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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:SMARCE1-RARA (FusionGDB2 ID:83981)

Fusion Gene Summary for SMARCE1-RARA

check button Fusion gene summary
Fusion gene informationFusion gene name: SMARCE1-RARA
Fusion gene ID: 83981
HgeneTgene
Gene symbol

SMARCE1

RARA

Gene ID

6605

5914

Gene nameSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1retinoic acid receptor alpha
SynonymsBAF57|CSS5NR1B1|RAR
Cytomap

17q21.2

17q21.2

Type of geneprotein-codingprotein-coding
DescriptionSWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1BRG1-associated factor 57SWI/SNF-related matrix-associated actin-dependent regulator of chromatin e1chromatin remodeling complex BRG1-associated factor 57retinoic acid receptor alphaRAR-alphanuclear receptor subfamily 1 group B member 1nucleophosmin-retinoic acid receptor alpha fusion protein NPM-RAR long formretinoic acid nuclear receptor alpha variant 1retinoic acid nuclear receptor alpha variant 2
Modification date2020031320200327
UniProtAcc.

P10276

Ensembl transtripts involved in fusion geneENST00000348513, ENST00000377808, 
ENST00000400122, ENST00000431889, 
ENST00000544009, ENST00000578044, 
ENST00000580419, ENST00000474246, 
ENST00000420042, ENST00000254066, 
ENST00000394081, ENST00000394086, 
ENST00000394089, ENST00000425707, 
Fusion gene scores* DoF score3 X 5 X 3=4529 X 39 X 17=19227
# samples 555
** MAII scorelog2(5/45*10)=0.15200309344505
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0		log2(55/19227*10)=-5.12755824682814
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: SMARCE1 [Title/Abstract] AND RARA [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointSMARCE1(38792183)-RARA(38511515), # samples:2
Anticipated loss of major functional domain due to fusion event.SMARCE1-RARA seems lost the major protein functional domain in Hgene partner, which is a CGC due to the frame-shifted ORF.
SMARCE1-RARA seems lost the major protein functional domain in Hgene partner, which is a epigenetic factor due to the frame-shifted ORF.
SMARCE1-RARA seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
SMARCE1-RARA seems lost the major protein functional domain in Tgene partner, which is a CGC due to the frame-shifted ORF.
SMARCE1-RARA seems lost the major protein functional domain in Tgene partner, which is a epigenetic factor due to the frame-shifted ORF.
SMARCE1-RARA seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF.
SMARCE1-RARA seems lost the major protein functional domain in Tgene partner, which is a transcription factor due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneSMARCE1

GO:0006337

nucleosome disassembly

8895581

HgeneSMARCE1

GO:0006338

chromatin remodeling

11726552

HgeneSMARCE1

GO:0045892

negative regulation of transcription, DNA-templated

12192000

TgeneRARA

GO:0007165

signal transduction

2825025

TgeneRARA

GO:0030853

negative regulation of granulocyte differentiation

19917671

TgeneRARA

GO:0032689

negative regulation of interferon-gamma production

18416830

TgeneRARA

GO:0032720

negative regulation of tumor necrosis factor production

18416830

TgeneRARA

GO:0032736

positive regulation of interleukin-13 production

18416830

TgeneRARA

GO:0032753

positive regulation of interleukin-4 production

18416830

TgeneRARA

GO:0032754

positive regulation of interleukin-5 production

18416830

TgeneRARA

GO:0045630

positive regulation of T-helper 2 cell differentiation

18416830

TgeneRARA

GO:0045892

negative regulation of transcription, DNA-templated

20080953

TgeneRARA

GO:0045893

positive regulation of transcription, DNA-templated

18845237|19850744|20080953

TgeneRARA

GO:0045944

positive regulation of transcription by RNA polymerase II

19850744|21131358

TgeneRARA

GO:0071300

cellular response to retinoic acid

19917671

TgeneRARA

GO:0071391

cellular response to estrogen stimulus

20080953


check buttonFusion gene breakpoints across SMARCE1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across RARA (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4READTCGA-AH-6643-01ASMARCE1chr17

38792183

-RARAchr17

38511515

+
ChimerDB4READTCGA-AH-6643SMARCE1chr17

38792182

-RARAchr17

38511514

+


Top

Fusion Gene ORF analysis for SMARCE1-RARA

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-3UTRENST00000348513ENST00000420042SMARCE1chr17

38792183

-RARAchr17

38511515

+
5CDS-3UTRENST00000348513ENST00000420042SMARCE1chr17

38792182

-RARAchr17

38511514

+
5CDS-3UTRENST00000377808ENST00000420042SMARCE1chr17

38792183

-RARAchr17

38511515

+
5CDS-3UTRENST00000377808ENST00000420042SMARCE1chr17

38792182

-RARAchr17

38511514

+
5CDS-3UTRENST00000400122ENST00000420042SMARCE1chr17

38792183

-RARAchr17

38511515

+
5CDS-3UTRENST00000400122ENST00000420042SMARCE1chr17

38792182

-RARAchr17

38511514

+
5CDS-3UTRENST00000431889ENST00000420042SMARCE1chr17

38792183

-RARAchr17

38511515

+
5CDS-3UTRENST00000431889ENST00000420042SMARCE1chr17

38792182

-RARAchr17

38511514

+
5CDS-3UTRENST00000544009ENST00000420042SMARCE1chr17

38792183

-RARAchr17

38511515

+
5CDS-3UTRENST00000544009ENST00000420042SMARCE1chr17

38792182

-RARAchr17

38511514

+
5CDS-3UTRENST00000578044ENST00000420042SMARCE1chr17

38792183

-RARAchr17

38511515

+
5CDS-3UTRENST00000578044ENST00000420042SMARCE1chr17

38792182

-RARAchr17

38511514

+
5CDS-3UTRENST00000580419ENST00000420042SMARCE1chr17

38792183

-RARAchr17

38511515

+
5CDS-3UTRENST00000580419ENST00000420042SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000348513ENST00000254066SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000348513ENST00000254066SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000348513ENST00000394081SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000348513ENST00000394081SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000348513ENST00000394086SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000348513ENST00000394086SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000348513ENST00000394089SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000348513ENST00000394089SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000348513ENST00000425707SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000348513ENST00000425707SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000431889ENST00000254066SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000431889ENST00000254066SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000431889ENST00000394081SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000431889ENST00000394081SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000431889ENST00000394086SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000431889ENST00000394086SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000431889ENST00000394089SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000431889ENST00000394089SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000431889ENST00000425707SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000431889ENST00000425707SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000578044ENST00000254066SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000578044ENST00000254066SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000578044ENST00000394081SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000578044ENST00000394081SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000578044ENST00000394086SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000578044ENST00000394086SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000578044ENST00000394089SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000578044ENST00000394089SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000578044ENST00000425707SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000578044ENST00000425707SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000580419ENST00000254066SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000580419ENST00000254066SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000580419ENST00000394081SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000580419ENST00000394081SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000580419ENST00000394086SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000580419ENST00000394086SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000580419ENST00000394089SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000580419ENST00000394089SMARCE1chr17

38792182

-RARAchr17

38511514

+
Frame-shiftENST00000580419ENST00000425707SMARCE1chr17

38792183

-RARAchr17

38511515

+
Frame-shiftENST00000580419ENST00000425707SMARCE1chr17

38792182

-RARAchr17

38511514

+
In-frameENST00000377808ENST00000254066SMARCE1chr17

38792183

-RARAchr17

38511515

+
In-frameENST00000377808ENST00000254066SMARCE1chr17

38792182

-RARAchr17

38511514

+
In-frameENST00000377808ENST00000394081SMARCE1chr17

38792183

-RARAchr17

38511515

+
In-frameENST00000377808ENST00000394081SMARCE1chr17

38792182

-RARAchr17

38511514

+
In-frameENST00000377808ENST00000394086SMARCE1chr17

38792183

-RARAchr17

38511515

+
In-frameENST00000377808ENST00000394086SMARCE1chr17

38792182

-RARAchr17

38511514

+
In-frameENST00000377808ENST00000394089SMARCE1chr17

38792183

-RARAchr17

38511515

+
In-frameENST00000377808ENST00000394089SMARCE1chr17

38792182

-RARAchr17

38511514

+
In-frameENST00000377808ENST00000425707SMARCE1chr17

38792183

-RARAchr17

38511515

+
In-frameENST00000377808ENST00000425707SMARCE1chr17

38792182

-RARAchr17

38511514

+
In-frameENST00000400122ENST00000254066SMARCE1chr17

38792183

-RARAchr17

38511515

+
In-frameENST00000400122ENST00000254066SMARCE1chr17

38792182

-RARAchr17

38511514

+
In-frameENST00000400122ENST00000394081SMARCE1chr17

38792183

-RARAchr17

38511515

+
In-frameENST00000400122ENST00000394081SMARCE1chr17

38792182

-RARAchr17

38511514

+
In-frameENST00000400122ENST00000394086SMARCE1chr17

38792183

-RARAchr17

38511515

+
In-frameENST00000400122ENST00000394086SMARCE1chr17

38792182

-RARAchr17

38511514

+
In-frameENST00000400122ENST00000394089SMARCE1chr17

38792183

-RARAchr17

38511515

+
In-frameENST00000400122ENST00000394089SMARCE1chr17

38792182

-RARAchr17

38511514

+
In-frameENST00000400122ENST00000425707SMARCE1chr17

38792183

-RARAchr17

38511515

+
In-frameENST00000400122ENST00000425707SMARCE1chr17

38792182

-RARAchr17

38511514

+
In-frameENST00000544009ENST00000254066SMARCE1chr17

38792183

-RARAchr17

38511515

+
In-frameENST00000544009ENST00000254066SMARCE1chr17

38792182

-RARAchr17

38511514

+
In-frameENST00000544009ENST00000394081SMARCE1chr17

38792183

-RARAchr17

38511515

+
In-frameENST00000544009ENST00000394081SMARCE1chr17

38792182

-RARAchr17

38511514

+
In-frameENST00000544009ENST00000394086SMARCE1chr17

38792183

-RARAchr17

38511515

+
In-frameENST00000544009ENST00000394086SMARCE1chr17

38792182

-RARAchr17

38511514

+
In-frameENST00000544009ENST00000394089SMARCE1chr17

38792183

-RARAchr17

38511515

+
In-frameENST00000544009ENST00000394089SMARCE1chr17

38792182

-RARAchr17

38511514

+
In-frameENST00000544009ENST00000425707SMARCE1chr17

38792183

-RARAchr17

38511515

+
In-frameENST00000544009ENST00000425707SMARCE1chr17

38792182

-RARAchr17

38511514

+
intron-3CDSENST00000474246ENST00000254066SMARCE1chr17

38792183

-RARAchr17

38511515

+
intron-3CDSENST00000474246ENST00000254066SMARCE1chr17

38792182

-RARAchr17

38511514

+
intron-3CDSENST00000474246ENST00000394081SMARCE1chr17

38792183

-RARAchr17

38511515

+
intron-3CDSENST00000474246ENST00000394081SMARCE1chr17

38792182

-RARAchr17

38511514

+
intron-3CDSENST00000474246ENST00000394086SMARCE1chr17

38792183

-RARAchr17

38511515

+
intron-3CDSENST00000474246ENST00000394086SMARCE1chr17

38792182

-RARAchr17

38511514

+
intron-3CDSENST00000474246ENST00000394089SMARCE1chr17

38792183

-RARAchr17

38511515

+
intron-3CDSENST00000474246ENST00000394089SMARCE1chr17

38792182

-RARAchr17

38511514

+
intron-3CDSENST00000474246ENST00000425707SMARCE1chr17

38792183

-RARAchr17

38511515

+
intron-3CDSENST00000474246ENST00000425707SMARCE1chr17

38792182

-RARAchr17

38511514

+
intron-3UTRENST00000474246ENST00000420042SMARCE1chr17

38792183

-RARAchr17

38511515

+
intron-3UTRENST00000474246ENST00000420042SMARCE1chr17

38792182

-RARAchr17

38511514

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000544009SMARCE1chr1738792183-ENST00000254066RARAchr1738511515+1385438104814236
ENST00000544009SMARCE1chr1738792183-ENST00000394089RARAchr1738511515+920438104814236
ENST00000544009SMARCE1chr1738792183-ENST00000425707RARAchr1738511515+1431438104814236
ENST00000544009SMARCE1chr1738792183-ENST00000394086RARAchr1738511515+1384438104814236
ENST00000544009SMARCE1chr1738792183-ENST00000394081RARAchr1738511515+1384438104814236
ENST00000377808SMARCE1chr1738792183-ENST00000254066RARAchr1738511515+147452791903270
ENST00000377808SMARCE1chr1738792183-ENST00000394089RARAchr1738511515+100952791903270
ENST00000377808SMARCE1chr1738792183-ENST00000425707RARAchr1738511515+152052791903270
ENST00000377808SMARCE1chr1738792183-ENST00000394086RARAchr1738511515+147352791903270
ENST00000377808SMARCE1chr1738792183-ENST00000394081RARAchr1738511515+147352791903270
ENST00000400122SMARCE1chr1738792183-ENST00000254066RARAchr1738511515+1430483149859236
ENST00000400122SMARCE1chr1738792183-ENST00000394089RARAchr1738511515+965483149859236
ENST00000400122SMARCE1chr1738792183-ENST00000425707RARAchr1738511515+1476483149859236
ENST00000400122SMARCE1chr1738792183-ENST00000394086RARAchr1738511515+1429483149859236
ENST00000400122SMARCE1chr1738792183-ENST00000394081RARAchr1738511515+1429483149859236
ENST00000544009SMARCE1chr1738792182-ENST00000254066RARAchr1738511514+1385438104814236
ENST00000544009SMARCE1chr1738792182-ENST00000394089RARAchr1738511514+920438104814236
ENST00000544009SMARCE1chr1738792182-ENST00000425707RARAchr1738511514+1431438104814236
ENST00000544009SMARCE1chr1738792182-ENST00000394086RARAchr1738511514+1384438104814236
ENST00000544009SMARCE1chr1738792182-ENST00000394081RARAchr1738511514+1384438104814236
ENST00000377808SMARCE1chr1738792182-ENST00000254066RARAchr1738511514+147452791903270
ENST00000377808SMARCE1chr1738792182-ENST00000394089RARAchr1738511514+100952791903270
ENST00000377808SMARCE1chr1738792182-ENST00000425707RARAchr1738511514+152052791903270
ENST00000377808SMARCE1chr1738792182-ENST00000394086RARAchr1738511514+147352791903270
ENST00000377808SMARCE1chr1738792182-ENST00000394081RARAchr1738511514+147352791903270
ENST00000400122SMARCE1chr1738792182-ENST00000254066RARAchr1738511514+1430483149859236
ENST00000400122SMARCE1chr1738792182-ENST00000394089RARAchr1738511514+965483149859236
ENST00000400122SMARCE1chr1738792182-ENST00000425707RARAchr1738511514+1476483149859236
ENST00000400122SMARCE1chr1738792182-ENST00000394086RARAchr1738511514+1429483149859236
ENST00000400122SMARCE1chr1738792182-ENST00000394081RARAchr1738511514+1429483149859236

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000544009ENST00000254066SMARCE1chr1738792183-RARAchr1738511515+0.004756250.9952437
ENST00000544009ENST00000394089SMARCE1chr1738792183-RARAchr1738511515+0.0051354780.9948645
ENST00000544009ENST00000425707SMARCE1chr1738792183-RARAchr1738511515+0.0045824850.9954175
ENST00000544009ENST00000394086SMARCE1chr1738792183-RARAchr1738511515+0.0047626580.99523735
ENST00000544009ENST00000394081SMARCE1chr1738792183-RARAchr1738511515+0.0047626580.99523735
ENST00000377808ENST00000254066SMARCE1chr1738792183-RARAchr1738511515+0.0066819040.9933181
ENST00000377808ENST00000394089SMARCE1chr1738792183-RARAchr1738511515+0.0085222940.99147767
ENST00000377808ENST00000425707SMARCE1chr1738792183-RARAchr1738511515+0.0061513330.9938486
ENST00000377808ENST00000394086SMARCE1chr1738792183-RARAchr1738511515+0.0067163570.9932836
ENST00000377808ENST00000394081SMARCE1chr1738792183-RARAchr1738511515+0.0067163570.9932836
ENST00000400122ENST00000254066SMARCE1chr1738792183-RARAchr1738511515+0.0047136110.9952864
ENST00000400122ENST00000394089SMARCE1chr1738792183-RARAchr1738511515+0.0054022090.9945978
ENST00000400122ENST00000425707SMARCE1chr1738792183-RARAchr1738511515+0.0043668950.99563307
ENST00000400122ENST00000394086SMARCE1chr1738792183-RARAchr1738511515+0.0047211790.99527884
ENST00000400122ENST00000394081SMARCE1chr1738792183-RARAchr1738511515+0.0047211790.99527884
ENST00000544009ENST00000254066SMARCE1chr1738792182-RARAchr1738511514+0.004756250.9952437
ENST00000544009ENST00000394089SMARCE1chr1738792182-RARAchr1738511514+0.0051354780.9948645
ENST00000544009ENST00000425707SMARCE1chr1738792182-RARAchr1738511514+0.0045824850.9954175
ENST00000544009ENST00000394086SMARCE1chr1738792182-RARAchr1738511514+0.0047626580.99523735
ENST00000544009ENST00000394081SMARCE1chr1738792182-RARAchr1738511514+0.0047626580.99523735
ENST00000377808ENST00000254066SMARCE1chr1738792182-RARAchr1738511514+0.0066819040.9933181
ENST00000377808ENST00000394089SMARCE1chr1738792182-RARAchr1738511514+0.0085222940.99147767
ENST00000377808ENST00000425707SMARCE1chr1738792182-RARAchr1738511514+0.0061513330.9938486
ENST00000377808ENST00000394086SMARCE1chr1738792182-RARAchr1738511514+0.0067163570.9932836
ENST00000377808ENST00000394081SMARCE1chr1738792182-RARAchr1738511514+0.0067163570.9932836
ENST00000400122ENST00000254066SMARCE1chr1738792182-RARAchr1738511514+0.0047136110.9952864
ENST00000400122ENST00000394089SMARCE1chr1738792182-RARAchr1738511514+0.0054022090.9945978
ENST00000400122ENST00000425707SMARCE1chr1738792182-RARAchr1738511514+0.0043668950.99563307
ENST00000400122ENST00000394086SMARCE1chr1738792182-RARAchr1738511514+0.0047211790.99527884
ENST00000400122ENST00000394081SMARCE1chr1738792182-RARAchr1738511514+0.0047211790.99527884

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Fusion Genomic Features for SMARCE1-RARA


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
SMARCE1chr1738792182-RARAchr1738511514+1.67E-070.9999999
SMARCE1chr1738792182-RARAchr1738511514+1.67E-070.9999999
SMARCE1chr1738792182-RARAchr1738511514+1.67E-070.9999999
SMARCE1chr1738792182-RARAchr1738511514+1.67E-070.9999999

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

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Fusion Protein Features for SMARCE1-RARA


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr17:38792183/chr17:38511515)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.RARA

P10276

FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Receptor for retinoic acid (PubMed:19850744, PubMed:16417524, PubMed:20215566). Retinoic acid receptors bind as heterodimers to their target response elements in response to their ligands, all-trans or 9-cis retinoic acid, and regulate gene expression in various biological processes (PubMed:28167758). The RXR/RAR heterodimers bind to the retinoic acid response elements (RARE) composed of tandem 5'-AGGTCA-3' sites known as DR1-DR5 (PubMed:28167758, PubMed:19398580). In the absence of ligand, the RXR-RAR heterodimers associate with a multiprotein complex containing transcription corepressors that induce histone deacetylation, chromatin condensation and transcriptional suppression (PubMed:16417524). On ligand binding, the corepressors dissociate from the receptors and associate with the coactivators leading to transcriptional activation (PubMed:9267036, PubMed:19850744, PubMed:20215566). Formation of a complex with histone deacetylases might lead to inhibition of RARE DNA element binding and to transcriptional repression (PubMed:28167758). Transcriptional activation and RARE DNA element binding might be supported by the transcription factor KLF2 (PubMed:28167758). RARA plays an essential role in the regulation of retinoic acid-induced germ cell development during spermatogenesis (By similarity). Has a role in the survival of early spermatocytes at the beginning prophase of meiosis (By similarity). In Sertoli cells, may promote the survival and development of early meiotic prophase spermatocytes (By similarity). In concert with RARG, required for skeletal growth, matrix homeostasis and growth plate function (By similarity). Together with RXRA, positively regulates microRNA-10a expression, thereby inhibiting the GATA6/VCAM1 signaling response to pulsatile shear stress in vascular endothelial cells (PubMed:28167758). In association with HDAC3, HDAC5 and HDAC7 corepressors, plays a role in the repression of microRNA-10a and thereby promotes the inflammatory response (PubMed:28167758). {ECO:0000250|UniProtKB:P11416, ECO:0000269|PubMed:16417524, ECO:0000269|PubMed:19398580, ECO:0000269|PubMed:19850744, ECO:0000269|PubMed:20215566, ECO:0000269|PubMed:28167758, ECO:0000269|PubMed:9267036}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000348513-7115_65180412.0Compositional biasNote=Pro-rich
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000377808-6115_65145394.3333333333333Compositional biasNote=Pro-rich
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000400122-5105_65110359.3333333333333Compositional biasNote=Pro-rich
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000544009-485_65110342.0Compositional biasNote=Pro-rich
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000578044-595_65110342.0Compositional biasNote=Pro-rich
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000580419-6105_65145377.0Compositional biasNote=Pro-rich
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000348513-7115_65180412.0Compositional biasNote=Pro-rich
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000377808-6115_65145394.3333333333333Compositional biasNote=Pro-rich
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000400122-5105_65110359.3333333333333Compositional biasNote=Pro-rich
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000544009-485_65110342.0Compositional biasNote=Pro-rich
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000578044-595_65110342.0Compositional biasNote=Pro-rich
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000580419-6105_65145377.0Compositional biasNote=Pro-rich
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000348513-71166_134180412.0DNA bindingHMG box
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000377808-61166_134145394.3333333333333DNA bindingHMG box
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000580419-61066_134145377.0DNA bindingHMG box
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000348513-71166_134180412.0DNA bindingHMG box
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000377808-61166_134145394.3333333333333DNA bindingHMG box
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000580419-61066_134145377.0DNA bindingHMG box
TgeneRARAchr17:38792182chr17:38511514ENST0000025406669408_416337463.0Motif9aaTAD
TgeneRARAchr17:38792182chr17:38511514ENST0000039408158408_416332458.0Motif9aaTAD
TgeneRARAchr17:38792182chr17:38511514ENST0000039408969408_416337463.0Motif9aaTAD
TgeneRARAchr17:38792182chr17:38511514ENST0000042570747408_416240366.0Motif9aaTAD
TgeneRARAchr17:38792183chr17:38511515ENST0000025406669408_416337463.0Motif9aaTAD
TgeneRARAchr17:38792183chr17:38511515ENST0000039408158408_416332458.0Motif9aaTAD
TgeneRARAchr17:38792183chr17:38511515ENST0000039408969408_416337463.0Motif9aaTAD
TgeneRARAchr17:38792183chr17:38511515ENST0000042570747408_416240366.0Motif9aaTAD
TgeneRARAchr17:38792182chr17:38511514ENST0000025406669404_419337463.0RegionNote=Required for binding corepressor NCOR1
TgeneRARAchr17:38792182chr17:38511514ENST0000039408158404_419332458.0RegionNote=Required for binding corepressor NCOR1
TgeneRARAchr17:38792182chr17:38511514ENST0000039408969404_419337463.0RegionNote=Required for binding corepressor NCOR1
TgeneRARAchr17:38792182chr17:38511514ENST0000042570747404_419240366.0RegionNote=Required for binding corepressor NCOR1
TgeneRARAchr17:38792183chr17:38511515ENST0000025406669404_419337463.0RegionNote=Required for binding corepressor NCOR1
TgeneRARAchr17:38792183chr17:38511515ENST0000039408158404_419332458.0RegionNote=Required for binding corepressor NCOR1
TgeneRARAchr17:38792183chr17:38511515ENST0000039408969404_419337463.0RegionNote=Required for binding corepressor NCOR1
TgeneRARAchr17:38792183chr17:38511515ENST0000042570747404_419240366.0RegionNote=Required for binding corepressor NCOR1

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000348513-711220_319180412.0Coiled coilOntology_term=ECO:0000255
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000377808-611220_319145394.3333333333333Coiled coilOntology_term=ECO:0000255
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000400122-510220_319110359.3333333333333Coiled coilOntology_term=ECO:0000255
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000544009-48220_319110342.0Coiled coilOntology_term=ECO:0000255
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000578044-59220_319110342.0Coiled coilOntology_term=ECO:0000255
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000580419-610220_319145377.0Coiled coilOntology_term=ECO:0000255
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000348513-711220_319180412.0Coiled coilOntology_term=ECO:0000255
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000377808-611220_319145394.3333333333333Coiled coilOntology_term=ECO:0000255
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000400122-510220_319110359.3333333333333Coiled coilOntology_term=ECO:0000255
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000544009-48220_319110342.0Coiled coilOntology_term=ECO:0000255
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000578044-59220_319110342.0Coiled coilOntology_term=ECO:0000255
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000580419-610220_319145377.0Coiled coilOntology_term=ECO:0000255
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000348513-711320_411180412.0Compositional biasNote=Glu-rich
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000377808-611320_411145394.3333333333333Compositional biasNote=Glu-rich
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000400122-510320_411110359.3333333333333Compositional biasNote=Glu-rich
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000544009-48320_411110342.0Compositional biasNote=Glu-rich
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000578044-59320_411110342.0Compositional biasNote=Glu-rich
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000580419-610320_411145377.0Compositional biasNote=Glu-rich
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000348513-711320_411180412.0Compositional biasNote=Glu-rich
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000377808-611320_411145394.3333333333333Compositional biasNote=Glu-rich
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000400122-510320_411110359.3333333333333Compositional biasNote=Glu-rich
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000544009-48320_411110342.0Compositional biasNote=Glu-rich
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000578044-59320_411110342.0Compositional biasNote=Glu-rich
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000580419-610320_411145377.0Compositional biasNote=Glu-rich
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000400122-51066_134110359.3333333333333DNA bindingHMG box
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000544009-4866_134110342.0DNA bindingHMG box
HgeneSMARCE1chr17:38792182chr17:38511514ENST00000578044-5966_134110342.0DNA bindingHMG box
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000400122-51066_134110359.3333333333333DNA bindingHMG box
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000544009-4866_134110342.0DNA bindingHMG box
HgeneSMARCE1chr17:38792183chr17:38511515ENST00000578044-5966_134110342.0DNA bindingHMG box
TgeneRARAchr17:38792182chr17:38511514ENST000002540666988_153337463.0DNA bindingNuclear receptor
TgeneRARAchr17:38792182chr17:38511514ENST000003940815888_153332458.0DNA bindingNuclear receptor
TgeneRARAchr17:38792182chr17:38511514ENST000003940896988_153337463.0DNA bindingNuclear receptor
TgeneRARAchr17:38792182chr17:38511514ENST000004257074788_153240366.0DNA bindingNuclear receptor
TgeneRARAchr17:38792183chr17:38511515ENST000002540666988_153337463.0DNA bindingNuclear receptor
TgeneRARAchr17:38792183chr17:38511515ENST000003940815888_153332458.0DNA bindingNuclear receptor
TgeneRARAchr17:38792183chr17:38511515ENST000003940896988_153337463.0DNA bindingNuclear receptor
TgeneRARAchr17:38792183chr17:38511515ENST000004257074788_153240366.0DNA bindingNuclear receptor
TgeneRARAchr17:38792182chr17:38511514ENST0000025406669183_417337463.0DomainNR LBD
TgeneRARAchr17:38792182chr17:38511514ENST0000039408158183_417332458.0DomainNR LBD
TgeneRARAchr17:38792182chr17:38511514ENST0000039408969183_417337463.0DomainNR LBD
TgeneRARAchr17:38792182chr17:38511514ENST0000042570747183_417240366.0DomainNR LBD
TgeneRARAchr17:38792183chr17:38511515ENST0000025406669183_417337463.0DomainNR LBD
TgeneRARAchr17:38792183chr17:38511515ENST0000039408158183_417332458.0DomainNR LBD
TgeneRARAchr17:38792183chr17:38511515ENST0000039408969183_417337463.0DomainNR LBD
TgeneRARAchr17:38792183chr17:38511515ENST0000042570747183_417240366.0DomainNR LBD
TgeneRARAchr17:38792182chr17:38511514ENST0000025406669154_182337463.0RegionNote=Hinge
TgeneRARAchr17:38792182chr17:38511514ENST00000254066691_87337463.0RegionNote=Modulating
TgeneRARAchr17:38792182chr17:38511514ENST0000039408158154_182332458.0RegionNote=Hinge
TgeneRARAchr17:38792182chr17:38511514ENST00000394081581_87332458.0RegionNote=Modulating
TgeneRARAchr17:38792182chr17:38511514ENST0000039408969154_182337463.0RegionNote=Hinge
TgeneRARAchr17:38792182chr17:38511514ENST00000394089691_87337463.0RegionNote=Modulating
TgeneRARAchr17:38792182chr17:38511514ENST0000042570747154_182240366.0RegionNote=Hinge
TgeneRARAchr17:38792182chr17:38511514ENST00000425707471_87240366.0RegionNote=Modulating
TgeneRARAchr17:38792183chr17:38511515ENST0000025406669154_182337463.0RegionNote=Hinge
TgeneRARAchr17:38792183chr17:38511515ENST00000254066691_87337463.0RegionNote=Modulating
TgeneRARAchr17:38792183chr17:38511515ENST0000039408158154_182332458.0RegionNote=Hinge
TgeneRARAchr17:38792183chr17:38511515ENST00000394081581_87332458.0RegionNote=Modulating
TgeneRARAchr17:38792183chr17:38511515ENST0000039408969154_182337463.0RegionNote=Hinge
TgeneRARAchr17:38792183chr17:38511515ENST00000394089691_87337463.0RegionNote=Modulating
TgeneRARAchr17:38792183chr17:38511515ENST0000042570747154_182240366.0RegionNote=Hinge
TgeneRARAchr17:38792183chr17:38511515ENST00000425707471_87240366.0RegionNote=Modulating
TgeneRARAchr17:38792182chr17:38511514ENST0000025406669124_148337463.0Zinc fingerNR C4-type
TgeneRARAchr17:38792182chr17:38511514ENST000002540666988_108337463.0Zinc fingerNR C4-type
TgeneRARAchr17:38792182chr17:38511514ENST0000039408158124_148332458.0Zinc fingerNR C4-type
TgeneRARAchr17:38792182chr17:38511514ENST000003940815888_108332458.0Zinc fingerNR C4-type
TgeneRARAchr17:38792182chr17:38511514ENST0000039408969124_148337463.0Zinc fingerNR C4-type
TgeneRARAchr17:38792182chr17:38511514ENST000003940896988_108337463.0Zinc fingerNR C4-type
TgeneRARAchr17:38792182chr17:38511514ENST0000042570747124_148240366.0Zinc fingerNR C4-type
TgeneRARAchr17:38792182chr17:38511514ENST000004257074788_108240366.0Zinc fingerNR C4-type
TgeneRARAchr17:38792183chr17:38511515ENST0000025406669124_148337463.0Zinc fingerNR C4-type
TgeneRARAchr17:38792183chr17:38511515ENST000002540666988_108337463.0Zinc fingerNR C4-type
TgeneRARAchr17:38792183chr17:38511515ENST0000039408158124_148332458.0Zinc fingerNR C4-type
TgeneRARAchr17:38792183chr17:38511515ENST000003940815888_108332458.0Zinc fingerNR C4-type
TgeneRARAchr17:38792183chr17:38511515ENST0000039408969124_148337463.0Zinc fingerNR C4-type
TgeneRARAchr17:38792183chr17:38511515ENST000003940896988_108337463.0Zinc fingerNR C4-type
TgeneRARAchr17:38792183chr17:38511515ENST0000042570747124_148240366.0Zinc fingerNR C4-type
TgeneRARAchr17:38792183chr17:38511515ENST000004257074788_108240366.0Zinc fingerNR C4-type


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Fusion Gene Sequence for SMARCE1-RARA


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>83981_83981_1_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000377808_RARA_chr17_38511514_ENST00000254066_length(transcript)=1474nt_BP=527nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCC
ACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGA
GATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGA
GTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGA
AGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCT
GGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCA
CATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGAT
CCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCG
GGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCC
GTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCC
TGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGG
CCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGG
ATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCC
CCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGG
GGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTTT

>83981_83981_1_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000377808_RARA_chr17_38511514_ENST00000254066_length(amino acids)=270AA_BP=145
MSKRPSYAPPPTPAPATASSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE
YNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPH
MFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPATHSP

--------------------------------------------------------------
>83981_83981_2_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000377808_RARA_chr17_38511514_ENST00000394081_length(transcript)=1473nt_BP=527nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCC
ACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGA
GATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGA
GTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGA
AGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCT
GGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCA
CATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGAT
CCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCG
GGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCC
GTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCC
TGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGG
CCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGG
ATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCC
CCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGG
GGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTTT

>83981_83981_2_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000377808_RARA_chr17_38511514_ENST00000394081_length(amino acids)=270AA_BP=145
MSKRPSYAPPPTPAPATASSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE
YNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPH
MFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPATHSP

--------------------------------------------------------------
>83981_83981_3_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000377808_RARA_chr17_38511514_ENST00000394086_length(transcript)=1473nt_BP=527nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCC
ACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGA
GATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGA
GTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGA
AGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCT
GGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCA
CATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGAT
CCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCG
GGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCC
GTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCC
TGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGG
CCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGG
ATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCC
CCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGG
GGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTTT

>83981_83981_3_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000377808_RARA_chr17_38511514_ENST00000394086_length(amino acids)=270AA_BP=145
MSKRPSYAPPPTPAPATASSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE
YNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPH
MFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPATHSP

--------------------------------------------------------------
>83981_83981_4_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000377808_RARA_chr17_38511514_ENST00000394089_length(transcript)=1009nt_BP=527nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCC
ACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGA
GATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGA
GTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGA
AGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCT
GGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCA
CATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGAT
CCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCG
GGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCC
GTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCC

>83981_83981_4_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000377808_RARA_chr17_38511514_ENST00000394089_length(amino acids)=270AA_BP=145
MSKRPSYAPPPTPAPATASSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE
YNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPH
MFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPATHSP

--------------------------------------------------------------
>83981_83981_5_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000377808_RARA_chr17_38511514_ENST00000425707_length(transcript)=1520nt_BP=527nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCC
ACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGA
GATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGA
GTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGA
AGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCT
GGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCA
CATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGAT
CCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCG
GGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCC
GTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCC
TGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGG
CCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGG
ATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCC
CCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGG
GGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTTT

>83981_83981_5_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000377808_RARA_chr17_38511514_ENST00000425707_length(amino acids)=270AA_BP=145
MSKRPSYAPPPTPAPATASSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE
YNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPH
MFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPATHSP

--------------------------------------------------------------
>83981_83981_6_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000400122_RARA_chr17_38511514_ENST00000254066_length(transcript)=1430nt_BP=483nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCCACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGG
TCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATG
AAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGAGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACC
TTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGAAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGT
ACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGG
AGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCA
TCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGATCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACT
CAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCGGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCA
GCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCC
GGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGG
GGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGGCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGA
GGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGGATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCC
AGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACC
TCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGGGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAG

>83981_83981_6_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000400122_RARA_chr17_38511514_ENST00000254066_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_7_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000400122_RARA_chr17_38511514_ENST00000394081_length(transcript)=1429nt_BP=483nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCCACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGG
TCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATG
AAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGAGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACC
TTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGAAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGT
ACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGG
AGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCA
TCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGATCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACT
CAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCGGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCA
GCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCC
GGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGG
GGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGGCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGA
GGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGGATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCC
AGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACC
TCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGGGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAG

>83981_83981_7_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000400122_RARA_chr17_38511514_ENST00000394081_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_8_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000400122_RARA_chr17_38511514_ENST00000394086_length(transcript)=1429nt_BP=483nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCCACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGG
TCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATG
AAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGAGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACC
TTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGAAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGT
ACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGG
AGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCA
TCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGATCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACT
CAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCGGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCA
GCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCC
GGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGG
GGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGGCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGA
GGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGGATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCC
AGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACC
TCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGGGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAG

>83981_83981_8_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000400122_RARA_chr17_38511514_ENST00000394086_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_9_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000400122_RARA_chr17_38511514_ENST00000394089_length(transcript)=965nt_BP=483nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCCACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGG
TCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATG
AAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGAGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACC
TTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGAAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGT
ACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGG
AGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCA
TCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGATCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACT
CAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCGGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCA
GCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCC

>83981_83981_9_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000400122_RARA_chr17_38511514_ENST00000394089_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_10_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000400122_RARA_chr17_38511514_ENST00000425707_length(transcript)=1476nt_BP=483nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCCACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGG
TCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATG
AAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGAGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACC
TTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGAAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGT
ACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGG
AGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCA
TCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGATCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACT
CAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCGGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCA
GCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCC
GGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGG
GGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGGCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGA
GGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGGATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCC
AGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACC
TCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGGGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAG
GTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTTTGATTTTTTTAATAAGAATTTTCATTTTAAGCACATTTATACTGA

>83981_83981_10_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000400122_RARA_chr17_38511514_ENST00000425707_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_11_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000544009_RARA_chr17_38511514_ENST00000254066_length(transcript)=1385nt_BP=438nt
GTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAAAATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGC
CACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGG
AGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAG
AGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGG
AAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACC
TGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCC
ACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGA
TCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGC
GGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCC
CGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCC
CTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGG
GCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAG
GATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCC
CCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAG
GGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTT

>83981_83981_11_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000544009_RARA_chr17_38511514_ENST00000254066_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_12_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000544009_RARA_chr17_38511514_ENST00000394081_length(transcript)=1384nt_BP=438nt
GTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAAAATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGC
CACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGG
AGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAG
AGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGG
AAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACC
TGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCC
ACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGA
TCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGC
GGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCC
CGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCC
CTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGG
GCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAG
GATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCC
CCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAG
GGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTT

>83981_83981_12_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000544009_RARA_chr17_38511514_ENST00000394081_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_13_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000544009_RARA_chr17_38511514_ENST00000394086_length(transcript)=1384nt_BP=438nt
GTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAAAATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGC
CACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGG
AGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAG
AGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGG
AAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACC
TGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCC
ACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGA
TCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGC
GGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCC
CGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCC
CTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGG
GCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAG
GATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCC
CCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAG
GGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTT

>83981_83981_13_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000544009_RARA_chr17_38511514_ENST00000394086_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_14_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000544009_RARA_chr17_38511514_ENST00000394089_length(transcript)=920nt_BP=438nt
GTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAAAATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGC
CACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGG
AGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAG
AGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGG
AAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACC
TGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCC
ACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGA
TCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGC
GGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCC
CGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCC

>83981_83981_14_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000544009_RARA_chr17_38511514_ENST00000394089_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_15_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000544009_RARA_chr17_38511514_ENST00000425707_length(transcript)=1431nt_BP=438nt
GTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAAAATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGC
CACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGG
AGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAG
AGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGG
AAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACC
TGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCC
ACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGA
TCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGC
GGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCC
CGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCC
CTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGG
GCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAG
GATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCC
CCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAG
GGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTT

>83981_83981_15_SMARCE1-RARA_SMARCE1_chr17_38792182_ENST00000544009_RARA_chr17_38511514_ENST00000425707_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_16_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000377808_RARA_chr17_38511515_ENST00000254066_length(transcript)=1474nt_BP=527nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCC
ACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGA
GATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGA
GTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGA
AGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCT
GGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCA
CATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGAT
CCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCG
GGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCC
GTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCC
TGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGG
CCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGG
ATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCC
CCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGG
GGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTTT

>83981_83981_16_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000377808_RARA_chr17_38511515_ENST00000254066_length(amino acids)=270AA_BP=145
MSKRPSYAPPPTPAPATASSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE
YNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPH
MFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPATHSP

--------------------------------------------------------------
>83981_83981_17_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000377808_RARA_chr17_38511515_ENST00000394081_length(transcript)=1473nt_BP=527nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCC
ACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGA
GATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGA
GTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGA
AGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCT
GGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCA
CATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGAT
CCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCG
GGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCC
GTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCC
TGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGG
CCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGG
ATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCC
CCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGG
GGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTTT

>83981_83981_17_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000377808_RARA_chr17_38511515_ENST00000394081_length(amino acids)=270AA_BP=145
MSKRPSYAPPPTPAPATASSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE
YNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPH
MFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPATHSP

--------------------------------------------------------------
>83981_83981_18_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000377808_RARA_chr17_38511515_ENST00000394086_length(transcript)=1473nt_BP=527nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCC
ACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGA
GATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGA
GTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGA
AGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCT
GGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCA
CATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGAT
CCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCG
GGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCC
GTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCC
TGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGG
CCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGG
ATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCC
CCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGG
GGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTTT

>83981_83981_18_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000377808_RARA_chr17_38511515_ENST00000394086_length(amino acids)=270AA_BP=145
MSKRPSYAPPPTPAPATASSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE
YNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPH
MFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPATHSP

--------------------------------------------------------------
>83981_83981_19_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000377808_RARA_chr17_38511515_ENST00000394089_length(transcript)=1009nt_BP=527nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCC
ACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGA
GATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGA
GTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGA
AGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCT
GGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCA
CATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGAT
CCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCG
GGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCC
GTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCC

>83981_83981_19_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000377808_RARA_chr17_38511515_ENST00000394089_length(amino acids)=270AA_BP=145
MSKRPSYAPPPTPAPATASSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE
YNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPH
MFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPATHSP

--------------------------------------------------------------
>83981_83981_20_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000377808_RARA_chr17_38511515_ENST00000425707_length(transcript)=1520nt_BP=527nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCC
ACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGA
GATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGA
GTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGA
AGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCT
GGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCA
CATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGAT
CCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCG
GGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCC
GTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCC
TGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGG
CCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGG
ATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCC
CCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGG
GGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTTT

>83981_83981_20_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000377808_RARA_chr17_38511515_ENST00000425707_length(amino acids)=270AA_BP=145
MSKRPSYAPPPTPAPATASSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE
YNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPH
MFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPATHSP

--------------------------------------------------------------
>83981_83981_21_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000400122_RARA_chr17_38511515_ENST00000254066_length(transcript)=1430nt_BP=483nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCCACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGG
TCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATG
AAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGAGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACC
TTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGAAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGT
ACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGG
AGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCA
TCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGATCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACT
CAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCGGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCA
GCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCC
GGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGG
GGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGGCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGA
GGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGGATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCC
AGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACC
TCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGGGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAG

>83981_83981_21_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000400122_RARA_chr17_38511515_ENST00000254066_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_22_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000400122_RARA_chr17_38511515_ENST00000394081_length(transcript)=1429nt_BP=483nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCCACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGG
TCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATG
AAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGAGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACC
TTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGAAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGT
ACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGG
AGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCA
TCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGATCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACT
CAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCGGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCA
GCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCC
GGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGG
GGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGGCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGA
GGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGGATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCC
AGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACC
TCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGGGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAG

>83981_83981_22_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000400122_RARA_chr17_38511515_ENST00000394081_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_23_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000400122_RARA_chr17_38511515_ENST00000394086_length(transcript)=1429nt_BP=483nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCCACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGG
TCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATG
AAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGAGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACC
TTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGAAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGT
ACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGG
AGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCA
TCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGATCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACT
CAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCGGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCA
GCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCC
GGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGG
GGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGGCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGA
GGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGGATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCC
AGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACC
TCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGGGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAG

>83981_83981_23_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000400122_RARA_chr17_38511515_ENST00000394086_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_24_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000400122_RARA_chr17_38511515_ENST00000394089_length(transcript)=965nt_BP=483nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCCACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGG
TCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATG
AAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGAGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACC
TTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGAAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGT
ACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGG
AGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCA
TCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGATCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACT
CAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCGGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCA
GCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCC

>83981_83981_24_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000400122_RARA_chr17_38511515_ENST00000394089_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_25_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000400122_RARA_chr17_38511515_ENST00000425707_length(transcript)=1476nt_BP=483nt
CAAAGGGAAGCGAAGCCGGAGCTGCGGGCGCTTTTTCTGCCCGCGGTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAA
AATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGCCACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGG
TCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATG
AAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGAGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACC
TTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGAAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGT
ACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGG
AGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCA
TCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGATCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACT
CAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGCGGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCA
GCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCC
GGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGG
GGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGGGCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGA
GGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAGGATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCC
AGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACC
TCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAGGGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAG
GTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTTTGATTTTTTTAATAAGAATTTTCATTTTAAGCACATTTATACTGA

>83981_83981_25_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000400122_RARA_chr17_38511515_ENST00000425707_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_26_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000544009_RARA_chr17_38511515_ENST00000254066_length(transcript)=1385nt_BP=438nt
GTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAAAATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGC
CACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGG
AGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAG
AGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGG
AAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACC
TGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCC
ACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGA
TCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGC
GGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCC
CGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCC
CTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGG
GCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAG
GATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCC
CCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAG
GGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTT

>83981_83981_26_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000544009_RARA_chr17_38511515_ENST00000254066_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_27_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000544009_RARA_chr17_38511515_ENST00000394081_length(transcript)=1384nt_BP=438nt
GTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAAAATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGC
CACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGG
AGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAG
AGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGG
AAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACC
TGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCC
ACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGA
TCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGC
GGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCC
CGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCC
CTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGG
GCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAG
GATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCC
CCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAG
GGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTT

>83981_83981_27_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000544009_RARA_chr17_38511515_ENST00000394081_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_28_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000544009_RARA_chr17_38511515_ENST00000394086_length(transcript)=1384nt_BP=438nt
GTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAAAATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGC
CACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGG
AGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAG
AGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGG
AAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACC
TGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCC
ACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGA
TCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGC
GGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCC
CGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCC
CTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGG
GCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAG
GATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCC
CCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAG
GGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTT

>83981_83981_28_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000544009_RARA_chr17_38511515_ENST00000394086_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_29_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000544009_RARA_chr17_38511515_ENST00000394089_length(transcript)=920nt_BP=438nt
GTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAAAATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGC
CACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGG
AGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAG
AGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGG
AAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACC
TGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCC
ACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGA
TCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGC
GGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCC
CGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCC

>83981_83981_29_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000544009_RARA_chr17_38511515_ENST00000394089_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

--------------------------------------------------------------
>83981_83981_30_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000544009_RARA_chr17_38511515_ENST00000425707_length(transcript)=1431nt_BP=438nt
GTGTCTCAGATTCATTCTTAAGGAACTGAGAACTTAATCTTCCAAAATGTCAAGCATCCTCTGGTATCACGATTCCAAAACCCCCAAAGC
CACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTCTGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGG
AGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAG
AGTACAATGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGG
AAGAAAGTCGACAGAGACAATCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGACCGCCAGGACC
TGGAGCAGCCGGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGAGGCGCTAAAGGTCTACGTGCGGAAGCGGAGGCCCAGCCGCCCCC
ACATGTTCCCCAAGATGCTAATGAAGATTACTGACCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGA
TCCCGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGGGC
GGGACGGGGGTGGCCTGGCCCCCCCGCCAGGCAGCTGTAGCCCCAGCCTCAGCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACTCCC
CGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCC
CTGCCCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTCCCTGGGGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACAGAGGCCTGG
GCCCTCAGTGGACTGCCTGCTCCCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCCTGGGTCTCAG
GATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCC
CCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAACCTCCCCCCTGCCTCGGTTGGTGACAGAGGGGGTGGGACAG
GGGCGGGGGGTTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTTTTATTTTAATTTTTTTGTTT

>83981_83981_30_SMARCE1-RARA_SMARCE1_chr17_38792183_ENST00000544009_RARA_chr17_38511515_ENST00000425707_length(amino acids)=236AA_BP=111
MMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSM

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Fusion Gene PPI Analysis for SMARCE1-RARA


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for SMARCE1-RARA


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for SMARCE1-RARA


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource