|
||||||
|
 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:SNRPF-NT5DC3 (FusionGDB2 ID:84800) |
Fusion Gene Summary for SNRPF-NT5DC3 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: SNRPF-NT5DC3 | Fusion gene ID: 84800 | Hgene | Tgene | Gene symbol | SNRPF | NT5DC3 | Gene ID | 6636 | 51559 |
| Gene name | small nuclear ribonucleoprotein polypeptide F | 5'-nucleotidase domain containing 3 | |
| Synonyms | SMF|Sm-F|snRNP-F | TU12B1-TY|TU12B1TY | |
| Cytomap | 12q23.1 | 12q23.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | small nuclear ribonucleoprotein Fsm protein F | 5'-nucleotidase domain-containing protein 3 | |
| Modification date | 20200313 | 20200313 | |
| UniProtAcc | . | . | |
| Ensembl transtripts involved in fusion gene | ENST00000266735, ENST00000552085, ENST00000553192, | ENST00000465502, ENST00000392876, | |
| Fusion gene scores | * DoF score | 3 X 3 X 2=18 | 4 X 3 X 3=36 |
| # samples | 3 | 4 | |
| ** MAII score | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(4/36*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: SNRPF [Title/Abstract] AND NT5DC3 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | SNRPF(96255071)-NT5DC3(104190809), # samples:1 | ||
| Anticipated loss of major functional domain due to fusion event. | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | SNRPF | GO:0000387 | spliceosomal snRNP assembly | 18984161 |
| Hgene | SNRPF | GO:0000398 | mRNA splicing, via spliceosome | 28076346 |
| Fusion gene breakpoints across SNRPF (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
 |
| Fusion gene breakpoints across NT5DC3 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
 |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | STAD | TCGA-BR-8078-01A | SNRPF | chr12 | 96255071 | + | NT5DC3 | chr12 | 104190809 | - |
Top |
Fusion Gene ORF analysis for SNRPF-NT5DC3 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 5CDS-5UTR | ENST00000266735 | ENST00000465502 | SNRPF | chr12 | 96255071 | + | NT5DC3 | chr12 | 104190809 | - |
| 5CDS-5UTR | ENST00000552085 | ENST00000465502 | SNRPF | chr12 | 96255071 | + | NT5DC3 | chr12 | 104190809 | - |
| 5CDS-5UTR | ENST00000553192 | ENST00000465502 | SNRPF | chr12 | 96255071 | + | NT5DC3 | chr12 | 104190809 | - |
| In-frame | ENST00000266735 | ENST00000392876 | SNRPF | chr12 | 96255071 | + | NT5DC3 | chr12 | 104190809 | - |
| In-frame | ENST00000552085 | ENST00000392876 | SNRPF | chr12 | 96255071 | + | NT5DC3 | chr12 | 104190809 | - |
| In-frame | ENST00000553192 | ENST00000392876 | SNRPF | chr12 | 96255071 | + | NT5DC3 | chr12 | 104190809 | - |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000266735 | SNRPF | chr12 | 96255071 | + | ENST00000392876 | NT5DC3 | chr12 | 104190809 | - | 6826 | 275 | 44 | 1306 | 420 |
| ENST00000553192 | SNRPF | chr12 | 96255071 | + | ENST00000392876 | NT5DC3 | chr12 | 104190809 | - | 6789 | 238 | 7 | 1269 | 420 |
| ENST00000552085 | SNRPF | chr12 | 96255071 | + | ENST00000392876 | NT5DC3 | chr12 | 104190809 | - | 6785 | 234 | 3 | 1265 | 420 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000266735 | ENST00000392876 | SNRPF | chr12 | 96255071 | + | NT5DC3 | chr12 | 104190809 | - | 0.000400353 | 0.99959964 |
| ENST00000553192 | ENST00000392876 | SNRPF | chr12 | 96255071 | + | NT5DC3 | chr12 | 104190809 | - | 0.000407609 | 0.99959236 |
| ENST00000552085 | ENST00000392876 | SNRPF | chr12 | 96255071 | + | NT5DC3 | chr12 | 104190809 | - | 0.000408004 | 0.999592 |
Top |
Fusion Genomic Features for SNRPF-NT5DC3 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
 |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for SNRPF-NT5DC3 |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr12:96255071/chr12:104190809) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | . |
| FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | NT5DC3 | chr12:96255071 | chr12:104190809 | ENST00000392876 | 4 | 14 | 251_259 | 205 | 549.0 | Region | Substrate binding |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | NT5DC3 | chr12:96255071 | chr12:104190809 | ENST00000392876 | 4 | 14 | 4_7 | 205 | 549.0 | Compositional bias | Note=Poly-Ala |
Top |
Fusion Gene Sequence for SNRPF-NT5DC3 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >84800_84800_1_SNRPF-NT5DC3_SNRPF_chr12_96255071_ENST00000266735_NT5DC3_chr12_104190809_ENST00000392876_length(transcript)=6826nt_BP=275nt GGTGGGAGGTGAAAGGTCATAGTCCTGTTTGGCGGCCATTTCTCTTGAAACTGCGGCTCGGGACCTGCGGTACCTGCTGTAGTCACGAGG GACGGGCGGCGGCCTGGTCGGCAGAGAGTAGCCTGCAACATTCGGCCGTGGTTACGATGAGTTTACCCCTCAATCCCAAACCTTTCCTCA ATGGACTAACAGGAAAGCCAGTGATGGTGAAACTTAAGTGGGGAATGGAGTACAAGGGCTATCTGGTATCTGTAGATGGCTACATGAACA TGCAGAGCTCTCATGGAAACACGATGAAGCAGTTCATGGACATCTTCTCCCTGCCCGAGATGACCCTCCTGTCCTGCGTGAATGAATACT TCCTCAAGAACAACATCGACTATGAGCCTGTGCATCTGTACAAAGATGTCAAGGATTCAATTCGAGACGTCCACATCAAAGGAATAATGT ACAGAGCAATTGAAGCAGACATTGAAAAGTACATCTGCTATGCTGAGCAGACCCGCGCAGTGTTGGCCAAACTGGCTGATCATGGCAAGA AGATGTTTCTCATCACCAATAGCCCCAGTAGCTTTGTGGACAAAGGGATGAGTTATATCGTTGGGAAAGACTGGAGGGACCTGTTCGATG TGGTCATTGTTCAGGCTGAGAAGCCAAACTTCTTTAATGATAAGCGGAGGCCTTTCCGAAAGATGAATGAGAAAGGTGTCTTACTCTGGG ATAAAATCCATAAGTTGCAGAAAGGCCAGATATACAAGCAGGGTAATTTATATGAATTTTTGAAGCTTACTGGATGGAGAGGATCCAGAG TGTTGTATTTTGGTGACCATATATACAGTGACCTGGCGGATTTGACCCTAAAGCATGGCTGGAGGACTGGTGCAATCATCCCAGAGTTGA GATCTGAGCTCAAAATCATGAACACGGAGCAATACATTCAAACCATGACCTGGCTGCAGACCTTGACTGGCTTATTGGAACAGATGCAGG TTCACAGAGATGCTGAGTCACAGCTGGTTTTGCAGGAGTGGAAAAAGGAAAGGAAGGAGATGCGAGAAATGACCAAGAGTTTCTTCAATG CCCAGTTTGGAAGCCTGTTCCGCACAGACCAGAACCCAACCTACTTCCTAAGGCGCCTGTCGCGCTTCGCTGACATCTACATGGCGTCTC TGAGCTGCCTCCTGAACTATGACGTCAGCCACACTTTCTACCCCCGGAGGACTCCACTGCAGCACGAACTGCCCGCCTGGTCAGAAAGGC CCCCCACCTTCGGAACCCCTCTCCTGCAGGAGGCCCAGGCCAAGTAGCCAAGGGCAAAAACTAGAAACTGTAACTGCCCCTGATTGGGCA GGCATGATGGGGTTGACTTCATGTGGGTCTGAGTGTTGCTTTTGGAAAAGATACAGATAAGCCTTTTGATATTTATTTTGTACCTTACGG AGAATAATTCTCCCAATGGTTAAGACAGGAGCTAGCAGCCCACCCCTCCAGCCTTTCCCCCCATGCAGGGCTGAAAGGCAAGCTTCACAT TGGAACTCTGATTTTGCCTTTTTGTTTACTGAGGTCCTGGAACATCAGGTTTCCTGGGATAGGTGAGACCACTTGATGCCATGTCTGTAT TCTAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTCCATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGAACTGCAGGGGCA CAGTGATGGGCAAAGATTAGCTGCTTCCAGAAGGCTGATTTCGTGGGCTCCACAATGGTAAAACGCTGCTGTGAGTGGCAGAGAGGTTCC CCAGGTGATGGCCAGTTCCCAAATCATTTGGTACTAAGGCTTTGACATTCTGGCACATCACATCAAATAGAACACAGCCTCCCTGGAAGG ACTTAAGTGAGAAAGAACAAGAGAAGCTGCAACTCCTGGACCCTTTTGTCCTCAGTGTGTGGTTCCTGCGTCCTTCCCCAGCATGGAGGA GGGCAGGAGAGAGGAGATGAGAGCTCTGGTCAAAACCTGCCAGCTAGTGGAACAGCCTTCTGTAGAGCCTTCTGCAAGAAACGAGTGGGT TTGAAGAACCAAAACATTTGTGGTAGGTCTCCCAGGAGCTTGTTAAACCTGGAAACACCACCTGAGTTGGTTTCATCTGCTCATTGGAAG AAAGAAAATGAACCAGGAAAAAGCATCTTTGTCATGAAATGCTATGCCATGCCACCCACCCAGTTGAATTGGAATCCTGTTAAAACATGA GATTTACCAGAAACAGTCCTTTGTCTAGATGGAAACAAACAAGATCCTGGCTTCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATT GGCCAGGGGAGGAGGAAGATGGCCACCACAACTTAGCCATGTCCAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTG GGAGTTTGTGTAGTTTGTTTTTTTTTTTTTTGTTTTGTTTTGTTTTTTTTTAGATGTCTAAGATGGGAAAGGGCGAAGGACATTGAAGCT AAGGAATAGATATGACCTAGCTAACCAAGCTTTTCTCATTTCCTTCTGTTTTGTTTTGTTGAGATGGAGTTTTGCTCTTATTGCCCAGGC TGGAGTGCAGTGGCACAATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGA TTACAGGCATGCACTACCACACCCAGCTAATTTTGTATTTCTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCC GACCTCAGATAATCTGCCCGCCTTGGCCTCCCAAATTGCTGGGATTACAGGTGTGAGCCACCGCACCTGGCCTGCTTTTTTCATTTCTTT CTAGGGGCAATGCAAGTGGCATGTATTCCTTTTGTTGGAGGGAAGAATCCTTAATTGCACCTGCATTTGTAGTATCCTTCAATGTAAAGT GCATATTTACTGCACTCTCTGAGTGCTATGGGAATGTCTGCTGTTATTAGTTATGGGGCTGCTAATACTGTTTTAATTGCATATGCTATA TCAATACTTCTGTTCAGATTAGCCTAATCTAGTATTGCTAAAACTCATTTTAAGCTTTTGCGGTAACTTGTATATATTCTTAAATCTAAA GGATGGCAGGAACATGAGGGGAGCTTGTGGAGAGTGCTTGCTTATTCAACATTTTTATTGTGATAAATGTATGTAACCATCTATTGATGA AATCCAAGTCTGGCATTCCATGGGCTCCTTGCCAGATGGCAGAAACTTAATGAGTTATATAGCATCCTTTGTAATGCTGCTTGTTATAGT TGGAATGTACTTGTGATATTTGGCTGTATTTAACTATAATGGTGAAGGTGACCCTTTAGATCCAATAAGGCTTCTCCCCATCTTCTACAT TTTGTTATGAACACAGTAAGGCACAGTAGTATGTTCTTTTTTTGGAACAGGGTAGGCATTTTGTTTATTGTTTGCTTGCTTCTAGGTGTT TTCGCCATCAGGGTGTATTGGAGGCTGACACTTAATGGGTGTGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCT GGTGTTCTTGGCTTCAAGTTTCTGCTTTGGAGAAGCAGATTCAGGAAGTAGGTGTTGCTTAAAAATAATTCTTGGTTTTTATCTAATCAG ATATTCATTGATTACCTACCAGGTGCCAGTTATAGGGTGTTTTGTTTACTCAAGAATGAAGTAGAACTATTTTTAAAACCTGTTTCCATG AGTGTTCACGTTAGGTGACCTAAGCTTTGAAGGAGAAAAACATTTTTGGGTATGAATAATGAGTTTTGTAATCAATTCCCAGTTAGAAGA ATTTCAGTCTCTGGGCCATTGAGCTTGGCAGTGTTGAGATCTCCCATGTGACAGAAGCCTGACATCTGGGCCACCAAGGCTCACTGACTG TGTACCTTGCAGACTGTAGACCCATGTCGTGGCGGTAACGGGGCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTT ATTATTAATCCTTGTATATACTCAGTCAGGACAGATTTTAACTTGTCGCTGTCATGACTTTTTTTTTTTTTTTTTGAGGCAAGGTCTCGC TCTGTTGCCCATTCTGGAGTGCAGTGGTGTGATCTCGGCTCACTGCAACCTCTTGCCTCCCAGGTTCAAGCAATTTTCGTGCCTCAGCCT CCCGAGTAGCTGGGACTACTGGTACATGCCACCAGGCCTGGCCAAGTTTTGTAGTTTTAATAGAGATGGGGTTTCACCATGTTGGCCAGG CTGGTCTCAAACTCCTAGCCTCAAGTGTTCTGCCCACCTCAGCCTTCCAAAGTGCTGGGATTCTGGGTGTGAGCCACTGTCATGCCTGGC CTCGTCATGACTCTTTTCTCTTTTTTTTTTTTTTTTTTTTTGAGATTTAGTTTTGCTCTTTTTGCCCAGGCCGGAGTGCAATGGCACGAT CTTGGCTCACTCCAACCTCCGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGTGCCCACCACCA CATCCAGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTTGGGTAATCCA CCTGCCTTGGCCTCCCAAGGTGCTGGGATTACAGGCATGAGCCACCGTGCCCAGCCTATCATGACTCAACTGGGATCTGGCACACTGCAC TGGGTGTTTTGTTCTCTGATGTGCACATTGATGAATGCATATTGGTACAAGGGAAATGAATCTGTTTTCAGCCATTTAAAAAATTGTGTT GTAAAGCAAACAAAAATAGCTTGAACATTTAAAAATTACTGTTTAATATTGTTTGACTGATTTTCTAAGAATTATGTGAACAATGATGAG TCCAGGGCAGCAGCCATCACAAATATGACAGTCCAGCAAGGCCCATGGAGGTCCCTTTGGAAGGGACTTGCACAGCTGATTTTCTTTTTC CAGTGTTGTTTTTACGGGTGAAACGTGGCTTTTGAAATACTTTAGTTGTTTGGCTTAGAGCTCCCACTTTCCCCCTAACATAGTGCCTGT CTGTTTTTTAAAACATTTTACCCTTCGGCACTATTTTCTGCTATTCCCATTAATATTATGTAACATAAACCACTTGCTACTGATTTGGGC ATATTACAGACTACAATTACTAGTTGCTTTGAATGCATTGGCACTCTTAATTATTGCAAAGGAGAATTGAAAAGTAGTCTTGTGGTCCTA GTTAATTTAGCTTTGGGCAAACTAAGTGGCTTTTCTTCTGTCCTCTTCTCAAAAGGCCTTTTAAGCAGCAGAGACTGGGCTAAATACTGG AACTGAATTCCACTTTTCTGCCTGCTCATTTGCTGCCAAAGACCACTTGGGGCTCCTTGTCTAGAATGCTCTAAGACGAAATTTGGCCAG ACACAGGGTTCCTTGATTGTTCTGTTCAACTAATAGAGAACCTACATTTTGCCTTCTTAATATCGACTTTCTTTTGTACCAGGTTTTTCT TTCTTTCTTTTTTGCCTTAGGAGCTTAGCTCAAAGTTCAGCTAACCTTTGACACTACTAGTGTCATTTAGTAACAGTAATCTTTGACACT ACTAGTGTCATTTAGGAGCTTAGCTCAAAGTTCAGCTAACCTTTGACACTGCTAGTGCGTTCAAGAAAGGGTAGGGAATGAAGTACCCTT AATGCAGGGTCAGCAAACTTTTCCTGTAAAAGGCCAGATAGGAAGTATTTTTGGCTTTTTGGGCTGTTTGCTTTTGCTACTACTACTGTG GGAATGACCATGGTCATGGCTGTGTTCCAGCACAACTTGATTTACCAAGACAAGCTGTGGGCTGTATTTGGTCCTCAGGCTGTGGCTTGC TAGCCCCTGCTCTAATGGATTGTGTTGGCGGCAATGGCAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATAGCTGGGATGCA GAGAGGAGAAAGTTCTGTAGGTAATAAGTGCACTGTATTCCCTCTGAGCTACTTCCTGGGCATAGTTACATGTATGGCCAGTGTGTGTAC TTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCTCATTGCATTAGTTTGTAATTGTGCTAGTGCTGGGTGCTGAGCTCAGCTGCC CGGATGACCTTTCCAGACTGAAGGACATACTCCCCTAACAGCTGGGAGTGCTGCTGGCTGGCCATTTACTTCCAGCCCTTATGAGGAGTT TCCCCTGCTGAAGAGCCCTGCCTGCCCCAGATCATACCCCCTTCCTGCCTGTAACCCTTACCGGCTCCATATGGGGTACAAAGGGCTGGC CTCCTCACCCCAACTTGGGAAACCCTCTGGGGCCATCCCAGCTCCAGAGCCCCTTGTGGGGTCAGTGAGACCTCATTGTGGCCACATTAC AGCCCAGTGCCTCTCCCTGACAAGCCTGTACCCAGCCGGCTCAGCCCACAGCACTGTCCTATGAACCTTCCTGCACGCCATTCTCCACCT CAGTATCTGCTTTCGGGGAACCCAACCTGCGACAGTGCTTCTGTGTGTTTTCAGTCCTGCAGGTTTGAACTCTGACTTTGGAGACTTTTC CAGTTATCTCGTGGAATGACAGATTGTGCCTGTATGATATCAGGCACAATTAATGCAAATTAGGCAGACCTATTTATTCTAGATGTGAAT >84800_84800_1_SNRPF-NT5DC3_SNRPF_chr12_96255071_ENST00000266735_NT5DC3_chr12_104190809_ENST00000392876_length(amino acids)=420AA_BP=76 MKLRLGTCGTCCSHEGRAAAWSAESSLQHSAVVTMSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQSSHGNTMKQFMDI FSLPEMTLLSCVNEYFLKNNIDYEPVHLYKDVKDSIRDVHIKGIMYRAIEADIEKYICYAEQTRAVLAKLADHGKKMFLITNSPSSFVDK GMSYIVGKDWRDLFDVVIVQAEKPNFFNDKRRPFRKMNEKGVLLWDKIHKLQKGQIYKQGNLYEFLKLTGWRGSRVLYFGDHIYSDLADL TLKHGWRTGAIIPELRSELKIMNTEQYIQTMTWLQTLTGLLEQMQVHRDAESQLVLQEWKKERKEMREMTKSFFNAQFGSLFRTDQNPTY -------------------------------------------------------------- >84800_84800_2_SNRPF-NT5DC3_SNRPF_chr12_96255071_ENST00000552085_NT5DC3_chr12_104190809_ENST00000392876_length(transcript)=6785nt_BP=234nt CTCTTGAAACTGCGGCTCGGGACCTGCGGTACCTGCTGTAGTCACGAGGGACGGGCGGCGGCCTGGTCGGCAGAGAGTAGCCTGCAACAT TCGGCCGTGGTTACGATGAGTTTACCCCTCAATCCCAAACCTTTCCTCAATGGACTAACAGGAAAGCCAGTGATGGTGAAACTTAAGTGG GGAATGGAGTACAAGGGCTATCTGGTATCTGTAGATGGCTACATGAACATGCAGAGCTCTCATGGAAACACGATGAAGCAGTTCATGGAC ATCTTCTCCCTGCCCGAGATGACCCTCCTGTCCTGCGTGAATGAATACTTCCTCAAGAACAACATCGACTATGAGCCTGTGCATCTGTAC AAAGATGTCAAGGATTCAATTCGAGACGTCCACATCAAAGGAATAATGTACAGAGCAATTGAAGCAGACATTGAAAAGTACATCTGCTAT GCTGAGCAGACCCGCGCAGTGTTGGCCAAACTGGCTGATCATGGCAAGAAGATGTTTCTCATCACCAATAGCCCCAGTAGCTTTGTGGAC AAAGGGATGAGTTATATCGTTGGGAAAGACTGGAGGGACCTGTTCGATGTGGTCATTGTTCAGGCTGAGAAGCCAAACTTCTTTAATGAT AAGCGGAGGCCTTTCCGAAAGATGAATGAGAAAGGTGTCTTACTCTGGGATAAAATCCATAAGTTGCAGAAAGGCCAGATATACAAGCAG GGTAATTTATATGAATTTTTGAAGCTTACTGGATGGAGAGGATCCAGAGTGTTGTATTTTGGTGACCATATATACAGTGACCTGGCGGAT TTGACCCTAAAGCATGGCTGGAGGACTGGTGCAATCATCCCAGAGTTGAGATCTGAGCTCAAAATCATGAACACGGAGCAATACATTCAA ACCATGACCTGGCTGCAGACCTTGACTGGCTTATTGGAACAGATGCAGGTTCACAGAGATGCTGAGTCACAGCTGGTTTTGCAGGAGTGG AAAAAGGAAAGGAAGGAGATGCGAGAAATGACCAAGAGTTTCTTCAATGCCCAGTTTGGAAGCCTGTTCCGCACAGACCAGAACCCAACC TACTTCCTAAGGCGCCTGTCGCGCTTCGCTGACATCTACATGGCGTCTCTGAGCTGCCTCCTGAACTATGACGTCAGCCACACTTTCTAC CCCCGGAGGACTCCACTGCAGCACGAACTGCCCGCCTGGTCAGAAAGGCCCCCCACCTTCGGAACCCCTCTCCTGCAGGAGGCCCAGGCC AAGTAGCCAAGGGCAAAAACTAGAAACTGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTGAGTGTTGCTT TTGGAAAAGATACAGATAAGCCTTTTGATATTTATTTTGTACCTTACGGAGAATAATTCTCCCAATGGTTAAGACAGGAGCTAGCAGCCC ACCCCTCCAGCCTTTCCCCCCATGCAGGGCTGAAAGGCAAGCTTCACATTGGAACTCTGATTTTGCCTTTTTGTTTACTGAGGTCCTGGA ACATCAGGTTTCCTGGGATAGGTGAGACCACTTGATGCCATGTCTGTATTCTAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTCCATG GAACATTTCCTGAACATTTACGGGCTATGCATTGGGAACTGCAGGGGCACAGTGATGGGCAAAGATTAGCTGCTTCCAGAAGGCTGATTT CGTGGGCTCCACAATGGTAAAACGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCATTTGGTACTAAGGCT TTGACATTCTGGCACATCACATCAAATAGAACACAGCCTCCCTGGAAGGACTTAAGTGAGAAAGAACAAGAGAAGCTGCAACTCCTGGAC CCTTTTGTCCTCAGTGTGTGGTTCCTGCGTCCTTCCCCAGCATGGAGGAGGGCAGGAGAGAGGAGATGAGAGCTCTGGTCAAAACCTGCC AGCTAGTGGAACAGCCTTCTGTAGAGCCTTCTGCAAGAAACGAGTGGGTTTGAAGAACCAAAACATTTGTGGTAGGTCTCCCAGGAGCTT GTTAAACCTGGAAACACCACCTGAGTTGGTTTCATCTGCTCATTGGAAGAAAGAAAATGAACCAGGAAAAAGCATCTTTGTCATGAAATG CTATGCCATGCCACCCACCCAGTTGAATTGGAATCCTGTTAAAACATGAGATTTACCAGAAACAGTCCTTTGTCTAGATGGAAACAAACA AGATCCTGGCTTCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGAAGATGGCCACCACAACTTAGCCATG TCCAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAGTTTGTTTTTTTTTTTTTTGTTTTGTTTT GTTTTTTTTTAGATGTCTAAGATGGGAAAGGGCGAAGGACATTGAAGCTAAGGAATAGATATGACCTAGCTAACCAAGCTTTTCTCATTT CCTTCTGTTTTGTTTTGTTGAGATGGAGTTTTGCTCTTATTGCCCAGGCTGGAGTGCAGTGGCACAATCTCAGCTCACTGCAACCTCTGC CTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACTACCACACCCAGCTAATTTTGTATTTC TAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCCGACCTCAGATAATCTGCCCGCCTTGGCCTCCCAAATTGCTG GGATTACAGGTGTGAGCCACCGCACCTGGCCTGCTTTTTTCATTTCTTTCTAGGGGCAATGCAAGTGGCATGTATTCCTTTTGTTGGAGG GAAGAATCCTTAATTGCACCTGCATTTGTAGTATCCTTCAATGTAAAGTGCATATTTACTGCACTCTCTGAGTGCTATGGGAATGTCTGC TGTTATTAGTTATGGGGCTGCTAATACTGTTTTAATTGCATATGCTATATCAATACTTCTGTTCAGATTAGCCTAATCTAGTATTGCTAA AACTCATTTTAAGCTTTTGCGGTAACTTGTATATATTCTTAAATCTAAAGGATGGCAGGAACATGAGGGGAGCTTGTGGAGAGTGCTTGC TTATTCAACATTTTTATTGTGATAAATGTATGTAACCATCTATTGATGAAATCCAAGTCTGGCATTCCATGGGCTCCTTGCCAGATGGCA GAAACTTAATGAGTTATATAGCATCCTTTGTAATGCTGCTTGTTATAGTTGGAATGTACTTGTGATATTTGGCTGTATTTAACTATAATG GTGAAGGTGACCCTTTAGATCCAATAAGGCTTCTCCCCATCTTCTACATTTTGTTATGAACACAGTAAGGCACAGTAGTATGTTCTTTTT TTGGAACAGGGTAGGCATTTTGTTTATTGTTTGCTTGCTTCTAGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTTAATGGGTG TGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGTTCTTGGCTTCAAGTTTCTGCTTTGGAGAAGCAGATT CAGGAAGTAGGTGTTGCTTAAAAATAATTCTTGGTTTTTATCTAATCAGATATTCATTGATTACCTACCAGGTGCCAGTTATAGGGTGTT TTGTTTACTCAAGAATGAAGTAGAACTATTTTTAAAACCTGTTTCCATGAGTGTTCACGTTAGGTGACCTAAGCTTTGAAGGAGAAAAAC ATTTTTGGGTATGAATAATGAGTTTTGTAATCAATTCCCAGTTAGAAGAATTTCAGTCTCTGGGCCATTGAGCTTGGCAGTGTTGAGATC TCCCATGTGACAGAAGCCTGACATCTGGGCCACCAAGGCTCACTGACTGTGTACCTTGCAGACTGTAGACCCATGTCGTGGCGGTAACGG GGCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATTAATCCTTGTATATACTCAGTCAGGACAGATTTTAA CTTGTCGCTGTCATGACTTTTTTTTTTTTTTTTTGAGGCAAGGTCTCGCTCTGTTGCCCATTCTGGAGTGCAGTGGTGTGATCTCGGCTC ACTGCAACCTCTTGCCTCCCAGGTTCAAGCAATTTTCGTGCCTCAGCCTCCCGAGTAGCTGGGACTACTGGTACATGCCACCAGGCCTGG CCAAGTTTTGTAGTTTTAATAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTAGCCTCAAGTGTTCTGCCCACCTCA GCCTTCCAAAGTGCTGGGATTCTGGGTGTGAGCCACTGTCATGCCTGGCCTCGTCATGACTCTTTTCTCTTTTTTTTTTTTTTTTTTTTT GAGATTTAGTTTTGCTCTTTTTGCCCAGGCCGGAGTGCAATGGCACGATCTTGGCTCACTCCAACCTCCGCCTCCTGGGTTCAAGTGATT CTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGTGCCCACCACCACATCCAGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTT TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTTGGGTAATCCACCTGCCTTGGCCTCCCAAGGTGCTGGGATTACAGGCATGAG CCACCGTGCCCAGCCTATCATGACTCAACTGGGATCTGGCACACTGCACTGGGTGTTTTGTTCTCTGATGTGCACATTGATGAATGCATA TTGGTACAAGGGAAATGAATCTGTTTTCAGCCATTTAAAAAATTGTGTTGTAAAGCAAACAAAAATAGCTTGAACATTTAAAAATTACTG TTTAATATTGTTTGACTGATTTTCTAAGAATTATGTGAACAATGATGAGTCCAGGGCAGCAGCCATCACAAATATGACAGTCCAGCAAGG CCCATGGAGGTCCCTTTGGAAGGGACTTGCACAGCTGATTTTCTTTTTCCAGTGTTGTTTTTACGGGTGAAACGTGGCTTTTGAAATACT TTAGTTGTTTGGCTTAGAGCTCCCACTTTCCCCCTAACATAGTGCCTGTCTGTTTTTTAAAACATTTTACCCTTCGGCACTATTTTCTGC TATTCCCATTAATATTATGTAACATAAACCACTTGCTACTGATTTGGGCATATTACAGACTACAATTACTAGTTGCTTTGAATGCATTGG CACTCTTAATTATTGCAAAGGAGAATTGAAAAGTAGTCTTGTGGTCCTAGTTAATTTAGCTTTGGGCAAACTAAGTGGCTTTTCTTCTGT CCTCTTCTCAAAAGGCCTTTTAAGCAGCAGAGACTGGGCTAAATACTGGAACTGAATTCCACTTTTCTGCCTGCTCATTTGCTGCCAAAG ACCACTTGGGGCTCCTTGTCTAGAATGCTCTAAGACGAAATTTGGCCAGACACAGGGTTCCTTGATTGTTCTGTTCAACTAATAGAGAAC CTACATTTTGCCTTCTTAATATCGACTTTCTTTTGTACCAGGTTTTTCTTTCTTTCTTTTTTGCCTTAGGAGCTTAGCTCAAAGTTCAGC TAACCTTTGACACTACTAGTGTCATTTAGTAACAGTAATCTTTGACACTACTAGTGTCATTTAGGAGCTTAGCTCAAAGTTCAGCTAACC TTTGACACTGCTAGTGCGTTCAAGAAAGGGTAGGGAATGAAGTACCCTTAATGCAGGGTCAGCAAACTTTTCCTGTAAAAGGCCAGATAG GAAGTATTTTTGGCTTTTTGGGCTGTTTGCTTTTGCTACTACTACTGTGGGAATGACCATGGTCATGGCTGTGTTCCAGCACAACTTGAT TTACCAAGACAAGCTGTGGGCTGTATTTGGTCCTCAGGCTGTGGCTTGCTAGCCCCTGCTCTAATGGATTGTGTTGGCGGCAATGGCAAG ATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATAGCTGGGATGCAGAGAGGAGAAAGTTCTGTAGGTAATAAGTGCACTGTATTCC CTCTGAGCTACTTCCTGGGCATAGTTACATGTATGGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCTCTCA TTGCATTAGTTTGTAATTGTGCTAGTGCTGGGTGCTGAGCTCAGCTGCCCGGATGACCTTTCCAGACTGAAGGACATACTCCCCTAACAG CTGGGAGTGCTGCTGGCTGGCCATTTACTTCCAGCCCTTATGAGGAGTTTCCCCTGCTGAAGAGCCCTGCCTGCCCCAGATCATACCCCC TTCCTGCCTGTAACCCTTACCGGCTCCATATGGGGTACAAAGGGCTGGCCTCCTCACCCCAACTTGGGAAACCCTCTGGGGCCATCCCAG CTCCAGAGCCCCTTGTGGGGTCAGTGAGACCTCATTGTGGCCACATTACAGCCCAGTGCCTCTCCCTGACAAGCCTGTACCCAGCCGGCT CAGCCCACAGCACTGTCCTATGAACCTTCCTGCACGCCATTCTCCACCTCAGTATCTGCTTTCGGGGAACCCAACCTGCGACAGTGCTTC TGTGTGTTTTCAGTCCTGCAGGTTTGAACTCTGACTTTGGAGACTTTTCCAGTTATCTCGTGGAATGACAGATTGTGCCTGTATGATATC AGGCACAATTAATGCAAATTAGGCAGACCTATTTATTCTAGATGTGAATTTGCTATTTATTTTAAATGTTGATTTTATGTGTTATGTGAC >84800_84800_2_SNRPF-NT5DC3_SNRPF_chr12_96255071_ENST00000552085_NT5DC3_chr12_104190809_ENST00000392876_length(amino acids)=420AA_BP=76 MKLRLGTCGTCCSHEGRAAAWSAESSLQHSAVVTMSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQSSHGNTMKQFMDI FSLPEMTLLSCVNEYFLKNNIDYEPVHLYKDVKDSIRDVHIKGIMYRAIEADIEKYICYAEQTRAVLAKLADHGKKMFLITNSPSSFVDK GMSYIVGKDWRDLFDVVIVQAEKPNFFNDKRRPFRKMNEKGVLLWDKIHKLQKGQIYKQGNLYEFLKLTGWRGSRVLYFGDHIYSDLADL TLKHGWRTGAIIPELRSELKIMNTEQYIQTMTWLQTLTGLLEQMQVHRDAESQLVLQEWKKERKEMREMTKSFFNAQFGSLFRTDQNPTY -------------------------------------------------------------- >84800_84800_3_SNRPF-NT5DC3_SNRPF_chr12_96255071_ENST00000553192_NT5DC3_chr12_104190809_ENST00000392876_length(transcript)=6789nt_BP=238nt ATTTCTCTTGAAACTGCGGCTCGGGACCTGCGGTACCTGCTGTAGTCACGAGGGACGGGCGGCGGCCTGGTCGGCAGAGAGTAGCCTGCA ACATTCGGCCGTGGTTACGATGAGTTTACCCCTCAATCCCAAACCTTTCCTCAATGGACTAACAGGAAAGCCAGTGATGGTGAAACTTAA GTGGGGAATGGAGTACAAGGGCTATCTGGTATCTGTAGATGGCTACATGAACATGCAGAGCTCTCATGGAAACACGATGAAGCAGTTCAT GGACATCTTCTCCCTGCCCGAGATGACCCTCCTGTCCTGCGTGAATGAATACTTCCTCAAGAACAACATCGACTATGAGCCTGTGCATCT GTACAAAGATGTCAAGGATTCAATTCGAGACGTCCACATCAAAGGAATAATGTACAGAGCAATTGAAGCAGACATTGAAAAGTACATCTG CTATGCTGAGCAGACCCGCGCAGTGTTGGCCAAACTGGCTGATCATGGCAAGAAGATGTTTCTCATCACCAATAGCCCCAGTAGCTTTGT GGACAAAGGGATGAGTTATATCGTTGGGAAAGACTGGAGGGACCTGTTCGATGTGGTCATTGTTCAGGCTGAGAAGCCAAACTTCTTTAA TGATAAGCGGAGGCCTTTCCGAAAGATGAATGAGAAAGGTGTCTTACTCTGGGATAAAATCCATAAGTTGCAGAAAGGCCAGATATACAA GCAGGGTAATTTATATGAATTTTTGAAGCTTACTGGATGGAGAGGATCCAGAGTGTTGTATTTTGGTGACCATATATACAGTGACCTGGC GGATTTGACCCTAAAGCATGGCTGGAGGACTGGTGCAATCATCCCAGAGTTGAGATCTGAGCTCAAAATCATGAACACGGAGCAATACAT TCAAACCATGACCTGGCTGCAGACCTTGACTGGCTTATTGGAACAGATGCAGGTTCACAGAGATGCTGAGTCACAGCTGGTTTTGCAGGA GTGGAAAAAGGAAAGGAAGGAGATGCGAGAAATGACCAAGAGTTTCTTCAATGCCCAGTTTGGAAGCCTGTTCCGCACAGACCAGAACCC AACCTACTTCCTAAGGCGCCTGTCGCGCTTCGCTGACATCTACATGGCGTCTCTGAGCTGCCTCCTGAACTATGACGTCAGCCACACTTT CTACCCCCGGAGGACTCCACTGCAGCACGAACTGCCCGCCTGGTCAGAAAGGCCCCCCACCTTCGGAACCCCTCTCCTGCAGGAGGCCCA GGCCAAGTAGCCAAGGGCAAAAACTAGAAACTGTAACTGCCCCTGATTGGGCAGGCATGATGGGGTTGACTTCATGTGGGTCTGAGTGTT GCTTTTGGAAAAGATACAGATAAGCCTTTTGATATTTATTTTGTACCTTACGGAGAATAATTCTCCCAATGGTTAAGACAGGAGCTAGCA GCCCACCCCTCCAGCCTTTCCCCCCATGCAGGGCTGAAAGGCAAGCTTCACATTGGAACTCTGATTTTGCCTTTTTGTTTACTGAGGTCC TGGAACATCAGGTTTCCTGGGATAGGTGAGACCACTTGATGCCATGTCTGTATTCTAGCAGGTCAAGCTTGAAACGGTTCTTGACTCCTC CATGGAACATTTCCTGAACATTTACGGGCTATGCATTGGGAACTGCAGGGGCACAGTGATGGGCAAAGATTAGCTGCTTCCAGAAGGCTG ATTTCGTGGGCTCCACAATGGTAAAACGCTGCTGTGAGTGGCAGAGAGGTTCCCCAGGTGATGGCCAGTTCCCAAATCATTTGGTACTAA GGCTTTGACATTCTGGCACATCACATCAAATAGAACACAGCCTCCCTGGAAGGACTTAAGTGAGAAAGAACAAGAGAAGCTGCAACTCCT GGACCCTTTTGTCCTCAGTGTGTGGTTCCTGCGTCCTTCCCCAGCATGGAGGAGGGCAGGAGAGAGGAGATGAGAGCTCTGGTCAAAACC TGCCAGCTAGTGGAACAGCCTTCTGTAGAGCCTTCTGCAAGAAACGAGTGGGTTTGAAGAACCAAAACATTTGTGGTAGGTCTCCCAGGA GCTTGTTAAACCTGGAAACACCACCTGAGTTGGTTTCATCTGCTCATTGGAAGAAAGAAAATGAACCAGGAAAAAGCATCTTTGTCATGA AATGCTATGCCATGCCACCCACCCAGTTGAATTGGAATCCTGTTAAAACATGAGATTTACCAGAAACAGTCCTTTGTCTAGATGGAAACA AACAAGATCCTGGCTTCTCTCTAATGAGTTACCAACTGAGAGGTGCTTGGATTGGCCAGGGGAGGAGGAAGATGGCCACCACAACTTAGC CATGTCCAGCCTTCTCTTAGATTTCACTCCTGTGATGTTTGTGCGACTATTTGGGAGTTTGTGTAGTTTGTTTTTTTTTTTTTTGTTTTG TTTTGTTTTTTTTTAGATGTCTAAGATGGGAAAGGGCGAAGGACATTGAAGCTAAGGAATAGATATGACCTAGCTAACCAAGCTTTTCTC ATTTCCTTCTGTTTTGTTTTGTTGAGATGGAGTTTTGCTCTTATTGCCCAGGCTGGAGTGCAGTGGCACAATCTCAGCTCACTGCAACCT CTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACTACCACACCCAGCTAATTTTGTA TTTCTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCCGACCTCAGATAATCTGCCCGCCTTGGCCTCCCAAATT GCTGGGATTACAGGTGTGAGCCACCGCACCTGGCCTGCTTTTTTCATTTCTTTCTAGGGGCAATGCAAGTGGCATGTATTCCTTTTGTTG GAGGGAAGAATCCTTAATTGCACCTGCATTTGTAGTATCCTTCAATGTAAAGTGCATATTTACTGCACTCTCTGAGTGCTATGGGAATGT CTGCTGTTATTAGTTATGGGGCTGCTAATACTGTTTTAATTGCATATGCTATATCAATACTTCTGTTCAGATTAGCCTAATCTAGTATTG CTAAAACTCATTTTAAGCTTTTGCGGTAACTTGTATATATTCTTAAATCTAAAGGATGGCAGGAACATGAGGGGAGCTTGTGGAGAGTGC TTGCTTATTCAACATTTTTATTGTGATAAATGTATGTAACCATCTATTGATGAAATCCAAGTCTGGCATTCCATGGGCTCCTTGCCAGAT GGCAGAAACTTAATGAGTTATATAGCATCCTTTGTAATGCTGCTTGTTATAGTTGGAATGTACTTGTGATATTTGGCTGTATTTAACTAT AATGGTGAAGGTGACCCTTTAGATCCAATAAGGCTTCTCCCCATCTTCTACATTTTGTTATGAACACAGTAAGGCACAGTAGTATGTTCT TTTTTTGGAACAGGGTAGGCATTTTGTTTATTGTTTGCTTGCTTCTAGGTGTTTTCGCCATCAGGGTGTATTGGAGGCTGACACTTAATG GGTGTGTGTTGCGCCCAGAACTGCTCGGTGTCGGGGTTCTAAAAGAATGCGCTGGTGTTCTTGGCTTCAAGTTTCTGCTTTGGAGAAGCA GATTCAGGAAGTAGGTGTTGCTTAAAAATAATTCTTGGTTTTTATCTAATCAGATATTCATTGATTACCTACCAGGTGCCAGTTATAGGG TGTTTTGTTTACTCAAGAATGAAGTAGAACTATTTTTAAAACCTGTTTCCATGAGTGTTCACGTTAGGTGACCTAAGCTTTGAAGGAGAA AAACATTTTTGGGTATGAATAATGAGTTTTGTAATCAATTCCCAGTTAGAAGAATTTCAGTCTCTGGGCCATTGAGCTTGGCAGTGTTGA GATCTCCCATGTGACAGAAGCCTGACATCTGGGCCACCAAGGCTCACTGACTGTGTACCTTGCAGACTGTAGACCCATGTCGTGGCGGTA ACGGGGCCGAACACAGTCATTCCCATGTGAACGATGGAGGCACATCCCACTTTATTATTAATCCTTGTATATACTCAGTCAGGACAGATT TTAACTTGTCGCTGTCATGACTTTTTTTTTTTTTTTTTGAGGCAAGGTCTCGCTCTGTTGCCCATTCTGGAGTGCAGTGGTGTGATCTCG GCTCACTGCAACCTCTTGCCTCCCAGGTTCAAGCAATTTTCGTGCCTCAGCCTCCCGAGTAGCTGGGACTACTGGTACATGCCACCAGGC CTGGCCAAGTTTTGTAGTTTTAATAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTAGCCTCAAGTGTTCTGCCCAC CTCAGCCTTCCAAAGTGCTGGGATTCTGGGTGTGAGCCACTGTCATGCCTGGCCTCGTCATGACTCTTTTCTCTTTTTTTTTTTTTTTTT TTTTGAGATTTAGTTTTGCTCTTTTTGCCCAGGCCGGAGTGCAATGGCACGATCTTGGCTCACTCCAACCTCCGCCTCCTGGGTTCAAGT GATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGTGCCCACCACCACATCCAGCTAATTTTTTTGTATTTTTAGTAGAGACGG GGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTTGGGTAATCCACCTGCCTTGGCCTCCCAAGGTGCTGGGATTACAGGCA TGAGCCACCGTGCCCAGCCTATCATGACTCAACTGGGATCTGGCACACTGCACTGGGTGTTTTGTTCTCTGATGTGCACATTGATGAATG CATATTGGTACAAGGGAAATGAATCTGTTTTCAGCCATTTAAAAAATTGTGTTGTAAAGCAAACAAAAATAGCTTGAACATTTAAAAATT ACTGTTTAATATTGTTTGACTGATTTTCTAAGAATTATGTGAACAATGATGAGTCCAGGGCAGCAGCCATCACAAATATGACAGTCCAGC AAGGCCCATGGAGGTCCCTTTGGAAGGGACTTGCACAGCTGATTTTCTTTTTCCAGTGTTGTTTTTACGGGTGAAACGTGGCTTTTGAAA TACTTTAGTTGTTTGGCTTAGAGCTCCCACTTTCCCCCTAACATAGTGCCTGTCTGTTTTTTAAAACATTTTACCCTTCGGCACTATTTT CTGCTATTCCCATTAATATTATGTAACATAAACCACTTGCTACTGATTTGGGCATATTACAGACTACAATTACTAGTTGCTTTGAATGCA TTGGCACTCTTAATTATTGCAAAGGAGAATTGAAAAGTAGTCTTGTGGTCCTAGTTAATTTAGCTTTGGGCAAACTAAGTGGCTTTTCTT CTGTCCTCTTCTCAAAAGGCCTTTTAAGCAGCAGAGACTGGGCTAAATACTGGAACTGAATTCCACTTTTCTGCCTGCTCATTTGCTGCC AAAGACCACTTGGGGCTCCTTGTCTAGAATGCTCTAAGACGAAATTTGGCCAGACACAGGGTTCCTTGATTGTTCTGTTCAACTAATAGA GAACCTACATTTTGCCTTCTTAATATCGACTTTCTTTTGTACCAGGTTTTTCTTTCTTTCTTTTTTGCCTTAGGAGCTTAGCTCAAAGTT CAGCTAACCTTTGACACTACTAGTGTCATTTAGTAACAGTAATCTTTGACACTACTAGTGTCATTTAGGAGCTTAGCTCAAAGTTCAGCT AACCTTTGACACTGCTAGTGCGTTCAAGAAAGGGTAGGGAATGAAGTACCCTTAATGCAGGGTCAGCAAACTTTTCCTGTAAAAGGCCAG ATAGGAAGTATTTTTGGCTTTTTGGGCTGTTTGCTTTTGCTACTACTACTGTGGGAATGACCATGGTCATGGCTGTGTTCCAGCACAACT TGATTTACCAAGACAAGCTGTGGGCTGTATTTGGTCCTCAGGCTGTGGCTTGCTAGCCCCTGCTCTAATGGATTGTGTTGGCGGCAATGG CAAGATTCCCTTGCTGAGAACATGCAGATGAATAACCTTATAGCTGGGATGCAGAGAGGAGAAAGTTCTGTAGGTAATAAGTGCACTGTA TTCCCTCTGAGCTACTTCCTGGGCATAGTTACATGTATGGCCAGTGTGTGTACTTGAGCCATCAGGCTCAGACACTTGTTGAATATACCT CTCATTGCATTAGTTTGTAATTGTGCTAGTGCTGGGTGCTGAGCTCAGCTGCCCGGATGACCTTTCCAGACTGAAGGACATACTCCCCTA ACAGCTGGGAGTGCTGCTGGCTGGCCATTTACTTCCAGCCCTTATGAGGAGTTTCCCCTGCTGAAGAGCCCTGCCTGCCCCAGATCATAC CCCCTTCCTGCCTGTAACCCTTACCGGCTCCATATGGGGTACAAAGGGCTGGCCTCCTCACCCCAACTTGGGAAACCCTCTGGGGCCATC CCAGCTCCAGAGCCCCTTGTGGGGTCAGTGAGACCTCATTGTGGCCACATTACAGCCCAGTGCCTCTCCCTGACAAGCCTGTACCCAGCC GGCTCAGCCCACAGCACTGTCCTATGAACCTTCCTGCACGCCATTCTCCACCTCAGTATCTGCTTTCGGGGAACCCAACCTGCGACAGTG CTTCTGTGTGTTTTCAGTCCTGCAGGTTTGAACTCTGACTTTGGAGACTTTTCCAGTTATCTCGTGGAATGACAGATTGTGCCTGTATGA TATCAGGCACAATTAATGCAAATTAGGCAGACCTATTTATTCTAGATGTGAATTTGCTATTTATTTTAAATGTTGATTTTATGTGTTATG >84800_84800_3_SNRPF-NT5DC3_SNRPF_chr12_96255071_ENST00000553192_NT5DC3_chr12_104190809_ENST00000392876_length(amino acids)=420AA_BP=76 MKLRLGTCGTCCSHEGRAAAWSAESSLQHSAVVTMSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQSSHGNTMKQFMDI FSLPEMTLLSCVNEYFLKNNIDYEPVHLYKDVKDSIRDVHIKGIMYRAIEADIEKYICYAEQTRAVLAKLADHGKKMFLITNSPSSFVDK GMSYIVGKDWRDLFDVVIVQAEKPNFFNDKRRPFRKMNEKGVLLWDKIHKLQKGQIYKQGNLYEFLKLTGWRGSRVLYFGDHIYSDLADL TLKHGWRTGAIIPELRSELKIMNTEQYIQTMTWLQTLTGLLEQMQVHRDAESQLVLQEWKKERKEMREMTKSFFNAQFGSLFRTDQNPTY -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for SNRPF-NT5DC3 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for SNRPF-NT5DC3 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for SNRPF-NT5DC3 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2021-Present -The University of Texas Health Science Center at Houston (UTHealth)
Web File Viewing | Emergency Information |Campus Carry|Site Policies