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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:STK3-COX6C (FusionGDB2 ID:87568)

Fusion Gene Summary for STK3-COX6C

check button Fusion gene summary
Fusion gene informationFusion gene name: STK3-COX6C
Fusion gene ID: 87568
HgeneTgene
Gene symbol

STK3

COX6C

Gene ID

8428

1345

Gene nameserine/threonine kinase 24cytochrome c oxidase subunit 6C
SynonymsHEL-S-95|MST3|MST3B|STE20|STK3-
Cytomap

13q32.2

8q22.2

Type of geneprotein-codingprotein-coding
Descriptionserine/threonine-protein kinase 24STE20-like kinase 3STE20-like kinase MST3epididymis secretory protein Li 95mammalian STE20-like protein kinase 3serine/threonine kinase 24 (STE20 homolog, yeast)sterile 20-like kinase 3cytochrome c oxidase subunit 6Ccytochrome c oxidase polypeptide VIccytochrome c oxidase subunit VIc preproteinepididymis secretory sperm binding protein
Modification date2020031320200313
UniProtAcc.

P09669

Ensembl transtripts involved in fusion geneENST00000419617, ENST00000523601, 
ENST00000521768, 		ENST00000297564, 
ENST00000517682, ENST00000523016, 
ENST00000518171, ENST00000520271, 
ENST00000520468, ENST00000522940, 
ENST00000524245, 
Fusion gene scores* DoF score24 X 16 X 11=422410 X 8 X 6=480
# samples 3013
** MAII scorelog2(30/4224*10)=-3.81557542886257
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(13/480*10)=-1.88452278258006
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: STK3 [Title/Abstract] AND COX6C [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointSTK3(99718695)-COX6C(100899846), # samples:3
Anticipated loss of major functional domain due to fusion event.STK3-COX6C seems lost the major protein functional domain in Hgene partner, which is a IUPHAR drug target due to the frame-shifted ORF.
STK3-COX6C seems lost the major protein functional domain in Hgene partner, which is a kinase due to the frame-shifted ORF.
STK3-COX6C seems lost the major protein functional domain in Tgene partner, which is a CGC due to the frame-shifted ORF.
STK3-COX6C seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneSTK3

GO:0006468

protein phosphorylation

19604147

HgeneSTK3

GO:0042542

response to hydrogen peroxide

22291017

HgeneSTK3

GO:0046777

protein autophosphorylation

17046825|17657516


check buttonFusion gene breakpoints across STK3 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across COX6C (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4ESCATCGA-L5-A4OT-01ASTK3chr8

99718695

-COX6Cchr8

100899846

-
ChimerDB4ESCATCGA-L5-A4OTSTK3chr8

99718694

-COX6Cchr8

100899846

-
ChimerDB4ESCATCGA-L5-A4OTSTK3chr8

99718695

-COX6Cchr8

100899846

-


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Fusion Gene ORF analysis for STK3-COX6C

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
Frame-shiftENST00000419617ENST00000297564STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000419617ENST00000297564STK3chr8

99718694

-COX6Cchr8

100899846

-
Frame-shiftENST00000419617ENST00000517682STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000419617ENST00000517682STK3chr8

99718694

-COX6Cchr8

100899846

-
Frame-shiftENST00000419617ENST00000523016STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000419617ENST00000523016STK3chr8

99718694

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000297564STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000297564STK3chr8

99718694

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000517682STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000517682STK3chr8

99718694

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000518171STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000518171STK3chr8

99718694

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000520271STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000520271STK3chr8

99718694

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000520468STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000520468STK3chr8

99718694

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000522940STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000522940STK3chr8

99718694

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000524245STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000524245STK3chr8

99718694

-COX6Cchr8

100899846

-
In-frameENST00000419617ENST00000518171STK3chr8

99718695

-COX6Cchr8

100899846

-
In-frameENST00000419617ENST00000518171STK3chr8

99718694

-COX6Cchr8

100899846

-
In-frameENST00000419617ENST00000520271STK3chr8

99718695

-COX6Cchr8

100899846

-
In-frameENST00000419617ENST00000520271STK3chr8

99718694

-COX6Cchr8

100899846

-
In-frameENST00000419617ENST00000520468STK3chr8

99718695

-COX6Cchr8

100899846

-
In-frameENST00000419617ENST00000520468STK3chr8

99718694

-COX6Cchr8

100899846

-
In-frameENST00000419617ENST00000522940STK3chr8

99718695

-COX6Cchr8

100899846

-
In-frameENST00000419617ENST00000522940STK3chr8

99718694

-COX6Cchr8

100899846

-
In-frameENST00000419617ENST00000524245STK3chr8

99718695

-COX6Cchr8

100899846

-
In-frameENST00000419617ENST00000524245STK3chr8

99718694

-COX6Cchr8

100899846

-
In-frameENST00000523601ENST00000523016STK3chr8

99718695

-COX6Cchr8

100899846

-
In-frameENST00000523601ENST00000523016STK3chr8

99718694

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000297564STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000297564STK3chr8

99718694

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000517682STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000517682STK3chr8

99718694

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000518171STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000518171STK3chr8

99718694

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000520271STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000520271STK3chr8

99718694

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000520468STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000520468STK3chr8

99718694

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000522940STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000522940STK3chr8

99718694

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000523016STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000523016STK3chr8

99718694

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000524245STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000524245STK3chr8

99718694

-COX6Cchr8

100899846

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000419617STK3chr899718695-ENST00000520468COX6Cchr8100899846-135482545938297
ENST00000419617STK3chr899718695-ENST00000520271COX6Cchr8100899846-107182545938297
ENST00000419617STK3chr899718695-ENST00000524245COX6Cchr8100899846-107082545938297
ENST00000419617STK3chr899718695-ENST00000522940COX6Cchr8100899846-106982545938297
ENST00000419617STK3chr899718695-ENST00000518171COX6Cchr8100899846-134582545938297
ENST00000523601STK3chr899718695-ENST00000523016COX6Cchr8100899846-172611682621281339
ENST00000419617STK3chr899718694-ENST00000520468COX6Cchr8100899846-135482545938297
ENST00000419617STK3chr899718694-ENST00000520271COX6Cchr8100899846-107182545938297
ENST00000419617STK3chr899718694-ENST00000524245COX6Cchr8100899846-107082545938297
ENST00000419617STK3chr899718694-ENST00000522940COX6Cchr8100899846-106982545938297
ENST00000419617STK3chr899718694-ENST00000518171COX6Cchr8100899846-134582545938297
ENST00000523601STK3chr899718694-ENST00000523016COX6Cchr8100899846-172611682621281339

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000419617ENST00000520468STK3chr899718695-COX6Cchr8100899846-0.0005973530.99940264
ENST00000419617ENST00000520271STK3chr899718695-COX6Cchr8100899846-0.0008014740.9991985
ENST00000419617ENST00000524245STK3chr899718695-COX6Cchr8100899846-0.0008048120.99919516
ENST00000419617ENST00000522940STK3chr899718695-COX6Cchr8100899846-0.0007920480.99920803
ENST00000419617ENST00000518171STK3chr899718695-COX6Cchr8100899846-0.0011205120.9988795
ENST00000523601ENST00000523016STK3chr899718695-COX6Cchr8100899846-0.0002257260.9997743
ENST00000419617ENST00000520468STK3chr899718694-COX6Cchr8100899846-0.0005973530.99940264
ENST00000419617ENST00000520271STK3chr899718694-COX6Cchr8100899846-0.0008014740.9991985
ENST00000419617ENST00000524245STK3chr899718694-COX6Cchr8100899846-0.0008048120.99919516
ENST00000419617ENST00000522940STK3chr899718694-COX6Cchr8100899846-0.0007920480.99920803
ENST00000419617ENST00000518171STK3chr899718694-COX6Cchr8100899846-0.0011205120.9988795
ENST00000523601ENST00000523016STK3chr899718694-COX6Cchr8100899846-0.0002257260.9997743

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Fusion Genomic Features for STK3-COX6C


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for STK3-COX6C


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr8:99718695/chr8:100899846)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.COX6C

P09669

FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Electrons originating from reduced cytochrome c in the intermembrane space (IMS) are transferred via the dinuclear copper A center (CU(A)) of subunit 2 and heme A of subunit 1 to the active site in subunit 1, a binuclear center (BNC) formed by heme A3 and copper B (CU(B)). The BNC reduces molecular oxygen to 2 water molecules using 4 electrons from cytochrome c in the IMS and 4 protons from the mitochondrial matrix. {ECO:0000250|UniProtKB:P04038}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSTK3chr8:99718694chr8:100899846ENST00000419617-61133_41228492.0Nucleotide bindingATP
HgeneSTK3chr8:99718695chr8:100899846ENST00000419617-61133_41228492.0Nucleotide bindingATP
TgeneCOX6Cchr8:99718694chr8:100899846ENST000002975641455_753896.33333333333333Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718694chr8:100899846ENST000005176821455_753897.0Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718694chr8:100899846ENST000005181711455_7538181.33333333333334Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718694chr8:100899846ENST000005202711455_753849.666666666666664Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718694chr8:100899846ENST000005204681455_753862.666666666666664Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718694chr8:100899846ENST000005229401455_75387.333333333333333Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718694chr8:100899846ENST000005230161355_753876.0Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718694chr8:100899846ENST000005242451455_753868.33333333333333Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718695chr8:100899846ENST000002975641455_753896.33333333333333Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718695chr8:100899846ENST000005176821455_753897.0Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718695chr8:100899846ENST000005181711455_7538181.33333333333334Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718695chr8:100899846ENST000005202711455_753849.666666666666664Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718695chr8:100899846ENST000005204681455_753862.666666666666664Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718695chr8:100899846ENST000005229401455_75387.333333333333333Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718695chr8:100899846ENST000005230161355_753876.0Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718695chr8:100899846ENST000005242451455_753868.33333333333333Topological domainMitochondrial intermembrane

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSTK3chr8:99718694chr8:100899846ENST00000419617-611287_328228492.0Coiled coilOntology_term=ECO:0000255
HgeneSTK3chr8:99718694chr8:100899846ENST00000419617-611442_475228492.0Coiled coilOntology_term=ECO:0000255
HgeneSTK3chr8:99718695chr8:100899846ENST00000419617-611287_328228492.0Coiled coilOntology_term=ECO:0000255
HgeneSTK3chr8:99718695chr8:100899846ENST00000419617-611442_475228492.0Coiled coilOntology_term=ECO:0000255
HgeneSTK3chr8:99718694chr8:100899846ENST00000419617-611308_314228492.0Compositional biasNote=Poly-Glu
HgeneSTK3chr8:99718694chr8:100899846ENST00000419617-611370_375228492.0Compositional biasNote=Poly-Glu
HgeneSTK3chr8:99718695chr8:100899846ENST00000419617-611308_314228492.0Compositional biasNote=Poly-Glu
HgeneSTK3chr8:99718695chr8:100899846ENST00000419617-611370_375228492.0Compositional biasNote=Poly-Glu
HgeneSTK3chr8:99718694chr8:100899846ENST00000419617-61127_278228492.0DomainProtein kinase
HgeneSTK3chr8:99718694chr8:100899846ENST00000419617-611437_484228492.0DomainSARAH
HgeneSTK3chr8:99718695chr8:100899846ENST00000419617-61127_278228492.0DomainProtein kinase
HgeneSTK3chr8:99718695chr8:100899846ENST00000419617-611437_484228492.0DomainSARAH
TgeneCOX6Cchr8:99718694chr8:100899846ENST00000297564141_133896.33333333333333Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718694chr8:100899846ENST00000517682141_133897.0Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718694chr8:100899846ENST00000518171141_1338181.33333333333334Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718694chr8:100899846ENST00000520271141_133849.666666666666664Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718694chr8:100899846ENST00000520468141_133862.666666666666664Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718694chr8:100899846ENST00000522940141_13387.333333333333333Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718694chr8:100899846ENST00000523016131_133876.0Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718694chr8:100899846ENST00000524245141_133868.33333333333333Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000297564141_133896.33333333333333Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000517682141_133897.0Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000518171141_1338181.33333333333334Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000520271141_133849.666666666666664Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000520468141_133862.666666666666664Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000522940141_13387.333333333333333Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000523016131_133876.0Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000524245141_133868.33333333333333Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718694chr8:100899846ENST000002975641414_543896.33333333333333TransmembraneHelical
TgeneCOX6Cchr8:99718694chr8:100899846ENST000005176821414_543897.0TransmembraneHelical
TgeneCOX6Cchr8:99718694chr8:100899846ENST000005181711414_5438181.33333333333334TransmembraneHelical
TgeneCOX6Cchr8:99718694chr8:100899846ENST000005202711414_543849.666666666666664TransmembraneHelical
TgeneCOX6Cchr8:99718694chr8:100899846ENST000005204681414_543862.666666666666664TransmembraneHelical
TgeneCOX6Cchr8:99718694chr8:100899846ENST000005229401414_54387.333333333333333TransmembraneHelical
TgeneCOX6Cchr8:99718694chr8:100899846ENST000005230161314_543876.0TransmembraneHelical
TgeneCOX6Cchr8:99718694chr8:100899846ENST000005242451414_543868.33333333333333TransmembraneHelical
TgeneCOX6Cchr8:99718695chr8:100899846ENST000002975641414_543896.33333333333333TransmembraneHelical
TgeneCOX6Cchr8:99718695chr8:100899846ENST000005176821414_543897.0TransmembraneHelical
TgeneCOX6Cchr8:99718695chr8:100899846ENST000005181711414_5438181.33333333333334TransmembraneHelical
TgeneCOX6Cchr8:99718695chr8:100899846ENST000005202711414_543849.666666666666664TransmembraneHelical
TgeneCOX6Cchr8:99718695chr8:100899846ENST000005204681414_543862.666666666666664TransmembraneHelical
TgeneCOX6Cchr8:99718695chr8:100899846ENST000005229401414_54387.333333333333333TransmembraneHelical
TgeneCOX6Cchr8:99718695chr8:100899846ENST000005230161314_543876.0TransmembraneHelical
TgeneCOX6Cchr8:99718695chr8:100899846ENST000005242451414_543868.33333333333333TransmembraneHelical


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Fusion Gene Sequence for STK3-COX6C


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>87568_87568_1_STK3-COX6C_STK3_chr8_99718694_ENST00000419617_COX6C_chr8_100899846_ENST00000518171_length(transcript)=1345nt_BP=825nt
CCGCGGAGTTACGGGAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTGGTGCCCTAGGCTCGGCCGGCCGGTGCCCCGGCTCCTTTCC
TCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAG
CTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAA
GCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATA
ATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGC
GCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGA
CTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCA
GATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATT
CAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGAT
ATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAG
GAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGGGTCTCCCTCTGTCACCCAGGCCGTAGTGCTGTAGT
GCGATCATGGCTCACTGCAGCCTCAACCTCCCAGGCTCAAGGGATCTTCCTGCCTCAGCCTCCCAAGAAGCTGGCACTATAGGCATGTGC
CACCACACCTGGCTAACTTCTTTATTTTTAGTAGAGACAGGGTTTCACCATATTACCTGGGCTGTGCTTGAATTCCTGGGCTCAGGCGAT
CCGTCCACCTTGGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCACTGTGCCTGGCATAATTTTGGTATTTTTTGATAGTAGCCATCC

>87568_87568_1_STK3-COX6C_STK3_chr8_99718694_ENST00000419617_COX6C_chr8_100899846_ENST00000518171_length(amino acids)=297AA_BP=260
MWCPRLGRPVPRLLSSFRPSPSTRSLSLSPAAMEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQV
PVESDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIK
AGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITSIEMAEGKPPYADIHPMRFRVADQRKKA

--------------------------------------------------------------
>87568_87568_2_STK3-COX6C_STK3_chr8_99718694_ENST00000419617_COX6C_chr8_100899846_ENST00000520271_length(transcript)=1071nt_BP=825nt
CCGCGGAGTTACGGGAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTGGTGCCCTAGGCTCGGCCGGCCGGTGCCCCGGCTCCTTTCC
TCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAG
CTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAA
GCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATA
ATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGC
GCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGA
CTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCA
GATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATT
CAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGAT
ATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAG
GAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGAATTTCTTCAGGTTGAATTACCTAGAAGTTTGTCAC

>87568_87568_2_STK3-COX6C_STK3_chr8_99718694_ENST00000419617_COX6C_chr8_100899846_ENST00000520271_length(amino acids)=297AA_BP=260
MWCPRLGRPVPRLLSSFRPSPSTRSLSLSPAAMEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQV
PVESDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIK
AGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITSIEMAEGKPPYADIHPMRFRVADQRKKA

--------------------------------------------------------------
>87568_87568_3_STK3-COX6C_STK3_chr8_99718694_ENST00000419617_COX6C_chr8_100899846_ENST00000520468_length(transcript)=1354nt_BP=825nt
CCGCGGAGTTACGGGAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTGGTGCCCTAGGCTCGGCCGGCCGGTGCCCCGGCTCCTTTCC
TCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAG
CTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAA
GCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATA
ATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGC
GCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGA
CTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCA
GATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATT
CAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGAT
ATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAG
GAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGAATTTCTTCAGGTTGAATTACCTAGAAGTTTGTCAC
TGACTTGTGTTCCTGAACTATGACACATGAATATGTGGGCTAAGAAATAGTTCCTCTTGATAAATAAACAATTAACAAATACTTTGGACA
GTAAGTCTTTCTCAGTTCTTAATGATAATGCAGGGCACTTACTAGCATAAGAATTGGTTTGGGATTTAACTGTTTATGAAGCTAACTTGA
TTTCCGTGTTTTGTTAAAATTTCATTGTTCTAGCACATCTTTAACTGTGATAGTTTGTCCGTTTCATTGCAGTTACTTGGTCTTGGGCTA
TGGATTAAAAAGTGTTCTTCATGAGCCTGTAAGACTACTGTACTGTGGGCTCTAAGAAGAGATAGAATCCTAATAAAATCTATCCTTGGC

>87568_87568_3_STK3-COX6C_STK3_chr8_99718694_ENST00000419617_COX6C_chr8_100899846_ENST00000520468_length(amino acids)=297AA_BP=260
MWCPRLGRPVPRLLSSFRPSPSTRSLSLSPAAMEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQV
PVESDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIK
AGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITSIEMAEGKPPYADIHPMRFRVADQRKKA

--------------------------------------------------------------
>87568_87568_4_STK3-COX6C_STK3_chr8_99718694_ENST00000419617_COX6C_chr8_100899846_ENST00000522940_length(transcript)=1069nt_BP=825nt
CCGCGGAGTTACGGGAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTGGTGCCCTAGGCTCGGCCGGCCGGTGCCCCGGCTCCTTTCC
TCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAG
CTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAA
GCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATA
ATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGC
GCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGA
CTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCA
GATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATT
CAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGAT
ATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAG
GAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGAATTTCTTCAGGTTGAATTACCTAGAAGTTTGTCAC

>87568_87568_4_STK3-COX6C_STK3_chr8_99718694_ENST00000419617_COX6C_chr8_100899846_ENST00000522940_length(amino acids)=297AA_BP=260
MWCPRLGRPVPRLLSSFRPSPSTRSLSLSPAAMEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQV
PVESDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIK
AGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITSIEMAEGKPPYADIHPMRFRVADQRKKA

--------------------------------------------------------------
>87568_87568_5_STK3-COX6C_STK3_chr8_99718694_ENST00000419617_COX6C_chr8_100899846_ENST00000524245_length(transcript)=1070nt_BP=825nt
CCGCGGAGTTACGGGAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTGGTGCCCTAGGCTCGGCCGGCCGGTGCCCCGGCTCCTTTCC
TCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAG
CTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAA
GCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATA
ATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGC
GCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGA
CTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCA
GATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATT
CAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGAT
ATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAG
GAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGAATTTCTTCAGGTTGAATTACCTAGAAGTTTGTCAC

>87568_87568_5_STK3-COX6C_STK3_chr8_99718694_ENST00000419617_COX6C_chr8_100899846_ENST00000524245_length(amino acids)=297AA_BP=260
MWCPRLGRPVPRLLSSFRPSPSTRSLSLSPAAMEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQV
PVESDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIK
AGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITSIEMAEGKPPYADIHPMRFRVADQRKKA

--------------------------------------------------------------
>87568_87568_6_STK3-COX6C_STK3_chr8_99718694_ENST00000523601_COX6C_chr8_100899846_ENST00000523016_length(transcript)=1726nt_BP=1168nt
GTGCAGAACCGTTTGGTTTTCCCGAGGGGTAGGCAGAATTTCCAACCCCACGAGCTGCTCCCTCTTTCCGCAAACCTCCTAACCCCGGGG
TTTTTCCATAAATGTGTTTACTTCGTCCACGCCAGCCTGCGAAGTTCCAAAATGGAGTCTGGGCCACGCCGGCGTTCTGGGCACGACTAC
GGTCTCTTGAAAAGATTTGGAATTGACCATGTAGATAATCTCTGAGAGCAGTTCTTAAAGTGTAATCCAGAACCGGTGGAACTTGCTAGA
AACGCATATTCTTCGGACCCCCTCCAAATCTGCTGAATCTGAGATTGTGGAGGCCATTCAATGTCCCTTCTTCAGGAATTTGGAAAAAGG
ATGGAGAGATCTCTCTGAGCTAGACTCTTCAGTGGAGGAAATGTTACAACTCATGGACAGTGGCATTACCATCTGCCTTAGGAACGGAGC
AGCCTCTGTCTTCAAGAAAAAAGAATGGAGCACACAAGGAGAAGAAAACAAGCAAGACAGTAAACTAAAAAAGCTGAGTGAAGACAGTTT
GACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAAGCAATACACAAGGAATC
CGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATAATGCAGCAATGTGACAG
CCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGCGCTGGCTCTGTCTCAGA
CATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGACTAGAATATTTGCACTT
TATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCAGATTTTGGAGTGGCTGG
TCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATTCAAGAAATAGGCTATAA
CTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGATATACATCCAATGAGGTT
TCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAGGAGATGAGGAAGGCTGG
TATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGGTAATATGGTTATTTGAAGTTACTTAAAAAAAAATTTCTAATTGTGGTAAAAT
GCAAATACAGGTGACTGTCCCTCACAATGTTTAGACTTAAGATTTTTTGACTTTACGATGGTGTGGAAGTGATACACATTTGGTAGAAAC
CATACTTTGAATTTTGATCTTTGTCCACATGAGCAATAAGTGGCACAATACTTTTGTGATGTGGGGGAGCACCAATGACCACATCCCCCA
GTCAGAAACATAATCACAAGGGTAAACAGCTGATGCTGTACTCTGTAGTGTTGTGTGAGATACTCAGTGTTTTATTATAAGCTAGGCTTT
GTGTTAGATGATTTTCTTCAGCTGTAGGCTAACATAAGTGTTCTGAGCACATTTAAGGTAGGGAAGGCTAAGCTATGATGTAAGTTAGGT

>87568_87568_6_STK3-COX6C_STK3_chr8_99718694_ENST00000523601_COX6C_chr8_100899846_ENST00000523016_length(amino acids)=339AA_BP=302
MLETHILRTPSKSAESEIVEAIQCPFFRNLEKGWRDLSELDSSVEEMLQLMDSGITICLRNGAASVFKKKEWSTQGEENKQDSKLKKLSE
DSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQVPVESDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGS
VSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI

--------------------------------------------------------------
>87568_87568_7_STK3-COX6C_STK3_chr8_99718695_ENST00000419617_COX6C_chr8_100899846_ENST00000518171_length(transcript)=1345nt_BP=825nt
CCGCGGAGTTACGGGAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTGGTGCCCTAGGCTCGGCCGGCCGGTGCCCCGGCTCCTTTCC
TCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAG
CTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAA
GCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATA
ATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGC
GCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGA
CTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCA
GATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATT
CAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGAT
ATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAG
GAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGGGTCTCCCTCTGTCACCCAGGCCGTAGTGCTGTAGT
GCGATCATGGCTCACTGCAGCCTCAACCTCCCAGGCTCAAGGGATCTTCCTGCCTCAGCCTCCCAAGAAGCTGGCACTATAGGCATGTGC
CACCACACCTGGCTAACTTCTTTATTTTTAGTAGAGACAGGGTTTCACCATATTACCTGGGCTGTGCTTGAATTCCTGGGCTCAGGCGAT
CCGTCCACCTTGGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCACTGTGCCTGGCATAATTTTGGTATTTTTTGATAGTAGCCATCC

>87568_87568_7_STK3-COX6C_STK3_chr8_99718695_ENST00000419617_COX6C_chr8_100899846_ENST00000518171_length(amino acids)=297AA_BP=260
MWCPRLGRPVPRLLSSFRPSPSTRSLSLSPAAMEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQV
PVESDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIK
AGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITSIEMAEGKPPYADIHPMRFRVADQRKKA

--------------------------------------------------------------
>87568_87568_8_STK3-COX6C_STK3_chr8_99718695_ENST00000419617_COX6C_chr8_100899846_ENST00000520271_length(transcript)=1071nt_BP=825nt
CCGCGGAGTTACGGGAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTGGTGCCCTAGGCTCGGCCGGCCGGTGCCCCGGCTCCTTTCC
TCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAG
CTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAA
GCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATA
ATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGC
GCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGA
CTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCA
GATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATT
CAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGAT
ATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAG
GAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGAATTTCTTCAGGTTGAATTACCTAGAAGTTTGTCAC

>87568_87568_8_STK3-COX6C_STK3_chr8_99718695_ENST00000419617_COX6C_chr8_100899846_ENST00000520271_length(amino acids)=297AA_BP=260
MWCPRLGRPVPRLLSSFRPSPSTRSLSLSPAAMEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQV
PVESDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIK
AGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITSIEMAEGKPPYADIHPMRFRVADQRKKA

--------------------------------------------------------------
>87568_87568_9_STK3-COX6C_STK3_chr8_99718695_ENST00000419617_COX6C_chr8_100899846_ENST00000520468_length(transcript)=1354nt_BP=825nt
CCGCGGAGTTACGGGAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTGGTGCCCTAGGCTCGGCCGGCCGGTGCCCCGGCTCCTTTCC
TCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAG
CTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAA
GCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATA
ATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGC
GCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGA
CTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCA
GATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATT
CAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGAT
ATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAG
GAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGAATTTCTTCAGGTTGAATTACCTAGAAGTTTGTCAC
TGACTTGTGTTCCTGAACTATGACACATGAATATGTGGGCTAAGAAATAGTTCCTCTTGATAAATAAACAATTAACAAATACTTTGGACA
GTAAGTCTTTCTCAGTTCTTAATGATAATGCAGGGCACTTACTAGCATAAGAATTGGTTTGGGATTTAACTGTTTATGAAGCTAACTTGA
TTTCCGTGTTTTGTTAAAATTTCATTGTTCTAGCACATCTTTAACTGTGATAGTTTGTCCGTTTCATTGCAGTTACTTGGTCTTGGGCTA
TGGATTAAAAAGTGTTCTTCATGAGCCTGTAAGACTACTGTACTGTGGGCTCTAAGAAGAGATAGAATCCTAATAAAATCTATCCTTGGC

>87568_87568_9_STK3-COX6C_STK3_chr8_99718695_ENST00000419617_COX6C_chr8_100899846_ENST00000520468_length(amino acids)=297AA_BP=260
MWCPRLGRPVPRLLSSFRPSPSTRSLSLSPAAMEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQV
PVESDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIK
AGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITSIEMAEGKPPYADIHPMRFRVADQRKKA

--------------------------------------------------------------
>87568_87568_10_STK3-COX6C_STK3_chr8_99718695_ENST00000419617_COX6C_chr8_100899846_ENST00000522940_length(transcript)=1069nt_BP=825nt
CCGCGGAGTTACGGGAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTGGTGCCCTAGGCTCGGCCGGCCGGTGCCCCGGCTCCTTTCC
TCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAG
CTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAA
GCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATA
ATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGC
GCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGA
CTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCA
GATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATT
CAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGAT
ATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAG
GAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGAATTTCTTCAGGTTGAATTACCTAGAAGTTTGTCAC

>87568_87568_10_STK3-COX6C_STK3_chr8_99718695_ENST00000419617_COX6C_chr8_100899846_ENST00000522940_length(amino acids)=297AA_BP=260
MWCPRLGRPVPRLLSSFRPSPSTRSLSLSPAAMEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQV
PVESDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIK
AGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITSIEMAEGKPPYADIHPMRFRVADQRKKA

--------------------------------------------------------------
>87568_87568_11_STK3-COX6C_STK3_chr8_99718695_ENST00000419617_COX6C_chr8_100899846_ENST00000524245_length(transcript)=1070nt_BP=825nt
CCGCGGAGTTACGGGAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTGGTGCCCTAGGCTCGGCCGGCCGGTGCCCCGGCTCCTTTCC
TCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAG
CTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAA
GCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATA
ATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGC
GCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGA
CTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCA
GATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATT
CAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGAT
ATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAG
GAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGAATTTCTTCAGGTTGAATTACCTAGAAGTTTGTCAC

>87568_87568_11_STK3-COX6C_STK3_chr8_99718695_ENST00000419617_COX6C_chr8_100899846_ENST00000524245_length(amino acids)=297AA_BP=260
MWCPRLGRPVPRLLSSFRPSPSTRSLSLSPAAMEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQV
PVESDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIK
AGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITSIEMAEGKPPYADIHPMRFRVADQRKKA

--------------------------------------------------------------
>87568_87568_12_STK3-COX6C_STK3_chr8_99718695_ENST00000523601_COX6C_chr8_100899846_ENST00000523016_length(transcript)=1726nt_BP=1168nt
GTGCAGAACCGTTTGGTTTTCCCGAGGGGTAGGCAGAATTTCCAACCCCACGAGCTGCTCCCTCTTTCCGCAAACCTCCTAACCCCGGGG
TTTTTCCATAAATGTGTTTACTTCGTCCACGCCAGCCTGCGAAGTTCCAAAATGGAGTCTGGGCCACGCCGGCGTTCTGGGCACGACTAC
GGTCTCTTGAAAAGATTTGGAATTGACCATGTAGATAATCTCTGAGAGCAGTTCTTAAAGTGTAATCCAGAACCGGTGGAACTTGCTAGA
AACGCATATTCTTCGGACCCCCTCCAAATCTGCTGAATCTGAGATTGTGGAGGCCATTCAATGTCCCTTCTTCAGGAATTTGGAAAAAGG
ATGGAGAGATCTCTCTGAGCTAGACTCTTCAGTGGAGGAAATGTTACAACTCATGGACAGTGGCATTACCATCTGCCTTAGGAACGGAGC
AGCCTCTGTCTTCAAGAAAAAAGAATGGAGCACACAAGGAGAAGAAAACAAGCAAGACAGTAAACTAAAAAAGCTGAGTGAAGACAGTTT
GACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAAGCAATACACAAGGAATC
CGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATAATGCAGCAATGTGACAG
CCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGCGCTGGCTCTGTCTCAGA
CATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGACTAGAATATTTGCACTT
TATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCAGATTTTGGAGTGGCTGG
TCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATTCAAGAAATAGGCTATAA
CTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGATATACATCCAATGAGGTT
TCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAGGAGATGAGGAAGGCTGG
TATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGGTAATATGGTTATTTGAAGTTACTTAAAAAAAAATTTCTAATTGTGGTAAAAT
GCAAATACAGGTGACTGTCCCTCACAATGTTTAGACTTAAGATTTTTTGACTTTACGATGGTGTGGAAGTGATACACATTTGGTAGAAAC
CATACTTTGAATTTTGATCTTTGTCCACATGAGCAATAAGTGGCACAATACTTTTGTGATGTGGGGGAGCACCAATGACCACATCCCCCA
GTCAGAAACATAATCACAAGGGTAAACAGCTGATGCTGTACTCTGTAGTGTTGTGTGAGATACTCAGTGTTTTATTATAAGCTAGGCTTT
GTGTTAGATGATTTTCTTCAGCTGTAGGCTAACATAAGTGTTCTGAGCACATTTAAGGTAGGGAAGGCTAAGCTATGATGTAAGTTAGGT

>87568_87568_12_STK3-COX6C_STK3_chr8_99718695_ENST00000523601_COX6C_chr8_100899846_ENST00000523016_length(amino acids)=339AA_BP=302
MLETHILRTPSKSAESEIVEAIQCPFFRNLEKGWRDLSELDSSVEEMLQLMDSGITICLRNGAASVFKKKEWSTQGEENKQDSKLKKLSE
DSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQVPVESDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGS
VSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI

--------------------------------------------------------------

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Fusion Gene PPI Analysis for STK3-COX6C


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for STK3-COX6C


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for STK3-COX6C


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource