|
Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:TCF12-NIPA1 (FusionGDB2 ID:89714) |
Fusion Gene Summary for TCF12-NIPA1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: TCF12-NIPA1 | Fusion gene ID: 89714 | Hgene | Tgene | Gene symbol | TCF12 | NIPA1 | Gene ID | 6938 | 123606 |
Gene name | transcription factor 12 | NIPA magnesium transporter 1 | |
Synonyms | CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 | FSP3|SLC57A1|SPG6 | |
Cytomap | 15q21.3 | 15q11.2 | |
Type of gene | protein-coding | protein-coding | |
Description | transcription factor 12DNA-binding protein HTF4E-box-binding proteinclass B basic helix-loop-helix protein 20helix-loop-helix transcription factor 4transcription factor HTF-4 | magnesium transporter NIPA1non imprinted in Prader-Willi/Angelman syndrome 1non-imprinted in Prader-Willi/Angelman syndrome region protein 1spastic paraplegia 6 protein | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | Q7RTP0 | |
Ensembl transtripts involved in fusion gene | ENST00000267811, ENST00000333725, ENST00000438423, ENST00000452095, ENST00000557843, ENST00000343827, ENST00000537840, ENST00000543579, ENST00000559703, ENST00000559710, ENST00000560764, | ENST00000437912, ENST00000538684, ENST00000561183, ENST00000337435, | |
Fusion gene scores | * DoF score | 29 X 19 X 12=6612 | 1 X 1 X 1=1 |
# samples | 32 | 1 | |
** MAII score | log2(32/6612*10)=-4.36894291440495 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(1/1*10)=3.32192809488736 | |
Context | PubMed: TCF12 [Title/Abstract] AND NIPA1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | TCF12(57213296)-NIPA1(23062319), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | TCF12 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 11802795 |
Fusion gene breakpoints across TCF12 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across NIPA1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUAD | TCGA-75-7031-01A | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | - |
ChimerDB4 | LUAD | TCGA-75-7031-01A | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
Top |
Fusion Gene ORF analysis for TCF12-NIPA1 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000267811 | ENST00000437912 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
5CDS-5UTR | ENST00000267811 | ENST00000538684 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
5CDS-5UTR | ENST00000267811 | ENST00000561183 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
5CDS-5UTR | ENST00000333725 | ENST00000437912 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
5CDS-5UTR | ENST00000333725 | ENST00000538684 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
5CDS-5UTR | ENST00000333725 | ENST00000561183 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
5CDS-5UTR | ENST00000438423 | ENST00000437912 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
5CDS-5UTR | ENST00000438423 | ENST00000538684 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
5CDS-5UTR | ENST00000438423 | ENST00000561183 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
5CDS-5UTR | ENST00000452095 | ENST00000437912 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
5CDS-5UTR | ENST00000452095 | ENST00000538684 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
5CDS-5UTR | ENST00000452095 | ENST00000561183 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
5CDS-5UTR | ENST00000557843 | ENST00000437912 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
5CDS-5UTR | ENST00000557843 | ENST00000538684 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
5CDS-5UTR | ENST00000557843 | ENST00000561183 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
In-frame | ENST00000267811 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
In-frame | ENST00000333725 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
In-frame | ENST00000438423 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
In-frame | ENST00000452095 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
In-frame | ENST00000557843 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-3CDS | ENST00000343827 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-3CDS | ENST00000537840 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-3CDS | ENST00000543579 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-3CDS | ENST00000559703 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-3CDS | ENST00000559710 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-3CDS | ENST00000560764 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000343827 | ENST00000437912 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000343827 | ENST00000538684 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000343827 | ENST00000561183 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000537840 | ENST00000437912 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000537840 | ENST00000538684 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000537840 | ENST00000561183 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000543579 | ENST00000437912 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000543579 | ENST00000538684 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000543579 | ENST00000561183 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000559703 | ENST00000437912 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000559703 | ENST00000538684 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000559703 | ENST00000561183 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000559710 | ENST00000437912 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000559710 | ENST00000538684 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000559710 | ENST00000561183 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000560764 | ENST00000437912 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000560764 | ENST00000538684 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
intron-5UTR | ENST00000560764 | ENST00000561183 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000438423 | TCF12 | chr15 | 57213296 | + | ENST00000337435 | NIPA1 | chr15 | 23062319 | + | 6808 | 444 | 260 | 1255 | 331 |
ENST00000267811 | TCF12 | chr15 | 57213296 | + | ENST00000337435 | NIPA1 | chr15 | 23062319 | + | 6816 | 452 | 304 | 1263 | 319 |
ENST00000452095 | TCF12 | chr15 | 57213296 | + | ENST00000337435 | NIPA1 | chr15 | 23062319 | + | 6806 | 442 | 294 | 1253 | 319 |
ENST00000333725 | TCF12 | chr15 | 57213296 | + | ENST00000337435 | NIPA1 | chr15 | 23062319 | + | 6747 | 383 | 235 | 1194 | 319 |
ENST00000557843 | TCF12 | chr15 | 57213296 | + | ENST00000337435 | NIPA1 | chr15 | 23062319 | + | 6599 | 235 | 51 | 1046 | 331 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000438423 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + | 0.000339457 | 0.9996605 |
ENST00000267811 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + | 0.000340019 | 0.99966 |
ENST00000452095 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + | 0.000338974 | 0.9996611 |
ENST00000333725 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + | 0.000328602 | 0.99967146 |
ENST00000557843 | ENST00000337435 | TCF12 | chr15 | 57213296 | + | NIPA1 | chr15 | 23062319 | + | 0.000305726 | 0.99969435 |
Top |
Fusion Genomic Features for TCF12-NIPA1 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for TCF12-NIPA1 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr15:57213296/chr15:23062319) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | NIPA1 |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000267811 | + | 3 | 20 | 19_27 | 49 | 1821.3333333333333 | Motif | Note=9aaTAD |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000333725 | + | 3 | 21 | 19_27 | 49 | 1420.0 | Motif | Note=9aaTAD |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000438423 | + | 3 | 21 | 19_27 | 49 | 1398.3333333333333 | Motif | Note=9aaTAD |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000557843 | + | 3 | 20 | 19_27 | 49 | 1301.0 | Motif | Note=9aaTAD |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 110_117 | 59 | 330.0 | Topological domain | Cytoplasmic | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 139_159 | 59 | 330.0 | Topological domain | Extracellular | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 181_183 | 59 | 330.0 | Topological domain | Cytoplasmic | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 205_224 | 59 | 330.0 | Topological domain | Extracellular | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 246_259 | 59 | 330.0 | Topological domain | Cytoplasmic | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 281_290 | 59 | 330.0 | Topological domain | Extracellular | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 312_329 | 59 | 330.0 | Topological domain | Cytoplasmic | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 88_88 | 59 | 330.0 | Topological domain | Extracellular | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 110_117 | 0 | 255.0 | Topological domain | Cytoplasmic | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 139_159 | 0 | 255.0 | Topological domain | Extracellular | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 181_183 | 0 | 255.0 | Topological domain | Cytoplasmic | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 1_27 | 0 | 255.0 | Topological domain | Extracellular | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 205_224 | 0 | 255.0 | Topological domain | Extracellular | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 246_259 | 0 | 255.0 | Topological domain | Cytoplasmic | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 281_290 | 0 | 255.0 | Topological domain | Extracellular | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 312_329 | 0 | 255.0 | Topological domain | Cytoplasmic | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 49_66 | 0 | 255.0 | Topological domain | Cytoplasmic | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 88_88 | 0 | 255.0 | Topological domain | Extracellular | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 110_117 | 0 | 255.0 | Topological domain | Cytoplasmic | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 139_159 | 0 | 255.0 | Topological domain | Extracellular | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 181_183 | 0 | 255.0 | Topological domain | Cytoplasmic | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 1_27 | 0 | 255.0 | Topological domain | Extracellular | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 205_224 | 0 | 255.0 | Topological domain | Extracellular | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 246_259 | 0 | 255.0 | Topological domain | Cytoplasmic | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 281_290 | 0 | 255.0 | Topological domain | Extracellular | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 312_329 | 0 | 255.0 | Topological domain | Cytoplasmic | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 49_66 | 0 | 255.0 | Topological domain | Cytoplasmic | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 88_88 | 0 | 255.0 | Topological domain | Extracellular | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 118_138 | 59 | 330.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 160_180 | 59 | 330.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 184_204 | 59 | 330.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 225_245 | 59 | 330.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 260_280 | 59 | 330.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 291_311 | 59 | 330.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 67_87 | 59 | 330.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 89_109 | 59 | 330.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 118_138 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 160_180 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 184_204 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 225_245 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 260_280 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 28_48 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 291_311 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 67_87 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000437912 | 0 | 5 | 89_109 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 118_138 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 160_180 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 184_204 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 225_245 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 260_280 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 28_48 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 291_311 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 67_87 | 0 | 255.0 | Transmembrane | Helical | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000561183 | 0 | 5 | 89_109 | 0 | 255.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000267811 | + | 3 | 20 | 577_630 | 49 | 1821.3333333333333 | Domain | bHLH |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000333725 | + | 3 | 21 | 577_630 | 49 | 1420.0 | Domain | bHLH |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000343827 | + | 1 | 13 | 577_630 | 0 | 1254.6666666666667 | Domain | bHLH |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000438423 | + | 3 | 21 | 577_630 | 49 | 1398.3333333333333 | Domain | bHLH |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000557843 | + | 3 | 20 | 577_630 | 49 | 1301.0 | Domain | bHLH |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000343827 | + | 1 | 13 | 19_27 | 0 | 1254.6666666666667 | Motif | Note=9aaTAD |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000267811 | + | 3 | 20 | 119_140 | 49 | 1821.3333333333333 | Region | Note=Leucine-zipper |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000267811 | + | 3 | 20 | 632_655 | 49 | 1821.3333333333333 | Region | Note=Class A specific domain |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000333725 | + | 3 | 21 | 119_140 | 49 | 1420.0 | Region | Note=Leucine-zipper |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000333725 | + | 3 | 21 | 632_655 | 49 | 1420.0 | Region | Note=Class A specific domain |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000343827 | + | 1 | 13 | 119_140 | 0 | 1254.6666666666667 | Region | Note=Leucine-zipper |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000343827 | + | 1 | 13 | 632_655 | 0 | 1254.6666666666667 | Region | Note=Class A specific domain |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000438423 | + | 3 | 21 | 119_140 | 49 | 1398.3333333333333 | Region | Note=Leucine-zipper |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000438423 | + | 3 | 21 | 632_655 | 49 | 1398.3333333333333 | Region | Note=Class A specific domain |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000557843 | + | 3 | 20 | 119_140 | 49 | 1301.0 | Region | Note=Leucine-zipper |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000557843 | + | 3 | 20 | 632_655 | 49 | 1301.0 | Region | Note=Class A specific domain |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 1_27 | 59 | 330.0 | Topological domain | Extracellular | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 49_66 | 59 | 330.0 | Topological domain | Cytoplasmic | |
Tgene | NIPA1 | chr15:57213296 | chr15:23062319 | ENST00000337435 | 0 | 5 | 28_48 | 59 | 330.0 | Transmembrane | Helical |
Top |
Fusion Gene Sequence for TCF12-NIPA1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>89714_89714_1_TCF12-NIPA1_TCF12_chr15_57213296_ENST00000267811_NIPA1_chr15_23062319_ENST00000337435_length(transcript)=6816nt_BP=452nt CGCGGAGGGATCCGGAGGCGAGCCGAGCGCGGTGGTGAGGCCGCCTCAGCGAAAAAAATGTCCGCCTGAAGAGACCCACAAGTTCTATTC GGGGGGACCGACAGCCCGCCCCGGGAGGAAGGGGCGGCCAGGCCCGAAAGCCGCCTCCCCCTCCCAGACCCGAGAGCTCGTGCGGGGCAA AGTGAACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCGGGGTGGTTGGATGCGGAG ACGGGGCGGCAGGACCTGCTAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGCGA CCTACTGGACTTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGGAAAACTAGACCAACTACACTGGGAAGCAGTCAATTCAGTGGATC AGGTACTTCCTATTTAACAGACATTGTGTGGTGGGCTGGCACAATCGCAATGGCTGTTGGCCAGATTGGAAACTTCCTGGCTTACACGGC GGTCCCCACGGTCCTGGTAACCCCCCTGGGCGCCCTTGGAGTACCGTTCGGGTCCATTTTAGCTTCCTATCTCCTGAAGGAAAAGCTCAA CATCTTGGGCAAGTTGGGGTGCCTGCTAAGCTGTGCAGGCTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTGACAACTCA GGCTGAGCTGGAGGAAAAGCTGACCAATCCAGTGTTTGTGGGCTACCTGTGCATCGTGCTGCTCATGCTGCTGCTGCTCATCTTCTGGAT CGCGCCGGCCCATGGGCCCACCAACATCATGGTCTACATCAGCATCTGCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGCAT CGGGCTGGCGGCCCAAGACATCTTGCATAACAACCCGTCCAGTCAGAGAGCCCTCTGCCTGTGCCTGGTACTCCTGGCCGTGCTCGGCTG CAGCATCATCGTCCAGTTCAGGTACATCAACAAGGCGCTGGAGTGCTTCGACTCCTCGGTGTTCGGGGCCATCTACTACGTCGTGTTTAC CACGCTGGTCCTGCTGGCCTCAGCCATCCTCTTCCGGGAGTGGAGCAACGTGGGCCTGGTGGACTTCTTGGGGATGGCCTGTGGATTCAC GACCGTCTCCGTGGGGATTGTCCTTATACAGGTGTTCAAAGAGTTCAATTTCAACCTTGGGGAGATGAACAAATCTAATATGAAAACAGA CTAGATTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTC GATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGAGCAGAGGCCCAGCCAG CCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAGACGAATCTCATTTTCATTTCCATTAACCTGGAAG CTTTCATGAATATTCTCTTCTTTTAAAACATTTTAACATTATTTAAACAGAAAAAGATGGGCTCTTTCTGGTTAGTTGTTACATGATAGC AGAGATATTTTTACTTAGATTACTTTGGGAATGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTGTTA GTTTGCATTAAGCATGTATAACATTCAAGTATGTCATCCAAATAAGAGGCATATACATTGAATTGTTTTTAATCCTCTGACAAGTTGACT CTTCGACCCCCACCCCCACCCAAGACATTTTAATAGTAAATAGAGAGAGAGAGAAGAGTTAATGAACATGAGGTAGTGTTCCACTGGCAG GATGACTTTTCAATAGCTCAAATCAATTTCAGTGCCTTTATCACTTGAATTATTAACTTAATTTGACTCTTAATGTGTATATGTTCTTAG ATTAGAATAATGCAACTTCGAGTATGCTTTAATATTTCAATATTCAAGTTACAAATGTATAAGGCAGTTAGAAATAATACAGTCACATGT CACTTAATGATAGGGAAACATTCTGAGAAATGCATTGTAAGGTGACTTTATTGTGTGAACATCATGGAGTGCACTTATACAAACCTAGAT GGGACACCTATGACCCACCCAGGCCAGATGGTACAGCCTGTTGCTCCTGGGCCACACACCTGTACAGCATGTGACCGCACTGAATACCGC AGGCAATTGTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAACTATGGTATTACAATGTTATGGGACCACC GTCATGTAAGTGGTATGTCTTTGACAGAAACATGGTTACGTGGTTCATGACTGTATATTCACTGGAAGATAGTCAAGACTAAAGACACAT TAGAGCAAATTGACCCCTTTAACATGTGATTATTGTCCAATTAAAGACAGTTGATTTAAGTAGCATGAGGTATTATTTTATTTGTATTCG ATCTGTGTTACCTGGGATCCAGTATCAAATATATCCACATTCTTTATCAGCAAGCATTCATGGCCATTCAGAAGAAATAAATTAGGTAAC TTGATAATAAGGCTAAGTGGGAGAGTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAAAGGACACAATTG AGGTTAGGCTAGCTTCTACAAATTGCAATATGCAGTTTTTGAAAGATTTTCTAACAAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTT TGCAATGGCAGAGCATCCTAGAGTTCCTCAGCTAACCTCTCATTATGTGTCTTAAATGCAAAAGAGCCATTAATTATGCCAGTATTTGAA TCAAAGAGGTCATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATGAAGTGATGCACATATTTCACCACGGT ATCATGTACTTCATGGCCAGTGTTTTATCTCAGCAGGGAACTACGCCAAGTTGAAAGATGGGGTTGGGTAAAGTAGATTAGGTGAAGTAG AACATAAAATTGAATAGTACCCAATTAAAGTTCCTCAGTAAGAAAAAAAATGTGTTTTTGTAGGCAAAAAGAACATTTCTAAAGTCTCAA GGAATAGCTTCCTAAAGTGTTGAGTAAAGAGGCTAAATAAAATGAGACTAGTTTAATATAGAGAGAAAAATACCTTTATGGAGTAAACGT GTACATGATGATCATGGGTTGTCAGTGATTTGTGAACTGAGAGCAGCAACAACATTATTTTTTAAAAATCTTAAATCCTCTCAATGGATG GTTAACAAATGCTCAAAGTCCATTACTCTTTTTATTGGCTCTTGCAGGTTTTGTGTTTTATCATCAGTGCTTTTAGAAATGCAGGCCTTA ACTTACTGAACTGAACTTTCTGAAAACGTAATGTAGCAGTATCAATATACTTTTGGGCATAAAAATAGTTTCCTAGGTAAGGGGTGTGAG ATATTCAAAGAATACATGTGGCTAACAAGTGTAATGAGAAAGTTCATGTGTCACATGAAAATGATCATGTTTGTGTTGCTACAGCTTTTG TGGGAAATTTAGTTTAAAGGCAGCTCTTGGTGTACCTTAGTATATTTTAATCCACAATTATACCATTGATACTGAGAGGTGATACCCGAT GATCTTCTCTATAATATTCTTAGAGTAAAACAAAATCTCAAAAGTATTAATAGCTCTTCTACCCTTGAAGGTGACTGGTCCTGGGACAGT TAGAATCTTTCAGGTTTACCTCTGTTCAGCAGATACTTCAGTAGGATACATAGCTTTTCTTCCAGTGAAACAAAGTTCATATCATCCATT GTTTTTCAAGCACGTGACACCAGCCTCAAAGTAAATGACATGACCAGTGGTTGAACAGTCTAATTTTCAAATTTAATATAGAGCATATAA CTTCTGATTTGATAGTATTTATTTTAAAAAATTATGTTTTCATCATTCATTTGAAAATGAAAAAGCCCCAAAGTGAGAACTTTGGGGGAG GGCCTAGAACATGGATAGATCTCTTAGTGGTCTTTCCAAAAGTACATGTACTTGAAATATTTTCATTATCATACTATTCTTTGAAAAAAA AGATGCTTACTGTATACTTGTTTTCAAGCATCCTCTAAAATCAAAGGTTTTGATCACAATATGCAGATTTCTCTTGATAGATACTTAAAT AGGCTATTTCTCTCCTCTTCTTGGGCAATGCCTTGTTTTCTCCTCTGAATATTTGCATTTGAAAGGATTGCTTCCTGTTCTGCTCATTGA TCAAAGGTAGGGCCAATTAAGGATTCTAACCCTAACCCAGCACCACAAAGCCCCCCTGGAGCATCTTCCCGGCTGGCAGGACCATGCCAT CTCTGTGGAGAAGGTGCTGGGGAGGGAAGTCCTTCCAGTGCCACATGGAGTGAGGCCCTGCCCATGCTGGGGACTTTGGGGAGGAATTTG GTATTCTGGTGGCCTTGCTCAGCTCTCATTGAGATCTTTTCCTATCAGAATGTTAGTGAATATACTTCGCAGCTCTTTGTTCAGCAATAA GGAATATTCTTTCAATTCCTGCTCTTCAAGCCAATTTACTACACCCAGTTGTCTTTCCAGAAGTTCATCCCAGCGGTAATATGTTGGTGT TTGTTCTTCTTTGGATTTCACATCTGTTTTCTGGTAGAAGTGAGCACTGTTCACTTGTGCAGTCGTCTTATTTTCCTTCTTCCTAGATGA CTCAGCTCTTTGTAAATGTTGTGCTCAACTTCTAGGGGCCAGTTCTAGACTTTGGAGATGCAGTGTCTCCCAGGTGTGCACGGACACCTG GTCCGTGGAAACAGGTGTGATGGGCACAGGCTGCTGCCCTTCTGTCTGGTCGGGGGATTCCTCTTCTTCAAGCTGCTCAGCTAACCCAGA AGAGGGGAGAGAGTACTCCGGTGGTTCCCAGAGCCCCTCCCGTTGTGCCGCTTCGACCTGACACCTGCTCGATGCTGACTTAGGCTTCCT GCCACCAAGCAGGAAACTAGAAAGAGAACATTTCAGTGTAAGGTCTGTTCCCGACAGCATGGATTAGCTTCCGTGTTCTGAAGTTGTTCT TTTCATGGTGTCTGACACCGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCCTTCTCAGGGACCAAAAAT GTATCATTGACTCCTTAACAGTGACCTTCCTCCCAAGGACATATCCGTGTTCATTTTTCATAGGTTTTACTCATATTCATAGGTAGATTC TGTTAATGTGAGTTGGAAAGAAAAGACCAATTTGTACACCAGTCACACCACAAGACAGTTTATCATATAAAATACCTCAATTTTTTGTAT TCCTCATTTCCACCTCACAATTGTACTGGTGATGAATTTTAAGGGTCTGTCCTTTAGCTTATAGGTGATGTTTCACATCTGGCCAGATTC TTATACCTCCATTGTATACTTGAAAAGGTTCAGAATTACAGGAACAGCAGTGAGAATTTGGCCCACTACCACGACTCATTTGTTTCATTC ACATTCCTCACGTGCAACAACATAATTATATTTTAAGAAAATGTAACTTTGTTACATCAAAATATGTTGTCTAGTAAAAAGTTGATATTC AGTAGAACAAGGATCATGTAAATAAACATCTATTTCACATGTACCCAAAAGCATTTAAAAAGCAGAATCCAGGGCCCAGAGCATGAGCCA GGGAGGAGGATGTTTTTCTTCTTTTCTCTATTTTTCCCTAAATTGTGCAAACATAGGTGAGTCTCTTAACCTTTCTGTGCCTCAGTTTTT CTACCTCTAAAGGGGTGGGATGGTTCTTCAAATTGTTTCTAAAACACCGGCACTTTCAGCAGTGTTCTGGTGGCCTGAGATGAGAGCACC GTGTTCAGAAGTGCCTGGGAGTGGCACAGTGGAAACTCCGCTTGCACGGACCATGGAGTCTGCTCAGGACCATGCTGTAGGACACACAGC CTCATGCGCTGAGAAAGCAAAGGAAGTGCTGGGTGTAAAGTTTGCATGATTCCATGAAGCTTTAGTTTTCCTTTTTTTGTTTTAAAAGAA AGGGTTTTATATGTTCTATTGTAAAATATGGAAATTAAACAGGGACTTCAGAAAGCCGCACAGAAAGATCACCTTCCGATGGTGTGATGT GCTCCTGACATTCGGCCGAGGTCTGTATTCTGAAAAAGATTTAATGGCCTGTGAAACACGTGGATTCTGTTGCACTGGATTTGTAATAAA TGACGCTGAACTTCCTGCTTCCAAGCAGCTCAACCCTGATGCTGAACTGACACCAGGCGAATGTCAGGGCTCCCAAACCACTAGTGCCAA AGGGTCATGTTGAAAAGTTCAGAATATTTATTTGTCAGAATATAATAATTGCCCCCCACCTTAGTATTTTTGCACTTTACAGAAATTTAG ATACTGTTTTTCAGTGGCTTGAGCGTTTTGCCTTTTCAAAGGATAACTATTATTTTCTTGAAAATGGAATATAATCATGAGAGGAAGAAG ATGTAAAAAATGTCAAATGTTGATTGGTTGTGTAAAAGTTTTGTCATAGACATGTATTGGGGAGCTTCCAATTAGCATACATAGACACAT GTGTCAGTGGCCAAGACCTGCTTATATTTTGCTTTATAGATGTAGTCATAGCATGTTGTTATTGCCTCATGTAAATAAAAAGGCTATTAA >89714_89714_1_TCF12-NIPA1_TCF12_chr15_57213296_ENST00000267811_NIPA1_chr15_23062319_ENST00000337435_length(amino acids)=319AA_BP=49 MNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGTSYLTDIVWWAGTIAMAVGQIGNFLAYTAVPTVLVTPLGA LGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSPKSESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMV YISICSLLGSFTVPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVFGAIYYVVFTTLVLLASAILF -------------------------------------------------------------- >89714_89714_2_TCF12-NIPA1_TCF12_chr15_57213296_ENST00000333725_NIPA1_chr15_23062319_ENST00000337435_length(transcript)=6747nt_BP=383nt AGAGACCCACAAGTTCTATTCGGGGGGACCGACAGCCCGCCCCGGGAGGAAGGGGCGGCCAGGCCCGAAAGCCGCCTCCCCCTCCCAGAC CCGAGAGCTCGTGCGGGGCAAAGTGAACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAA TCGGGGTGGTTGGATGCGGAGACGGGGCGGCAGGACCTGCTAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGG GACCGACAAGGAGCTGAGCGACCTACTGGACTTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGGAAAACTAGACCAACTACACTGGG AAGCAGTCAATTCAGTGGATCAGGTACTTCCTATTTAACAGACATTGTGTGGTGGGCTGGCACAATCGCAATGGCTGTTGGCCAGATTGG AAACTTCCTGGCTTACACGGCGGTCCCCACGGTCCTGGTAACCCCCCTGGGCGCCCTTGGAGTACCGTTCGGGTCCATTTTAGCTTCCTA TCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGTTGGGGTGCCTGCTAAGCTGTGCAGGCTCCGTCGTGCTGATTATCCACTCCCCAAA GTCTGAGAGTGTGACAACTCAGGCTGAGCTGGAGGAAAAGCTGACCAATCCAGTGTTTGTGGGCTACCTGTGCATCGTGCTGCTCATGCT GCTGCTGCTCATCTTCTGGATCGCGCCGGCCCATGGGCCCACCAACATCATGGTCTACATCAGCATCTGCTCCTTGCTGGGCAGTTTCAC CGTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAACCCGTCCAGTCAGAGAGCCCTCTGCCTGTGCCTGGT ACTCCTGGCCGTGCTCGGCTGCAGCATCATCGTCCAGTTCAGGTACATCAACAAGGCGCTGGAGTGCTTCGACTCCTCGGTGTTCGGGGC CATCTACTACGTCGTGTTTACCACGCTGGTCCTGCTGGCCTCAGCCATCCTCTTCCGGGAGTGGAGCAACGTGGGCCTGGTGGACTTCTT GGGGATGGCCTGTGGATTCACGACCGTCTCCGTGGGGATTGTCCTTATACAGGTGTTCAAAGAGTTCAATTTCAACCTTGGGGAGATGAA CAAATCTAATATGAAAACAGACTAGATTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGA TGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCA CCAGAGCAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAGACGAATCTCATTT TCATTTCCATTAACCTGGAAGCTTTCATGAATATTCTCTTCTTTTAAAACATTTTAACATTATTTAAACAGAAAAAGATGGGCTCTTTCT GGTTAGTTGTTACATGATAGCAGAGATATTTTTACTTAGATTACTTTGGGAATGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTG AATGTGTCTGTAGTTGTGTTAGTTTGCATTAAGCATGTATAACATTCAAGTATGTCATCCAAATAAGAGGCATATACATTGAATTGTTTT TAATCCTCTGACAAGTTGACTCTTCGACCCCCACCCCCACCCAAGACATTTTAATAGTAAATAGAGAGAGAGAGAAGAGTTAATGAACAT GAGGTAGTGTTCCACTGGCAGGATGACTTTTCAATAGCTCAAATCAATTTCAGTGCCTTTATCACTTGAATTATTAACTTAATTTGACTC TTAATGTGTATATGTTCTTAGATTAGAATAATGCAACTTCGAGTATGCTTTAATATTTCAATATTCAAGTTACAAATGTATAAGGCAGTT AGAAATAATACAGTCACATGTCACTTAATGATAGGGAAACATTCTGAGAAATGCATTGTAAGGTGACTTTATTGTGTGAACATCATGGAG TGCACTTATACAAACCTAGATGGGACACCTATGACCCACCCAGGCCAGATGGTACAGCCTGTTGCTCCTGGGCCACACACCTGTACAGCA TGTGACCGCACTGAATACCGCAGGCAATTGTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAACTATGGTA TTACAATGTTATGGGACCACCGTCATGTAAGTGGTATGTCTTTGACAGAAACATGGTTACGTGGTTCATGACTGTATATTCACTGGAAGA TAGTCAAGACTAAAGACACATTAGAGCAAATTGACCCCTTTAACATGTGATTATTGTCCAATTAAAGACAGTTGATTTAAGTAGCATGAG GTATTATTTTATTTGTATTCGATCTGTGTTACCTGGGATCCAGTATCAAATATATCCACATTCTTTATCAGCAAGCATTCATGGCCATTC AGAAGAAATAAATTAGGTAACTTGATAATAAGGCTAAGTGGGAGAGTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGA ACAAGTTAAAGGACACAATTGAGGTTAGGCTAGCTTCTACAAATTGCAATATGCAGTTTTTGAAAGATTTTCTAACAAAAAGCCAATAAA TGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCTAGAGTTCCTCAGCTAACCTCTCATTATGTGTCTTAAATGCAAAAGAGCCA TTAATTATGCCAGTATTTGAATCAAAGAGGTCATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATGAAGTG ATGCACATATTTCACCACGGTATCATGTACTTCATGGCCAGTGTTTTATCTCAGCAGGGAACTACGCCAAGTTGAAAGATGGGGTTGGGT AAAGTAGATTAGGTGAAGTAGAACATAAAATTGAATAGTACCCAATTAAAGTTCCTCAGTAAGAAAAAAAATGTGTTTTTGTAGGCAAAA AGAACATTTCTAAAGTCTCAAGGAATAGCTTCCTAAAGTGTTGAGTAAAGAGGCTAAATAAAATGAGACTAGTTTAATATAGAGAGAAAA ATACCTTTATGGAGTAAACGTGTACATGATGATCATGGGTTGTCAGTGATTTGTGAACTGAGAGCAGCAACAACATTATTTTTTAAAAAT CTTAAATCCTCTCAATGGATGGTTAACAAATGCTCAAAGTCCATTACTCTTTTTATTGGCTCTTGCAGGTTTTGTGTTTTATCATCAGTG CTTTTAGAAATGCAGGCCTTAACTTACTGAACTGAACTTTCTGAAAACGTAATGTAGCAGTATCAATATACTTTTGGGCATAAAAATAGT TTCCTAGGTAAGGGGTGTGAGATATTCAAAGAATACATGTGGCTAACAAGTGTAATGAGAAAGTTCATGTGTCACATGAAAATGATCATG TTTGTGTTGCTACAGCTTTTGTGGGAAATTTAGTTTAAAGGCAGCTCTTGGTGTACCTTAGTATATTTTAATCCACAATTATACCATTGA TACTGAGAGGTGATACCCGATGATCTTCTCTATAATATTCTTAGAGTAAAACAAAATCTCAAAAGTATTAATAGCTCTTCTACCCTTGAA GGTGACTGGTCCTGGGACAGTTAGAATCTTTCAGGTTTACCTCTGTTCAGCAGATACTTCAGTAGGATACATAGCTTTTCTTCCAGTGAA ACAAAGTTCATATCATCCATTGTTTTTCAAGCACGTGACACCAGCCTCAAAGTAAATGACATGACCAGTGGTTGAACAGTCTAATTTTCA AATTTAATATAGAGCATATAACTTCTGATTTGATAGTATTTATTTTAAAAAATTATGTTTTCATCATTCATTTGAAAATGAAAAAGCCCC AAAGTGAGAACTTTGGGGGAGGGCCTAGAACATGGATAGATCTCTTAGTGGTCTTTCCAAAAGTACATGTACTTGAAATATTTTCATTAT CATACTATTCTTTGAAAAAAAAGATGCTTACTGTATACTTGTTTTCAAGCATCCTCTAAAATCAAAGGTTTTGATCACAATATGCAGATT TCTCTTGATAGATACTTAAATAGGCTATTTCTCTCCTCTTCTTGGGCAATGCCTTGTTTTCTCCTCTGAATATTTGCATTTGAAAGGATT GCTTCCTGTTCTGCTCATTGATCAAAGGTAGGGCCAATTAAGGATTCTAACCCTAACCCAGCACCACAAAGCCCCCCTGGAGCATCTTCC CGGCTGGCAGGACCATGCCATCTCTGTGGAGAAGGTGCTGGGGAGGGAAGTCCTTCCAGTGCCACATGGAGTGAGGCCCTGCCCATGCTG GGGACTTTGGGGAGGAATTTGGTATTCTGGTGGCCTTGCTCAGCTCTCATTGAGATCTTTTCCTATCAGAATGTTAGTGAATATACTTCG CAGCTCTTTGTTCAGCAATAAGGAATATTCTTTCAATTCCTGCTCTTCAAGCCAATTTACTACACCCAGTTGTCTTTCCAGAAGTTCATC CCAGCGGTAATATGTTGGTGTTTGTTCTTCTTTGGATTTCACATCTGTTTTCTGGTAGAAGTGAGCACTGTTCACTTGTGCAGTCGTCTT ATTTTCCTTCTTCCTAGATGACTCAGCTCTTTGTAAATGTTGTGCTCAACTTCTAGGGGCCAGTTCTAGACTTTGGAGATGCAGTGTCTC CCAGGTGTGCACGGACACCTGGTCCGTGGAAACAGGTGTGATGGGCACAGGCTGCTGCCCTTCTGTCTGGTCGGGGGATTCCTCTTCTTC AAGCTGCTCAGCTAACCCAGAAGAGGGGAGAGAGTACTCCGGTGGTTCCCAGAGCCCCTCCCGTTGTGCCGCTTCGACCTGACACCTGCT CGATGCTGACTTAGGCTTCCTGCCACCAAGCAGGAAACTAGAAAGAGAACATTTCAGTGTAAGGTCTGTTCCCGACAGCATGGATTAGCT TCCGTGTTCTGAAGTTGTTCTTTTCATGGTGTCTGACACCGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTT GCCTTCTCAGGGACCAAAAATGTATCATTGACTCCTTAACAGTGACCTTCCTCCCAAGGACATATCCGTGTTCATTTTTCATAGGTTTTA CTCATATTCATAGGTAGATTCTGTTAATGTGAGTTGGAAAGAAAAGACCAATTTGTACACCAGTCACACCACAAGACAGTTTATCATATA AAATACCTCAATTTTTTGTATTCCTCATTTCCACCTCACAATTGTACTGGTGATGAATTTTAAGGGTCTGTCCTTTAGCTTATAGGTGAT GTTTCACATCTGGCCAGATTCTTATACCTCCATTGTATACTTGAAAAGGTTCAGAATTACAGGAACAGCAGTGAGAATTTGGCCCACTAC CACGACTCATTTGTTTCATTCACATTCCTCACGTGCAACAACATAATTATATTTTAAGAAAATGTAACTTTGTTACATCAAAATATGTTG TCTAGTAAAAAGTTGATATTCAGTAGAACAAGGATCATGTAAATAAACATCTATTTCACATGTACCCAAAAGCATTTAAAAAGCAGAATC CAGGGCCCAGAGCATGAGCCAGGGAGGAGGATGTTTTTCTTCTTTTCTCTATTTTTCCCTAAATTGTGCAAACATAGGTGAGTCTCTTAA CCTTTCTGTGCCTCAGTTTTTCTACCTCTAAAGGGGTGGGATGGTTCTTCAAATTGTTTCTAAAACACCGGCACTTTCAGCAGTGTTCTG GTGGCCTGAGATGAGAGCACCGTGTTCAGAAGTGCCTGGGAGTGGCACAGTGGAAACTCCGCTTGCACGGACCATGGAGTCTGCTCAGGA CCATGCTGTAGGACACACAGCCTCATGCGCTGAGAAAGCAAAGGAAGTGCTGGGTGTAAAGTTTGCATGATTCCATGAAGCTTTAGTTTT CCTTTTTTTGTTTTAAAAGAAAGGGTTTTATATGTTCTATTGTAAAATATGGAAATTAAACAGGGACTTCAGAAAGCCGCACAGAAAGAT CACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGAGGTCTGTATTCTGAAAAAGATTTAATGGCCTGTGAAACACGTGGATTCTG TTGCACTGGATTTGTAATAAATGACGCTGAACTTCCTGCTTCCAAGCAGCTCAACCCTGATGCTGAACTGACACCAGGCGAATGTCAGGG CTCCCAAACCACTAGTGCCAAAGGGTCATGTTGAAAAGTTCAGAATATTTATTTGTCAGAATATAATAATTGCCCCCCACCTTAGTATTT TTGCACTTTACAGAAATTTAGATACTGTTTTTCAGTGGCTTGAGCGTTTTGCCTTTTCAAAGGATAACTATTATTTTCTTGAAAATGGAA TATAATCATGAGAGGAAGAAGATGTAAAAAATGTCAAATGTTGATTGGTTGTGTAAAAGTTTTGTCATAGACATGTATTGGGGAGCTTCC AATTAGCATACATAGACACATGTGTCAGTGGCCAAGACCTGCTTATATTTTGCTTTATAGATGTAGTCATAGCATGTTGTTATTGCCTCA >89714_89714_2_TCF12-NIPA1_TCF12_chr15_57213296_ENST00000333725_NIPA1_chr15_23062319_ENST00000337435_length(amino acids)=319AA_BP=49 MNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGTSYLTDIVWWAGTIAMAVGQIGNFLAYTAVPTVLVTPLGA LGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSPKSESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMV YISICSLLGSFTVPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVFGAIYYVVFTTLVLLASAILF -------------------------------------------------------------- >89714_89714_3_TCF12-NIPA1_TCF12_chr15_57213296_ENST00000438423_NIPA1_chr15_23062319_ENST00000337435_length(transcript)=6808nt_BP=444nt GGCGCGGAGGGATCCGGAGGCGAGCCGAGCGCGGTGGTGAGGCCGCCTCAGCGAAAAAAATGTCCGCCTGAAGAGACCCACAAGTTCTAT TCGGGGGGACCGACAGCCCGCCCCGGGAGGAAGGGGCGGCCAGGCCCGAAAGCCGCCTCCCCCTCCCAGACCCGAGAGCTCGTGCGGGGC AAAGTGAACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCGGGGTGGTTGGATGCGG AGACGGGGCGGCAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGCGACCTACTGG ACTTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGGAAAACTAGACCAACTACACTGGGAAGCAGTCAATTCAGTGGATCAGGTACTT CCTATTTAACAGACATTGTGTGGTGGGCTGGCACAATCGCAATGGCTGTTGGCCAGATTGGAAACTTCCTGGCTTACACGGCGGTCCCCA CGGTCCTGGTAACCCCCCTGGGCGCCCTTGGAGTACCGTTCGGGTCCATTTTAGCTTCCTATCTCCTGAAGGAAAAGCTCAACATCTTGG GCAAGTTGGGGTGCCTGCTAAGCTGTGCAGGCTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTGACAACTCAGGCTGAGC TGGAGGAAAAGCTGACCAATCCAGTGTTTGTGGGCTACCTGTGCATCGTGCTGCTCATGCTGCTGCTGCTCATCTTCTGGATCGCGCCGG CCCATGGGCCCACCAACATCATGGTCTACATCAGCATCTGCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGCATCGGGCTGG CGGCCCAAGACATCTTGCATAACAACCCGTCCAGTCAGAGAGCCCTCTGCCTGTGCCTGGTACTCCTGGCCGTGCTCGGCTGCAGCATCA TCGTCCAGTTCAGGTACATCAACAAGGCGCTGGAGTGCTTCGACTCCTCGGTGTTCGGGGCCATCTACTACGTCGTGTTTACCACGCTGG TCCTGCTGGCCTCAGCCATCCTCTTCCGGGAGTGGAGCAACGTGGGCCTGGTGGACTTCTTGGGGATGGCCTGTGGATTCACGACCGTCT CCGTGGGGATTGTCCTTATACAGGTGTTCAAAGAGTTCAATTTCAACCTTGGGGAGATGAACAAATCTAATATGAAAACAGACTAGATTG CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGG TGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGAGCAGAGGCCCAGCCAGCCCTCTGC AGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAGACGAATCTCATTTTCATTTCCATTAACCTGGAAGCTTTCATG AATATTCTCTTCTTTTAAAACATTTTAACATTATTTAAACAGAAAAAGATGGGCTCTTTCTGGTTAGTTGTTACATGATAGCAGAGATAT TTTTACTTAGATTACTTTGGGAATGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTGTTAGTTTGCAT TAAGCATGTATAACATTCAAGTATGTCATCCAAATAAGAGGCATATACATTGAATTGTTTTTAATCCTCTGACAAGTTGACTCTTCGACC CCCACCCCCACCCAAGACATTTTAATAGTAAATAGAGAGAGAGAGAAGAGTTAATGAACATGAGGTAGTGTTCCACTGGCAGGATGACTT TTCAATAGCTCAAATCAATTTCAGTGCCTTTATCACTTGAATTATTAACTTAATTTGACTCTTAATGTGTATATGTTCTTAGATTAGAAT AATGCAACTTCGAGTATGCTTTAATATTTCAATATTCAAGTTACAAATGTATAAGGCAGTTAGAAATAATACAGTCACATGTCACTTAAT GATAGGGAAACATTCTGAGAAATGCATTGTAAGGTGACTTTATTGTGTGAACATCATGGAGTGCACTTATACAAACCTAGATGGGACACC TATGACCCACCCAGGCCAGATGGTACAGCCTGTTGCTCCTGGGCCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATT GTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAACTATGGTATTACAATGTTATGGGACCACCGTCATGTA AGTGGTATGTCTTTGACAGAAACATGGTTACGTGGTTCATGACTGTATATTCACTGGAAGATAGTCAAGACTAAAGACACATTAGAGCAA ATTGACCCCTTTAACATGTGATTATTGTCCAATTAAAGACAGTTGATTTAAGTAGCATGAGGTATTATTTTATTTGTATTCGATCTGTGT TACCTGGGATCCAGTATCAAATATATCCACATTCTTTATCAGCAAGCATTCATGGCCATTCAGAAGAAATAAATTAGGTAACTTGATAAT AAGGCTAAGTGGGAGAGTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAAAGGACACAATTGAGGTTAGG CTAGCTTCTACAAATTGCAATATGCAGTTTTTGAAAGATTTTCTAACAAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGG CAGAGCATCCTAGAGTTCCTCAGCTAACCTCTCATTATGTGTCTTAAATGCAAAAGAGCCATTAATTATGCCAGTATTTGAATCAAAGAG GTCATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATGAAGTGATGCACATATTTCACCACGGTATCATGTA CTTCATGGCCAGTGTTTTATCTCAGCAGGGAACTACGCCAAGTTGAAAGATGGGGTTGGGTAAAGTAGATTAGGTGAAGTAGAACATAAA ATTGAATAGTACCCAATTAAAGTTCCTCAGTAAGAAAAAAAATGTGTTTTTGTAGGCAAAAAGAACATTTCTAAAGTCTCAAGGAATAGC TTCCTAAAGTGTTGAGTAAAGAGGCTAAATAAAATGAGACTAGTTTAATATAGAGAGAAAAATACCTTTATGGAGTAAACGTGTACATGA TGATCATGGGTTGTCAGTGATTTGTGAACTGAGAGCAGCAACAACATTATTTTTTAAAAATCTTAAATCCTCTCAATGGATGGTTAACAA ATGCTCAAAGTCCATTACTCTTTTTATTGGCTCTTGCAGGTTTTGTGTTTTATCATCAGTGCTTTTAGAAATGCAGGCCTTAACTTACTG AACTGAACTTTCTGAAAACGTAATGTAGCAGTATCAATATACTTTTGGGCATAAAAATAGTTTCCTAGGTAAGGGGTGTGAGATATTCAA AGAATACATGTGGCTAACAAGTGTAATGAGAAAGTTCATGTGTCACATGAAAATGATCATGTTTGTGTTGCTACAGCTTTTGTGGGAAAT TTAGTTTAAAGGCAGCTCTTGGTGTACCTTAGTATATTTTAATCCACAATTATACCATTGATACTGAGAGGTGATACCCGATGATCTTCT CTATAATATTCTTAGAGTAAAACAAAATCTCAAAAGTATTAATAGCTCTTCTACCCTTGAAGGTGACTGGTCCTGGGACAGTTAGAATCT TTCAGGTTTACCTCTGTTCAGCAGATACTTCAGTAGGATACATAGCTTTTCTTCCAGTGAAACAAAGTTCATATCATCCATTGTTTTTCA AGCACGTGACACCAGCCTCAAAGTAAATGACATGACCAGTGGTTGAACAGTCTAATTTTCAAATTTAATATAGAGCATATAACTTCTGAT TTGATAGTATTTATTTTAAAAAATTATGTTTTCATCATTCATTTGAAAATGAAAAAGCCCCAAAGTGAGAACTTTGGGGGAGGGCCTAGA ACATGGATAGATCTCTTAGTGGTCTTTCCAAAAGTACATGTACTTGAAATATTTTCATTATCATACTATTCTTTGAAAAAAAAGATGCTT ACTGTATACTTGTTTTCAAGCATCCTCTAAAATCAAAGGTTTTGATCACAATATGCAGATTTCTCTTGATAGATACTTAAATAGGCTATT TCTCTCCTCTTCTTGGGCAATGCCTTGTTTTCTCCTCTGAATATTTGCATTTGAAAGGATTGCTTCCTGTTCTGCTCATTGATCAAAGGT AGGGCCAATTAAGGATTCTAACCCTAACCCAGCACCACAAAGCCCCCCTGGAGCATCTTCCCGGCTGGCAGGACCATGCCATCTCTGTGG AGAAGGTGCTGGGGAGGGAAGTCCTTCCAGTGCCACATGGAGTGAGGCCCTGCCCATGCTGGGGACTTTGGGGAGGAATTTGGTATTCTG GTGGCCTTGCTCAGCTCTCATTGAGATCTTTTCCTATCAGAATGTTAGTGAATATACTTCGCAGCTCTTTGTTCAGCAATAAGGAATATT CTTTCAATTCCTGCTCTTCAAGCCAATTTACTACACCCAGTTGTCTTTCCAGAAGTTCATCCCAGCGGTAATATGTTGGTGTTTGTTCTT CTTTGGATTTCACATCTGTTTTCTGGTAGAAGTGAGCACTGTTCACTTGTGCAGTCGTCTTATTTTCCTTCTTCCTAGATGACTCAGCTC TTTGTAAATGTTGTGCTCAACTTCTAGGGGCCAGTTCTAGACTTTGGAGATGCAGTGTCTCCCAGGTGTGCACGGACACCTGGTCCGTGG AAACAGGTGTGATGGGCACAGGCTGCTGCCCTTCTGTCTGGTCGGGGGATTCCTCTTCTTCAAGCTGCTCAGCTAACCCAGAAGAGGGGA GAGAGTACTCCGGTGGTTCCCAGAGCCCCTCCCGTTGTGCCGCTTCGACCTGACACCTGCTCGATGCTGACTTAGGCTTCCTGCCACCAA GCAGGAAACTAGAAAGAGAACATTTCAGTGTAAGGTCTGTTCCCGACAGCATGGATTAGCTTCCGTGTTCTGAAGTTGTTCTTTTCATGG TGTCTGACACCGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCCTTCTCAGGGACCAAAAATGTATCATT GACTCCTTAACAGTGACCTTCCTCCCAAGGACATATCCGTGTTCATTTTTCATAGGTTTTACTCATATTCATAGGTAGATTCTGTTAATG TGAGTTGGAAAGAAAAGACCAATTTGTACACCAGTCACACCACAAGACAGTTTATCATATAAAATACCTCAATTTTTTGTATTCCTCATT TCCACCTCACAATTGTACTGGTGATGAATTTTAAGGGTCTGTCCTTTAGCTTATAGGTGATGTTTCACATCTGGCCAGATTCTTATACCT CCATTGTATACTTGAAAAGGTTCAGAATTACAGGAACAGCAGTGAGAATTTGGCCCACTACCACGACTCATTTGTTTCATTCACATTCCT CACGTGCAACAACATAATTATATTTTAAGAAAATGTAACTTTGTTACATCAAAATATGTTGTCTAGTAAAAAGTTGATATTCAGTAGAAC AAGGATCATGTAAATAAACATCTATTTCACATGTACCCAAAAGCATTTAAAAAGCAGAATCCAGGGCCCAGAGCATGAGCCAGGGAGGAG GATGTTTTTCTTCTTTTCTCTATTTTTCCCTAAATTGTGCAAACATAGGTGAGTCTCTTAACCTTTCTGTGCCTCAGTTTTTCTACCTCT AAAGGGGTGGGATGGTTCTTCAAATTGTTTCTAAAACACCGGCACTTTCAGCAGTGTTCTGGTGGCCTGAGATGAGAGCACCGTGTTCAG AAGTGCCTGGGAGTGGCACAGTGGAAACTCCGCTTGCACGGACCATGGAGTCTGCTCAGGACCATGCTGTAGGACACACAGCCTCATGCG CTGAGAAAGCAAAGGAAGTGCTGGGTGTAAAGTTTGCATGATTCCATGAAGCTTTAGTTTTCCTTTTTTTGTTTTAAAAGAAAGGGTTTT ATATGTTCTATTGTAAAATATGGAAATTAAACAGGGACTTCAGAAAGCCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGA CATTCGGCCGAGGTCTGTATTCTGAAAAAGATTTAATGGCCTGTGAAACACGTGGATTCTGTTGCACTGGATTTGTAATAAATGACGCTG AACTTCCTGCTTCCAAGCAGCTCAACCCTGATGCTGAACTGACACCAGGCGAATGTCAGGGCTCCCAAACCACTAGTGCCAAAGGGTCAT GTTGAAAAGTTCAGAATATTTATTTGTCAGAATATAATAATTGCCCCCCACCTTAGTATTTTTGCACTTTACAGAAATTTAGATACTGTT TTTCAGTGGCTTGAGCGTTTTGCCTTTTCAAAGGATAACTATTATTTTCTTGAAAATGGAATATAATCATGAGAGGAAGAAGATGTAAAA AATGTCAAATGTTGATTGGTTGTGTAAAAGTTTTGTCATAGACATGTATTGGGGAGCTTCCAATTAGCATACATAGACACATGTGTCAGT GGCCAAGACCTGCTTATATTTTGCTTTATAGATGTAGTCATAGCATGTTGTTATTGCCTCATGTAAATAAAAAGGCTATTAAGTTTTCCA >89714_89714_3_TCF12-NIPA1_TCF12_chr15_57213296_ENST00000438423_NIPA1_chr15_23062319_ENST00000337435_length(amino acids)=331AA_BP=61 MDAETGRQKWPKMNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGTSYLTDIVWWAGTIAMAVGQIGNFLAYT AVPTVLVTPLGALGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSPKSESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFW IAPAHGPTNIMVYISICSLLGSFTVPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVFGAIYYVVF -------------------------------------------------------------- >89714_89714_4_TCF12-NIPA1_TCF12_chr15_57213296_ENST00000452095_NIPA1_chr15_23062319_ENST00000337435_length(transcript)=6806nt_BP=442nt TCCGGAGGCGAGCCGAGCGCGGTGGTGAGGCCGCCTCAGCGAAAAAAATGTCCGCCTGAAGAGACCCACAAGTTCTATTCGGGGGGACCG ACAGCCCGCCCCGGGAGGAAGGGGCGGCCAGGCCCGAAAGCCGCCTCCCCCTCCCAGACCCGAGAGCTCGTGCGGGGCAAAGTGAACCGA GCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCGGGGTGGTTGGATGCGGAGACGGGGCGGC AGGACCTGCTAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGCGACCTACTGGAC TTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGGAAAACTAGACCAACTACACTGGGAAGCAGTCAATTCAGTGGATCAGGTACTTCC TATTTAACAGACATTGTGTGGTGGGCTGGCACAATCGCAATGGCTGTTGGCCAGATTGGAAACTTCCTGGCTTACACGGCGGTCCCCACG GTCCTGGTAACCCCCCTGGGCGCCCTTGGAGTACCGTTCGGGTCCATTTTAGCTTCCTATCTCCTGAAGGAAAAGCTCAACATCTTGGGC AAGTTGGGGTGCCTGCTAAGCTGTGCAGGCTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTGACAACTCAGGCTGAGCTG GAGGAAAAGCTGACCAATCCAGTGTTTGTGGGCTACCTGTGCATCGTGCTGCTCATGCTGCTGCTGCTCATCTTCTGGATCGCGCCGGCC CATGGGCCCACCAACATCATGGTCTACATCAGCATCTGCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGCATCGGGCTGGCG GCCCAAGACATCTTGCATAACAACCCGTCCAGTCAGAGAGCCCTCTGCCTGTGCCTGGTACTCCTGGCCGTGCTCGGCTGCAGCATCATC GTCCAGTTCAGGTACATCAACAAGGCGCTGGAGTGCTTCGACTCCTCGGTGTTCGGGGCCATCTACTACGTCGTGTTTACCACGCTGGTC CTGCTGGCCTCAGCCATCCTCTTCCGGGAGTGGAGCAACGTGGGCCTGGTGGACTTCTTGGGGATGGCCTGTGGATTCACGACCGTCTCC GTGGGGATTGTCCTTATACAGGTGTTCAAAGAGTTCAATTTCAACCTTGGGGAGATGAACAAATCTAATATGAAAACAGACTAGATTGCA ATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTG TTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGAGCAGAGGCCCAGCCAGCCCTCTGCAG CCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAGACGAATCTCATTTTCATTTCCATTAACCTGGAAGCTTTCATGAA TATTCTCTTCTTTTAAAACATTTTAACATTATTTAAACAGAAAAAGATGGGCTCTTTCTGGTTAGTTGTTACATGATAGCAGAGATATTT TTACTTAGATTACTTTGGGAATGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTGTTAGTTTGCATTA AGCATGTATAACATTCAAGTATGTCATCCAAATAAGAGGCATATACATTGAATTGTTTTTAATCCTCTGACAAGTTGACTCTTCGACCCC CACCCCCACCCAAGACATTTTAATAGTAAATAGAGAGAGAGAGAAGAGTTAATGAACATGAGGTAGTGTTCCACTGGCAGGATGACTTTT CAATAGCTCAAATCAATTTCAGTGCCTTTATCACTTGAATTATTAACTTAATTTGACTCTTAATGTGTATATGTTCTTAGATTAGAATAA TGCAACTTCGAGTATGCTTTAATATTTCAATATTCAAGTTACAAATGTATAAGGCAGTTAGAAATAATACAGTCACATGTCACTTAATGA TAGGGAAACATTCTGAGAAATGCATTGTAAGGTGACTTTATTGTGTGAACATCATGGAGTGCACTTATACAAACCTAGATGGGACACCTA TGACCCACCCAGGCCAGATGGTACAGCCTGTTGCTCCTGGGCCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGT AACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAACTATGGTATTACAATGTTATGGGACCACCGTCATGTAAG TGGTATGTCTTTGACAGAAACATGGTTACGTGGTTCATGACTGTATATTCACTGGAAGATAGTCAAGACTAAAGACACATTAGAGCAAAT TGACCCCTTTAACATGTGATTATTGTCCAATTAAAGACAGTTGATTTAAGTAGCATGAGGTATTATTTTATTTGTATTCGATCTGTGTTA CCTGGGATCCAGTATCAAATATATCCACATTCTTTATCAGCAAGCATTCATGGCCATTCAGAAGAAATAAATTAGGTAACTTGATAATAA GGCTAAGTGGGAGAGTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAAAGGACACAATTGAGGTTAGGCT AGCTTCTACAAATTGCAATATGCAGTTTTTGAAAGATTTTCTAACAAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCA GAGCATCCTAGAGTTCCTCAGCTAACCTCTCATTATGTGTCTTAAATGCAAAAGAGCCATTAATTATGCCAGTATTTGAATCAAAGAGGT CATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATGAAGTGATGCACATATTTCACCACGGTATCATGTACT TCATGGCCAGTGTTTTATCTCAGCAGGGAACTACGCCAAGTTGAAAGATGGGGTTGGGTAAAGTAGATTAGGTGAAGTAGAACATAAAAT TGAATAGTACCCAATTAAAGTTCCTCAGTAAGAAAAAAAATGTGTTTTTGTAGGCAAAAAGAACATTTCTAAAGTCTCAAGGAATAGCTT CCTAAAGTGTTGAGTAAAGAGGCTAAATAAAATGAGACTAGTTTAATATAGAGAGAAAAATACCTTTATGGAGTAAACGTGTACATGATG ATCATGGGTTGTCAGTGATTTGTGAACTGAGAGCAGCAACAACATTATTTTTTAAAAATCTTAAATCCTCTCAATGGATGGTTAACAAAT GCTCAAAGTCCATTACTCTTTTTATTGGCTCTTGCAGGTTTTGTGTTTTATCATCAGTGCTTTTAGAAATGCAGGCCTTAACTTACTGAA CTGAACTTTCTGAAAACGTAATGTAGCAGTATCAATATACTTTTGGGCATAAAAATAGTTTCCTAGGTAAGGGGTGTGAGATATTCAAAG AATACATGTGGCTAACAAGTGTAATGAGAAAGTTCATGTGTCACATGAAAATGATCATGTTTGTGTTGCTACAGCTTTTGTGGGAAATTT AGTTTAAAGGCAGCTCTTGGTGTACCTTAGTATATTTTAATCCACAATTATACCATTGATACTGAGAGGTGATACCCGATGATCTTCTCT ATAATATTCTTAGAGTAAAACAAAATCTCAAAAGTATTAATAGCTCTTCTACCCTTGAAGGTGACTGGTCCTGGGACAGTTAGAATCTTT CAGGTTTACCTCTGTTCAGCAGATACTTCAGTAGGATACATAGCTTTTCTTCCAGTGAAACAAAGTTCATATCATCCATTGTTTTTCAAG CACGTGACACCAGCCTCAAAGTAAATGACATGACCAGTGGTTGAACAGTCTAATTTTCAAATTTAATATAGAGCATATAACTTCTGATTT GATAGTATTTATTTTAAAAAATTATGTTTTCATCATTCATTTGAAAATGAAAAAGCCCCAAAGTGAGAACTTTGGGGGAGGGCCTAGAAC ATGGATAGATCTCTTAGTGGTCTTTCCAAAAGTACATGTACTTGAAATATTTTCATTATCATACTATTCTTTGAAAAAAAAGATGCTTAC TGTATACTTGTTTTCAAGCATCCTCTAAAATCAAAGGTTTTGATCACAATATGCAGATTTCTCTTGATAGATACTTAAATAGGCTATTTC TCTCCTCTTCTTGGGCAATGCCTTGTTTTCTCCTCTGAATATTTGCATTTGAAAGGATTGCTTCCTGTTCTGCTCATTGATCAAAGGTAG GGCCAATTAAGGATTCTAACCCTAACCCAGCACCACAAAGCCCCCCTGGAGCATCTTCCCGGCTGGCAGGACCATGCCATCTCTGTGGAG AAGGTGCTGGGGAGGGAAGTCCTTCCAGTGCCACATGGAGTGAGGCCCTGCCCATGCTGGGGACTTTGGGGAGGAATTTGGTATTCTGGT GGCCTTGCTCAGCTCTCATTGAGATCTTTTCCTATCAGAATGTTAGTGAATATACTTCGCAGCTCTTTGTTCAGCAATAAGGAATATTCT TTCAATTCCTGCTCTTCAAGCCAATTTACTACACCCAGTTGTCTTTCCAGAAGTTCATCCCAGCGGTAATATGTTGGTGTTTGTTCTTCT TTGGATTTCACATCTGTTTTCTGGTAGAAGTGAGCACTGTTCACTTGTGCAGTCGTCTTATTTTCCTTCTTCCTAGATGACTCAGCTCTT TGTAAATGTTGTGCTCAACTTCTAGGGGCCAGTTCTAGACTTTGGAGATGCAGTGTCTCCCAGGTGTGCACGGACACCTGGTCCGTGGAA ACAGGTGTGATGGGCACAGGCTGCTGCCCTTCTGTCTGGTCGGGGGATTCCTCTTCTTCAAGCTGCTCAGCTAACCCAGAAGAGGGGAGA GAGTACTCCGGTGGTTCCCAGAGCCCCTCCCGTTGTGCCGCTTCGACCTGACACCTGCTCGATGCTGACTTAGGCTTCCTGCCACCAAGC AGGAAACTAGAAAGAGAACATTTCAGTGTAAGGTCTGTTCCCGACAGCATGGATTAGCTTCCGTGTTCTGAAGTTGTTCTTTTCATGGTG TCTGACACCGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCCTTCTCAGGGACCAAAAATGTATCATTGA CTCCTTAACAGTGACCTTCCTCCCAAGGACATATCCGTGTTCATTTTTCATAGGTTTTACTCATATTCATAGGTAGATTCTGTTAATGTG AGTTGGAAAGAAAAGACCAATTTGTACACCAGTCACACCACAAGACAGTTTATCATATAAAATACCTCAATTTTTTGTATTCCTCATTTC CACCTCACAATTGTACTGGTGATGAATTTTAAGGGTCTGTCCTTTAGCTTATAGGTGATGTTTCACATCTGGCCAGATTCTTATACCTCC ATTGTATACTTGAAAAGGTTCAGAATTACAGGAACAGCAGTGAGAATTTGGCCCACTACCACGACTCATTTGTTTCATTCACATTCCTCA CGTGCAACAACATAATTATATTTTAAGAAAATGTAACTTTGTTACATCAAAATATGTTGTCTAGTAAAAAGTTGATATTCAGTAGAACAA GGATCATGTAAATAAACATCTATTTCACATGTACCCAAAAGCATTTAAAAAGCAGAATCCAGGGCCCAGAGCATGAGCCAGGGAGGAGGA TGTTTTTCTTCTTTTCTCTATTTTTCCCTAAATTGTGCAAACATAGGTGAGTCTCTTAACCTTTCTGTGCCTCAGTTTTTCTACCTCTAA AGGGGTGGGATGGTTCTTCAAATTGTTTCTAAAACACCGGCACTTTCAGCAGTGTTCTGGTGGCCTGAGATGAGAGCACCGTGTTCAGAA GTGCCTGGGAGTGGCACAGTGGAAACTCCGCTTGCACGGACCATGGAGTCTGCTCAGGACCATGCTGTAGGACACACAGCCTCATGCGCT GAGAAAGCAAAGGAAGTGCTGGGTGTAAAGTTTGCATGATTCCATGAAGCTTTAGTTTTCCTTTTTTTGTTTTAAAAGAAAGGGTTTTAT ATGTTCTATTGTAAAATATGGAAATTAAACAGGGACTTCAGAAAGCCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACA TTCGGCCGAGGTCTGTATTCTGAAAAAGATTTAATGGCCTGTGAAACACGTGGATTCTGTTGCACTGGATTTGTAATAAATGACGCTGAA CTTCCTGCTTCCAAGCAGCTCAACCCTGATGCTGAACTGACACCAGGCGAATGTCAGGGCTCCCAAACCACTAGTGCCAAAGGGTCATGT TGAAAAGTTCAGAATATTTATTTGTCAGAATATAATAATTGCCCCCCACCTTAGTATTTTTGCACTTTACAGAAATTTAGATACTGTTTT TCAGTGGCTTGAGCGTTTTGCCTTTTCAAAGGATAACTATTATTTTCTTGAAAATGGAATATAATCATGAGAGGAAGAAGATGTAAAAAA TGTCAAATGTTGATTGGTTGTGTAAAAGTTTTGTCATAGACATGTATTGGGGAGCTTCCAATTAGCATACATAGACACATGTGTCAGTGG CCAAGACCTGCTTATATTTTGCTTTATAGATGTAGTCATAGCATGTTGTTATTGCCTCATGTAAATAAAAAGGCTATTAAGTTTTCCAGT >89714_89714_4_TCF12-NIPA1_TCF12_chr15_57213296_ENST00000452095_NIPA1_chr15_23062319_ENST00000337435_length(amino acids)=319AA_BP=49 MNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGTSYLTDIVWWAGTIAMAVGQIGNFLAYTAVPTVLVTPLGA LGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSPKSESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMV YISICSLLGSFTVPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVFGAIYYVVFTTLVLLASAILF -------------------------------------------------------------- >89714_89714_5_TCF12-NIPA1_TCF12_chr15_57213296_ENST00000557843_NIPA1_chr15_23062319_ENST00000337435_length(transcript)=6599nt_BP=235nt GGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCGGGGTGGTTGGATGCGGAGACGGGGCGGCAGAAGTGGCCGAAGATG AATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGCGACCTACTGGACTTCAGTGCGATGTTTTCCCCACCTGTT AATAGTGGGAAAACTAGACCAACTACACTGGGAAGCAGTCAATTCAGTGGATCAGGTACTTCCTATTTAACAGACATTGTGTGGTGGGCT GGCACAATCGCAATGGCTGTTGGCCAGATTGGAAACTTCCTGGCTTACACGGCGGTCCCCACGGTCCTGGTAACCCCCCTGGGCGCCCTT GGAGTACCGTTCGGGTCCATTTTAGCTTCCTATCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGTTGGGGTGCCTGCTAAGCTGTGCA GGCTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTGACAACTCAGGCTGAGCTGGAGGAAAAGCTGACCAATCCAGTGTTT GTGGGCTACCTGTGCATCGTGCTGCTCATGCTGCTGCTGCTCATCTTCTGGATCGCGCCGGCCCATGGGCCCACCAACATCATGGTCTAC ATCAGCATCTGCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAACCCG TCCAGTCAGAGAGCCCTCTGCCTGTGCCTGGTACTCCTGGCCGTGCTCGGCTGCAGCATCATCGTCCAGTTCAGGTACATCAACAAGGCG CTGGAGTGCTTCGACTCCTCGGTGTTCGGGGCCATCTACTACGTCGTGTTTACCACGCTGGTCCTGCTGGCCTCAGCCATCCTCTTCCGG GAGTGGAGCAACGTGGGCCTGGTGGACTTCTTGGGGATGGCCTGTGGATTCACGACCGTCTCCGTGGGGATTGTCCTTATACAGGTGTTC AAAGAGTTCAATTTCAACCTTGGGGAGATGAACAAATCTAATATGAAAACAGACTAGATTGCAATAGGAGCTTGGATGGTTCGAGGAATA GGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTG GTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGAGCAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGC ACCATCTCTCTCTGATGAGACGAATCTCATTTTCATTTCCATTAACCTGGAAGCTTTCATGAATATTCTCTTCTTTTAAAACATTTTAAC ATTATTTAAACAGAAAAAGATGGGCTCTTTCTGGTTAGTTGTTACATGATAGCAGAGATATTTTTACTTAGATTACTTTGGGAATGAGAG ATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTGTTAGTTTGCATTAAGCATGTATAACATTCAAGTATGTCAT CCAAATAAGAGGCATATACATTGAATTGTTTTTAATCCTCTGACAAGTTGACTCTTCGACCCCCACCCCCACCCAAGACATTTTAATAGT AAATAGAGAGAGAGAGAAGAGTTAATGAACATGAGGTAGTGTTCCACTGGCAGGATGACTTTTCAATAGCTCAAATCAATTTCAGTGCCT TTATCACTTGAATTATTAACTTAATTTGACTCTTAATGTGTATATGTTCTTAGATTAGAATAATGCAACTTCGAGTATGCTTTAATATTT CAATATTCAAGTTACAAATGTATAAGGCAGTTAGAAATAATACAGTCACATGTCACTTAATGATAGGGAAACATTCTGAGAAATGCATTG TAAGGTGACTTTATTGTGTGAACATCATGGAGTGCACTTATACAAACCTAGATGGGACACCTATGACCCACCCAGGCCAGATGGTACAGC CTGTTGCTCCTGGGCCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACACAGTGGTGAGTATTTGTGTTTAC AAACATAGGAAAGGTACAGTAAAACTATGGTATTACAATGTTATGGGACCACCGTCATGTAAGTGGTATGTCTTTGACAGAAACATGGTT ACGTGGTTCATGACTGTATATTCACTGGAAGATAGTCAAGACTAAAGACACATTAGAGCAAATTGACCCCTTTAACATGTGATTATTGTC CAATTAAAGACAGTTGATTTAAGTAGCATGAGGTATTATTTTATTTGTATTCGATCTGTGTTACCTGGGATCCAGTATCAAATATATCCA CATTCTTTATCAGCAAGCATTCATGGCCATTCAGAAGAAATAAATTAGGTAACTTGATAATAAGGCTAAGTGGGAGAGTACCTGTTCAAT AGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAAAGGACACAATTGAGGTTAGGCTAGCTTCTACAAATTGCAATATGCAGTT TTTGAAAGATTTTCTAACAAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCTAGAGTTCCTCAGCTAACC TCTCATTATGTGTCTTAAATGCAAAAGAGCCATTAATTATGCCAGTATTTGAATCAAAGAGGTCATTCTCTGTCTATAGTGTTCCCATCC ATGTGTTCCAAATGGGAGCATAGCATGAAGTGATGCACATATTTCACCACGGTATCATGTACTTCATGGCCAGTGTTTTATCTCAGCAGG GAACTACGCCAAGTTGAAAGATGGGGTTGGGTAAAGTAGATTAGGTGAAGTAGAACATAAAATTGAATAGTACCCAATTAAAGTTCCTCA GTAAGAAAAAAAATGTGTTTTTGTAGGCAAAAAGAACATTTCTAAAGTCTCAAGGAATAGCTTCCTAAAGTGTTGAGTAAAGAGGCTAAA TAAAATGAGACTAGTTTAATATAGAGAGAAAAATACCTTTATGGAGTAAACGTGTACATGATGATCATGGGTTGTCAGTGATTTGTGAAC TGAGAGCAGCAACAACATTATTTTTTAAAAATCTTAAATCCTCTCAATGGATGGTTAACAAATGCTCAAAGTCCATTACTCTTTTTATTG GCTCTTGCAGGTTTTGTGTTTTATCATCAGTGCTTTTAGAAATGCAGGCCTTAACTTACTGAACTGAACTTTCTGAAAACGTAATGTAGC AGTATCAATATACTTTTGGGCATAAAAATAGTTTCCTAGGTAAGGGGTGTGAGATATTCAAAGAATACATGTGGCTAACAAGTGTAATGA GAAAGTTCATGTGTCACATGAAAATGATCATGTTTGTGTTGCTACAGCTTTTGTGGGAAATTTAGTTTAAAGGCAGCTCTTGGTGTACCT TAGTATATTTTAATCCACAATTATACCATTGATACTGAGAGGTGATACCCGATGATCTTCTCTATAATATTCTTAGAGTAAAACAAAATC TCAAAAGTATTAATAGCTCTTCTACCCTTGAAGGTGACTGGTCCTGGGACAGTTAGAATCTTTCAGGTTTACCTCTGTTCAGCAGATACT TCAGTAGGATACATAGCTTTTCTTCCAGTGAAACAAAGTTCATATCATCCATTGTTTTTCAAGCACGTGACACCAGCCTCAAAGTAAATG ACATGACCAGTGGTTGAACAGTCTAATTTTCAAATTTAATATAGAGCATATAACTTCTGATTTGATAGTATTTATTTTAAAAAATTATGT TTTCATCATTCATTTGAAAATGAAAAAGCCCCAAAGTGAGAACTTTGGGGGAGGGCCTAGAACATGGATAGATCTCTTAGTGGTCTTTCC AAAAGTACATGTACTTGAAATATTTTCATTATCATACTATTCTTTGAAAAAAAAGATGCTTACTGTATACTTGTTTTCAAGCATCCTCTA AAATCAAAGGTTTTGATCACAATATGCAGATTTCTCTTGATAGATACTTAAATAGGCTATTTCTCTCCTCTTCTTGGGCAATGCCTTGTT TTCTCCTCTGAATATTTGCATTTGAAAGGATTGCTTCCTGTTCTGCTCATTGATCAAAGGTAGGGCCAATTAAGGATTCTAACCCTAACC CAGCACCACAAAGCCCCCCTGGAGCATCTTCCCGGCTGGCAGGACCATGCCATCTCTGTGGAGAAGGTGCTGGGGAGGGAAGTCCTTCCA GTGCCACATGGAGTGAGGCCCTGCCCATGCTGGGGACTTTGGGGAGGAATTTGGTATTCTGGTGGCCTTGCTCAGCTCTCATTGAGATCT TTTCCTATCAGAATGTTAGTGAATATACTTCGCAGCTCTTTGTTCAGCAATAAGGAATATTCTTTCAATTCCTGCTCTTCAAGCCAATTT ACTACACCCAGTTGTCTTTCCAGAAGTTCATCCCAGCGGTAATATGTTGGTGTTTGTTCTTCTTTGGATTTCACATCTGTTTTCTGGTAG AAGTGAGCACTGTTCACTTGTGCAGTCGTCTTATTTTCCTTCTTCCTAGATGACTCAGCTCTTTGTAAATGTTGTGCTCAACTTCTAGGG GCCAGTTCTAGACTTTGGAGATGCAGTGTCTCCCAGGTGTGCACGGACACCTGGTCCGTGGAAACAGGTGTGATGGGCACAGGCTGCTGC CCTTCTGTCTGGTCGGGGGATTCCTCTTCTTCAAGCTGCTCAGCTAACCCAGAAGAGGGGAGAGAGTACTCCGGTGGTTCCCAGAGCCCC TCCCGTTGTGCCGCTTCGACCTGACACCTGCTCGATGCTGACTTAGGCTTCCTGCCACCAAGCAGGAAACTAGAAAGAGAACATTTCAGT GTAAGGTCTGTTCCCGACAGCATGGATTAGCTTCCGTGTTCTGAAGTTGTTCTTTTCATGGTGTCTGACACCGAGGGCGTTGTTCGTCCA TCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCCTTCTCAGGGACCAAAAATGTATCATTGACTCCTTAACAGTGACCTTCCTCCCAAG GACATATCCGTGTTCATTTTTCATAGGTTTTACTCATATTCATAGGTAGATTCTGTTAATGTGAGTTGGAAAGAAAAGACCAATTTGTAC ACCAGTCACACCACAAGACAGTTTATCATATAAAATACCTCAATTTTTTGTATTCCTCATTTCCACCTCACAATTGTACTGGTGATGAAT TTTAAGGGTCTGTCCTTTAGCTTATAGGTGATGTTTCACATCTGGCCAGATTCTTATACCTCCATTGTATACTTGAAAAGGTTCAGAATT ACAGGAACAGCAGTGAGAATTTGGCCCACTACCACGACTCATTTGTTTCATTCACATTCCTCACGTGCAACAACATAATTATATTTTAAG AAAATGTAACTTTGTTACATCAAAATATGTTGTCTAGTAAAAAGTTGATATTCAGTAGAACAAGGATCATGTAAATAAACATCTATTTCA CATGTACCCAAAAGCATTTAAAAAGCAGAATCCAGGGCCCAGAGCATGAGCCAGGGAGGAGGATGTTTTTCTTCTTTTCTCTATTTTTCC CTAAATTGTGCAAACATAGGTGAGTCTCTTAACCTTTCTGTGCCTCAGTTTTTCTACCTCTAAAGGGGTGGGATGGTTCTTCAAATTGTT TCTAAAACACCGGCACTTTCAGCAGTGTTCTGGTGGCCTGAGATGAGAGCACCGTGTTCAGAAGTGCCTGGGAGTGGCACAGTGGAAACT CCGCTTGCACGGACCATGGAGTCTGCTCAGGACCATGCTGTAGGACACACAGCCTCATGCGCTGAGAAAGCAAAGGAAGTGCTGGGTGTA AAGTTTGCATGATTCCATGAAGCTTTAGTTTTCCTTTTTTTGTTTTAAAAGAAAGGGTTTTATATGTTCTATTGTAAAATATGGAAATTA AACAGGGACTTCAGAAAGCCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGAGGTCTGTATTCTGAAAAA GATTTAATGGCCTGTGAAACACGTGGATTCTGTTGCACTGGATTTGTAATAAATGACGCTGAACTTCCTGCTTCCAAGCAGCTCAACCCT GATGCTGAACTGACACCAGGCGAATGTCAGGGCTCCCAAACCACTAGTGCCAAAGGGTCATGTTGAAAAGTTCAGAATATTTATTTGTCA GAATATAATAATTGCCCCCCACCTTAGTATTTTTGCACTTTACAGAAATTTAGATACTGTTTTTCAGTGGCTTGAGCGTTTTGCCTTTTC AAAGGATAACTATTATTTTCTTGAAAATGGAATATAATCATGAGAGGAAGAAGATGTAAAAAATGTCAAATGTTGATTGGTTGTGTAAAA GTTTTGTCATAGACATGTATTGGGGAGCTTCCAATTAGCATACATAGACACATGTGTCAGTGGCCAAGACCTGCTTATATTTTGCTTTAT AGATGTAGTCATAGCATGTTGTTATTGCCTCATGTAAATAAAAAGGCTATTAAGTTTTCCAGTAATATTTATTAATCTGTATGTGTTTTA >89714_89714_5_TCF12-NIPA1_TCF12_chr15_57213296_ENST00000557843_NIPA1_chr15_23062319_ENST00000337435_length(amino acids)=331AA_BP=61 MDAETGRQKWPKMNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGTSYLTDIVWWAGTIAMAVGQIGNFLAYT AVPTVLVTPLGALGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSPKSESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFW IAPAHGPTNIMVYISICSLLGSFTVPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVFGAIYYVVF -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for TCF12-NIPA1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000267811 | + | 3 | 20 | 182_196 | 49.333333333333336 | 1821.3333333333333 | RUNX1T1 |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000333725 | + | 3 | 21 | 182_196 | 49.333333333333336 | 1420.0 | RUNX1T1 |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000343827 | + | 1 | 13 | 182_196 | 0 | 1254.6666666666667 | RUNX1T1 |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000438423 | + | 3 | 21 | 182_196 | 49.333333333333336 | 1398.3333333333333 | RUNX1T1 |
Hgene | TCF12 | chr15:57213296 | chr15:23062319 | ENST00000557843 | + | 3 | 20 | 182_196 | 49.333333333333336 | 1301.0 | RUNX1T1 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for TCF12-NIPA1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for TCF12-NIPA1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |