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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:STAU1-MAP1LC3A (FusionGDB2 ID:87305)

Fusion Gene Summary for STAU1-MAP1LC3A

check button Fusion gene summary
Fusion gene informationFusion gene name: STAU1-MAP1LC3A
Fusion gene ID: 87305
HgeneTgene
Gene symbol

STAU1

MAP1LC3A

Gene ID

6780

84557

Gene namestaufen double-stranded RNA binding protein 1microtubule associated protein 1 light chain 3 alpha
SynonymsPPP1R150|STAUATG8E|LC3|LC3A|MAP1ALC3|MAP1BLC3
Cytomap

20q13.13

20q11.22

Type of geneprotein-codingprotein-coding
Descriptiondouble-stranded RNA-binding protein Staufen homolog 1protein phosphatase 1, regulatory subunit 150staufen, RNA binding protein, homolog 1microtubule-associated proteins 1A/1B light chain 3AMAP1 light chain 3-like protein 1MAP1A/1B light chain 3 AMAP1A/MAP1B LC3 AMAP1A/MAP1B light chain 3 Aautophagy-related ubiquitin-like modifier LC3 Amicrotubule-associated proteins 1A/1B light chain
Modification date2020032220200329
UniProtAcc.

Q9H492

Ensembl transtripts involved in fusion geneENST00000340954, ENST00000347458, 
ENST00000360426, ENST00000371792, 
ENST00000371802, ENST00000371828, 
ENST00000371856, 		ENST00000476428, 
ENST00000360668, ENST00000374837, 
ENST00000397709, 
Fusion gene scores* DoF score28 X 24 X 9=60486 X 9 X 5=270
# samples 319
** MAII scorelog2(31/6048*10)=-4.28611801894684
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(9/270*10)=-1.58496250072116
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: STAU1 [Title/Abstract] AND MAP1LC3A [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointSTAU1(47768119)-MAP1LC3A(33137709), # samples:3
Anticipated loss of major functional domain due to fusion event.STAU1-MAP1LC3A seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneMAP1LC3A

GO:0009267

cellular response to starvation

28223137

TgeneMAP1LC3A

GO:0016236

macroautophagy

28223137

TgeneMAP1LC3A

GO:0097352

autophagosome maturation

28223137


check buttonFusion gene breakpoints across STAU1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across MAP1LC3A (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4STADTCGA-VQ-A8PH-01ASTAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
ChimerDB4STADTCGA-VQ-A8PH-01ASTAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
ChimerDB4STADTCGA-VQ-A8PH-01ASTAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
ChimerDB4STADTCGA-VQ-A8PH-01ASTAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
ChimerDB4STADTCGA-VQ-A8PHSTAU1chr20

47768118

-MAP1LC3Achr20

33137708

+


Top

Fusion Gene ORF analysis for STAU1-MAP1LC3A

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-3UTRENST00000340954ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
5CDS-3UTRENST00000347458ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
5CDS-3UTRENST00000360426ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
5CDS-3UTRENST00000371792ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
5CDS-3UTRENST00000371802ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
5CDS-3UTRENST00000371828ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
5CDS-3UTRENST00000371856ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
5CDS-5UTRENST00000340954ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-5UTRENST00000340954ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-5UTRENST00000340954ENST00000374837STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-5UTRENST00000340954ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-5UTRENST00000347458ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-5UTRENST00000347458ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-5UTRENST00000347458ENST00000374837STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-5UTRENST00000347458ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-5UTRENST00000360426ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-5UTRENST00000360426ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-5UTRENST00000360426ENST00000374837STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-5UTRENST00000360426ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-5UTRENST00000371792ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-5UTRENST00000371792ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-5UTRENST00000371792ENST00000374837STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-5UTRENST00000371792ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-5UTRENST00000371802ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-5UTRENST00000371802ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-5UTRENST00000371802ENST00000374837STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-5UTRENST00000371802ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-5UTRENST00000371828ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-5UTRENST00000371828ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-5UTRENST00000371828ENST00000374837STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-5UTRENST00000371828ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-5UTRENST00000371856ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-5UTRENST00000371856ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-5UTRENST00000371856ENST00000374837STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-5UTRENST00000371856ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-intronENST00000340954ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000340954ENST00000360668STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000340954ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-intronENST00000340954ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000340954ENST00000397709STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000340954ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000340954ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-intronENST00000340954ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
5CDS-intronENST00000340954ENST00000476428STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000347458ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000347458ENST00000360668STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000347458ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-intronENST00000347458ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000347458ENST00000397709STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000347458ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000347458ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-intronENST00000347458ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
5CDS-intronENST00000347458ENST00000476428STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000360426ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000360426ENST00000360668STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000360426ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-intronENST00000360426ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000360426ENST00000397709STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000360426ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000360426ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-intronENST00000360426ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
5CDS-intronENST00000360426ENST00000476428STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000371792ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000371792ENST00000360668STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000371792ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-intronENST00000371792ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000371792ENST00000397709STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000371792ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000371792ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-intronENST00000371792ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
5CDS-intronENST00000371792ENST00000476428STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000371802ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000371802ENST00000360668STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000371802ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-intronENST00000371802ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000371802ENST00000397709STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000371802ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000371802ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-intronENST00000371802ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
5CDS-intronENST00000371802ENST00000476428STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000371828ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000371828ENST00000360668STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000371828ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-intronENST00000371828ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000371828ENST00000397709STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000371828ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000371828ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-intronENST00000371828ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
5CDS-intronENST00000371828ENST00000476428STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000371856ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000371856ENST00000360668STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000371856ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-intronENST00000371856ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000371856ENST00000397709STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
5CDS-intronENST00000371856ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33137709

+
5CDS-intronENST00000371856ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33146542

+
5CDS-intronENST00000371856ENST00000476428STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
5CDS-intronENST00000371856ENST00000476428STAU1chr20

47768118

-MAP1LC3Achr20

33137708

+
Frame-shiftENST00000340954ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000340954ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000340954ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000347458ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000347458ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000347458ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000360426ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000360426ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000360426ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000371792ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000371792ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000371792ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000371802ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000371802ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000371802ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000371828ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000371828ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000371828ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
Frame-shiftENST00000371856ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
Frame-shiftENST00000371856ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
Frame-shiftENST00000371856ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000340954ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000340954ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000340954ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000347458ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000347458ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000347458ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000360426ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000360426ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000360426ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000371792ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000371792ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000371792ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000371802ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000371802ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000371802ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000371828ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000371828ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000371828ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33147151

+
In-frameENST00000371856ENST00000360668STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
In-frameENST00000371856ENST00000374837STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+
In-frameENST00000371856ENST00000397709STAU1chr20

47768119

-MAP1LC3Achr20

33147012

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000371856STAU1chr2047768119-ENST00000374837MAP1LC3Achr2033147012+1694921372980202
ENST00000371856STAU1chr2047768119-ENST00000360668MAP1LC3Achr2033147012+1694921372980202
ENST00000371856STAU1chr2047768119-ENST00000397709MAP1LC3Achr2033147012+1428921372980202
ENST00000371828STAU1chr2047768119-ENST00000374837MAP1LC3Achr2033147151+14727554191024201
ENST00000371828STAU1chr2047768119-ENST00000360668MAP1LC3Achr2033147151+14727554191024201
ENST00000371828STAU1chr2047768119-ENST00000397709MAP1LC3Achr2033147151+12067554191024201
ENST00000371802STAU1chr2047768119-ENST00000374837MAP1LC3Achr2033147151+12745575826273
ENST00000371802STAU1chr2047768119-ENST00000360668MAP1LC3Achr2033147151+12745575826273
ENST00000371802STAU1chr2047768119-ENST00000397709MAP1LC3Achr2033147151+10085575826273
ENST00000347458STAU1chr2047768119-ENST00000374837MAP1LC3Achr2033147151+12745575826273
ENST00000347458STAU1chr2047768119-ENST00000360668MAP1LC3Achr2033147151+12745575826273
ENST00000347458STAU1chr2047768119-ENST00000397709MAP1LC3Achr2033147151+10085575826273
ENST00000340954STAU1chr2047768119-ENST00000374837MAP1LC3Achr2033147151+14727554191024201
ENST00000340954STAU1chr2047768119-ENST00000360668MAP1LC3Achr2033147151+14727554191024201
ENST00000340954STAU1chr2047768119-ENST00000397709MAP1LC3Achr2033147151+12067554191024201
ENST00000371792STAU1chr2047768119-ENST00000374837MAP1LC3Achr2033147151+12745575826273
ENST00000371792STAU1chr2047768119-ENST00000360668MAP1LC3Achr2033147151+12745575826273
ENST00000371792STAU1chr2047768119-ENST00000397709MAP1LC3Achr2033147151+10085575826273
ENST00000360426STAU1chr2047768119-ENST00000374837MAP1LC3Achr2033147151+1349632296901201
ENST00000360426STAU1chr2047768119-ENST00000360668MAP1LC3Achr2033147151+1349632296901201
ENST00000360426STAU1chr2047768119-ENST00000397709MAP1LC3Achr2033147151+1083632296901201

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000371856ENST00000374837STAU1chr2047768119-MAP1LC3Achr2033147012+0.0117524850.9882476
ENST00000371856ENST00000360668STAU1chr2047768119-MAP1LC3Achr2033147012+0.0117524850.9882476
ENST00000371856ENST00000397709STAU1chr2047768119-MAP1LC3Achr2033147012+0.0089183260.9910816
ENST00000371828ENST00000374837STAU1chr2047768119-MAP1LC3Achr2033147151+0.0058505040.99414957
ENST00000371828ENST00000360668STAU1chr2047768119-MAP1LC3Achr2033147151+0.0058505040.99414957
ENST00000371828ENST00000397709STAU1chr2047768119-MAP1LC3Achr2033147151+0.0048225880.9951774
ENST00000371802ENST00000374837STAU1chr2047768119-MAP1LC3Achr2033147151+0.0064237130.99357635
ENST00000371802ENST00000360668STAU1chr2047768119-MAP1LC3Achr2033147151+0.0064237130.99357635
ENST00000371802ENST00000397709STAU1chr2047768119-MAP1LC3Achr2033147151+0.0057488290.99425113
ENST00000347458ENST00000374837STAU1chr2047768119-MAP1LC3Achr2033147151+0.0064237130.99357635
ENST00000347458ENST00000360668STAU1chr2047768119-MAP1LC3Achr2033147151+0.0064237130.99357635
ENST00000347458ENST00000397709STAU1chr2047768119-MAP1LC3Achr2033147151+0.0057488290.99425113
ENST00000340954ENST00000374837STAU1chr2047768119-MAP1LC3Achr2033147151+0.0058505040.99414957
ENST00000340954ENST00000360668STAU1chr2047768119-MAP1LC3Achr2033147151+0.0058505040.99414957
ENST00000340954ENST00000397709STAU1chr2047768119-MAP1LC3Achr2033147151+0.0048225880.9951774
ENST00000371792ENST00000374837STAU1chr2047768119-MAP1LC3Achr2033147151+0.0064237130.99357635
ENST00000371792ENST00000360668STAU1chr2047768119-MAP1LC3Achr2033147151+0.0064237130.99357635
ENST00000371792ENST00000397709STAU1chr2047768119-MAP1LC3Achr2033147151+0.0057488290.99425113
ENST00000360426ENST00000374837STAU1chr2047768119-MAP1LC3Achr2033147151+0.0056786440.99432135
ENST00000360426ENST00000360668STAU1chr2047768119-MAP1LC3Achr2033147151+0.0056786440.99432135
ENST00000360426ENST00000397709STAU1chr2047768119-MAP1LC3Achr2033147151+0.0047231840.9952768

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Fusion Genomic Features for STAU1-MAP1LC3A


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
STAU1chr2047768118-MAP1LC3Achr2033137708+2.64E-070.99999976
STAU1chr2047768118-MAP1LC3Achr2033137708+2.64E-070.99999976
STAU1chr2047768118-MAP1LC3Achr2033147011+4.17E-091
STAU1chr2047768118-MAP1LC3Achr2033147150+7.35E-121
STAU1chr2047768118-MAP1LC3Achr2033137708+2.64E-070.99999976
STAU1chr2047768118-MAP1LC3Achr2033137708+2.64E-070.99999976
STAU1chr2047768118-MAP1LC3Achr2033147011+4.17E-091
STAU1chr2047768118-MAP1LC3Achr2033147150+7.35E-121

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

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Fusion Protein Features for STAU1-MAP1LC3A


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr20:47768119/chr20:33137709)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.MAP1LC3A

Q9H492

FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Ubiquitin-like modifier involved in formation of autophagosomal vacuoles (autophagosomes) (PubMed:20713600, PubMed:24290141). While LC3s are involved in elongation of the phagophore membrane, the GABARAP/GATE-16 subfamily is essential for a later stage in autophagosome maturation (PubMed:20713600). Through its interaction with the reticulophagy receptor TEX264, participates in the remodeling of subdomains of the endoplasmic reticulum into autophagosomes upon nutrient stress, which then fuse with lysosomes for endoplasmic reticulum turnover (PubMed:31006538, PubMed:31006537). {ECO:0000269|PubMed:20713600, ECO:0000269|PubMed:24290141, ECO:0000269|PubMed:31006537, ECO:0000269|PubMed:31006538}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSTAU1chr20:47768119chr20:33147012ENST00000371856-51472_162170578.0DomainDRBM 1
HgeneSTAU1chr20:47768119chr20:33147151ENST00000371856-51472_162170578.0DomainDRBM 1

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSTAU1chr20:47768119chr20:33147012ENST00000340954-514184_25189497.0DomainDRBM 2
HgeneSTAU1chr20:47768119chr20:33147012ENST00000340954-514286_35489497.0DomainDRBM 3
HgeneSTAU1chr20:47768119chr20:33147012ENST00000340954-51472_16289497.0DomainDRBM 1
HgeneSTAU1chr20:47768119chr20:33147012ENST00000347458-312184_25189497.0DomainDRBM 2
HgeneSTAU1chr20:47768119chr20:33147012ENST00000347458-312286_35489497.0DomainDRBM 3
HgeneSTAU1chr20:47768119chr20:33147012ENST00000347458-31272_16289497.0DomainDRBM 1
HgeneSTAU1chr20:47768119chr20:33147012ENST00000360426-413184_25189497.0DomainDRBM 2
HgeneSTAU1chr20:47768119chr20:33147012ENST00000360426-413286_35489497.0DomainDRBM 3
HgeneSTAU1chr20:47768119chr20:33147012ENST00000360426-41372_16289497.0DomainDRBM 1
HgeneSTAU1chr20:47768119chr20:33147012ENST00000371802-312184_25189503.0DomainDRBM 2
HgeneSTAU1chr20:47768119chr20:33147012ENST00000371802-312286_35489503.0DomainDRBM 3
HgeneSTAU1chr20:47768119chr20:33147012ENST00000371802-31272_16289503.0DomainDRBM 1
HgeneSTAU1chr20:47768119chr20:33147012ENST00000371828-514184_25189503.0DomainDRBM 2
HgeneSTAU1chr20:47768119chr20:33147012ENST00000371828-514286_35489503.0DomainDRBM 3
HgeneSTAU1chr20:47768119chr20:33147012ENST00000371828-51472_16289503.0DomainDRBM 1
HgeneSTAU1chr20:47768119chr20:33147012ENST00000371856-514184_251170578.0DomainDRBM 2
HgeneSTAU1chr20:47768119chr20:33147012ENST00000371856-514286_354170578.0DomainDRBM 3
HgeneSTAU1chr20:47768119chr20:33147151ENST00000340954-514184_25189497.0DomainDRBM 2
HgeneSTAU1chr20:47768119chr20:33147151ENST00000340954-514286_35489497.0DomainDRBM 3
HgeneSTAU1chr20:47768119chr20:33147151ENST00000340954-51472_16289497.0DomainDRBM 1
HgeneSTAU1chr20:47768119chr20:33147151ENST00000347458-312184_25189497.0DomainDRBM 2
HgeneSTAU1chr20:47768119chr20:33147151ENST00000347458-312286_35489497.0DomainDRBM 3
HgeneSTAU1chr20:47768119chr20:33147151ENST00000347458-31272_16289497.0DomainDRBM 1
HgeneSTAU1chr20:47768119chr20:33147151ENST00000360426-413184_25189497.0DomainDRBM 2
HgeneSTAU1chr20:47768119chr20:33147151ENST00000360426-413286_35489497.0DomainDRBM 3
HgeneSTAU1chr20:47768119chr20:33147151ENST00000360426-41372_16289497.0DomainDRBM 1
HgeneSTAU1chr20:47768119chr20:33147151ENST00000371802-312184_25189503.0DomainDRBM 2
HgeneSTAU1chr20:47768119chr20:33147151ENST00000371802-312286_35489503.0DomainDRBM 3
HgeneSTAU1chr20:47768119chr20:33147151ENST00000371802-31272_16289503.0DomainDRBM 1
HgeneSTAU1chr20:47768119chr20:33147151ENST00000371828-514184_25189503.0DomainDRBM 2
HgeneSTAU1chr20:47768119chr20:33147151ENST00000371828-514286_35489503.0DomainDRBM 3
HgeneSTAU1chr20:47768119chr20:33147151ENST00000371828-51472_16289503.0DomainDRBM 1
HgeneSTAU1chr20:47768119chr20:33147151ENST00000371856-514184_251170578.0DomainDRBM 2
HgeneSTAU1chr20:47768119chr20:33147151ENST00000371856-514286_354170578.0DomainDRBM 3


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Fusion Gene Sequence for STAU1-MAP1LC3A


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>87305_87305_1_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000340954_MAP1LC3A_chr20_33147151_ENST00000360668_length(transcript)=1472nt_BP=755nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGGTGGAGTTTTGCTCTTGT
CGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTTTCCCACTTCAGCCTCCCGAT
AAGCTGAGATTACAGAGTTTATTAACCACTTAACCTCTCAGAACTGAACAAAGACAACATTGTTCCTGGAACGCCCTCTTTTTAAAAAAG
AAAGCATAACCCCTACTGTAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGA
TGCAGTCCACCTATAACTACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAG
TGGAACTTTCTGTGGGAGGACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGA
TCCTGCAGAATGAGCCCCTGCCAGAGAGGCTGGAGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCA
AGTTTTTGGTCCCGGACCATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCC
TGCTGGTGAACCAGCACAGCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATA
TGGTCTACGCCTCCCAGGAAACCTTCGGCTTCTGAGCCAGCAGTAGGGGGGCTCGGCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCC
CAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACC
TACTCTGCCCCTGGGTGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGC
TCCCAGCACCCCTGCTGTGTGGTTCATCTTTTTTTTAGGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACC
GCCTGGACCTGCCCACCCCTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTC

>87305_87305_1_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000340954_MAP1LC3A_chr20_33147151_ENST00000360668_length(amino acids)=201AA_BP=112
MFLERPLFKKESITPTVELNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAA
KHDAAAKALRILQNEPLPERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYE

--------------------------------------------------------------
>87305_87305_2_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000340954_MAP1LC3A_chr20_33147151_ENST00000374837_length(transcript)=1472nt_BP=755nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGGTGGAGTTTTGCTCTTGT
CGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTTTCCCACTTCAGCCTCCCGAT
AAGCTGAGATTACAGAGTTTATTAACCACTTAACCTCTCAGAACTGAACAAAGACAACATTGTTCCTGGAACGCCCTCTTTTTAAAAAAG
AAAGCATAACCCCTACTGTAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGA
TGCAGTCCACCTATAACTACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAG
TGGAACTTTCTGTGGGAGGACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGA
TCCTGCAGAATGAGCCCCTGCCAGAGAGGCTGGAGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCA
AGTTTTTGGTCCCGGACCATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCC
TGCTGGTGAACCAGCACAGCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATA
TGGTCTACGCCTCCCAGGAAACCTTCGGCTTCTGAGCCAGCAGTAGGGGGGCTCGGCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCC
CAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACC
TACTCTGCCCCTGGGTGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGC
TCCCAGCACCCCTGCTGTGTGGTTCATCTTTTTTTTAGGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACC
GCCTGGACCTGCCCACCCCTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTC

>87305_87305_2_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000340954_MAP1LC3A_chr20_33147151_ENST00000374837_length(amino acids)=201AA_BP=112
MFLERPLFKKESITPTVELNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAA
KHDAAAKALRILQNEPLPERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYE

--------------------------------------------------------------
>87305_87305_3_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000340954_MAP1LC3A_chr20_33147151_ENST00000397709_length(transcript)=1206nt_BP=755nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGGTGGAGTTTTGCTCTTGT
CGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTTTCCCACTTCAGCCTCCCGAT
AAGCTGAGATTACAGAGTTTATTAACCACTTAACCTCTCAGAACTGAACAAAGACAACATTGTTCCTGGAACGCCCTCTTTTTAAAAAAG
AAAGCATAACCCCTACTGTAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGA
TGCAGTCCACCTATAACTACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAG
TGGAACTTTCTGTGGGAGGACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGA
TCCTGCAGAATGAGCCCCTGCCAGAGAGGCTGGAGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCA
AGTTTTTGGTCCCGGACCATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCC
TGCTGGTGAACCAGCACAGCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATA
TGGTCTACGCCTCCCAGGAAACCTTCGGCTTCTGAGCCAGCAGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCC
CACCGCCTGGACCTGCCCACCCCTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTC

>87305_87305_3_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000340954_MAP1LC3A_chr20_33147151_ENST00000397709_length(amino acids)=201AA_BP=112
MFLERPLFKKESITPTVELNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAA
KHDAAAKALRILQNEPLPERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYE

--------------------------------------------------------------
>87305_87305_4_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000347458_MAP1LC3A_chr20_33147151_ENST00000360668_length(transcript)=1274nt_BP=557nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGAAAGCATAACCCCTACTG
TAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTATAACT
ACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTGGAACTTTCTGTGGGAG
GACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAGCCCC
TGCCAGAGAGGCTGGAGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACC
ATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACA
GCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGG
AAACCTTCGGCTTCTGAGCCAGCAGTAGGGGGGCTCGGCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCC
TGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACCTACTCTGCCCCTGGGTGG
ATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGCTCCCAGCACCCCTGCTGT
GTGGTTCATCTTTTTTTTAGGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCCACCC
CTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCT

>87305_87305_4_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000347458_MAP1LC3A_chr20_33147151_ENST00000360668_length(amino acids)=273AA_BP=28
MPGCGRLSGSSAFAPAAAASLSAPASFDRLPPPARRRPPPPRPLRLFPPFVPSSSPFFPSSFPSSPPPPRTAGRGTSSEQQPESITPTVE
LNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRILQNEPLP
ERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQET

--------------------------------------------------------------
>87305_87305_5_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000347458_MAP1LC3A_chr20_33147151_ENST00000374837_length(transcript)=1274nt_BP=557nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGAAAGCATAACCCCTACTG
TAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTATAACT
ACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTGGAACTTTCTGTGGGAG
GACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAGCCCC
TGCCAGAGAGGCTGGAGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACC
ATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACA
GCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGG
AAACCTTCGGCTTCTGAGCCAGCAGTAGGGGGGCTCGGCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCC
TGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACCTACTCTGCCCCTGGGTGG
ATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGCTCCCAGCACCCCTGCTGT
GTGGTTCATCTTTTTTTTAGGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCCACCC
CTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCT

>87305_87305_5_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000347458_MAP1LC3A_chr20_33147151_ENST00000374837_length(amino acids)=273AA_BP=28
MPGCGRLSGSSAFAPAAAASLSAPASFDRLPPPARRRPPPPRPLRLFPPFVPSSSPFFPSSFPSSPPPPRTAGRGTSSEQQPESITPTVE
LNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRILQNEPLP
ERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQET

--------------------------------------------------------------
>87305_87305_6_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000347458_MAP1LC3A_chr20_33147151_ENST00000397709_length(transcript)=1008nt_BP=557nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGAAAGCATAACCCCTACTG
TAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTATAACT
ACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTGGAACTTTCTGTGGGAG
GACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAGCCCC
TGCCAGAGAGGCTGGAGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACC
ATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACA
GCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGG
AAACCTTCGGCTTCTGAGCCAGCAGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCC
ACCCCTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGAT

>87305_87305_6_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000347458_MAP1LC3A_chr20_33147151_ENST00000397709_length(amino acids)=273AA_BP=28
MPGCGRLSGSSAFAPAAAASLSAPASFDRLPPPARRRPPPPRPLRLFPPFVPSSSPFFPSSFPSSPPPPRTAGRGTSSEQQPESITPTVE
LNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRILQNEPLP
ERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQET

--------------------------------------------------------------
>87305_87305_7_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000360426_MAP1LC3A_chr20_33147151_ENST00000360668_length(transcript)=1349nt_BP=632nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGAGTTTATTAACCACTTAA
CCTCTCAGAACTGAACAAAGACAACATTGTTCCTGGAACGCCCTCTTTTTAAAAAAGAAAGCATAACCCCTACTGTAGAACTAAATGCAC
TGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTATAACTACAACATGAGAGGAG
GTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTGGAACTTTCTGTGGGAGGACAGCAATTTAATG
GCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAGCCCCTGCCAGAGAGGCTGG
AGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACCATGTCAACATGAGCG
AGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACAGCATGGTGAGTGTGT
CCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGGAAACCTTCGGCTTCT
GAGCCAGCAGTAGGGGGGCTCGGCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCT
CTACCGTGGTGGGCTGGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACCTACTCTGCCCCTGGGTGGATCCTGGGCCGGTCG
TGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGCTCCCAGCACCCCTGCTGTGTGGTTCATCTTTTT
TTTAGGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCCACCCCTGAAAGACTGGCCC

>87305_87305_7_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000360426_MAP1LC3A_chr20_33147151_ENST00000360668_length(amino acids)=201AA_BP=112
MFLERPLFKKESITPTVELNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAA
KHDAAAKALRILQNEPLPERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYE

--------------------------------------------------------------
>87305_87305_8_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000360426_MAP1LC3A_chr20_33147151_ENST00000374837_length(transcript)=1349nt_BP=632nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGAGTTTATTAACCACTTAA
CCTCTCAGAACTGAACAAAGACAACATTGTTCCTGGAACGCCCTCTTTTTAAAAAAGAAAGCATAACCCCTACTGTAGAACTAAATGCAC
TGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTATAACTACAACATGAGAGGAG
GTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTGGAACTTTCTGTGGGAGGACAGCAATTTAATG
GCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAGCCCCTGCCAGAGAGGCTGG
AGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACCATGTCAACATGAGCG
AGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACAGCATGGTGAGTGTGT
CCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGGAAACCTTCGGCTTCT
GAGCCAGCAGTAGGGGGGCTCGGCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCT
CTACCGTGGTGGGCTGGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACCTACTCTGCCCCTGGGTGGATCCTGGGCCGGTCG
TGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGCTCCCAGCACCCCTGCTGTGTGGTTCATCTTTTT
TTTAGGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCCACCCCTGAAAGACTGGCCC

>87305_87305_8_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000360426_MAP1LC3A_chr20_33147151_ENST00000374837_length(amino acids)=201AA_BP=112
MFLERPLFKKESITPTVELNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAA
KHDAAAKALRILQNEPLPERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYE

--------------------------------------------------------------
>87305_87305_9_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000360426_MAP1LC3A_chr20_33147151_ENST00000397709_length(transcript)=1083nt_BP=632nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGAGTTTATTAACCACTTAA
CCTCTCAGAACTGAACAAAGACAACATTGTTCCTGGAACGCCCTCTTTTTAAAAAAGAAAGCATAACCCCTACTGTAGAACTAAATGCAC
TGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTATAACTACAACATGAGAGGAG
GTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTGGAACTTTCTGTGGGAGGACAGCAATTTAATG
GCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAGCCCCTGCCAGAGAGGCTGG
AGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACCATGTCAACATGAGCG
AGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACAGCATGGTGAGTGTGT
CCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGGAAACCTTCGGCTTCT
GAGCCAGCAGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCCACCCCTGAAAGACTG
GCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCTCAGGCCTGCCT

>87305_87305_9_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000360426_MAP1LC3A_chr20_33147151_ENST00000397709_length(amino acids)=201AA_BP=112
MFLERPLFKKESITPTVELNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAA
KHDAAAKALRILQNEPLPERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYE

--------------------------------------------------------------
>87305_87305_10_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371792_MAP1LC3A_chr20_33147151_ENST00000360668_length(transcript)=1274nt_BP=557nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGAAAGCATAACCCCTACTG
TAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTATAACT
ACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTGGAACTTTCTGTGGGAG
GACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAGCCCC
TGCCAGAGAGGCTGGAGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACC
ATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACA
GCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGG
AAACCTTCGGCTTCTGAGCCAGCAGTAGGGGGGCTCGGCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCC
TGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACCTACTCTGCCCCTGGGTGG
ATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGCTCCCAGCACCCCTGCTGT
GTGGTTCATCTTTTTTTTAGGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCCACCC
CTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCT

>87305_87305_10_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371792_MAP1LC3A_chr20_33147151_ENST00000360668_length(amino acids)=273AA_BP=28
MPGCGRLSGSSAFAPAAAASLSAPASFDRLPPPARRRPPPPRPLRLFPPFVPSSSPFFPSSFPSSPPPPRTAGRGTSSEQQPESITPTVE
LNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRILQNEPLP
ERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQET

--------------------------------------------------------------
>87305_87305_11_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371792_MAP1LC3A_chr20_33147151_ENST00000374837_length(transcript)=1274nt_BP=557nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGAAAGCATAACCCCTACTG
TAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTATAACT
ACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTGGAACTTTCTGTGGGAG
GACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAGCCCC
TGCCAGAGAGGCTGGAGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACC
ATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACA
GCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGG
AAACCTTCGGCTTCTGAGCCAGCAGTAGGGGGGCTCGGCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCC
TGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACCTACTCTGCCCCTGGGTGG
ATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGCTCCCAGCACCCCTGCTGT
GTGGTTCATCTTTTTTTTAGGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCCACCC
CTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCT

>87305_87305_11_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371792_MAP1LC3A_chr20_33147151_ENST00000374837_length(amino acids)=273AA_BP=28
MPGCGRLSGSSAFAPAAAASLSAPASFDRLPPPARRRPPPPRPLRLFPPFVPSSSPFFPSSFPSSPPPPRTAGRGTSSEQQPESITPTVE
LNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRILQNEPLP
ERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQET

--------------------------------------------------------------
>87305_87305_12_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371792_MAP1LC3A_chr20_33147151_ENST00000397709_length(transcript)=1008nt_BP=557nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGAAAGCATAACCCCTACTG
TAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTATAACT
ACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTGGAACTTTCTGTGGGAG
GACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAGCCCC
TGCCAGAGAGGCTGGAGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACC
ATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACA
GCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGG
AAACCTTCGGCTTCTGAGCCAGCAGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCC
ACCCCTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGAT

>87305_87305_12_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371792_MAP1LC3A_chr20_33147151_ENST00000397709_length(amino acids)=273AA_BP=28
MPGCGRLSGSSAFAPAAAASLSAPASFDRLPPPARRRPPPPRPLRLFPPFVPSSSPFFPSSFPSSPPPPRTAGRGTSSEQQPESITPTVE
LNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRILQNEPLP
ERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQET

--------------------------------------------------------------
>87305_87305_13_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371802_MAP1LC3A_chr20_33147151_ENST00000360668_length(transcript)=1274nt_BP=557nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGAAAGCATAACCCCTACTG
TAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTATAACT
ACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTGGAACTTTCTGTGGGAG
GACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAGCCCC
TGCCAGAGAGGCTGGAGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACC
ATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACA
GCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGG
AAACCTTCGGCTTCTGAGCCAGCAGTAGGGGGGCTCGGCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCC
TGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACCTACTCTGCCCCTGGGTGG
ATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGCTCCCAGCACCCCTGCTGT
GTGGTTCATCTTTTTTTTAGGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCCACCC
CTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCT

>87305_87305_13_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371802_MAP1LC3A_chr20_33147151_ENST00000360668_length(amino acids)=273AA_BP=28
MPGCGRLSGSSAFAPAAAASLSAPASFDRLPPPARRRPPPPRPLRLFPPFVPSSSPFFPSSFPSSPPPPRTAGRGTSSEQQPESITPTVE
LNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRILQNEPLP
ERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQET

--------------------------------------------------------------
>87305_87305_14_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371802_MAP1LC3A_chr20_33147151_ENST00000374837_length(transcript)=1274nt_BP=557nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGAAAGCATAACCCCTACTG
TAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTATAACT
ACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTGGAACTTTCTGTGGGAG
GACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAGCCCC
TGCCAGAGAGGCTGGAGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACC
ATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACA
GCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGG
AAACCTTCGGCTTCTGAGCCAGCAGTAGGGGGGCTCGGCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCC
TGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACCTACTCTGCCCCTGGGTGG
ATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGCTCCCAGCACCCCTGCTGT
GTGGTTCATCTTTTTTTTAGGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCCACCC
CTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCT

>87305_87305_14_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371802_MAP1LC3A_chr20_33147151_ENST00000374837_length(amino acids)=273AA_BP=28
MPGCGRLSGSSAFAPAAAASLSAPASFDRLPPPARRRPPPPRPLRLFPPFVPSSSPFFPSSFPSSPPPPRTAGRGTSSEQQPESITPTVE
LNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRILQNEPLP
ERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQET

--------------------------------------------------------------
>87305_87305_15_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371802_MAP1LC3A_chr20_33147151_ENST00000397709_length(transcript)=1008nt_BP=557nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGAAAGCATAACCCCTACTG
TAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTATAACT
ACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTGGAACTTTCTGTGGGAG
GACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAGCCCC
TGCCAGAGAGGCTGGAGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACC
ATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACA
GCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGG
AAACCTTCGGCTTCTGAGCCAGCAGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCC
ACCCCTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGAT

>87305_87305_15_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371802_MAP1LC3A_chr20_33147151_ENST00000397709_length(amino acids)=273AA_BP=28
MPGCGRLSGSSAFAPAAAASLSAPASFDRLPPPARRRPPPPRPLRLFPPFVPSSSPFFPSSFPSSPPPPRTAGRGTSSEQQPESITPTVE
LNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRILQNEPLP
ERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQET

--------------------------------------------------------------
>87305_87305_16_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371828_MAP1LC3A_chr20_33147151_ENST00000360668_length(transcript)=1472nt_BP=755nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGGTGGAGTTTTGCTCTTGT
CGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTTTCCCACTTCAGCCTCCCGAT
AAGCTGAGATTACAGAGTTTATTAACCACTTAACCTCTCAGAACTGAACAAAGACAACATTGTTCCTGGAACGCCCTCTTTTTAAAAAAG
AAAGCATAACCCCTACTGTAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGA
TGCAGTCCACCTATAACTACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAG
TGGAACTTTCTGTGGGAGGACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGA
TCCTGCAGAATGAGCCCCTGCCAGAGAGGCTGGAGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCA
AGTTTTTGGTCCCGGACCATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCC
TGCTGGTGAACCAGCACAGCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATA
TGGTCTACGCCTCCCAGGAAACCTTCGGCTTCTGAGCCAGCAGTAGGGGGGCTCGGCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCC
CAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACC
TACTCTGCCCCTGGGTGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGC
TCCCAGCACCCCTGCTGTGTGGTTCATCTTTTTTTTAGGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACC
GCCTGGACCTGCCCACCCCTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTC

>87305_87305_16_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371828_MAP1LC3A_chr20_33147151_ENST00000360668_length(amino acids)=201AA_BP=112
MFLERPLFKKESITPTVELNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAA
KHDAAAKALRILQNEPLPERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYE

--------------------------------------------------------------
>87305_87305_17_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371828_MAP1LC3A_chr20_33147151_ENST00000374837_length(transcript)=1472nt_BP=755nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGGTGGAGTTTTGCTCTTGT
CGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTTTCCCACTTCAGCCTCCCGAT
AAGCTGAGATTACAGAGTTTATTAACCACTTAACCTCTCAGAACTGAACAAAGACAACATTGTTCCTGGAACGCCCTCTTTTTAAAAAAG
AAAGCATAACCCCTACTGTAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGA
TGCAGTCCACCTATAACTACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAG
TGGAACTTTCTGTGGGAGGACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGA
TCCTGCAGAATGAGCCCCTGCCAGAGAGGCTGGAGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCA
AGTTTTTGGTCCCGGACCATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCC
TGCTGGTGAACCAGCACAGCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATA
TGGTCTACGCCTCCCAGGAAACCTTCGGCTTCTGAGCCAGCAGTAGGGGGGCTCGGCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCC
CAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACC
TACTCTGCCCCTGGGTGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGC
TCCCAGCACCCCTGCTGTGTGGTTCATCTTTTTTTTAGGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACC
GCCTGGACCTGCCCACCCCTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTC

>87305_87305_17_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371828_MAP1LC3A_chr20_33147151_ENST00000374837_length(amino acids)=201AA_BP=112
MFLERPLFKKESITPTVELNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAA
KHDAAAKALRILQNEPLPERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYE

--------------------------------------------------------------
>87305_87305_18_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371828_MAP1LC3A_chr20_33147151_ENST00000397709_length(transcript)=1206nt_BP=755nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGGTGGAGTTTTGCTCTTGT
CGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTTTCCCACTTCAGCCTCCCGAT
AAGCTGAGATTACAGAGTTTATTAACCACTTAACCTCTCAGAACTGAACAAAGACAACATTGTTCCTGGAACGCCCTCTTTTTAAAAAAG
AAAGCATAACCCCTACTGTAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGA
TGCAGTCCACCTATAACTACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAG
TGGAACTTTCTGTGGGAGGACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGA
TCCTGCAGAATGAGCCCCTGCCAGAGAGGCTGGAGGTGATCATCGAGCGCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCA
AGTTTTTGGTCCCGGACCATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCC
TGCTGGTGAACCAGCACAGCATGGTGAGTGTGTCCACGCCCATCGCGGACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATA
TGGTCTACGCCTCCCAGGAAACCTTCGGCTTCTGAGCCAGCAGCCCCTGCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCC
CACCGCCTGGACCTGCCCACCCCTGAAAGACTGGCCCCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTC

>87305_87305_18_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371828_MAP1LC3A_chr20_33147151_ENST00000397709_length(amino acids)=201AA_BP=112
MFLERPLFKKESITPTVELNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAA
KHDAAAKALRILQNEPLPERLEVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYE

--------------------------------------------------------------
>87305_87305_19_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371856_MAP1LC3A_chr20_33147012_ENST00000360668_length(transcript)=1694nt_BP=921nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGAGTTTATTAACCACTTAA
CCTCTCAGAACTGAACAAAGACAACATTGTTCCTGGAACGCCCTCTTTTTAAAAAAGGTAGAACTTTAGACTTCATAGCACTGAATTAAC
CTGCACTGAAAGCTGTTTACCTGCATTTGTTCACTTTTGTTGAAAGTGACCATGTCTCAAGTTCAAGTGCAAGTTCAGAACCCATCTGCT
GCTCTCTCAGGGAGCCAAATACTGAACAAGAACCAGTCTCTTCTCTCACAGCCTTTGATGAGTATTCCTTCTACTACTAGCTCTCTGCCC
TCTGAAAATGCAGGTAGACCCATTCAAAACTCTGCTTTACCCTCTGCATCTATTACATCCACCAGTGCAGCTGCAGAAAGCATAACCCCT
ACTGTAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTAT
AACTACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTGGAACTTTCTGTG
GGAGGACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAG
CCCCTGCCAGAGAGGCTGGAGCCGACCGCTGTAAGGAGGTACAGCAGATCCGCGACCAGCACCCCAGCAAAATCCCGGTGATCATCGAGC
GCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACCATGTCAACATGAGCGAGTTGGTCAAGATCA
TCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACAGCATGGTGAGTGTGTCCACGCCCATCGCGG
ACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGGAAACCTTCGGCTTCTGAGCCAGCAGTAGGG
GGGCTCGGCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCT
GGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACCTACTCTGCCCCTGGGTGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCC
TCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGCTCCCAGCACCCCTGCTGTGTGGTTCATCTTTTTTTTAGGCCCCTGCCT
GTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCCACCCCTGAAAGACTGGCCCCTGGCTCCCCGCCCC

>87305_87305_19_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371856_MAP1LC3A_chr20_33147012_ENST00000360668_length(amino acids)=202AA_BP=183
MFTCICSLLLKVTMSQVQVQVQNPSAALSGSQILNKNQSLLSQPLMSIPSTTSSLPSENAGRPIQNSALPSASITSTSAAAESITPTVEL
NALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRILQNEPLPE

--------------------------------------------------------------
>87305_87305_20_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371856_MAP1LC3A_chr20_33147012_ENST00000374837_length(transcript)=1694nt_BP=921nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGAGTTTATTAACCACTTAA
CCTCTCAGAACTGAACAAAGACAACATTGTTCCTGGAACGCCCTCTTTTTAAAAAAGGTAGAACTTTAGACTTCATAGCACTGAATTAAC
CTGCACTGAAAGCTGTTTACCTGCATTTGTTCACTTTTGTTGAAAGTGACCATGTCTCAAGTTCAAGTGCAAGTTCAGAACCCATCTGCT
GCTCTCTCAGGGAGCCAAATACTGAACAAGAACCAGTCTCTTCTCTCACAGCCTTTGATGAGTATTCCTTCTACTACTAGCTCTCTGCCC
TCTGAAAATGCAGGTAGACCCATTCAAAACTCTGCTTTACCCTCTGCATCTATTACATCCACCAGTGCAGCTGCAGAAAGCATAACCCCT
ACTGTAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTAT
AACTACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTGGAACTTTCTGTG
GGAGGACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAG
CCCCTGCCAGAGAGGCTGGAGCCGACCGCTGTAAGGAGGTACAGCAGATCCGCGACCAGCACCCCAGCAAAATCCCGGTGATCATCGAGC
GCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACCATGTCAACATGAGCGAGTTGGTCAAGATCA
TCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACAGCATGGTGAGTGTGTCCACGCCCATCGCGG
ACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGGAAACCTTCGGCTTCTGAGCCAGCAGTAGGG
GGGCTCGGCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCT
GGGCAGGCATGTGCCCCCCTAGTCAGAGGGCACCAACCCACCTACTCTGCCCCTGGGTGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCC
TCTGGGTGCTGGCTGGTGGGATGGGGGAGGGTGGGGAGCAGCTCCCAGCACCCCTGCTGTGTGGTTCATCTTTTTTTTAGGCCCCTGCCT
GTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCCACCCCTGAAAGACTGGCCCCTGGCTCCCCGCCCC

>87305_87305_20_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371856_MAP1LC3A_chr20_33147012_ENST00000374837_length(amino acids)=202AA_BP=183
MFTCICSLLLKVTMSQVQVQVQNPSAALSGSQILNKNQSLLSQPLMSIPSTTSSLPSENAGRPIQNSALPSASITSTSAAAESITPTVEL
NALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRILQNEPLPE

--------------------------------------------------------------
>87305_87305_21_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371856_MAP1LC3A_chr20_33147012_ENST00000397709_length(transcript)=1428nt_BP=921nt
ACTTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCTCCCGCTTCCTTTGACC
GCCTCCCCCCCCCGGCCCGGCGGCGCCCGCCTCCTCCACGGCCACTCCGCCTCTTCCCTCCCTTCGTCCCTTCTTCCTCTCCCTTTTTTC
CTTCTTCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCCGGCCGGGGGACGAGCTCGGAGCAGCAGCCAGAGTTTATTAACCACTTAA
CCTCTCAGAACTGAACAAAGACAACATTGTTCCTGGAACGCCCTCTTTTTAAAAAAGGTAGAACTTTAGACTTCATAGCACTGAATTAAC
CTGCACTGAAAGCTGTTTACCTGCATTTGTTCACTTTTGTTGAAAGTGACCATGTCTCAAGTTCAAGTGCAAGTTCAGAACCCATCTGCT
GCTCTCTCAGGGAGCCAAATACTGAACAAGAACCAGTCTCTTCTCTCACAGCCTTTGATGAGTATTCCTTCTACTACTAGCTCTCTGCCC
TCTGAAAATGCAGGTAGACCCATTCAAAACTCTGCTTTACCCTCTGCATCTATTACATCCACCAGTGCAGCTGCAGAAAGCATAACCCCT
ACTGTAGAACTAAATGCACTGTGCATGAAACTTGGAAAAAAACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTAT
AACTACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCTTTACTTTATCAAGTGGAACTTTCTGTG
GGAGGACAGCAATTTAATGGCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAG
CCCCTGCCAGAGAGGCTGGAGCCGACCGCTGTAAGGAGGTACAGCAGATCCGCGACCAGCACCCCAGCAAAATCCCGGTGATCATCGAGC
GCTACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGACCATGTCAACATGAGCGAGTTGGTCAAGATCA
TCCGGCGCCGCCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCTGGTGAACCAGCACAGCATGGTGAGTGTGTCCACGCCCATCGCGG
ACATCTACGAGCAGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCCTCCCAGGAAACCTTCGGCTTCTGAGCCAGCAGCCCCT
GCCTGTCTGCCCATCTGCCCCTCACCCACCCGAGGCTCTGCCCACCGCCTGGACCTGCCCACCCCTGAAAGACTGGCCCCTGGCTCCCCG

>87305_87305_21_STAU1-MAP1LC3A_STAU1_chr20_47768119_ENST00000371856_MAP1LC3A_chr20_33147012_ENST00000397709_length(amino acids)=202AA_BP=183
MFTCICSLLLKVTMSQVQVQVQNPSAALSGSQILNKNQSLLSQPLMSIPSTTSSLPSENAGRPIQNSALPSASITSTSAAAESITPTVEL
NALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRILQNEPLPE

--------------------------------------------------------------

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Fusion Gene PPI Analysis for STAU1-MAP1LC3A


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for STAU1-MAP1LC3A


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for STAU1-MAP1LC3A


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource