 | 1037 | 1806.0 | Transmembrane | Helical | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000449880 | 24 | 39 | 711_733 | 1037 | 1806.0 | Transmembrane | Helical | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000450894 | 25 | 39 | 711_733 | 1037 | 1753.0 | Transmembrane | Helical | |
| Tgene | ITGB4 | chr3:47676680 | chr17:73744922 | ENST00000579662 | 25 | 39 | 711_733 | 1037 | 1753.0 | Transmembrane | Helical |
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Fusion Gene Sequence for SMARCC1-ITGB4 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >83942_83942_1_SMARCC1-ITGB4_SMARCC1_chr3_47676680_ENST00000254480_ITGB4_chr17_73744922_ENST00000200181_length(transcript)=5387nt_BP=2766nt GGCTGGGCGGGGCCGGGAAGCGGCAGTGGCGGCTACGCGCGCGGGGGTGCGCGCGGGAACGACCGGGAAACACCGCGAGGGCCGGGGTGG GCCAGGCTGTGGGGACGACGGGCTGCGACGATGGCCGCAGCGGCGGGCGGCGGCGGGCCGGGGACAGCGGTAGGCGCCACGGGCTCGGGG ATTGCGGCGGCAGCCGCAGGCCTAGCTGTTTATCGACGGAAGGATGGGGGCCCGGCCACCAAGTTTTGGGAGAGCCCGGAGACGGTGTCC CAGCTGGATTCGGTGCGGGTCTGGCTGGGCAAGCACTACAAGAAGTATGTTCATGCGGATGCTCCTACCAATAAAACACTGGCTGGGCTG GTGGTGCAGCTTCTTCAGTTCCAGGAAGATGCCTTTGGGAAGCATGTCACCAACCCGGCCTTCACCAAACTCCCTGCAAAGTGTTTCATG GATTTCAAAGCTGGAGGCGCCTTATGTCACATTCTTGGGGCTGCTTACAAGTATAAAAATGAACAGGGATGGCGGAGGTTTGACCTACAG AACCCATCTCGAATGGATCGTAATGTGGAAATGTTTATGAACATTGAAAAAACATTGGTGCAGAACAATTGTTTGACCAGACCCAACATC TACCTCATTCCAGACATTGATCTGAAGTTGGCTAACAAATTGAAAGATATCATCAAACGACATCAGGGAACATTTACGGATGAGAAGTCA AAAGCTTCCCACCACATTTACCCATATTCTTCCTCACAAGACGATGAAGAATGGTTGAGACCGGTGATGAGAAAAGAGAAGCAAGTGTTA GTGCATTGGGGCTTTTACCCAGACAGCTATGATACTTGGGTCCATAGTAATGATGTTGATGCTGAAATTGAAGATCCACCAATTCCAGAA AAACCATGGAAGGTTCATGTGAAATGGATTTTGGACACTGATATTTTCAATGAATGGATGAATGAGGAGGATTATGAGGTGGATGAAAAT AGGAAGCCTGTGAGTTTTCGTCAGCGGATTTCAACCAAGAATGAAGAGCCAGTCAGAAGTCCAGAAAGAAGAGATAGAAAAGCATCAGCT AATGCTCGAAAGAGGAAACATTCGCCTTCGCCTCCCCCTCCGACACCAACAGAATCACGGAAGAAGAGTGGGAAGAAAGGCCAAGCTAGC CTTTATGGGAAGCGCAGAAGTCAGAAAGAGGAAGATGAGCAAGAAGATCTAACCAAGGATATGGAAGACCCAACACCTGTACCCAATATA GAAGAAGTAGTACTTCCCAAAAATGTGAACCTAAAGAAAGATAGTGAAAATACACCTGTTAAAGGAGGAACTGTAGCGGATCTAGATGAG CAGGATGAAGAAACAGTCACAGCAGGAGGAAAGGAAGATGAAGATCCTGCCAAAGGTGATCAGAGTCGATCAGTTGACCTTGGGGAAGAT AATGTGACAGAGCAGACCAATCACATTATTATTCCTAGTTATGCATCATGGTTTGATTATAACTGTATTCATGTGATTGAACGGCGTGCT CTTCCTGAGTTCTTCAATGGAAAAAACAAATCCAAGACTCCAGAAATATACTTGGCATATCGAAATTTTATGATTGACACGTATCGTCTA AACCCCCAAGAGTATTTAACTAGCACTGCTTGTCGGAGGAACTTGACTGGAGATGTGTGTGCTGTGATGAGGGTCCATGCCTTTTTAGAG CAGTGGGGACTCGTTAATTACCAAGTTGACCCGGAAAGTAGACCCATGGCAATGGGACCTCCTCCTACTCCTCATTTTAATGTATTAGCT GATACCCCCTCTGGGCTTGTGCCTCTGCATCTTCGATCACCTCAGGTTCCTGCTGCTCAACAGATGCTAAATTTTCCTGAGAAAAACAAG GAAAAACCAGTTGATTTGCAGAACTTTGGTCTCCGTACTGACATTTACTCCAAGAAAACATTAGCAAAGAGTAAAGGTGCTAGTGCTGGA AGAGAATGGACTGAACAGGAGACCCTTCTACTCCTGGAGGCCCTGGAGATGTACAAGGATGATTGGAACAAAGTGTCGGAACATGTTGGA AGTCGTACTCAGGATGAATGCATCCTCCACTTTTTGAGACTTCCCATTGAGGACCCATACCTTGAGAATTCAGATGCTTCCCTTGGGCCT TTGGCCTACCAGCCTGTCCCCTTCAGTCAGTCAGGAAATCCAGTTATGAGTACTGTTGCTTTTTTGGCATCTGTGGTGGACCCTCGCGTG GCATCTGCTGCAGCAAAAGCGGCTTTGGAGGAGTTTTCTCGGGTCCGGGAGGAGGTACCACTGGAATTGGTTGAAGCTCATGTCAAGAAA GTACAAGAAGCAGCACGAGCCTCTGGGAAAGTGGATCCCACCTACGGTCTGGAGAGCAGCTGCATTGCAGGCACAGGGCCCGATGAGCCA GAGAAGCTTGAAGGAGCTGAAGAGGAAAAAATGGAAGCCGACCCTGATGGTCAGCAGCCTGAAAAGGCAGAAAATAAAGTGGAAAATGAA ACGGATGAAGGTGATAAAGCACAAGATGGAGAAAATGAAAAAAATAGTGAAAAGGAACAGGATAGTGAAGTGAGTGAGGATACCAAATCA GAAGAAAAGGAGACTGAAGAGAACAAAGAACTCACTGATACATGTAAAGAAAGAGAAAGTGATACTGGGAAGAAGAAAGTAGAACATGAA ATTTCCGAAGGAAATGTTGCCACAGCCGCAGCAGCTGCTCTTGCCTCAGCGGCTACCAAAGCCAAGGACTACATCCCCGTGGAGGGTGAG CTGCTGTTCCAGCCTGGGGAGGCCTGGAAAGAGCTGCAGGTGAAGCTCCTGGAGCTGCAAGAAGTTGACTCCCTCCTGCGGGGCCGCCAG GTCCGCCGTTTCCACGTCCAGCTCAGCAACCCTAAGTTTGGGGCCCACCTGGGCCAGCCCCACTCCACCACCATCATCATCAGGGACCCA GATGAACTGGACCGGAGCTTCACGAGTCAGATGTTGTCATCACAGCCACCCCCTCACGGCGACCTGGGCGCCCCGCAGAACCCCAATGCT AAGGCCGCTGGGTCCAGGAAGATCCATTTCAACTGGCTGCCCCCTTCTGGCAAGCCAATGGGGTACAGGGTAAAGTACTGGATTCAGGGT GACTCCGAATCCGAAGCCCACCTGCTCGACAGCAAGGTGCCCTCAGTGGAGCTCACCAACCTGTACCCGTATTGCGACTATGAGATGAAG GTGTGCGCCTACGGGGCTCAGGGCGAGGGACCCTACAGCTCCCTGGTGTCCTGCCGCACCCACCAGGAAGTGCCCAGCGAGCCAGGGCGT CTGGCCTTCAATGTCGTCTCCTCCACGGTGACCCAGCTGAGCTGGGCTGAGCCGGCTGAGACCAACGGTGAGATCACAGCCTACGAGGTC TGCTATGGCCTGGTCAACGATGACAACCGACCTATTGGGCCCATGAAGAAAGTGCTGGTTGACAACCCTAAGAACCGGATGCTGCTTATT GAGAACCTTCGGGAGTCCCAGCCCTACCGCTACACGGTGAAGGCGCGCAACGGGGCCGGCTGGGGGCCTGAGCGGGAGGCCATCATCAAC CTGGCCACCCAGCCCAAGAGGCCCATGTCCATCCCCATCATCCCTGACATCCCTATCGTGGACGCCCAGAGCGGGGAGGACTACGACAGC TTCCTTATGTACAGCGATGACGTTCTACGCTCTCCATCGGGCAGCCAGAGGCCCAGCGTCTCCGATGACACTGGCTGCGGCTGGAAGTTC GAGCCCCTGCTGGGGGAGGAGCTGGACCTGCGGCGCGTCACGTGGCGGCTGCCCCCGGAGCTCATCCCGCGCCTGTCGGCCAGCAGCGGG CGCTCCTCCGACGCCGAGGCGCCCCACGGGCCCCCGGACGACGGCGGCGCGGGCGGGAAGGGCGGCAGCCTGCCCCGCAGTGCGACACCC GGGCCCCCCGGAGAGCACCTGGTGAATGGCCGGATGGACTTTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGATGACCACGACCAGT GCTGCTGCCTATGGCACCCACCTGAGCCCACACGTGCCCCACCGCGTGCTAAGCACATCCTCCACCCTCACACGGGACTACAACTCACTG ACCCGCTCAGAACACTCACACTCGACCACACTGCCCAGGGACTACTCCACCCTCACCTCCGTCTCCTCCCACGACTCTCGCCTGACTGCT GGTGTGCCCGACACGCCCACCCGCCTGGTGTTCTCTGCCCTGGGGCCCACATCTCTCAGAGTGAGCTGGCAGGAGCCGCGGTGCGAGCGG CCGCTGCAGGGCTACAGTGTGGAGTACCAGCTGCTGAACGGCGGTGAGCTGCATCGGCTCAACATCCCCAACCCTGCCCAGACCTCGGTG GTGGTGGAAGACCTCCTGCCCAACCACTCCTACGTGTTCCGCGTGCGGGCCCAGAGCCAGGAAGGCTGGGGCCGAGAGCGTGAGGGTGTC ATCACCATTGAATCCCAGGTGCACCCGCAGAGCCCACTGTGTCCCCTGCCAGGCTCCGCCTTCACTTTGAGCACTCCCAGTGCCCCAGGC CCGCTGGTGTTCACTGCCCTGAGCCCAGACTCGCTGCAGCTGAGCTGGGAGCGGCCACGGAGGCCCAATGGGGATATCGTCGGCTACCTG GTGACCTGTGAGATGGCCCAAGGAGGAGGGCCAGCCACCGCATTCCGGGTGGATGGAGACAGCCCCGAGAGCCGGCTGACCGTGCCGGGC CTCAGCGAGAACGTGCCCTACAAGTTCAAGGTGCAGGCCAGGACCACTGAGGGCTTCGGGCCAGAGCGCGAGGGCATCATCACCATAGAG TCCCAGGATGGAGGACCCTTCCCGCAGCTGGGCAGCCGTGCCGGGCTCTTCCAGCACCCGCTGCAAAGCGAGTACAGCAGCATCACCACC ACCCACACCAGCGCCACCGAGCCCTTCCTAGTGGATGGGCTGACCCTGGGGGCCCAGCACCTGGAGGCAGGCGGCTCCCTCACCCGGCAT GTGACCCAGGAGTTTGTGAGCCGGACACTGACCACCAGCGGAACCCTTAGCACCCACATGGACCAACAGTTCTTCCAAACTTGACCGCAC CCTGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCACCCCTGGGGG CCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTA >83942_83942_1_SMARCC1-ITGB4_SMARCC1_chr3_47676680_ENST00000254480_ITGB4_chr17_73744922_ENST00000200181_length(amino acids)=1675AA_BP=890 MWGRRAATMAAAAGGGGPGTAVGATGSGIAAAAAGLAVYRRKDGGPATKFWESPETVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVV QLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGALCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYL IPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQDDEEWLRPVMRKEKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKP WKVHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLY GKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKKDSENTPVKGGTVADLDEQDEETVTAGGKEDEDPAKGDQSRSVDLGEDNV TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQW GLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPVDLQNFGLRTDIYSKKTLAKSKGASAGRE WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVAS AAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMEADPDGQQPEKAENKVENETD EGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKELTDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKDYIPVEGELL FQPGEAWKELQVKLLELQEVDSLLRGRQVRRFHVQLSNPKFGAHLGQPHSTTIIIRDPDELDRSFTSQMLSSQPPPHGDLGAPQNPNAKA AGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLA FNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLA TQPKRPMSIPIIPDIPIVDAQSGEDYDSFLMYSDDVLRSPSGSQRPSVSDDTGCGWKFEPLLGEELDLRRVTWRLPPELIPRLSASSGRS SDAEAPHGPPDDGGAGGKGGSLPRSATPGPPGEHLVNGRMDFAFPGSTNSLHRMTTTSAAAYGTHLSPHVPHRVLSTSSTLTRDYNSLTR SEHSHSTTLPRDYSTLTSVSSHDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLNIPNPAQTSVVV EDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVHPQSPLCPLPGSAFTLSTPSAPGPLVFTALSPDSLQLSWERPRRPNGDIVGYLVT CEMAQGGGPATAFRVDGDSPESRLTVPGLSENVPYKFKVQARTTEGFGPEREGIITIESQDGGPFPQLGSRAGLFQHPLQSEYSSITTTH -------------------------------------------------------------- >83942_83942_2_SMARCC1-ITGB4_SMARCC1_chr3_47676680_ENST00000254480_ITGB4_chr17_73744922_ENST00000339591_length(transcript)=5335nt_BP=2766nt GGCTGGGCGGGGCCGGGAAGCGGCAGTGGCGGCTACGCGCGCGGGGGTGCGCGCGGGAACGACCGGGAAACACCGCGAGGGCCGGGGTGG GCCAGGCTGTGGGGACGACGGGCTGCGACGATGGCCGCAGCGGCGGGCGGCGGCGGGCCGGGGACAGCGGTAGGCGCCACGGGCTCGGGG ATTGCGGCGGCAGCCGCAGGCCTAGCTGTTTATCGACGGAAGGATGGGGGCCCGGCCACCAAGTTTTGGGAGAGCCCGGAGACGGTGTCC CAGCTGGATTCGGTGCGGGTCTGGCTGGGCAAGCACTACAAGAAGTATGTTCATGCGGATGCTCCTACCAATAAAACACTGGCTGGGCTG GTGGTGCAGCTTCTTCAGTTCCAGGAAGATGCCTTTGGGAAGCATGTCACCAACCCGGCCTTCACCAAACTCCCTGCAAAGTGTTTCATG GATTTCAAAGCTGGAGGCGCCTTATGTCACATTCTTGGGGCTGCTTACAAGTATAAAAATGAACAGGGATGGCGGAGGTTTGACCTACAG AACCCATCTCGAATGGATCGTAATGTGGAAATGTTTATGAACATTGAAAAAACATTGGTGCAGAACAATTGTTTGACCAGACCCAACATC TACCTCATTCCAGACATTGATCTGAAGTTGGCTAACAAATTGAAAGATATCATCAAACGACATCAGGGAACATTTACGGATGAGAAGTCA AAAGCTTCCCACCACATTTACCCATATTCTTCCTCACAAGACGATGAAGAATGGTTGAGACCGGTGATGAGAAAAGAGAAGCAAGTGTTA GTGCATTGGGGCTTTTACCCAGACAGCTATGATACTTGGGTCCATAGTAATGATGTTGATGCTGAAATTGAAGATCCACCAATTCCAGAA AAACCATGGAAGGTTCATGTGAAATGGATTTTGGACACTGATATTTTCAATGAATGGATGAATGAGGAGGATTATGAGGTGGATGAAAAT AGGAAGCCTGTGAGTTTTCGTCAGCGGATTTCAACCAAGAATGAAGAGCCAGTCAGAAGTCCAGAAAGAAGAGATAGAAAAGCATCAGCT AATGCTCGAAAGAGGAAACATTCGCCTTCGCCTCCCCCTCCGACACCAACAGAATCACGGAAGAAGAGTGGGAAGAAAGGCCAAGCTAGC CTTTATGGGAAGCGCAGAAGTCAGAAAGAGGAAGATGAGCAAGAAGATCTAACCAAGGATATGGAAGACCCAACACCTGTACCCAATATA GAAGAAGTAGTACTTCCCAAAAATGTGAACCTAAAGAAAGATAGTGAAAATACACCTGTTAAAGGAGGAACTGTAGCGGATCTAGATGAG CAGGATGAAGAAACAGTCACAGCAGGAGGAAAGGAAGATGAAGATCCTGCCAAAGGTGATCAGAGTCGATCAGTTGACCTTGGGGAAGAT AATGTGACAGAGCAGACCAATCACATTATTATTCCTAGTTATGCATCATGGTTTGATTATAACTGTATTCATGTGATTGAACGGCGTGCT CTTCCTGAGTTCTTCAATGGAAAAAACAAATCCAAGACTCCAGAAATATACTTGGCATATCGAAATTTTATGATTGACACGTATCGTCTA AACCCCCAAGAGTATTTAACTAGCACTGCTTGTCGGAGGAACTTGACTGGAGATGTGTGTGCTGTGATGAGGGTCCATGCCTTTTTAGAG CAGTGGGGACTCGTTAATTACCAAGTTGACCCGGAAAGTAGACCCATGGCAATGGGACCTCCTCCTACTCCTCATTTTAATGTATTAGCT GATACCCCCTCTGGGCTTGTGCCTCTGCATCTTCGATCACCTCAGGTTCCTGCTGCTCAACAGATGCTAAATTTTCCTGAGAAAAACAAG GAAAAACCAGTTGATTTGCAGAACTTTGGTCTCCGTACTGACATTTACTCCAAGAAAACATTAGCAAAGAGTAAAGGTGCTAGTGCTGGA AGAGAATGGACTGAACAGGAGACCCTTCTACTCCTGGAGGCCCTGGAGATGTACAAGGATGATTGGAACAAAGTGTCGGAACATGTTGGA AGTCGTACTCAGGATGAATGCATCCTCCACTTTTTGAGACTTCCCATTGAGGACCCATACCTTGAGAATTCAGATGCTTCCCTTGGGCCT TTGGCCTACCAGCCTGTCCCCTTCAGTCAGTCAGGAAATCCAGTTATGAGTACTGTTGCTTTTTTGGCATCTGTGGTGGACCCTCGCGTG GCATCTGCTGCAGCAAAAGCGGCTTTGGAGGAGTTTTCTCGGGTCCGGGAGGAGGTACCACTGGAATTGGTTGAAGCTCATGTCAAGAAA GTACAAGAAGCAGCACGAGCCTCTGGGAAAGTGGATCCCACCTACGGTCTGGAGAGCAGCTGCATTGCAGGCACAGGGCCCGATGAGCCA GAGAAGCTTGAAGGAGCTGAAGAGGAAAAAATGGAAGCCGACCCTGATGGTCAGCAGCCTGAAAAGGCAGAAAATAAAGTGGAAAATGAA ACGGATGAAGGTGATAAAGCACAAGATGGAGAAAATGAAAAAAATAGTGAAAAGGAACAGGATAGTGAAGTGAGTGAGGATACCAAATCA GAAGAAAAGGAGACTGAAGAGAACAAAGAACTCACTGATACATGTAAAGAAAGAGAAAGTGATACTGGGAAGAAGAAAGTAGAACATGAA ATTTCCGAAGGAAATGTTGCCACAGCCGCAGCAGCTGCTCTTGCCTCAGCGGCTACCAAAGCCAAGGACTACATCCCCGTGGAGGGTGAG CTGCTGTTCCAGCCTGGGGAGGCCTGGAAAGAGCTGCAGGTGAAGCTCCTGGAGCTGCAAGAAGTTGACTCCCTCCTGCGGGGCCGCCAG GTCCGCCGTTTCCACGTCCAGCTCAGCAACCCTAAGTTTGGGGCCCACCTGGGCCAGCCCCACTCCACCACCATCATCATCAGGGACCCA GATGAACTGGACCGGAGCTTCACGAGTCAGATGTTGTCATCACAGCCACCCCCTCACGGCGACCTGGGCGCCCCGCAGAACCCCAATGCT AAGGCCGCTGGGTCCAGGAAGATCCATTTCAACTGGCTGCCCCCTTCTGGCAAGCCAATGGGGTACAGGGTAAAGTACTGGATTCAGGGT GACTCCGAATCCGAAGCCCACCTGCTCGACAGCAAGGTGCCCTCAGTGGAGCTCACCAACCTGTACCCGTATTGCGACTATGAGATGAAG GTGTGCGCCTACGGGGCTCAGGGCGAGGGACCCTACAGCTCCCTGGTGTCCTGCCGCACCCACCAGGAAGTGCCCAGCGAGCCAGGGCGT CTGGCCTTCAATGTCGTCTCCTCCACGGTGACCCAGCTGAGCTGGGCTGAGCCGGCTGAGACCAACGGTGAGATCACAGCCTACGAGGTC TGCTATGGCCTGGTCAACGATGACAACCGACCTATTGGGCCCATGAAGAAAGTGCTGGTTGACAACCCTAAGAACCGGATGCTGCTTATT GAGAACCTTCGGGAGTCCCAGCCCTACCGCTACACGGTGAAGGCGCGCAACGGGGCCGGCTGGGGGCCTGAGCGGGAGGCCATCATCAAC CTGGCCACCCAGCCCAAGAGGCCCATGTCCATCCCCATCATCCCTGACATCCCTATCGTGGACGCCCAGAGCGGGGAGGACTACGACAGC TTCCTTATGTACAGCGATGACGTTCTACGCTCTCCATCGGGCAGCCAGAGGCCCAGCGTCTCCGATGACACTGAGCACCTGGTGAATGGC CGGATGGACTTTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGATGACCACGACCAGTGCTGCTGCCTATGGCACCCACCTGAGCCCA CACGTGCCCCACCGCGTGCTAAGCACATCCTCCACCCTCACACGGGACTACAACTCACTGACCCGCTCAGAACACTCACACTCGACCACA CTGCCCAGGGACTACTCCACCCTCACCTCCGTCTCCTCCCACGGCCTCCCTCCCATCTGGGAACACGGGAGGAGCAGGCTTCCGCTGTCC TGGGCCCTGGGGTCCCGGAGTCGGGCTCAGATGAAAGGGTTCCCCCCTTCCAGGGGCCCACGAGACTCTATAATCCTGGCTGGGAGGCCA GCAGCGCCCTCCTGGGGCCCAGACTCTCGCCTGACTGCTGGTGTGCCCGACACGCCCACCCGCCTGGTGTTCTCTGCCCTGGGGCCCACA TCTCTCAGAGTGAGCTGGCAGGAGCCGCGGTGCGAGCGGCCGCTGCAGGGCTACAGTGTGGAGTACCAGCTGCTGAACGGCGGTGAGCTG CATCGGCTCAACATCCCCAACCCTGCCCAGACCTCGGTGGTGGTGGAAGACCTCCTGCCCAACCACTCCTACGTGTTCCGCGTGCGGGCC CAGAGCCAGGAAGGCTGGGGCCGAGAGCGTGAGGGTGTCATCACCATTGAATCCCAGGTGCACCCGCAGAGCCCACTGTGTCCCCTGCCA GGCTCCGCCTTCACTTTGAGCACTCCCAGTGCCCCAGGCCCGCTGGTGTTCACTGCCCTGAGCCCAGACTCGCTGCAGCTGAGCTGGGAG CGGCCACGGAGGCCCAATGGGGATATCGTCGGCTACCTGGTGACCTGTGAGATGGCCCAAGGAGGAGGGCCAGCCACCGCATTCCGGGTG GATGGAGACAGCCCCGAGAGCCGGCTGACCGTGCCGGGCCTCAGCGAGAACGTGCCCTACAAGTTCAAGGTGCAGGCCAGGACCACTGAG GGCTTCGGGCCAGAGCGCGAGGGCATCATCACCATAGAGTCCCAGGATGGAGGACCCTTCCCGCAGCTGGGCAGCCGTGCCGGGCTCTTC CAGCACCCGCTGCAAAGCGAGTACAGCAGCATCACCACCACCCACACCAGCGCCACCGAGCCCTTCCTAGTGGATGGGCTGACCCTGGGG GCCCAGCACCTGGAGGCAGGCGGCTCCCTCACCCGGCATGTGACCCAGGAGTTTGTGAGCCGGACACTGACCACCAGCGGAACCCTTAGC ACCCACATGGACCAACAGTTCTTCCAAACTTGACCGCACCCTGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCC GGAGCCTCCTCAGCTACTCCATCCTTGCACCCCTGGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCA TGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCA >83942_83942_2_SMARCC1-ITGB4_SMARCC1_chr3_47676680_ENST00000254480_ITGB4_chr17_73744922_ENST00000339591_length(amino acids)=1658AA_BP=890 MWGRRAATMAAAAGGGGPGTAVGATGSGIAAAAAGLAVYRRKDGGPATKFWESPETVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVV QLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGALCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYL IPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQDDEEWLRPVMRKEKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKP WKVHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLY GKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKKDSENTPVKGGTVADLDEQDEETVTAGGKEDEDPAKGDQSRSVDLGEDNV TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQW GLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPVDLQNFGLRTDIYSKKTLAKSKGASAGRE WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVAS AAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMEADPDGQQPEKAENKVENETD EGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKELTDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKDYIPVEGELL FQPGEAWKELQVKLLELQEVDSLLRGRQVRRFHVQLSNPKFGAHLGQPHSTTIIIRDPDELDRSFTSQMLSSQPPPHGDLGAPQNPNAKA AGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLA FNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLA TQPKRPMSIPIIPDIPIVDAQSGEDYDSFLMYSDDVLRSPSGSQRPSVSDDTEHLVNGRMDFAFPGSTNSLHRMTTTSAAAYGTHLSPHV PHRVLSTSSTLTRDYNSLTRSEHSHSTTLPRDYSTLTSVSSHGLPPIWEHGRSRLPLSWALGSRSRAQMKGFPPSRGPRDSIILAGRPAA PSWGPDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQS QEGWGREREGVITIESQVHPQSPLCPLPGSAFTLSTPSAPGPLVFTALSPDSLQLSWERPRRPNGDIVGYLVTCEMAQGGGPATAFRVDG DSPESRLTVPGLSENVPYKFKVQARTTEGFGPEREGIITIESQDGGPFPQLGSRAGLFQHPLQSEYSSITTTHTSATEPFLVDGLTLGAQ -------------------------------------------------------------- >83942_83942_3_SMARCC1-ITGB4_SMARCC1_chr3_47676680_ENST00000254480_ITGB4_chr17_73744922_ENST00000449880_length(transcript)=5336nt_BP=2766nt GGCTGGGCGGGGCCGGGAAGCGGCAGTGGCGGCTACGCGCGCGGGGGTGCGCGCGGGAACGACCGGGAAACACCGCGAGGGCCGGGGTGG GCCAGGCTGTGGGGACGACGGGCTGCGACGATGGCCGCAGCGGCGGGCGGCGGCGGGCCGGGGACAGCGGTAGGCGCCACGGGCTCGGGG ATTGCGGCGGCAGCCGCAGGCCTAGCTGTTTATCGACGGAAGGATGGGGGCCCGGCCACCAAGTTTTGGGAGAGCCCGGAGACGGTGTCC CAGCTGGATTCGGTGCGGGTCTGGCTGGGCAAGCACTACAAGAAGTATGTTCATGCGGATGCTCCTACCAATAAAACACTGGCTGGGCTG GTGGTGCAGCTTCTTCAGTTCCAGGAAGATGCCTTTGGGAAGCATGTCACCAACCCGGCCTTCACCAAACTCCCTGCAAAGTGTTTCATG GATTTCAAAGCTGGAGGCGCCTTATGTCACATTCTTGGGGCTGCTTACAAGTATAAAAATGAACAGGGATGGCGGAGGTTTGACCTACAG AACCCATCTCGAATGGATCGTAATGTGGAAATGTTTATGAACATTGAAAAAACATTGGTGCAGAACAATTGTTTGACCAGACCCAACATC TACCTCATTCCAGACATTGATCTGAAGTTGGCTAACAAATTGAAAGATATCATCAAACGACATCAGGGAACATTTACGGATGAGAAGTCA AAAGCTTCCCACCACATTTACCCATATTCTTCCTCACAAGACGATGAAGAATGGTTGAGACCGGTGATGAGAAAAGAGAAGCAAGTGTTA GTGCATTGGGGCTTTTACCCAGACAGCTATGATACTTGGGTCCATAGTAATGATGTTGATGCTGAAATTGAAGATCCACCAATTCCAGAA AAACCATGGAAGGTTCATGTGAAATGGATTTTGGACACTGATATTTTCAATGAATGGATGAATGAGGAGGATTATGAGGTGGATGAAAAT AGGAAGCCTGTGAGTTTTCGTCAGCGGATTTCAACCAAGAATGAAGAGCCAGTCAGAAGTCCAGAAAGAAGAGATAGAAAAGCATCAGCT AATGCTCGAAAGAGGAAACATTCGCCTTCGCCTCCCCCTCCGACACCAACAGAATCACGGAAGAAGAGTGGGAAGAAAGGCCAAGCTAGC CTTTATGGGAAGCGCAGAAGTCAGAAAGAGGAAGATGAGCAAGAAGATCTAACCAAGGATATGGAAGACCCAACACCTGTACCCAATATA GAAGAAGTAGTACTTCCCAAAAATGTGAACCTAAAGAAAGATAGTGAAAATACACCTGTTAAAGGAGGAACTGTAGCGGATCTAGATGAG CAGGATGAAGAAACAGTCACAGCAGGAGGAAAGGAAGATGAAGATCCTGCCAAAGGTGATCAGAGTCGATCAGTTGACCTTGGGGAAGAT AATGTGACAGAGCAGACCAATCACATTATTATTCCTAGTTATGCATCATGGTTTGATTATAACTGTATTCATGTGATTGAACGGCGTGCT CTTCCTGAGTTCTTCAATGGAAAAAACAAATCCAAGACTCCAGAAATATACTTGGCATATCGAAATTTTATGATTGACACGTATCGTCTA AACCCCCAAGAGTATTTAACTAGCACTGCTTGTCGGAGGAACTTGACTGGAGATGTGTGTGCTGTGATGAGGGTCCATGCCTTTTTAGAG CAGTGGGGACTCGTTAATTACCAAGTTGACCCGGAAAGTAGACCCATGGCAATGGGACCTCCTCCTACTCCTCATTTTAATGTATTAGCT GATACCCCCTCTGGGCTTGTGCCTCTGCATCTTCGATCACCTCAGGTTCCTGCTGCTCAACAGATGCTAAATTTTCCTGAGAAAAACAAG GAAAAACCAGTTGATTTGCAGAACTTTGGTCTCCGTACTGACATTTACTCCAAGAAAACATTAGCAAAGAGTAAAGGTGCTAGTGCTGGA AGAGAATGGACTGAACAGGAGACCCTTCTACTCCTGGAGGCCCTGGAGATGTACAAGGATGATTGGAACAAAGTGTCGGAACATGTTGGA AGTCGTACTCAGGATGAATGCATCCTCCACTTTTTGAGACTTCCCATTGAGGACCCATACCTTGAGAATTCAGATGCTTCCCTTGGGCCT TTGGCCTACCAGCCTGTCCCCTTCAGTCAGTCAGGAAATCCAGTTATGAGTACTGTTGCTTTTTTGGCATCTGTGGTGGACCCTCGCGTG GCATCTGCTGCAGCAAAAGCGGCTTTGGAGGAGTTTTCTCGGGTCCGGGAGGAGGTACCACTGGAATTGGTTGAAGCTCATGTCAAGAAA GTACAAGAAGCAGCACGAGCCTCTGGGAAAGTGGATCCCACCTACGGTCTGGAGAGCAGCTGCATTGCAGGCACAGGGCCCGATGAGCCA GAGAAGCTTGAAGGAGCTGAAGAGGAAAAAATGGAAGCCGACCCTGATGGTCAGCAGCCTGAAAAGGCAGAAAATAAAGTGGAAAATGAA ACGGATGAAGGTGATAAAGCACAAGATGGAGAAAATGAAAAAAATAGTGAAAAGGAACAGGATAGTGAAGTGAGTGAGGATACCAAATCA GAAGAAAAGGAGACTGAAGAGAACAAAGAACTCACTGATACATGTAAAGAAAGAGAAAGTGATACTGGGAAGAAGAAAGTAGAACATGAA ATTTCCGAAGGAAATGTTGCCACAGCCGCAGCAGCTGCTCTTGCCTCAGCGGCTACCAAAGCCAAGGACTACATCCCCGTGGAGGGTGAG CTGCTGTTCCAGCCTGGGGAGGCCTGGAAAGAGCTGCAGGTGAAGCTCCTGGAGCTGCAAGAAGTTGACTCCCTCCTGCGGGGCCGCCAG GTCCGCCGTTTCCACGTCCAGCTCAGCAACCCTAAGTTTGGGGCCCACCTGGGCCAGCCCCACTCCACCACCATCATCATCAGGGACCCA GATGAACTGGACCGGAGCTTCACGAGTCAGATGTTGTCATCACAGCCACCCCCTCACGGCGACCTGGGCGCCCCGCAGAACCCCAATGCT AAGGCCGCTGGGTCCAGGAAGATCCATTTCAACTGGCTGCCCCCTTCTGGCAAGCCAATGGGGTACAGGGTAAAGTACTGGATTCAGGGT GACTCCGAATCCGAAGCCCACCTGCTCGACAGCAAGGTGCCCTCAGTGGAGCTCACCAACCTGTACCCGTATTGCGACTATGAGATGAAG GTGTGCGCCTACGGGGCTCAGGGCGAGGGACCCTACAGCTCCCTGGTGTCCTGCCGCACCCACCAGGAAGTGCCCAGCGAGCCAGGGCGT CTGGCCTTCAATGTCGTCTCCTCCACGGTGACCCAGCTGAGCTGGGCTGAGCCGGCTGAGACCAACGGTGAGATCACAGCCTACGAGGTC TGCTATGGCCTGGTCAACGATGACAACCGACCTATTGGGCCCATGAAGAAAGTGCTGGTTGACAACCCTAAGAACCGGATGCTGCTTATT GAGAACCTTCGGGAGTCCCAGCCCTACCGCTACACGGTGAAGGCGCGCAACGGGGCCGGCTGGGGGCCTGAGCGGGAGGCCATCATCAAC CTGGCCACCCAGCCCAAGAGGCCCATGTCCATCCCCATCATCCCTGACATCCCTATCGTGGACGCCCAGAGCGGGGAGGACTACGACAGC TTCCTTATGTACAGCGATGACGTTCTACGCTCTCCATCGGGCAGCCAGAGGCCCAGCGTCTCCGATGACACTGAGCACCTGGTGAATGGC CGGATGGACTTTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGATGACCACGACCAGTGCTGCTGCCTATGGCACCCACCTGAGCCCA CACGTGCCCCACCGCGTGCTAAGCACATCCTCCACCCTCACACGGGACTACAACTCACTGACCCGCTCAGAACACTCACACTCGACCACA CTGCCCAGGGACTACTCCACCCTCACCTCCGTCTCCTCCCACGGCCTCCCTCCCATCTGGGAACACGGGAGGAGCAGGCTTCCGCTGTCC TGGGCCCTGGGGTCCCGGAGTCGGGCTCAGATGAAAGGGTTCCCCCCTTCCAGGGGCCCACGAGACTCTATAATCCTGGCTGGGAGGCCA GCAGCGCCCTCCTGGGGCCCAGACTCTCGCCTGACTGCTGGTGTGCCCGACACGCCCACCCGCCTGGTGTTCTCTGCCCTGGGGCCCACA TCTCTCAGAGTGAGCTGGCAGGAGCCGCGGTGCGAGCGGCCGCTGCAGGGCTACAGTGTGGAGTACCAGCTGCTGAACGGCGGTGAGCTG CATCGGCTCAACATCCCCAACCCTGCCCAGACCTCGGTGGTGGTGGAAGACCTCCTGCCCAACCACTCCTACGTGTTCCGCGTGCGGGCC CAGAGCCAGGAAGGCTGGGGCCGAGAGCGTGAGGGTGTCATCACCATTGAATCCCAGGTGCACCCGCAGAGCCCACTGTGTCCCCTGCCA GGCTCCGCCTTCACTTTGAGCACTCCCAGTGCCCCAGGCCCGCTGGTGTTCACTGCCCTGAGCCCAGACTCGCTGCAGCTGAGCTGGGAG CGGCCACGGAGGCCCAATGGGGATATCGTCGGCTACCTGGTGACCTGTGAGATGGCCCAAGGAGGAGGGCCAGCCACCGCATTCCGGGTG GATGGAGACAGCCCCGAGAGCCGGCTGACCGTGCCGGGCCTCAGCGAGAACGTGCCCTACAAGTTCAAGGTGCAGGCCAGGACCACTGAG GGCTTCGGGCCAGAGCGCGAGGGCATCATCACCATAGAGTCCCAGGATGGAGGACCCTTCCCGCAGCTGGGCAGCCGTGCCGGGCTCTTC CAGCACCCGCTGCAAAGCGAGTACAGCAGCATCACCACCACCCACACCAGCGCCACCGAGCCCTTCCTAGTGGATGGGCTGACCCTGGGG GCCCAGCACCTGGAGGCAGGCGGCTCCCTCACCCGGCATGTGACCCAGGAGTTTGTGAGCCGGACACTGACCACCAGCGGAACCCTTAGC ACCCACATGGACCAACAGTTCTTCCAAACTTGACCGCACCCTGCCCCACCCCCGCCACGTCCCACTAGGCGTCCTCCCGACTCCTCTCCC GGAGCCTCCTCAGCTACTCCATCCTTGCACCCCTGGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGGCTAGGTGTCTCCTGGGAGGCA TGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAAGGACCCAGCCTTTGTTCTGCA >83942_83942_3_SMARCC1-ITGB4_SMARCC1_chr3_47676680_ENST00000254480_ITGB4_chr17_73744922_ENST00000449880_length(amino acids)=1658AA_BP=890 MWGRRAATMAAAAGGGGPGTAVGATGSGIAAAAAGLAVYRRKDGGPATKFWESPETVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVV QLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGALCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYL IPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQDDEEWLRPVMRKEKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKP WKVHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLY GKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKKDSENTPVKGGTVADLDEQDEETVTAGGKEDEDPAKGDQSRSVDLGEDNV TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQW GLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPVDLQNFGLRTDIYSKKTLAKSKGASAGRE WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVAS AAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMEADPDGQQPEKAENKVENETD EGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKELTDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKDYIPVEGELL FQPGEAWKELQVKLLELQEVDSLLRGRQVRRFHVQLSNPKFGAHLGQPHSTTIIIRDPDELDRSFTSQMLSSQPPPHGDLGAPQNPNAKA AGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLA FNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLA TQPKRPMSIPIIPDIPIVDAQSGEDYDSFLMYSDDVLRSPSGSQRPSVSDDTEHLVNGRMDFAFPGSTNSLHRMTTTSAAAYGTHLSPHV PHRVLSTSSTLTRDYNSLTRSEHSHSTTLPRDYSTLTSVSSHGLPPIWEHGRSRLPLSWALGSRSRAQMKGFPPSRGPRDSIILAGRPAA PSWGPDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQS QEGWGREREGVITIESQVHPQSPLCPLPGSAFTLSTPSAPGPLVFTALSPDSLQLSWERPRRPNGDIVGYLVTCEMAQGGGPATAFRVDG DSPESRLTVPGLSENVPYKFKVQARTTEGFGPEREGIITIESQDGGPFPQLGSRAGLFQHPLQSEYSSITTTHTSATEPFLVDGLTLGAQ -------------------------------------------------------------- >83942_83942_4_SMARCC1-ITGB4_SMARCC1_chr3_47676680_ENST00000254480_ITGB4_chr17_73744922_ENST00000450894_length(transcript)=5174nt_BP=2766nt GGCTGGGCGGGGCCGGGAAGCGGCAGTGGCGGCTACGCGCGCGGGGGTGCGCGCGGGAACGACCGGGAAACACCGCGAGGGCCGGGGTGG GCCAGGCTGTGGGGACGACGGGCTGCGACGATGGCCGCAGCGGCGGGCGGCGGCGGGCCGGGGACAGCGGTAGGCGCCACGGGCTCGGGG ATTGCGGCGGCAGCCGCAGGCCTAGCTGTTTATCGACGGAAGGATGGGGGCCCGGCCACCAAGTTTTGGGAGAGCCCGGAGACGGTGTCC CAGCTGGATTCGGTGCGGGTCTGGCTGGGCAAGCACTACAAGAAGTATGTTCATGCGGATGCTCCTACCAATAAAACACTGGCTGGGCTG GTGGTGCAGCTTCTTCAGTTCCAGGAAGATGCCTTTGGGAAGCATGTCACCAACCCGGCCTTCACCAAACTCCCTGCAAAGTGTTTCATG GATTTCAAAGCTGGAGGCGCCTTATGTCACATTCTTGGGGCTGCTTACAAGTATAAAAATGAACAGGGATGGCGGAGGTTTGACCTACAG AACCCATCTCGAATGGATCGTAATGTGGAAATGTTTATGAACATTGAAAAAACATTGGTGCAGAACAATTGTTTGACCAGACCCAACATC TACCTCATTCCAGACATTGATCTGAAGTTGGCTAACAAATTGAAAGATATCATCAAACGACATCAGGGAACATTTACGGATGAGAAGTCA AAAGCTTCCCACCACATTTACCCATATTCTTCCTCACAAGACGATGAAGAATGGTTGAGACCGGTGATGAGAAAAGAGAAGCAAGTGTTA GTGCATTGGGGCTTTTACCCAGACAGCTATGATACTTGGGTCCATAGTAATGATGTTGATGCTGAAATTGAAGATCCACCAATTCCAGAA AAACCATGGAAGGTTCATGTGAAATGGATTTTGGACACTGATATTTTCAATGAATGGATGAATGAGGAGGATTATGAGGTGGATGAAAAT AGGAAGCCTGTGAGTTTTCGTCAGCGGATTTCAACCAAGAATGAAGAGCCAGTCAGAAGTCCAGAAAGAAGAGATAGAAAAGCATCAGCT AATGCTCGAAAGAGGAAACATTCGCCTTCGCCTCCCCCTCCGACACCAACAGAATCACGGAAGAAGAGTGGGAAGAAAGGCCAAGCTAGC CTTTATGGGAAGCGCAGAAGTCAGAAAGAGGAAGATGAGCAAGAAGATCTAACCAAGGATATGGAAGACCCAACACCTGTACCCAATATA GAAGAAGTAGTACTTCCCAAAAATGTGAACCTAAAGAAAGATAGTGAAAATACACCTGTTAAAGGAGGAACTGTAGCGGATCTAGATGAG CAGGATGAAGAAACAGTCACAGCAGGAGGAAAGGAAGATGAAGATCCTGCCAAAGGTGATCAGAGTCGATCAGTTGACCTTGGGGAAGAT AATGTGACAGAGCAGACCAATCACATTATTATTCCTAGTTATGCATCATGGTTTGATTATAACTGTATTCATGTGATTGAACGGCGTGCT CTTCCTGAGTTCTTCAATGGAAAAAACAAATCCAAGACTCCAGAAATATACTTGGCATATCGAAATTTTATGATTGACACGTATCGTCTA AACCCCCAAGAGTATTTAACTAGCACTGCTTGTCGGAGGAACTTGACTGGAGATGTGTGTGCTGTGATGAGGGTCCATGCCTTTTTAGAG CAGTGGGGACTCGTTAATTACCAAGTTGACCCGGAAAGTAGACCCATGGCAATGGGACCTCCTCCTACTCCTCATTTTAATGTATTAGCT GATACCCCCTCTGGGCTTGTGCCTCTGCATCTTCGATCACCTCAGGTTCCTGCTGCTCAACAGATGCTAAATTTTCCTGAGAAAAACAAG GAAAAACCAGTTGATTTGCAGAACTTTGGTCTCCGTACTGACATTTACTCCAAGAAAACATTAGCAAAGAGTAAAGGTGCTAGTGCTGGA AGAGAATGGACTGAACAGGAGACCCTTCTACTCCTGGAGGCCCTGGAGATGTACAAGGATGATTGGAACAAAGTGTCGGAACATGTTGGA AGTCGTACTCAGGATGAATGCATCCTCCACTTTTTGAGACTTCCCATTGAGGACCCATACCTTGAGAATTCAGATGCTTCCCTTGGGCCT TTGGCCTACCAGCCTGTCCCCTTCAGTCAGTCAGGAAATCCAGTTATGAGTACTGTTGCTTTTTTGGCATCTGTGGTGGACCCTCGCGTG GCATCTGCTGCAGCAAAAGCGGCTTTGGAGGAGTTTTCTCGGGTCCGGGAGGAGGTACCACTGGAATTGGTTGAAGCTCATGTCAAGAAA GTACAAGAAGCAGCACGAGCCTCTGGGAAAGTGGATCCCACCTACGGTCTGGAGAGCAGCTGCATTGCAGGCACAGGGCCCGATGAGCCA GAGAAGCTTGAAGGAGCTGAAGAGGAAAAAATGGAAGCCGACCCTGATGGTCAGCAGCCTGAAAAGGCAGAAAATAAAGTGGAAAATGAA ACGGATGAAGGTGATAAAGCACAAGATGGAGAAAATGAAAAAAATAGTGAAAAGGAACAGGATAGTGAAGTGAGTGAGGATACCAAATCA GAAGAAAAGGAGACTGAAGAGAACAAAGAACTCACTGATACATGTAAAGAAAGAGAAAGTGATACTGGGAAGAAGAAAGTAGAACATGAA ATTTCCGAAGGAAATGTTGCCACAGCCGCAGCAGCTGCTCTTGCCTCAGCGGCTACCAAAGCCAAGGACTACATCCCCGTGGAGGGTGAG CTGCTGTTCCAGCCTGGGGAGGCCTGGAAAGAGCTGCAGGTGAAGCTCCTGGAGCTGCAAGAAGTTGACTCCCTCCTGCGGGGCCGCCAG GTCCGCCGTTTCCACGTCCAGCTCAGCAACCCTAAGTTTGGGGCCCACCTGGGCCAGCCCCACTCCACCACCATCATCATCAGGGACCCA GATGAACTGGACCGGAGCTTCACGAGTCAGATGTTGTCATCACAGCCACCCCCTCACGGCGACCTGGGCGCCCCGCAGAACCCCAATGCT AAGGCCGCTGGGTCCAGGAAGATCCATTTCAACTGGCTGCCCCCTTCTGGCAAGCCAATGGGGTACAGGGTAAAGTACTGGATTCAGGGT GACTCCGAATCCGAAGCCCACCTGCTCGACAGCAAGGTGCCCTCAGTGGAGCTCACCAACCTGTACCCGTATTGCGACTATGAGATGAAG GTGTGCGCCTACGGGGCTCAGGGCGAGGGACCCTACAGCTCCCTGGTGTCCTGCCGCACCCACCAGGAAGTGCCCAGCGAGCCAGGGCGT CTGGCCTTCAATGTCGTCTCCTCCACGGTGACCCAGCTGAGCTGGGCTGAGCCGGCTGAGACCAACGGTGAGATCACAGCCTACGAGGTC TGCTATGGCCTGGTCAACGATGACAACCGACCTATTGGGCCCATGAAGAAAGTGCTGGTTGACAACCCTAAGAACCGGATGCTGCTTATT GAGAACCTTCGGGAGTCCCAGCCCTACCGCTACACGGTGAAGGCGCGCAACGGGGCCGGCTGGGGGCCTGAGCGGGAGGCCATCATCAAC CTGGCCACCCAGCCCAAGAGGCCCATGTCCATCCCCATCATCCCTGACATCCCTATCGTGGACGCCCAGAGCGGGGAGGACTACGACAGC TTCCTTATGTACAGCGATGACGTTCTACGCTCTCCATCGGGCAGCCAGAGGCCCAGCGTCTCCGATGACACTGAGCACCTGGTGAATGGC CGGATGGACTTTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGATGACCACGACCAGTGCTGCTGCCTATGGCACCCACCTGAGCCCA CACGTGCCCCACCGCGTGCTAAGCACATCCTCCACCCTCACACGGGACTACAACTCACTGACCCGCTCAGAACACTCACACTCGACCACA CTGCCCAGGGACTACTCCACCCTCACCTCCGTCTCCTCCCACGACTCTCGCCTGACTGCTGGTGTGCCCGACACGCCCACCCGCCTGGTG TTCTCTGCCCTGGGGCCCACATCTCTCAGAGTGAGCTGGCAGGAGCCGCGGTGCGAGCGGCCGCTGCAGGGCTACAGTGTGGAGTACCAG CTGCTGAACGGCGGTGAGCTGCATCGGCTCAACATCCCCAACCCTGCCCAGACCTCGGTGGTGGTGGAAGACCTCCTGCCCAACCACTCC TACGTGTTCCGCGTGCGGGCCCAGAGCCAGGAAGGCTGGGGCCGAGAGCGTGAGGGTGTCATCACCATTGAATCCCAGGTGCACCCGCAG AGCCCACTGTGTCCCCTGCCAGGCTCCGCCTTCACTTTGAGCACTCCCAGTGCCCCAGGCCCGCTGGTGTTCACTGCCCTGAGCCCAGAC TCGCTGCAGCTGAGCTGGGAGCGGCCACGGAGGCCCAATGGGGATATCGTCGGCTACCTGGTGACCTGTGAGATGGCCCAAGGAGGAGGG CCAGCCACCGCATTCCGGGTGGATGGAGACAGCCCCGAGAGCCGGCTGACCGTGCCGGGCCTCAGCGAGAACGTGCCCTACAAGTTCAAG GTGCAGGCCAGGACCACTGAGGGCTTCGGGCCAGAGCGCGAGGGCATCATCACCATAGAGTCCCAGGATGGAGGACCCTTCCCGCAGCTG GGCAGCCGTGCCGGGCTCTTCCAGCACCCGCTGCAAAGCGAGTACAGCAGCATCACCACCACCCACACCAGCGCCACCGAGCCCTTCCTA GTGGATGGGCTGACCCTGGGGGCCCAGCACCTGGAGGCAGGCGGCTCCCTCACCCGGCATGTGACCCAGGAGTTTGTGAGCCGGACACTG ACCACCAGCGGAACCCTTAGCACCCACATGGACCAACAGTTCTTCCAAACTTGACCGCACCCTGCCCCACCCCCGCCACGTCCCACTAGG CGTCCTCCCGACTCCTCTCCCGGAGCCTCCTCAGCTACTCCATCCTTGCACCCCTGGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGG CTAGGTGTCTCCTGGGAGGCATGAAGGGGGCAAGGTCCGTCCTCTGTGGGCCCAAACCTATTTGTAACCAAAGAGCTGGGAGCAGCACAA >83942_83942_4_SMARCC1-ITGB4_SMARCC1_chr3_47676680_ENST00000254480_ITGB4_chr17_73744922_ENST00000450894_length(amino acids)=1605AA_BP=890 MWGRRAATMAAAAGGGGPGTAVGATGSGIAAAAAGLAVYRRKDGGPATKFWESPETVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVV QLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGALCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYL IPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQDDEEWLRPVMRKEKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKP WKVHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLY GKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKKDSENTPVKGGTVADLDEQDEETVTAGGKEDEDPAKGDQSRSVDLGEDNV TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQW GLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPVDLQNFGLRTDIYSKKTLAKSKGASAGRE WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVAS AAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMEADPDGQQPEKAENKVENETD EGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKELTDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKDYIPVEGELL FQPGEAWKELQVKLLELQEVDSLLRGRQVRRFHVQLSNPKFGAHLGQPHSTTIIIRDPDELDRSFTSQMLSSQPPPHGDLGAPQNPNAKA AGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLA FNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLA TQPKRPMSIPIIPDIPIVDAQSGEDYDSFLMYSDDVLRSPSGSQRPSVSDDTEHLVNGRMDFAFPGSTNSLHRMTTTSAAAYGTHLSPHV PHRVLSTSSTLTRDYNSLTRSEHSHSTTLPRDYSTLTSVSSHDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLL NGGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVHPQSPLCPLPGSAFTLSTPSAPGPLVFTALSPDSL QLSWERPRRPNGDIVGYLVTCEMAQGGGPATAFRVDGDSPESRLTVPGLSENVPYKFKVQARTTEGFGPEREGIITIESQDGGPFPQLGS -------------------------------------------------------------- >83942_83942_5_SMARCC1-ITGB4_SMARCC1_chr3_47676680_ENST00000254480_ITGB4_chr17_73744922_ENST00000579662_length(transcript)=4963nt_BP=2766nt GGCTGGGCGGGGCCGGGAAGCGGCAGTGGCGGCTACGCGCGCGGGGGTGCGCGCGGGAACGACCGGGAAACACCGCGAGGGCCGGGGTGG GCCAGGCTGTGGGGACGACGGGCTGCGACGATGGCCGCAGCGGCGGGCGGCGGCGGGCCGGGGACAGCGGTAGGCGCCACGGGCTCGGGG ATTGCGGCGGCAGCCGCAGGCCTAGCTGTTTATCGACGGAAGGATGGGGGCCCGGCCACCAAGTTTTGGGAGAGCCCGGAGACGGTGTCC CAGCTGGATTCGGTGCGGGTCTGGCTGGGCAAGCACTACAAGAAGTATGTTCATGCGGATGCTCCTACCAATAAAACACTGGCTGGGCTG GTGGTGCAGCTTCTTCAGTTCCAGGAAGATGCCTTTGGGAAGCATGTCACCAACCCGGCCTTCACCAAACTCCCTGCAAAGTGTTTCATG GATTTCAAAGCTGGAGGCGCCTTATGTCACATTCTTGGGGCTGCTTACAAGTATAAAAATGAACAGGGATGGCGGAGGTTTGACCTACAG AACCCATCTCGAATGGATCGTAATGTGGAAATGTTTATGAACATTGAAAAAACATTGGTGCAGAACAATTGTTTGACCAGACCCAACATC TACCTCATTCCAGACATTGATCTGAAGTTGGCTAACAAATTGAAAGATATCATCAAACGACATCAGGGAACATTTACGGATGAGAAGTCA AAAGCTTCCCACCACATTTACCCATATTCTTCCTCACAAGACGATGAAGAATGGTTGAGACCGGTGATGAGAAAAGAGAAGCAAGTGTTA GTGCATTGGGGCTTTTACCCAGACAGCTATGATACTTGGGTCCATAGTAATGATGTTGATGCTGAAATTGAAGATCCACCAATTCCAGAA AAACCATGGAAGGTTCATGTGAAATGGATTTTGGACACTGATATTTTCAATGAATGGATGAATGAGGAGGATTATGAGGTGGATGAAAAT AGGAAGCCTGTGAGTTTTCGTCAGCGGATTTCAACCAAGAATGAAGAGCCAGTCAGAAGTCCAGAAAGAAGAGATAGAAAAGCATCAGCT AATGCTCGAAAGAGGAAACATTCGCCTTCGCCTCCCCCTCCGACACCAACAGAATCACGGAAGAAGAGTGGGAAGAAAGGCCAAGCTAGC CTTTATGGGAAGCGCAGAAGTCAGAAAGAGGAAGATGAGCAAGAAGATCTAACCAAGGATATGGAAGACCCAACACCTGTACCCAATATA GAAGAAGTAGTACTTCCCAAAAATGTGAACCTAAAGAAAGATAGTGAAAATACACCTGTTAAAGGAGGAACTGTAGCGGATCTAGATGAG CAGGATGAAGAAACAGTCACAGCAGGAGGAAAGGAAGATGAAGATCCTGCCAAAGGTGATCAGAGTCGATCAGTTGACCTTGGGGAAGAT AATGTGACAGAGCAGACCAATCACATTATTATTCCTAGTTATGCATCATGGTTTGATTATAACTGTATTCATGTGATTGAACGGCGTGCT CTTCCTGAGTTCTTCAATGGAAAAAACAAATCCAAGACTCCAGAAATATACTTGGCATATCGAAATTTTATGATTGACACGTATCGTCTA AACCCCCAAGAGTATTTAACTAGCACTGCTTGTCGGAGGAACTTGACTGGAGATGTGTGTGCTGTGATGAGGGTCCATGCCTTTTTAGAG CAGTGGGGACTCGTTAATTACCAAGTTGACCCGGAAAGTAGACCCATGGCAATGGGACCTCCTCCTACTCCTCATTTTAATGTATTAGCT GATACCCCCTCTGGGCTTGTGCCTCTGCATCTTCGATCACCTCAGGTTCCTGCTGCTCAACAGATGCTAAATTTTCCTGAGAAAAACAAG GAAAAACCAGTTGATTTGCAGAACTTTGGTCTCCGTACTGACATTTACTCCAAGAAAACATTAGCAAAGAGTAAAGGTGCTAGTGCTGGA AGAGAATGGACTGAACAGGAGACCCTTCTACTCCTGGAGGCCCTGGAGATGTACAAGGATGATTGGAACAAAGTGTCGGAACATGTTGGA AGTCGTACTCAGGATGAATGCATCCTCCACTTTTTGAGACTTCCCATTGAGGACCCATACCTTGAGAATTCAGATGCTTCCCTTGGGCCT TTGGCCTACCAGCCTGTCCCCTTCAGTCAGTCAGGAAATCCAGTTATGAGTACTGTTGCTTTTTTGGCATCTGTGGTGGACCCTCGCGTG GCATCTGCTGCAGCAAAAGCGGCTTTGGAGGAGTTTTCTCGGGTCCGGGAGGAGGTACCACTGGAATTGGTTGAAGCTCATGTCAAGAAA GTACAAGAAGCAGCACGAGCCTCTGGGAAAGTGGATCCCACCTACGGTCTGGAGAGCAGCTGCATTGCAGGCACAGGGCCCGATGAGCCA GAGAAGCTTGAAGGAGCTGAAGAGGAAAAAATGGAAGCCGACCCTGATGGTCAGCAGCCTGAAAAGGCAGAAAATAAAGTGGAAAATGAA ACGGATGAAGGTGATAAAGCACAAGATGGAGAAAATGAAAAAAATAGTGAAAAGGAACAGGATAGTGAAGTGAGTGAGGATACCAAATCA GAAGAAAAGGAGACTGAAGAGAACAAAGAACTCACTGATACATGTAAAGAAAGAGAAAGTGATACTGGGAAGAAGAAAGTAGAACATGAA ATTTCCGAAGGAAATGTTGCCACAGCCGCAGCAGCTGCTCTTGCCTCAGCGGCTACCAAAGCCAAGGACTACATCCCCGTGGAGGGTGAG CTGCTGTTCCAGCCTGGGGAGGCCTGGAAAGAGCTGCAGGTGAAGCTCCTGGAGCTGCAAGAAGTTGACTCCCTCCTGCGGGGCCGCCAG GTCCGCCGTTTCCACGTCCAGCTCAGCAACCCTAAGTTTGGGGCCCACCTGGGCCAGCCCCACTCCACCACCATCATCATCAGGGACCCA GATGAACTGGACCGGAGCTTCACGAGTCAGATGTTGTCATCACAGCCACCCCCTCACGGCGACCTGGGCGCCCCGCAGAACCCCAATGCT AAGGCCGCTGGGTCCAGGAAGATCCATTTCAACTGGCTGCCCCCTTCTGGCAAGCCAATGGGGTACAGGGTAAAGTACTGGATTCAGGGT GACTCCGAATCCGAAGCCCACCTGCTCGACAGCAAGGTGCCCTCAGTGGAGCTCACCAACCTGTACCCGTATTGCGACTATGAGATGAAG GTGTGCGCCTACGGGGCTCAGGGCGAGGGACCCTACAGCTCCCTGGTGTCCTGCCGCACCCACCAGGAAGTGCCCAGCGAGCCAGGGCGT CTGGCCTTCAATGTCGTCTCCTCCACGGTGACCCAGCTGAGCTGGGCTGAGCCGGCTGAGACCAACGGTGAGATCACAGCCTACGAGGTC TGCTATGGCCTGGTCAACGATGACAACCGACCTATTGGGCCCATGAAGAAAGTGCTGGTTGACAACCCTAAGAACCGGATGCTGCTTATT GAGAACCTTCGGGAGTCCCAGCCCTACCGCTACACGGTGAAGGCGCGCAACGGGGCCGGCTGGGGGCCTGAGCGGGAGGCCATCATCAAC CTGGCCACCCAGCCCAAGAGGCCCATGTCCATCCCCATCATCCCTGACATCCCTATCGTGGACGCCCAGAGCGGGGAGGACTACGACAGC TTCCTTATGTACAGCGATGACGTTCTACGCTCTCCATCGGGCAGCCAGAGGCCCAGCGTCTCCGATGACACTGAGCACCTGGTGAATGGC CGGATGGACTTTGCCTTCCCGGGCAGCACCAACTCCCTGCACAGGATGACCACGACCAGTGCTGCTGCCTATGGCACCCACCTGAGCCCA CACGTGCCCCACCGCGTGCTAAGCACATCCTCCACCCTCACACGGGACTACAACTCACTGACCCGCTCAGAACACTCACACTCGACCACA CTGCCCAGGGACTACTCCACCCTCACCTCCGTCTCCTCCCACGACTCTCGCCTGACTGCTGGTGTGCCCGACACGCCCACCCGCCTGGTG TTCTCTGCCCTGGGGCCCACATCTCTCAGAGTGAGCTGGCAGGAGCCGCGGTGCGAGCGGCCGCTGCAGGGCTACAGTGTGGAGTACCAG CTGCTGAACGGCGGTGAGCTGCATCGGCTCAACATCCCCAACCCTGCCCAGACCTCGGTGGTGGTGGAAGACCTCCTGCCCAACCACTCC TACGTGTTCCGCGTGCGGGCCCAGAGCCAGGAAGGCTGGGGCCGAGAGCGTGAGGGTGTCATCACCATTGAATCCCAGGTGCACCCGCAG AGCCCACTGTGTCCCCTGCCAGGCTCCGCCTTCACTTTGAGCACTCCCAGTGCCCCAGGCCCGCTGGTGTTCACTGCCCTGAGCCCAGAC TCGCTGCAGCTGAGCTGGGAGCGGCCACGGAGGCCCAATGGGGATATCGTCGGCTACCTGGTGACCTGTGAGATGGCCCAAGGAGGAGGG CCAGCCACCGCATTCCGGGTGGATGGAGACAGCCCCGAGAGCCGGCTGACCGTGCCGGGCCTCAGCGAGAACGTGCCCTACAAGTTCAAG GTGCAGGCCAGGACCACTGAGGGCTTCGGGCCAGAGCGCGAGGGCATCATCACCATAGAGTCCCAGGATGGAGGACCCTTCCCGCAGCTG GGCAGCCGTGCCGGGCTCTTCCAGCACCCGCTGCAAAGCGAGTACAGCAGCATCACCACCACCCACACCAGCGCCACCGAGCCCTTCCTA GTGGATGGGCTGACCCTGGGGGCCCAGCACCTGGAGGCAGGCGGCTCCCTCACCCGGCATGTGACCCAGGAGTTTGTGAGCCGGACACTG ACCACCAGCGGAACCCTTAGCACCCACATGGACCAACAGTTCTTCCAAACTTGACCGCACCCTGCCCCACCCCCGCCACGTCCCACTAGG >83942_83942_5_SMARCC1-ITGB4_SMARCC1_chr3_47676680_ENST00000254480_ITGB4_chr17_73744922_ENST00000579662_length(amino acids)=1605AA_BP=890 MWGRRAATMAAAAGGGGPGTAVGATGSGIAAAAAGLAVYRRKDGGPATKFWESPETVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVV QLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGALCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYL IPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQDDEEWLRPVMRKEKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKP WKVHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLY GKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKKDSENTPVKGGTVADLDEQDEETVTAGGKEDEDPAKGDQSRSVDLGEDNV TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQW GLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPVDLQNFGLRTDIYSKKTLAKSKGASAGRE WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVAS AAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMEADPDGQQPEKAENKVENETD EGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKELTDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKDYIPVEGELL FQPGEAWKELQVKLLELQEVDSLLRGRQVRRFHVQLSNPKFGAHLGQPHSTTIIIRDPDELDRSFTSQMLSSQPPPHGDLGAPQNPNAKA AGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLA FNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLA TQPKRPMSIPIIPDIPIVDAQSGEDYDSFLMYSDDVLRSPSGSQRPSVSDDTEHLVNGRMDFAFPGSTNSLHRMTTTSAAAYGTHLSPHV PHRVLSTSSTLTRDYNSLTRSEHSHSTTLPRDYSTLTSVSSHDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLL NGGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVHPQSPLCPLPGSAFTLSTPSAPGPLVFTALSPDSL QLSWERPRRPNGDIVGYLVTCEMAQGGGPATAFRVDGDSPESRLTVPGLSENVPYKFKVQARTTEGFGPEREGIITIESQDGGPFPQLGS -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for SMARCC1-ITGB4 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for SMARCC1-ITGB4 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for SMARCC1-ITGB4 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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