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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:SUPT5H-CATSPERG (FusionGDB2 ID:88150)

Fusion Gene Summary for SUPT5H-CATSPERG

check button Fusion gene summary
Fusion gene informationFusion gene name: SUPT5H-CATSPERG
Fusion gene ID: 88150
HgeneTgene
Gene symbol

SUPT5H

CATSPERG

Gene ID

6829

57828

Gene nameSPT5 homolog, DSIF elongation factor subunitcation channel sperm associated auxiliary subunit gamma
SynonymsSPT5|SPT5H|Tat-CT1C19orf15
Cytomap

19q13.2

19q13.2

Type of geneprotein-codingprotein-coding
Descriptiontranscription elongation factor SPT5DRB sensitivity-inducing factor 160 kDa subunitDRB sensitivity-inducing factor large subunitDSIF large subunitDSIF p160Tat-cotransactivator 1 proteinhSPT5suppressor of Ty 5 homologcation channel sperm-associated protein subunit gammacatsper channel auxiliary subunit gamma
Modification date2020031320200313
UniProtAcc.

Q6ZRH7

Ensembl transtripts involved in fusion geneENST00000359191, ENST00000402194, 
ENST00000432763, ENST00000598725, 
ENST00000599117, 		ENST00000215069, 
ENST00000467739, ENST00000409235, 
ENST00000410018, 
Fusion gene scores* DoF score17 X 13 X 9=19895 X 10 X 4=200
# samples 196
** MAII scorelog2(19/1989*10)=-3.3879719525028
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(6/200*10)=-1.73696559416621
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: SUPT5H [Title/Abstract] AND CATSPERG [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointSUPT5H(39936582)-CATSPERG(38855583), # samples:2
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneSUPT5H

GO:0000122

negative regulation of transcription by RNA polymerase II

9450929

HgeneSUPT5H

GO:0006368

transcription elongation from RNA polymerase II promoter

9450929

HgeneSUPT5H

GO:0032785

negative regulation of DNA-templated transcription, elongation

9450929

HgeneSUPT5H

GO:0032786

positive regulation of DNA-templated transcription, elongation

9450929

HgeneSUPT5H

GO:0045944

positive regulation of transcription by RNA polymerase II

9450929


check buttonFusion gene breakpoints across SUPT5H (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across CATSPERG (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4OVTCGA-29-1766-01ASUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+


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Fusion Gene ORF analysis for SUPT5H-CATSPERG

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-3UTRENST00000359191ENST00000215069SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
5CDS-3UTRENST00000402194ENST00000215069SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
5CDS-3UTRENST00000432763ENST00000215069SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
5CDS-3UTRENST00000598725ENST00000215069SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
5CDS-3UTRENST00000599117ENST00000215069SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
5CDS-intronENST00000359191ENST00000467739SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
5CDS-intronENST00000402194ENST00000467739SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
5CDS-intronENST00000432763ENST00000467739SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
5CDS-intronENST00000598725ENST00000467739SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
5CDS-intronENST00000599117ENST00000467739SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
In-frameENST00000359191ENST00000409235SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
In-frameENST00000359191ENST00000410018SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
In-frameENST00000402194ENST00000409235SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
In-frameENST00000402194ENST00000410018SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
In-frameENST00000432763ENST00000409235SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
In-frameENST00000432763ENST00000410018SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
In-frameENST00000598725ENST00000409235SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
In-frameENST00000598725ENST00000410018SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
In-frameENST00000599117ENST00000409235SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+
In-frameENST00000599117ENST00000410018SUPT5Hchr19

39936582

+CATSPERGchr19

38855583

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000599117SUPT5Hchr1939936582+ENST00000409235CATSPERGchr1938855583+14063031361254372
ENST00000599117SUPT5Hchr1939936582+ENST00000410018CATSPERGchr1938855583+14063031361254372
ENST00000432763SUPT5Hchr1939936582+ENST00000409235CATSPERGchr1938855583+12181151191066315
ENST00000432763SUPT5Hchr1939936582+ENST00000410018CATSPERGchr1938855583+12181151191066315
ENST00000402194SUPT5Hchr1939936582+ENST00000409235CATSPERGchr1938855583+12181151191066315
ENST00000402194SUPT5Hchr1939936582+ENST00000410018CATSPERGchr1938855583+12181151191066315
ENST00000359191SUPT5Hchr1939936582+ENST00000409235CATSPERGchr1938855583+11262327974315
ENST00000359191SUPT5Hchr1939936582+ENST00000410018CATSPERGchr1938855583+11262327974315
ENST00000598725SUPT5Hchr1939936582+ENST00000409235CATSPERGchr1938855583+11262327974315
ENST00000598725SUPT5Hchr1939936582+ENST00000410018CATSPERGchr1938855583+11262327974315

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000599117ENST00000409235SUPT5Hchr1939936582+CATSPERGchr1938855583+0.0054438740.9945562
ENST00000599117ENST00000410018SUPT5Hchr1939936582+CATSPERGchr1938855583+0.0054438740.9945562
ENST00000432763ENST00000409235SUPT5Hchr1939936582+CATSPERGchr1938855583+0.0071894230.99281055
ENST00000432763ENST00000410018SUPT5Hchr1939936582+CATSPERGchr1938855583+0.0071894230.99281055
ENST00000402194ENST00000409235SUPT5Hchr1939936582+CATSPERGchr1938855583+0.0071894230.99281055
ENST00000402194ENST00000410018SUPT5Hchr1939936582+CATSPERGchr1938855583+0.0071894230.99281055
ENST00000359191ENST00000409235SUPT5Hchr1939936582+CATSPERGchr1938855583+0.007402730.9925972
ENST00000359191ENST00000410018SUPT5Hchr1939936582+CATSPERGchr1938855583+0.007402730.9925972
ENST00000598725ENST00000409235SUPT5Hchr1939936582+CATSPERGchr1938855583+0.007402730.9925972
ENST00000598725ENST00000410018SUPT5Hchr1939936582+CATSPERGchr1938855583+0.007402730.9925972

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Fusion Genomic Features for SUPT5H-CATSPERG


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for SUPT5H-CATSPERG


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr19:39936582/chr19:38855583)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.CATSPERG

Q6ZRH7

FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Probably involved in sperm cell hyperactivation via its association with CATSPER1. Sperm cell hyperactivation is needed for sperm motility which is essential late in the preparation of sperm for fertilization. {ECO:0000250|UniProtKB:C6KI89}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneCATSPERGchr19:39936582chr19:38855583ENST000004092350291088_115901160.0Topological domainCytoplasmic
TgeneCATSPERGchr19:39936582chr19:38855583ENST0000040923502936_106601160.0Topological domainExtracellular
TgeneCATSPERGchr19:39936582chr19:38855583ENST000004092350291067_108701160.0TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+12811_10601084.0Compositional biasNote=Glu-rich
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128844_96801084.0Compositional biasNote=Pro-rich
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+12911_10601084.0Compositional biasNote=Glu-rich
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129844_96801084.0Compositional biasNote=Pro-rich
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+13011_10601088.0Compositional biasNote=Glu-rich
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130844_96801088.0Compositional biasNote=Pro-rich
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+12911_10601088.0Compositional biasNote=Glu-rich
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129844_96801088.0Compositional biasNote=Pro-rich
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+13111_10601088.0Compositional biasNote=Glu-rich
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131844_96801088.0Compositional biasNote=Pro-rich
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128273_30601084.0DomainNote=KOW 1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128420_45101084.0DomainNote=KOW 2
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128472_50301084.0DomainNote=KOW 3
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128594_62701084.0DomainNote=KOW 4
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128704_73701084.0DomainNote=KOW 5
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129273_30601084.0DomainNote=KOW 1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129420_45101084.0DomainNote=KOW 2
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129472_50301084.0DomainNote=KOW 3
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129594_62701084.0DomainNote=KOW 4
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129704_73701084.0DomainNote=KOW 5
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130273_30601088.0DomainNote=KOW 1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130420_45101088.0DomainNote=KOW 2
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130472_50301088.0DomainNote=KOW 3
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130594_62701088.0DomainNote=KOW 4
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130704_73701088.0DomainNote=KOW 5
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129273_30601088.0DomainNote=KOW 1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129420_45101088.0DomainNote=KOW 2
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129472_50301088.0DomainNote=KOW 3
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129594_62701088.0DomainNote=KOW 4
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129704_73701088.0DomainNote=KOW 5
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131273_30601088.0DomainNote=KOW 1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131420_45101088.0DomainNote=KOW 2
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131472_50301088.0DomainNote=KOW 3
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131594_62701088.0DomainNote=KOW 4
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131704_73701088.0DomainNote=KOW 5
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128754_81701084.0RegionNote=9 X 7 AA approximate tandem repeats of G-S-[QR]-T-P-X-[YQ]%2C motif CTR1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128844_95001084.0RegionNote=10 X 8 AA approximate tandem repeats of P-[TS]-P-S-P-[QA]-[SG]-Y%2C motif CTR2
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129754_81701084.0RegionNote=9 X 7 AA approximate tandem repeats of G-S-[QR]-T-P-X-[YQ]%2C motif CTR1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129844_95001084.0RegionNote=10 X 8 AA approximate tandem repeats of P-[TS]-P-S-P-[QA]-[SG]-Y%2C motif CTR2
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130754_81701088.0RegionNote=9 X 7 AA approximate tandem repeats of G-S-[QR]-T-P-X-[YQ]%2C motif CTR1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130844_95001088.0RegionNote=10 X 8 AA approximate tandem repeats of P-[TS]-P-S-P-[QA]-[SG]-Y%2C motif CTR2
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129754_81701088.0RegionNote=9 X 7 AA approximate tandem repeats of G-S-[QR]-T-P-X-[YQ]%2C motif CTR1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129844_95001088.0RegionNote=10 X 8 AA approximate tandem repeats of P-[TS]-P-S-P-[QA]-[SG]-Y%2C motif CTR2
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131754_81701088.0RegionNote=9 X 7 AA approximate tandem repeats of G-S-[QR]-T-P-X-[YQ]%2C motif CTR1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131844_95001088.0RegionNote=10 X 8 AA approximate tandem repeats of P-[TS]-P-S-P-[QA]-[SG]-Y%2C motif CTR2
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128754_75901084.0RepeatNote=CTR1-1%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128760_76501084.0RepeatNote=CTR1-2
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128766_77101084.0RepeatNote=CTR1-3
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128772_77801084.0RepeatNote=CTR1-4
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128781_78701084.0RepeatNote=CTR1-5
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128788_79401084.0RepeatNote=CTR1-6
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128796_80201084.0RepeatNote=CTR1-7
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128803_80901084.0RepeatNote=CTR1-8
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128811_81701084.0RepeatNote=CTR1-9
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128844_85101084.0RepeatNote=CTR2-1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128854_86201084.0RepeatNote=CTR2-2%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128863_86901084.0RepeatNote=CTR2-3%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128881_88501084.0RepeatNote=CTR2-4%3B half-length
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128896_90201084.0RepeatNote=CTR2-5%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128904_91101084.0RepeatNote=CTR2-6
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128916_92101084.0RepeatNote=CTR2-7%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128924_93001084.0RepeatNote=CTR2-8
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128932_93901084.0RepeatNote=CTR2-9
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128943_95001084.0RepeatNote=CTR2-10
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129754_75901084.0RepeatNote=CTR1-1%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129760_76501084.0RepeatNote=CTR1-2
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129766_77101084.0RepeatNote=CTR1-3
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129772_77801084.0RepeatNote=CTR1-4
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129781_78701084.0RepeatNote=CTR1-5
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129788_79401084.0RepeatNote=CTR1-6
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129796_80201084.0RepeatNote=CTR1-7
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129803_80901084.0RepeatNote=CTR1-8
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129811_81701084.0RepeatNote=CTR1-9
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129844_85101084.0RepeatNote=CTR2-1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129854_86201084.0RepeatNote=CTR2-2%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129863_86901084.0RepeatNote=CTR2-3%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129881_88501084.0RepeatNote=CTR2-4%3B half-length
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129896_90201084.0RepeatNote=CTR2-5%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129904_91101084.0RepeatNote=CTR2-6
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129916_92101084.0RepeatNote=CTR2-7%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129924_93001084.0RepeatNote=CTR2-8
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129932_93901084.0RepeatNote=CTR2-9
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129943_95001084.0RepeatNote=CTR2-10
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130754_75901088.0RepeatNote=CTR1-1%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130760_76501088.0RepeatNote=CTR1-2
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130766_77101088.0RepeatNote=CTR1-3
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130772_77801088.0RepeatNote=CTR1-4
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130781_78701088.0RepeatNote=CTR1-5
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130788_79401088.0RepeatNote=CTR1-6
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130796_80201088.0RepeatNote=CTR1-7
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130803_80901088.0RepeatNote=CTR1-8
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130811_81701088.0RepeatNote=CTR1-9
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130844_85101088.0RepeatNote=CTR2-1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130854_86201088.0RepeatNote=CTR2-2%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130863_86901088.0RepeatNote=CTR2-3%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130881_88501088.0RepeatNote=CTR2-4%3B half-length
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130896_90201088.0RepeatNote=CTR2-5%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130904_91101088.0RepeatNote=CTR2-6
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130916_92101088.0RepeatNote=CTR2-7%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130924_93001088.0RepeatNote=CTR2-8
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130932_93901088.0RepeatNote=CTR2-9
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130943_95001088.0RepeatNote=CTR2-10
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129754_75901088.0RepeatNote=CTR1-1%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129760_76501088.0RepeatNote=CTR1-2
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129766_77101088.0RepeatNote=CTR1-3
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129772_77801088.0RepeatNote=CTR1-4
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129781_78701088.0RepeatNote=CTR1-5
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129788_79401088.0RepeatNote=CTR1-6
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129796_80201088.0RepeatNote=CTR1-7
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129803_80901088.0RepeatNote=CTR1-8
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129811_81701088.0RepeatNote=CTR1-9
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129844_85101088.0RepeatNote=CTR2-1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129854_86201088.0RepeatNote=CTR2-2%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129863_86901088.0RepeatNote=CTR2-3%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129881_88501088.0RepeatNote=CTR2-4%3B half-length
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129896_90201088.0RepeatNote=CTR2-5%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129904_91101088.0RepeatNote=CTR2-6
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129916_92101088.0RepeatNote=CTR2-7%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129924_93001088.0RepeatNote=CTR2-8
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129932_93901088.0RepeatNote=CTR2-9
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129943_95001088.0RepeatNote=CTR2-10
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131754_75901088.0RepeatNote=CTR1-1%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131760_76501088.0RepeatNote=CTR1-2
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131766_77101088.0RepeatNote=CTR1-3
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131772_77801088.0RepeatNote=CTR1-4
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131781_78701088.0RepeatNote=CTR1-5
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131788_79401088.0RepeatNote=CTR1-6
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131796_80201088.0RepeatNote=CTR1-7
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131803_80901088.0RepeatNote=CTR1-8
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131811_81701088.0RepeatNote=CTR1-9
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131844_85101088.0RepeatNote=CTR2-1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131854_86201088.0RepeatNote=CTR2-2%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131863_86901088.0RepeatNote=CTR2-3%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131881_88501088.0RepeatNote=CTR2-4%3B half-length
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131896_90201088.0RepeatNote=CTR2-5%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131904_91101088.0RepeatNote=CTR2-6
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131916_92101088.0RepeatNote=CTR2-7%3B approximate
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131924_93001088.0RepeatNote=CTR2-8
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131932_93901088.0RepeatNote=CTR2-9
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131943_95001088.0RepeatNote=CTR2-10


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Fusion Gene Sequence for SUPT5H-CATSPERG


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>88150_88150_1_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000359191_CATSPERG_chr19_38855583_ENST00000409235_length(transcript)=1126nt_BP=23nt
GCAGTGACGGCGAGGAGGCCGAGCCTTATGGAGACTTCCATGACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTCCAGGAAACACAC
CTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCCTTCGACATCACCTACACG
CTGGAATACAGCCGCCTGAAGAACAAACACTACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTTTC
TACCCCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCAGCTATGTTCTGCTGGTGGTGGGTGGCGGGCCC
ACACTGGACAGCCTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAGACCAACAGCCTTATCTGGACCACG
AGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCA
TGCTATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGAGGAGTGGACACGAGCACCTAC
TGCAACTACCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCCTTTTCATCATCATGGTGTCAGCTAGC
GTGTTTGTGGGCCTGGTGATCTTCTACATCGCCTTCTGCCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATA
AACAACCTCATTGCCTCAGAATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTCCAGGATGGGC
TCCATGTTCAGCTCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTGATGACCTGAGTGTCCCACCTGCCC
CAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTTTCTGTTTTGCT

>88150_88150_1_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000359191_CATSPERG_chr19_38855583_ENST00000409235_length(amino acids)=315AA_BP=0
METSMTVNVVGSSGLCFQETHLGPHMQGNLMVPVFIGCPPGKRLAFDITYTLEYSRLKNKHYFDCVNVNPEMPCFLFRDIFYPFFLIQDL
VTGDSGSFQGSYVLLVVGGGPTLDSLKDYSEDEIYRFNSPLDKTNSLIWTTRTTRTTKDSAFHIMSHESPGIEWLCLENAPCYDNVPQGI
FAPEFFFKVLVSNRGVDTSTYCNYQLTFLLHIHGLPLSPKRALFIIMVSASVFVGLVIFYIAFCLLWPLVVKGCTMIRWKINNLIASESY

--------------------------------------------------------------
>88150_88150_2_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000359191_CATSPERG_chr19_38855583_ENST00000410018_length(transcript)=1126nt_BP=23nt
GCAGTGACGGCGAGGAGGCCGAGCCTTATGGAGACTTCCATGACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTCCAGGAAACACAC
CTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCCTTCGACATCACCTACACG
CTGGAATACAGCCGCCTGAAGAACAAACACTACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTTTC
TACCCCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCAGCTATGTTCTGCTGGTGGTGGGTGGCGGGCCC
ACACTGGACAGCCTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAGACCAACAGCCTTATCTGGACCACG
AGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCA
TGCTATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGAGGAGTGGACACGAGCACCTAC
TGCAACTACCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCCTTTTCATCATCATGGTGTCAGCTAGC
GTGTTTGTGGGCCTGGTGATCTTCTACATCGCCTTCTGCCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATA
AACAACCTCATTGCCTCAGAATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTCCAGGATGGGC
TCCATGTTCAGCTCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTGATGACCTGAGTGTCCCACCTGCCC
CAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTTTCTGTTTTGCT

>88150_88150_2_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000359191_CATSPERG_chr19_38855583_ENST00000410018_length(amino acids)=315AA_BP=0
METSMTVNVVGSSGLCFQETHLGPHMQGNLMVPVFIGCPPGKRLAFDITYTLEYSRLKNKHYFDCVNVNPEMPCFLFRDIFYPFFLIQDL
VTGDSGSFQGSYVLLVVGGGPTLDSLKDYSEDEIYRFNSPLDKTNSLIWTTRTTRTTKDSAFHIMSHESPGIEWLCLENAPCYDNVPQGI
FAPEFFFKVLVSNRGVDTSTYCNYQLTFLLHIHGLPLSPKRALFIIMVSASVFVGLVIFYIAFCLLWPLVVKGCTMIRWKINNLIASESY

--------------------------------------------------------------
>88150_88150_3_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000402194_CATSPERG_chr19_38855583_ENST00000409235_length(transcript)=1218nt_BP=115nt
AACGGGTAGGTTCTCGCGAGAGGACCCGTCAGCCCCAGTCAGGCGTCGTGCGAACAGCAGCTGGTACCGAAGGCGGAGGTGGAGCCCGAG
AGGCAGTGACGGCGAGGAGGCCGAGCCTTATGGAGACTTCCATGACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTCCAGGAAACAC
ACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCCTTCGACATCACCTACA
CGCTGGAATACAGCCGCCTGAAGAACAAACACTACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTT
TCTACCCCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCAGCTATGTTCTGCTGGTGGTGGGTGGCGGGC
CCACACTGGACAGCCTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAGACCAACAGCCTTATCTGGACCA
CGAGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCC
CATGCTATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGAGGAGTGGACACGAGCACCT
ACTGCAACTACCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCCTTTTCATCATCATGGTGTCAGCTA
GCGTGTTTGTGGGCCTGGTGATCTTCTACATCGCCTTCTGCCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGA
TAAACAACCTCATTGCCTCAGAATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTCCAGGATGG
GCTCCATGTTCAGCTCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTGATGACCTGAGTGTCCCACCTGC
CCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTTTCTGTTTTG

>88150_88150_3_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000402194_CATSPERG_chr19_38855583_ENST00000409235_length(amino acids)=315AA_BP=0
METSMTVNVVGSSGLCFQETHLGPHMQGNLMVPVFIGCPPGKRLAFDITYTLEYSRLKNKHYFDCVNVNPEMPCFLFRDIFYPFFLIQDL
VTGDSGSFQGSYVLLVVGGGPTLDSLKDYSEDEIYRFNSPLDKTNSLIWTTRTTRTTKDSAFHIMSHESPGIEWLCLENAPCYDNVPQGI
FAPEFFFKVLVSNRGVDTSTYCNYQLTFLLHIHGLPLSPKRALFIIMVSASVFVGLVIFYIAFCLLWPLVVKGCTMIRWKINNLIASESY

--------------------------------------------------------------
>88150_88150_4_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000402194_CATSPERG_chr19_38855583_ENST00000410018_length(transcript)=1218nt_BP=115nt
AACGGGTAGGTTCTCGCGAGAGGACCCGTCAGCCCCAGTCAGGCGTCGTGCGAACAGCAGCTGGTACCGAAGGCGGAGGTGGAGCCCGAG
AGGCAGTGACGGCGAGGAGGCCGAGCCTTATGGAGACTTCCATGACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTCCAGGAAACAC
ACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCCTTCGACATCACCTACA
CGCTGGAATACAGCCGCCTGAAGAACAAACACTACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTT
TCTACCCCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCAGCTATGTTCTGCTGGTGGTGGGTGGCGGGC
CCACACTGGACAGCCTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAGACCAACAGCCTTATCTGGACCA
CGAGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCC
CATGCTATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGAGGAGTGGACACGAGCACCT
ACTGCAACTACCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCCTTTTCATCATCATGGTGTCAGCTA
GCGTGTTTGTGGGCCTGGTGATCTTCTACATCGCCTTCTGCCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGA
TAAACAACCTCATTGCCTCAGAATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTCCAGGATGG
GCTCCATGTTCAGCTCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTGATGACCTGAGTGTCCCACCTGC
CCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTTTCTGTTTTG

>88150_88150_4_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000402194_CATSPERG_chr19_38855583_ENST00000410018_length(amino acids)=315AA_BP=0
METSMTVNVVGSSGLCFQETHLGPHMQGNLMVPVFIGCPPGKRLAFDITYTLEYSRLKNKHYFDCVNVNPEMPCFLFRDIFYPFFLIQDL
VTGDSGSFQGSYVLLVVGGGPTLDSLKDYSEDEIYRFNSPLDKTNSLIWTTRTTRTTKDSAFHIMSHESPGIEWLCLENAPCYDNVPQGI
FAPEFFFKVLVSNRGVDTSTYCNYQLTFLLHIHGLPLSPKRALFIIMVSASVFVGLVIFYIAFCLLWPLVVKGCTMIRWKINNLIASESY

--------------------------------------------------------------
>88150_88150_5_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000432763_CATSPERG_chr19_38855583_ENST00000409235_length(transcript)=1218nt_BP=115nt
AACGGGTAGGTTCTCGCGAGAGGACCCGTCAGCCCCAGTCAGGCGTCGTGCGAACAGCAGCTGGTACCGAAGGCGGAGGTGGAGCCCGAG
AGGCAGTGACGGCGAGGAGGCCGAGCCTTATGGAGACTTCCATGACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTCCAGGAAACAC
ACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCCTTCGACATCACCTACA
CGCTGGAATACAGCCGCCTGAAGAACAAACACTACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTT
TCTACCCCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCAGCTATGTTCTGCTGGTGGTGGGTGGCGGGC
CCACACTGGACAGCCTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAGACCAACAGCCTTATCTGGACCA
CGAGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCC
CATGCTATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGAGGAGTGGACACGAGCACCT
ACTGCAACTACCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCCTTTTCATCATCATGGTGTCAGCTA
GCGTGTTTGTGGGCCTGGTGATCTTCTACATCGCCTTCTGCCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGA
TAAACAACCTCATTGCCTCAGAATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTCCAGGATGG
GCTCCATGTTCAGCTCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTGATGACCTGAGTGTCCCACCTGC
CCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTTTCTGTTTTG

>88150_88150_5_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000432763_CATSPERG_chr19_38855583_ENST00000409235_length(amino acids)=315AA_BP=0
METSMTVNVVGSSGLCFQETHLGPHMQGNLMVPVFIGCPPGKRLAFDITYTLEYSRLKNKHYFDCVNVNPEMPCFLFRDIFYPFFLIQDL
VTGDSGSFQGSYVLLVVGGGPTLDSLKDYSEDEIYRFNSPLDKTNSLIWTTRTTRTTKDSAFHIMSHESPGIEWLCLENAPCYDNVPQGI
FAPEFFFKVLVSNRGVDTSTYCNYQLTFLLHIHGLPLSPKRALFIIMVSASVFVGLVIFYIAFCLLWPLVVKGCTMIRWKINNLIASESY

--------------------------------------------------------------
>88150_88150_6_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000432763_CATSPERG_chr19_38855583_ENST00000410018_length(transcript)=1218nt_BP=115nt
AACGGGTAGGTTCTCGCGAGAGGACCCGTCAGCCCCAGTCAGGCGTCGTGCGAACAGCAGCTGGTACCGAAGGCGGAGGTGGAGCCCGAG
AGGCAGTGACGGCGAGGAGGCCGAGCCTTATGGAGACTTCCATGACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTCCAGGAAACAC
ACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCCTTCGACATCACCTACA
CGCTGGAATACAGCCGCCTGAAGAACAAACACTACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTT
TCTACCCCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCAGCTATGTTCTGCTGGTGGTGGGTGGCGGGC
CCACACTGGACAGCCTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAGACCAACAGCCTTATCTGGACCA
CGAGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCC
CATGCTATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGAGGAGTGGACACGAGCACCT
ACTGCAACTACCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCCTTTTCATCATCATGGTGTCAGCTA
GCGTGTTTGTGGGCCTGGTGATCTTCTACATCGCCTTCTGCCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGA
TAAACAACCTCATTGCCTCAGAATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTCCAGGATGG
GCTCCATGTTCAGCTCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTGATGACCTGAGTGTCCCACCTGC
CCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTTTCTGTTTTG

>88150_88150_6_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000432763_CATSPERG_chr19_38855583_ENST00000410018_length(amino acids)=315AA_BP=0
METSMTVNVVGSSGLCFQETHLGPHMQGNLMVPVFIGCPPGKRLAFDITYTLEYSRLKNKHYFDCVNVNPEMPCFLFRDIFYPFFLIQDL
VTGDSGSFQGSYVLLVVGGGPTLDSLKDYSEDEIYRFNSPLDKTNSLIWTTRTTRTTKDSAFHIMSHESPGIEWLCLENAPCYDNVPQGI
FAPEFFFKVLVSNRGVDTSTYCNYQLTFLLHIHGLPLSPKRALFIIMVSASVFVGLVIFYIAFCLLWPLVVKGCTMIRWKINNLIASESY

--------------------------------------------------------------
>88150_88150_7_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000598725_CATSPERG_chr19_38855583_ENST00000409235_length(transcript)=1126nt_BP=23nt
GCAGTGACGGCGAGGAGGCCGAGCCTTATGGAGACTTCCATGACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTCCAGGAAACACAC
CTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCCTTCGACATCACCTACACG
CTGGAATACAGCCGCCTGAAGAACAAACACTACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTTTC
TACCCCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCAGCTATGTTCTGCTGGTGGTGGGTGGCGGGCCC
ACACTGGACAGCCTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAGACCAACAGCCTTATCTGGACCACG
AGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCA
TGCTATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGAGGAGTGGACACGAGCACCTAC
TGCAACTACCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCCTTTTCATCATCATGGTGTCAGCTAGC
GTGTTTGTGGGCCTGGTGATCTTCTACATCGCCTTCTGCCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATA
AACAACCTCATTGCCTCAGAATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTCCAGGATGGGC
TCCATGTTCAGCTCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTGATGACCTGAGTGTCCCACCTGCCC
CAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTTTCTGTTTTGCT

>88150_88150_7_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000598725_CATSPERG_chr19_38855583_ENST00000409235_length(amino acids)=315AA_BP=0
METSMTVNVVGSSGLCFQETHLGPHMQGNLMVPVFIGCPPGKRLAFDITYTLEYSRLKNKHYFDCVNVNPEMPCFLFRDIFYPFFLIQDL
VTGDSGSFQGSYVLLVVGGGPTLDSLKDYSEDEIYRFNSPLDKTNSLIWTTRTTRTTKDSAFHIMSHESPGIEWLCLENAPCYDNVPQGI
FAPEFFFKVLVSNRGVDTSTYCNYQLTFLLHIHGLPLSPKRALFIIMVSASVFVGLVIFYIAFCLLWPLVVKGCTMIRWKINNLIASESY

--------------------------------------------------------------
>88150_88150_8_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000598725_CATSPERG_chr19_38855583_ENST00000410018_length(transcript)=1126nt_BP=23nt
GCAGTGACGGCGAGGAGGCCGAGCCTTATGGAGACTTCCATGACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTCCAGGAAACACAC
CTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCCTTCGACATCACCTACACG
CTGGAATACAGCCGCCTGAAGAACAAACACTACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTTTC
TACCCCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCAGCTATGTTCTGCTGGTGGTGGGTGGCGGGCCC
ACACTGGACAGCCTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAGACCAACAGCCTTATCTGGACCACG
AGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCA
TGCTATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGAGGAGTGGACACGAGCACCTAC
TGCAACTACCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCCTTTTCATCATCATGGTGTCAGCTAGC
GTGTTTGTGGGCCTGGTGATCTTCTACATCGCCTTCTGCCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATA
AACAACCTCATTGCCTCAGAATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTCCAGGATGGGC
TCCATGTTCAGCTCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTGATGACCTGAGTGTCCCACCTGCCC
CAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTTTCTGTTTTGCT

>88150_88150_8_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000598725_CATSPERG_chr19_38855583_ENST00000410018_length(amino acids)=315AA_BP=0
METSMTVNVVGSSGLCFQETHLGPHMQGNLMVPVFIGCPPGKRLAFDITYTLEYSRLKNKHYFDCVNVNPEMPCFLFRDIFYPFFLIQDL
VTGDSGSFQGSYVLLVVGGGPTLDSLKDYSEDEIYRFNSPLDKTNSLIWTTRTTRTTKDSAFHIMSHESPGIEWLCLENAPCYDNVPQGI
FAPEFFFKVLVSNRGVDTSTYCNYQLTFLLHIHGLPLSPKRALFIIMVSASVFVGLVIFYIAFCLLWPLVVKGCTMIRWKINNLIASESY

--------------------------------------------------------------
>88150_88150_9_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000599117_CATSPERG_chr19_38855583_ENST00000409235_length(transcript)=1406nt_BP=303nt
AAGCCTTTTCTTCCCTCTAGGCCAGAGGACCCCACCTGGAGCCCTAGTAGCCAAGGGGAAGAGTTAAGAAGGAGGAAAGTAAGATGTCGG
CCCCGCACTCCGCCCAGGCCAGCCCTGCCTCTCTCAAGATGGCGACCTGGAAGTGCGTCGCCCGTGCCAGCCCCGGAAATCTCGTGTTAG
GCGAGGTCAACGGGTAGGTTCTCGCGAGAGGACCCGTCAGCCCCAGTCAGGCGTCGTGCGAACAGCAGCTGGTACCGAAGGCGGAGGTGG
AGCCCGAGAGGCAGTGACGGCGAGGAGGCCGAGCCTTATGGAGACTTCCATGACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTCCA
GGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCCTTCGACAT
CACCTACACGCTGGAATACAGCCGCCTGAAGAACAAACACTACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCG
GGACATTTTCTACCCCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCAGCTATGTTCTGCTGGTGGTGGG
TGGCGGGCCCACACTGGACAGCCTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAGACCAACAGCCTTAT
CTGGACCACGAGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTCTGTCTGGA
GAATGCCCCATGCTATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGAGGAGTGGACAC
GAGCACCTACTGCAACTACCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCCTTTTCATCATCATGGT
GTCAGCTAGCGTGTTTGTGGGCCTGGTGATCTTCTACATCGCCTTCTGCCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCG
GTGGAAGATAAACAACCTCATTGCCTCAGAATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTC
CAGGATGGGCTCCATGTTCAGCTCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTGATGACCTGAGTGTC
CCACCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTTT

>88150_88150_9_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000599117_CATSPERG_chr19_38855583_ENST00000409235_length(amino acids)=372AA_BP=56
MEVRRPCQPRKSRVRRGQRVGSRERTRQPQSGVVRTAAGTEGGGGAREAVTARRPSLMETSMTVNVVGSSGLCFQETHLGPHMQGNLMVP
VFIGCPPGKRLAFDITYTLEYSRLKNKHYFDCVNVNPEMPCFLFRDIFYPFFLIQDLVTGDSGSFQGSYVLLVVGGGPTLDSLKDYSEDE
IYRFNSPLDKTNSLIWTTRTTRTTKDSAFHIMSHESPGIEWLCLENAPCYDNVPQGIFAPEFFFKVLVSNRGVDTSTYCNYQLTFLLHIH
GLPLSPKRALFIIMVSASVFVGLVIFYIAFCLLWPLVVKGCTMIRWKINNLIASESYYTYASISGISSMPSLRHSRMGSMFSSRMTEDRA

--------------------------------------------------------------
>88150_88150_10_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000599117_CATSPERG_chr19_38855583_ENST00000410018_length(transcript)=1406nt_BP=303nt
AAGCCTTTTCTTCCCTCTAGGCCAGAGGACCCCACCTGGAGCCCTAGTAGCCAAGGGGAAGAGTTAAGAAGGAGGAAAGTAAGATGTCGG
CCCCGCACTCCGCCCAGGCCAGCCCTGCCTCTCTCAAGATGGCGACCTGGAAGTGCGTCGCCCGTGCCAGCCCCGGAAATCTCGTGTTAG
GCGAGGTCAACGGGTAGGTTCTCGCGAGAGGACCCGTCAGCCCCAGTCAGGCGTCGTGCGAACAGCAGCTGGTACCGAAGGCGGAGGTGG
AGCCCGAGAGGCAGTGACGGCGAGGAGGCCGAGCCTTATGGAGACTTCCATGACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTCCA
GGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGCCCCCCAGGCAAGCGCCTGGCCTTCGACAT
CACCTACACGCTGGAATACAGCCGCCTGAAGAACAAACACTACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCG
GGACATTTTCTACCCCTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCAGCTATGTTCTGCTGGTGGTGGG
TGGCGGGCCCACACTGGACAGCCTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAGACCAACAGCCTTAT
CTGGACCACGAGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTCTGTCTGGA
GAATGCCCCATGCTATGACAATGTTCCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGAGGAGTGGACAC
GAGCACCTACTGCAACTACCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCCTTTTCATCATCATGGT
GTCAGCTAGCGTGTTTGTGGGCCTGGTGATCTTCTACATCGCCTTCTGCCTCCTGTGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCG
GTGGAAGATAAACAACCTCATTGCCTCAGAATCCTACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTC
CAGGATGGGCTCCATGTTCAGCTCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTGATGACCTGAGTGTC
CCACCTGCCCCAGCCCCCAGTTACTGTCACGCCTCTCTTATGAGGCCCATCTTGAAGATGCAACCTGTCACCCAGCCCAGGCCTCTCTTT

>88150_88150_10_SUPT5H-CATSPERG_SUPT5H_chr19_39936582_ENST00000599117_CATSPERG_chr19_38855583_ENST00000410018_length(amino acids)=372AA_BP=56
MEVRRPCQPRKSRVRRGQRVGSRERTRQPQSGVVRTAAGTEGGGGAREAVTARRPSLMETSMTVNVVGSSGLCFQETHLGPHMQGNLMVP
VFIGCPPGKRLAFDITYTLEYSRLKNKHYFDCVNVNPEMPCFLFRDIFYPFFLIQDLVTGDSGSFQGSYVLLVVGGGPTLDSLKDYSEDE
IYRFNSPLDKTNSLIWTTRTTRTTKDSAFHIMSHESPGIEWLCLENAPCYDNVPQGIFAPEFFFKVLVSNRGVDTSTYCNYQLTFLLHIH
GLPLSPKRALFIIMVSASVFVGLVIFYIAFCLLWPLVVKGCTMIRWKINNLIASESYYTYASISGISSMPSLRHSRMGSMFSSRMTEDRA

--------------------------------------------------------------

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Fusion Gene PPI Analysis for SUPT5H-CATSPERG


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128313_42001084.0RNA polymerase II
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129313_42001084.0RNA polymerase II
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130313_42001088.0RNA polymerase II
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129313_42001088.0RNA polymerase II
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131313_42001088.0RNA polymerase II
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000359191+128176_27001084.0SUPT4H1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000402194+129176_27001084.0SUPT4H1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000432763+130176_27001088.0SUPT4H1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000598725+129176_27001088.0SUPT4H1
HgeneSUPT5Hchr19:39936582chr19:38855583ENST00000599117+131176_27001088.0SUPT4H1


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for SUPT5H-CATSPERG


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for SUPT5H-CATSPERG


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource