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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:TFDP2-XRN1 (FusionGDB2 ID:90310)

Fusion Gene Summary for TFDP2-XRN1

check button Fusion gene summary
Fusion gene informationFusion gene name: TFDP2-XRN1
Fusion gene ID: 90310
HgeneTgene
Gene symbol

TFDP2

XRN1

Gene ID

7029

54464

Gene nametranscription factor Dp-25'-3' exoribonuclease 1
SynonymsDP2SEP1
Cytomap

3q23

3q23

Type of geneprotein-codingprotein-coding
Descriptiontranscription factor Dp-2transcription factor Dp-2 (E2F dimerization partner 2)5'-3' exoribonuclease 1strand-exchange protein 1 homolog
Modification date2020031320200329
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000489671, ENST00000317104, 
ENST00000464782, ENST00000467072, 
ENST00000499676, ENST00000310282, 
ENST00000397991, ENST00000477292, 
ENST00000479040, ENST00000486111, 
ENST00000495310, 		ENST00000463916, 
ENST00000465074, ENST00000544157, 
ENST00000264951, ENST00000392981, 
Fusion gene scores* DoF score13 X 10 X 10=13005 X 7 X 4=140
# samples 188
** MAII scorelog2(18/1300*10)=-2.85244281158614
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(8/140*10)=-0.807354922057604
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: TFDP2 [Title/Abstract] AND XRN1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointTFDP2(141820576)-XRN1(142084208), # samples:4
Anticipated loss of major functional domain due to fusion event.TFDP2-XRN1 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
TFDP2-XRN1 seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF.
TFDP2-XRN1 seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF.
TFDP2-XRN1 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneTFDP2

GO:0045892

negative regulation of transcription, DNA-templated

20176812

HgeneTFDP2

GO:0045944

positive regulation of transcription by RNA polymerase II

7739537


check buttonFusion gene breakpoints across TFDP2 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across XRN1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4COADTCGA-D5-6928-01ATFDP2chr3

141820577

-XRN1chr3

142084208

-
ChimerDB4ESCATCGA-2H-A9GFTFDP2chr3

141820576

-XRN1chr3

142084208

-
ChimerDB4ESCATCGA-2H-A9GJTFDP2chr3

141820576

-XRN1chr3

142103527

-
ChimerDB4ESCATCGA-2H-A9GNTFDP2chr3

141868024

-XRN1chr3

142145683

-
ChimerDB4PRADTCGA-EJ-5525TFDP2chr3

141820576

-XRN1chr3

142084208

-


Top

Fusion Gene ORF analysis for TFDP2-XRN1

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-intronENST00000489671ENST00000463916TFDP2chr3

141820577

-XRN1chr3

142084208

-
5CDS-intronENST00000489671ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142084208

-
5CDS-intronENST00000489671ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142103527

-
5CDS-intronENST00000489671ENST00000465074TFDP2chr3

141820577

-XRN1chr3

142084208

-
5CDS-intronENST00000489671ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142084208

-
5CDS-intronENST00000489671ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142103527

-
5CDS-intronENST00000489671ENST00000544157TFDP2chr3

141820577

-XRN1chr3

142084208

-
5CDS-intronENST00000489671ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142084208

-
5CDS-intronENST00000489671ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-3CDSENST00000317104ENST00000264951TFDP2chr3

141820577

-XRN1chr3

142084208

-
5UTR-3CDSENST00000317104ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142084208

-
5UTR-3CDSENST00000317104ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-3CDSENST00000317104ENST00000264951TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-3CDSENST00000317104ENST00000392981TFDP2chr3

141820577

-XRN1chr3

142084208

-
5UTR-3CDSENST00000317104ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142084208

-
5UTR-3CDSENST00000317104ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-3CDSENST00000317104ENST00000392981TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-3CDSENST00000317104ENST00000463916TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-3CDSENST00000464782ENST00000264951TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-3CDSENST00000464782ENST00000392981TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-3CDSENST00000464782ENST00000463916TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-3CDSENST00000467072ENST00000264951TFDP2chr3

141820577

-XRN1chr3

142084208

-
5UTR-3CDSENST00000467072ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142084208

-
5UTR-3CDSENST00000467072ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-3CDSENST00000467072ENST00000264951TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-3CDSENST00000467072ENST00000392981TFDP2chr3

141820577

-XRN1chr3

142084208

-
5UTR-3CDSENST00000467072ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142084208

-
5UTR-3CDSENST00000467072ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-3CDSENST00000467072ENST00000392981TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-3CDSENST00000467072ENST00000463916TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-3CDSENST00000489671ENST00000264951TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-3CDSENST00000489671ENST00000392981TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-3CDSENST00000489671ENST00000463916TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-3CDSENST00000499676ENST00000264951TFDP2chr3

141820577

-XRN1chr3

142084208

-
5UTR-3CDSENST00000499676ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142084208

-
5UTR-3CDSENST00000499676ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-3CDSENST00000499676ENST00000264951TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-3CDSENST00000499676ENST00000392981TFDP2chr3

141820577

-XRN1chr3

142084208

-
5UTR-3CDSENST00000499676ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142084208

-
5UTR-3CDSENST00000499676ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-3CDSENST00000499676ENST00000392981TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-3CDSENST00000499676ENST00000463916TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-intronENST00000317104ENST00000463916TFDP2chr3

141820577

-XRN1chr3

142084208

-
5UTR-intronENST00000317104ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142084208

-
5UTR-intronENST00000317104ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-intronENST00000317104ENST00000465074TFDP2chr3

141820577

-XRN1chr3

142084208

-
5UTR-intronENST00000317104ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142084208

-
5UTR-intronENST00000317104ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-intronENST00000317104ENST00000465074TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-intronENST00000317104ENST00000544157TFDP2chr3

141820577

-XRN1chr3

142084208

-
5UTR-intronENST00000317104ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142084208

-
5UTR-intronENST00000317104ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-intronENST00000317104ENST00000544157TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-intronENST00000464782ENST00000465074TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-intronENST00000464782ENST00000544157TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-intronENST00000467072ENST00000463916TFDP2chr3

141820577

-XRN1chr3

142084208

-
5UTR-intronENST00000467072ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142084208

-
5UTR-intronENST00000467072ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-intronENST00000467072ENST00000465074TFDP2chr3

141820577

-XRN1chr3

142084208

-
5UTR-intronENST00000467072ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142084208

-
5UTR-intronENST00000467072ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-intronENST00000467072ENST00000465074TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-intronENST00000467072ENST00000544157TFDP2chr3

141820577

-XRN1chr3

142084208

-
5UTR-intronENST00000467072ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142084208

-
5UTR-intronENST00000467072ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-intronENST00000467072ENST00000544157TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-intronENST00000489671ENST00000465074TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-intronENST00000489671ENST00000544157TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-intronENST00000499676ENST00000463916TFDP2chr3

141820577

-XRN1chr3

142084208

-
5UTR-intronENST00000499676ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142084208

-
5UTR-intronENST00000499676ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-intronENST00000499676ENST00000465074TFDP2chr3

141820577

-XRN1chr3

142084208

-
5UTR-intronENST00000499676ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142084208

-
5UTR-intronENST00000499676ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-intronENST00000499676ENST00000465074TFDP2chr3

141868024

-XRN1chr3

142145683

-
5UTR-intronENST00000499676ENST00000544157TFDP2chr3

141820577

-XRN1chr3

142084208

-
5UTR-intronENST00000499676ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142084208

-
5UTR-intronENST00000499676ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142103527

-
5UTR-intronENST00000499676ENST00000544157TFDP2chr3

141868024

-XRN1chr3

142145683

-
Frame-shiftENST00000489671ENST00000264951TFDP2chr3

141820577

-XRN1chr3

142084208

-
Frame-shiftENST00000489671ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142084208

-
Frame-shiftENST00000489671ENST00000392981TFDP2chr3

141820577

-XRN1chr3

142084208

-
Frame-shiftENST00000489671ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142084208

-
In-frameENST00000489671ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142103527

-
In-frameENST00000489671ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-3CDSENST00000310282ENST00000264951TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-3CDSENST00000310282ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-3CDSENST00000310282ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-3CDSENST00000310282ENST00000264951TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000310282ENST00000392981TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-3CDSENST00000310282ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-3CDSENST00000310282ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-3CDSENST00000310282ENST00000392981TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000310282ENST00000463916TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000397991ENST00000264951TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-3CDSENST00000397991ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-3CDSENST00000397991ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-3CDSENST00000397991ENST00000264951TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000397991ENST00000392981TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-3CDSENST00000397991ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-3CDSENST00000397991ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-3CDSENST00000397991ENST00000392981TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000397991ENST00000463916TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000464782ENST00000264951TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-3CDSENST00000464782ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-3CDSENST00000464782ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-3CDSENST00000464782ENST00000392981TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-3CDSENST00000464782ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-3CDSENST00000464782ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-3CDSENST00000477292ENST00000264951TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-3CDSENST00000477292ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-3CDSENST00000477292ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-3CDSENST00000477292ENST00000264951TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000477292ENST00000392981TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-3CDSENST00000477292ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-3CDSENST00000477292ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-3CDSENST00000477292ENST00000392981TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000477292ENST00000463916TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000479040ENST00000264951TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-3CDSENST00000479040ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-3CDSENST00000479040ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-3CDSENST00000479040ENST00000264951TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000479040ENST00000392981TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-3CDSENST00000479040ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-3CDSENST00000479040ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-3CDSENST00000479040ENST00000392981TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000479040ENST00000463916TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000486111ENST00000264951TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-3CDSENST00000486111ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-3CDSENST00000486111ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-3CDSENST00000486111ENST00000264951TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000486111ENST00000392981TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-3CDSENST00000486111ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-3CDSENST00000486111ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-3CDSENST00000486111ENST00000392981TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000486111ENST00000463916TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000495310ENST00000264951TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-3CDSENST00000495310ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-3CDSENST00000495310ENST00000264951TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-3CDSENST00000495310ENST00000264951TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000495310ENST00000392981TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-3CDSENST00000495310ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-3CDSENST00000495310ENST00000392981TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-3CDSENST00000495310ENST00000392981TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-3CDSENST00000495310ENST00000463916TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-intronENST00000310282ENST00000463916TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000310282ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000310282ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000310282ENST00000465074TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000310282ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000310282ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000310282ENST00000465074TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-intronENST00000310282ENST00000544157TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000310282ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000310282ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000310282ENST00000544157TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-intronENST00000397991ENST00000463916TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000397991ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000397991ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000397991ENST00000465074TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000397991ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000397991ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000397991ENST00000465074TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-intronENST00000397991ENST00000544157TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000397991ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000397991ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000397991ENST00000544157TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-intronENST00000464782ENST00000463916TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000464782ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000464782ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000464782ENST00000465074TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000464782ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000464782ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000464782ENST00000544157TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000464782ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000464782ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000477292ENST00000463916TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000477292ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000477292ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000477292ENST00000465074TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000477292ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000477292ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000477292ENST00000465074TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-intronENST00000477292ENST00000544157TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000477292ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000477292ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000477292ENST00000544157TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-intronENST00000479040ENST00000463916TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000479040ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000479040ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000479040ENST00000465074TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000479040ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000479040ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000479040ENST00000465074TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-intronENST00000479040ENST00000544157TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000479040ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000479040ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000479040ENST00000544157TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-intronENST00000486111ENST00000463916TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000486111ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000486111ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000486111ENST00000465074TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000486111ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000486111ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000486111ENST00000465074TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-intronENST00000486111ENST00000544157TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000486111ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000486111ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000486111ENST00000544157TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-intronENST00000495310ENST00000463916TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000495310ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000495310ENST00000463916TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000495310ENST00000465074TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000495310ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000495310ENST00000465074TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000495310ENST00000465074TFDP2chr3

141868024

-XRN1chr3

142145683

-
intron-intronENST00000495310ENST00000544157TFDP2chr3

141820577

-XRN1chr3

142084208

-
intron-intronENST00000495310ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142084208

-
intron-intronENST00000495310ENST00000544157TFDP2chr3

141820576

-XRN1chr3

142103527

-
intron-intronENST00000495310ENST00000544157TFDP2chr3

141868024

-XRN1chr3

142145683

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000489671TFDP2chr3141820576-ENST00000264951XRN1chr3142103527-81324464503227925
ENST00000489671TFDP2chr3141820576-ENST00000392981XRN1chr3142103527-34424464503191913

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000489671ENST00000264951TFDP2chr3141820576-XRN1chr3142103527-0.0001656180.9998343
ENST00000489671ENST00000392981TFDP2chr3141820576-XRN1chr3142103527-0.0003125020.99968755

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Fusion Genomic Features for TFDP2-XRN1


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for TFDP2-XRN1


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr3:141820576/chr3:142084208)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTFDP2chr3:141820576chr3:142103527ENST00000310282-110432_4460387.0Compositional biasNote=Asp/Glu-rich (acidic%3B NCB domain)
HgeneTFDP2chr3:141820576chr3:142103527ENST00000397991-110432_4460419.0Compositional biasNote=Asp/Glu-rich (acidic%3B NCB domain)
HgeneTFDP2chr3:141820576chr3:142103527ENST00000467072-214432_4460387.0Compositional biasNote=Asp/Glu-rich (acidic%3B NCB domain)
HgeneTFDP2chr3:141820576chr3:142103527ENST00000477292-18432_4460311.0Compositional biasNote=Asp/Glu-rich (acidic%3B NCB domain)
HgeneTFDP2chr3:141820576chr3:142103527ENST00000479040-110432_4460386.0Compositional biasNote=Asp/Glu-rich (acidic%3B NCB domain)
HgeneTFDP2chr3:141820576chr3:142103527ENST00000486111-111432_4460387.0Compositional biasNote=Asp/Glu-rich (acidic%3B NCB domain)
HgeneTFDP2chr3:141820576chr3:142103527ENST00000489671-213432_4465447.0Compositional biasNote=Asp/Glu-rich (acidic%3B NCB domain)
HgeneTFDP2chr3:141820576chr3:142103527ENST00000495310-110432_4460350.0Compositional biasNote=Asp/Glu-rich (acidic%3B NCB domain)
HgeneTFDP2chr3:141820576chr3:142103527ENST00000499676-213432_4460387.0Compositional biasNote=Asp/Glu-rich (acidic%3B NCB domain)
HgeneTFDP2chr3:141820576chr3:142103527ENST00000310282-110129_2100387.0DNA bindingOntology_term=ECO:0000255
HgeneTFDP2chr3:141820576chr3:142103527ENST00000397991-110129_2100419.0DNA bindingOntology_term=ECO:0000255
HgeneTFDP2chr3:141820576chr3:142103527ENST00000467072-214129_2100387.0DNA bindingOntology_term=ECO:0000255
HgeneTFDP2chr3:141820576chr3:142103527ENST00000477292-18129_2100311.0DNA bindingOntology_term=ECO:0000255
HgeneTFDP2chr3:141820576chr3:142103527ENST00000479040-110129_2100386.0DNA bindingOntology_term=ECO:0000255
HgeneTFDP2chr3:141820576chr3:142103527ENST00000486111-111129_2100387.0DNA bindingOntology_term=ECO:0000255
HgeneTFDP2chr3:141820576chr3:142103527ENST00000489671-213129_2105447.0DNA bindingOntology_term=ECO:0000255
HgeneTFDP2chr3:141820576chr3:142103527ENST00000495310-110129_2100350.0DNA bindingOntology_term=ECO:0000255
HgeneTFDP2chr3:141820576chr3:142103527ENST00000499676-213129_2100387.0DNA bindingOntology_term=ECO:0000255
HgeneTFDP2chr3:141820576chr3:142103527ENST00000310282-110176_2100387.0MotifNote=DEF box
HgeneTFDP2chr3:141820576chr3:142103527ENST00000397991-110176_2100419.0MotifNote=DEF box
HgeneTFDP2chr3:141820576chr3:142103527ENST00000467072-214176_2100387.0MotifNote=DEF box
HgeneTFDP2chr3:141820576chr3:142103527ENST00000477292-18176_2100311.0MotifNote=DEF box
HgeneTFDP2chr3:141820576chr3:142103527ENST00000479040-110176_2100386.0MotifNote=DEF box
HgeneTFDP2chr3:141820576chr3:142103527ENST00000486111-111176_2100387.0MotifNote=DEF box
HgeneTFDP2chr3:141820576chr3:142103527ENST00000489671-213176_2105447.0MotifNote=DEF box
HgeneTFDP2chr3:141820576chr3:142103527ENST00000495310-110176_2100350.0MotifNote=DEF box
HgeneTFDP2chr3:141820576chr3:142103527ENST00000499676-213176_2100387.0MotifNote=DEF box
HgeneTFDP2chr3:141820576chr3:142103527ENST00000310282-110219_2920387.0RegionDimerization
HgeneTFDP2chr3:141820576chr3:142103527ENST00000310282-110229_2610387.0RegionNote=DCB1
HgeneTFDP2chr3:141820576chr3:142103527ENST00000310282-110274_3300387.0RegionNote=DCB2
HgeneTFDP2chr3:141820576chr3:142103527ENST00000397991-110219_2920419.0RegionDimerization
HgeneTFDP2chr3:141820576chr3:142103527ENST00000397991-110229_2610419.0RegionNote=DCB1
HgeneTFDP2chr3:141820576chr3:142103527ENST00000397991-110274_3300419.0RegionNote=DCB2
HgeneTFDP2chr3:141820576chr3:142103527ENST00000467072-214219_2920387.0RegionDimerization
HgeneTFDP2chr3:141820576chr3:142103527ENST00000467072-214229_2610387.0RegionNote=DCB1
HgeneTFDP2chr3:141820576chr3:142103527ENST00000467072-214274_3300387.0RegionNote=DCB2
HgeneTFDP2chr3:141820576chr3:142103527ENST00000477292-18219_2920311.0RegionDimerization
HgeneTFDP2chr3:141820576chr3:142103527ENST00000477292-18229_2610311.0RegionNote=DCB1
HgeneTFDP2chr3:141820576chr3:142103527ENST00000477292-18274_3300311.0RegionNote=DCB2
HgeneTFDP2chr3:141820576chr3:142103527ENST00000479040-110219_2920386.0RegionDimerization
HgeneTFDP2chr3:141820576chr3:142103527ENST00000479040-110229_2610386.0RegionNote=DCB1
HgeneTFDP2chr3:141820576chr3:142103527ENST00000479040-110274_3300386.0RegionNote=DCB2
HgeneTFDP2chr3:141820576chr3:142103527ENST00000486111-111219_2920387.0RegionDimerization
HgeneTFDP2chr3:141820576chr3:142103527ENST00000486111-111229_2610387.0RegionNote=DCB1
HgeneTFDP2chr3:141820576chr3:142103527ENST00000486111-111274_3300387.0RegionNote=DCB2
HgeneTFDP2chr3:141820576chr3:142103527ENST00000489671-213219_2925447.0RegionDimerization
HgeneTFDP2chr3:141820576chr3:142103527ENST00000489671-213229_2615447.0RegionNote=DCB1
HgeneTFDP2chr3:141820576chr3:142103527ENST00000489671-213274_3305447.0RegionNote=DCB2
HgeneTFDP2chr3:141820576chr3:142103527ENST00000495310-110219_2920350.0RegionDimerization
HgeneTFDP2chr3:141820576chr3:142103527ENST00000495310-110229_2610350.0RegionNote=DCB1
HgeneTFDP2chr3:141820576chr3:142103527ENST00000495310-110274_3300350.0RegionNote=DCB2
HgeneTFDP2chr3:141820576chr3:142103527ENST00000499676-213219_2920387.0RegionDimerization
HgeneTFDP2chr3:141820576chr3:142103527ENST00000499676-213229_2610387.0RegionNote=DCB1
HgeneTFDP2chr3:141820576chr3:142103527ENST00000499676-213274_3300387.0RegionNote=DCB2


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Fusion Gene Sequence for TFDP2-XRN1


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>90310_90310_1_TFDP2-XRN1_TFDP2_chr3_141820576_ENST00000489671_XRN1_chr3_142103527_ENST00000264951_length(transcript)=8132nt_BP=446nt
AAAGCTCGCGCGGGGGAAGCGGGGCTGTAGCTGGGCAGGGAGAGGGCGGACGAAATCGGTAGCGATCTCGGCTGCGGCGCTGCCGCAGCT
GCCCGGCCCGCGGGGCGCGCCCTGACCCTTCATCTTTGGGCAGGCTCGAGGGCGCGCGCACGGTTGGCGTTCTGGGGCCTCAAACTCCTG
GGCCTTGACCGGGCAGGCCGCGTCTCCCCGGGTGTGAGTCCACCGGGACCCGGCCGCCGCCTAAGCGCGGGCGCCACAGAAGCGGCGGCG
CCCGAAGACGCGCTCCTGGCTCGGCCCGACAGCCTCGCTTGGCCGCCAGTTCTTCTGCAGCCGAAGGCGGTTGTTCTTTTAAAGAATTAT
TGAAGACGAAGGTTTTTTTCTTTTTATTTTTTTAATGGCTTTACAGAATCTTAAATAGAATACAGTTTGACATGACGGCAAAAAATCTAC
CTGAGAAGAAAAGGAATAATAATAAATGAAACATCTGCAGTTGTGTATGCTCAGTTACTCACAGGTCGTAAATATCAAATAAATCAAAAT
GGTGAAGTTCGTCTAGAGAAACAGTGGTCAAAACAAGTTGTTCCTTTTGTTTATCAAACTATTGTCAAGGACATCCGAGCTTTCGACTCC
CGTTTCTCCAATATCAAAACATTGGATGATTTGTTTCCTCTGAGAAGTATGGTCTTTATGCTGGGAACTCCCTATTATGGCTGCACTGGA
GAAGTTCAGGATTCAGGTGATGTGATTACAGAAGGTAGGATTCGTGTGATTTTCAGCATTCCATGTGAACCCAATCTTGATGCTTTAATA
CAGAACCAGCATAAATATTCTATAAAGTACAACCCAGGATATGTGTTGGCCAGTCGCCTTGGAGTGAGTGGATACCTTGTTTCAAGGTTT
ACAGGAAGTATTTTTATTGGAAGAGGATCTAGGAGAAACCCTCATGGAGACCATAAAGCAAATGTGGGTTTAAATCTCAAATTCAACAAG
AAAAATGAGGAGGTACCTGGATATACTAAGAAAGTTGGAAGTGAATGGATGTATTCATCTGCAGCAGAACAACTTCTGGCAGAGTACTTA
GAGAGAGCTCCAGAACTATTTAGTTATATAGCCAAAAATAGCCAAGAGGATGTGTTCTATGAAGATGACATTTGGCCTGGAGAAAATGAG
AATGGTGCTGAAAAAGTTCAAGAAATTATTACTTGGCTAAAAGGACATCCTGTCAGTACTTTATCTCGTTCTTCTTGTGATTTACAAATT
CTGGATGCAGCTATTGTTGAGAAAATTGAGGAAGAAGTCGAAAAGTGCAAGCAAAGAAAGAATAATAAGAAGGTGCGAGTAACAGTGAAA
CCCCATTTGCTATACAGACCTTTAGAACAGCAACATGGAGTCATTCCTGATCGGGATGCAGAATTTTGTCTTTTTGACCGTGTTGTAAAT
GTGAGAGAAAACTTCTCAGTTCCAGTTGGCCTTCGAGGCACCATCATAGGAATAAAAGGAGCTAATAGAGAAGCCGATGTACTATTTGAA
GTATTATTTGATGAAGAATTTCCTGGAGGGTTAACAATAAGATGCTCACCTGGTAGAGGTTATCGACTGCCAACAAGTGCCTTGGTGAAC
CTTTCTCATGGGAGTCGCTCTGAAACTGGAAATCAGAAGTTGACAGCCATCGTAAAACCACAACCAGCTGTACATCAACATAGCTCAAGT
TCATCAGTTTCCTCTGGGCATTTGGGAGCCCTCAACCATTCCCCTCAATCACTTTTTGTTCCTACTCAAGTACCTACTAAAGATGATGAT
GAATTCTGCAACATTTGGCAGTCCTTACAGGGATCTGGAAAGATGCAATACTTTCAGCCAACTATACAAGAGAAGGGTGCAGTTCTACCT
CAAGAAATAAGCCAAGTAAATCAACATCATAAATCTGGCTTTAATGACAACAGTGTTAAATATCAGCAAAGAAAACATGACCCTCACAGA
AAATTTAAAGAAGAGTGTAAGAGTCCTAAAGCTGAGTGTTGGTCCCAAAAAATGTCCAATAAGCAGCCTAACTCTGGAATTGAGAACTTT
TTAGCATCTTTGAATATCTCCAAAGAAAATGAAGTACAGTCATCTCATCATGGGGAGCCTCCAAGTGAAGAGCATTTGTCACCACAGTCA
TTTGCCATGGGAACACGGATGCTTAAAGAAATTCTAAAAATTGATGGCTCTAACACTGTGGACCATAAGAATGAAATCAAACAGATTGCT
AATGAAATCCCTGTTTCCTCTAACAGAAGAGATGAATATGGATTACCCTCTCAGCCTAAACAAAATAAGAAATTAGCATCTTATATGAAC
AAGCCTCACAGTGCTAATGAGTACCATAATGTTCAGTCTATGGACAATATGTGTTGGCCTGCCCCCAGCCAGATCCCTCCTGTATCCACA
CCAGTAACTGAACTTTCTCGAATTTGTTCCCTTGTTGGAATGCCACAACCTGATTTCTCCTTTCTTAGGATGCCACAGACAATGACCGTT
TGCCAAGTAAAATTATCTAATGGCTTACTGGTACATGGGCCACAGTGCCACTCTGAAAATGAAGCCAAAGAGAAAGCTGCACTTTTTGCT
TTACAACAGTTGGGCTCCTTAGGCATGAATTTCCCTTTGCCTTCACAAGTATTTGCAAATTATCCTTCAGCTGTACCACCTGGAACCATT
CCTCCAGCCTTTCCCCCACCTACTGGCTGGGATCACTATGGAAGCAACTATGCATTGGGGGCAGCTAATATAATGCCTTCGTCGTCTCAT
CTCTTTGGCTCAATGCCATGGGGACCATCGGTGCCAGTTCCTGGGAAGCCCTTCCATCATACTTTATATTCTGGGACCATGCCCATGGCT
GGGGGAATACCAGGGGGTGTGCACAATCAGTTTATACCTCTGCAGGTTACTAAAAAAAGGGTTGCAAACAAAAAGAACTTTGAGAATAAG
GAAGCCCAGAGTTCTCAAGCCACTCCAGTTCAGACTAGCCAGCCAGATTCTTCCAACATTGTCAAAGTAAGTCCACGGGAGAGCTCATCA
GCTTCTTTGAAGTCCTCTCCGATTGCTCAACCTGCATCTTCTTTTCAAGTTGAAACTGCCTCTCAAGGCCATAGTATATCTCACCATAAG
TCAACACCAATCTCTTCTTCAAGAAGAAAATCAAGAAAACTGGCTGTTAATTTTGGTGTTTCTAAACCTTCTGAGTAAATTTGGCTCTTA
GAATTAAGTTAATTTCTTCTCTTTCCATCTACCTTTTTATAAATACATATCTATGTCTCATAAAAATTAGAATGTACTATTTTAAAATAA
TATGTGTAAATTGAAATTTTTTTCATTTTTAAGTTATCAGGCACTTTTCATGCTGTTTAAAAGACTGTGTATCAAATTGTGCACTTTAAG
TATGTGCAGTTTGTTGTATGTCAATTATACCTCAATAAATCTGTAATAAAAAACTAAATTAAACCTTGCATTAAAATAATATCACAGTAT
CAGTGGACTAAACATTAAAATGTACCACTCTAATCATTGGCCTCATGATTGAAGCATCCTGAACTATGAATTAGACATCAGTTAGCAATA
ATAAGCATTTTTTACACTATCATTGAGGAATAATTACATGGAGCATGAAATTTGGGCCTCCAGTATAACTTACTGAATGTGGATTTTATT
TCTCTTTTTAATGATGTAAGAAAATTGTCAGGAGAATGGCTCTTATTTATGTGTGTTTTAACTTATGCTTTGTTGCCTCTGAGGGTCTTT
AGACCTGCTGTGAAAGGATCACATTTGTTGTGGTGCTGCCAGTTTTGCTTTATTCTAAATTTTGTACCAAAGCAACTTTAGAATAATCAG
AATATTTCATCTAACTGCTTAGAACTATAAATAGCATTCTAAATTTGAGTAAATACAATTTTTTAGGTTACTCAAGAACCAGCATTAGTA
ATTTCTAGTAAAATTGTTTCAAAATCTACAGGGTACAATGATTACAAATTAATCTTCTAACAAAATAAAATATGAAATATTAGTCATGTT
AATTAATAAACTGTATTATTTTGTATAGCTTTTTATTTGCTTACCTGACATTTTATGAGAGCTTCATAGTTGGTCGGTATGTAGTGCTTC
TTGGGACTGAAGAAATTCTAATTGTTGTTTAAGTTCCAAGGTGTGCTACAATATAGGAGGCACAGTCATCAGTTTGTGACATACATTATT
TACTGCCTATTTCATTCTGATTCTATATTTTTAGCTTTATGCTGAACTGTTCAATGATGCTGGGATTCTCTCTTTGCATGTCATATGTGA
ATGTGTGGTTCAAGCTGTAACTGTTGAAATTATTTTAGAATTTATGACGATTTCTCAGCAGGGCCTATGTTTATATATATATATATATTT
ATTCTTTAGTTTTTGTGATATGCTTATATTTTTAAGGAAGTAAGTTATAGCATACTTTTTTAAAAGTAGGAACCACAATCTTTATATGGA
GCAGCTTGTTATATCTGATTTTCATGTAACTCATTGGAAACTCTGCCATGACTCTTAAAGTAGTCTTACTTGTTTTTTAAAATGCTGGTA
TTAAACTAAATGGACTCCTTTCACTAACTGCTGATTTCAGAGTTTAAATGTTAGCAGGATATTTGTGTATTAGCAGTGCCTTCAGTATAA
GAGAGAAATATTCATTATCTGTCATTTATCATAGTCGTATAAGTTTCCATGATTTTATTTTCTGTTATTTTCATAAGTTCAGATGTTTAT
CAGTTCCCAACATTGTTTCTTTATCTGTAGTGGGATCTTGAGTAATGAGGCTCAAGTAAATCCTCAATGTGTATAATTATTGCCTCATAA
ACTCTCTCTTTGTTTTTAAAGGAAACATCTATTATGGTAATACAAAGAAAAGTTAAATTGTGACAGTAATGTTATATTAACCTCTTCCTA
CTTTAAAGTGTGAAATGTTTCACCTCAGCTGTACAAACTCCAGCATTGAGAATTTGCCTCACTCATTACTCCTGTGTGACAGTTATATAA
ATAGCATGCAGCTCACATCTGTTTTAGAGCATAGAAGAAGCGGCACCTGCCATCTTCTGAAAACTCCAAAGGGAAATTTCAGTAGACATA
GTGCACTAAACCCATAAGGATACTTGACCAATATTTGAGCACAGCAAGCTGACAGTTCTATACAGATAGGCAGTGAAAGAGTTTTATTTT
CCAGCCAGGCGCAGTGGCTCAAATCCCAGCACTTCGGGAGGCTAAGGCAGGCGGATCACTTGAGGTCCGGAGTTCCAGACAAGCCTGGCC
AACATGATGAAGCCCTGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGATGGCACATGCCTTTAGTCCCAGCTACTCGGGAGGCTGA
GGCATGAGAATCATTTGAACCCGCGAGGCAGAGTCTGCAGTGAGCCGAGATTGCACCACTGCACTCCAGCCTGGAGAGCAGAGCAAGACT
CTGTCTCAAAAAAAAGAAAAAAGTTTTATTATCCTTACTTTTTTTTTAACATTATTATTCTAAAGGTCAAAACTGAGAAGAGATTAAGAT
AGGAGAGAGCTCCATAATGGCTGGATAGTGGTCAGGCATTCTCTATTCTTTTCCCCCTGTAGACCCATTCTAAATGTGGGCCTGAGGTCA
ATGGGAGATGTGCCCTCCCTATGGAGGATGTAAGAAGCAGAGGCCATTTCTGCCCCATGTTGAGGAAACAATCTGTTGATAGACCTGGAA
TTTAGAGTATATCTGAAAAGCAGTTGGACTTCAAGAAATTTAAAATTCTCTCTTTGAGATGGGGTGGACTAAGACCACCCCCAAAGTTTA
AAAATATGCTCATTCAACTTGAATCTTCTGAGGACTTTTTGTGAAAATGGTGGACTGTTTAGGGCATAGGACAGATTCCCCAAATTGCTT
TATGCTTCCACATAACTAGAGCACTTCAATCTATTTAAGCCTTTGTCTCCTAACTGAAACATTATTTCTAAATATTTCTATTCAATAAGT
TTTTTCTTTTTTGAGCAACTTAAGTGAATTTTGAAGATTGCTCCTTCCAGTCTCGTTCCTTTTCACATTTTCCTGCATTACCTAATAATT
ACCTCAGCGTTAGAATTTGAATGTATTAATTGATTTAAACATCATGTAGACTAAAGTCTTAAACATCTAAGACTCAGTTGTAGTTGCAGA
AAAAAATTAAAGTCACCTCTACTGAACCTTGGTTTCAATTTAAGATTTTTCTTGCTTTTCAAAGGGGTAACTAATAAAGATTGAAGGGTT
TTTTTCCCGATTGGTGGAGGAATGAAGAACTATTGATGCAAGTTTTTTTATTGTTTCTTTCTATGATCAGGTACCTGCTTTCATTTTAGA
CTGCTACTTCCAAACTAAGCTAGATTCTTGGTTTTAATGAGAGGAGGCAGAGAGAGGGAGGCAGATGGAAGAAGAAAAACAGTTAAATAA
GACATACCCAGTCACTGCATTTTTGGACTATACCGTATCTTTCTAGCACAAGGAAATAGATAAACTGTAAGGTCTTTTTTACTCACTTTT
TATTTATGTGTTCTATTTGTGTTAGTCATAACTGTTTATAGTGGTTGTCTAATTTTTACTTTTATTATATGAGATAGAGCTGTGCAGATC
TTCACTCAAGTTAGTTCTGTCACGCTTCTTCCCATTATTTAGAGCACAGTTTTTTAAAGCAACTGTACAATTTCTCAGCCTTATGAGCTT
GCTGTATTTCTTGGTATCATGTTGCTTCCAAATTTTGTTTTTACTGTAGAAGACAATTAATTTATTGTAGAGAAGTGGCTGTGAAAGTCG
TTCTCTGTCTTTAAAAATCAATTGCAGAAGTTCATTTGTCATTTTTCTAGAGATAAATTATAGTACTCAAACTGGCAGTGCTCAGTATAT
ACATTTTGTAAGCTTTGTCAGTGAAACCATCAGTTTTGCAGGAGCTTCCTTTCCTAGTCAAGATAAAGCTTAAAATTCCAGAAATTAATG
TCGTTCGGACTGACTTTATTCATATTTCCATCAAACTTCTCCAATACAGTAAGAGATAGTGTTGAACCAGCATCAAGTCTCCAGAAACAT
GGCAGAGCAGACAGGCCGTTAAGTTTCACAGACATCATAGATCCTTTTCTTAAAGAAGAAAAACATGTATAAAATAGTTTTAGTAGTCCA
AAATGTCAACTATCTGTAGCTGCTTTTGTGTGTGTGTCAGTGAACAAATAATAATGCCTTGCTCAATCAATGCATTCAGCCATCTCAAGT
GCAATTTGTGAAGGAGACTATGGTTTCCAAAAGATACATTTTTTTACAAAGTTAAACCTGTAAAAAGTCTTTTTTTTTTTCCCTCCAGCC
GTACACCAACTGCACTTGGTTGTTTCAGCAGTTGGTATACTATTAAATTGTCCAGGCCAAATAGGTTTCTGTAGCTGTTTTAGTAATTTG
AAGCCAAATTCTCATGCTGTTTCTCATTAAAAAGAATGAGAATTTGGTCCATAGTTAGCTTTAAGTTCTCTCTTCCTTTCTTTCCCTTAC
AGTTAAGGGTTTGGTGGGGGATGGGGAGGTTGTTTTCGTTTTTTGGATTTTTTTGTCTTTTGGCTTTAAGTATCATATTTTCTTTTGCCT
GTATCCAACTGCTTCTTTGAGTATTTTCATCTAGTTTAATGTGAGTAATAGATGCTGTGCTGTCATTGAAGTGTTCAACATTTTGTTCAT
TTAAACAAAAGTGTAATTCATACATATATAGATACATATCTTAATTGATTTCTCAACTATTTTATAAGTAACTGGAATTTTTCATTAGAT
CTTATACAGAGAAGTATTTTATTAAAAATTCAAAAGGGAAGACTTTTATGTGCTCATTTTGTAATTTTTGATTTTAAATATCTTTACATT
GTCTGCCAATTAAAGTGTTTTAAACTTGCATTGGAATGGACTCCGAATGTATTTTTGTGGTGTTACGTTATCCGTAGATTTCTAGCATGA
AGTTAGCCTCACGATGCTGTGCAAAGGATTTTAAAATATGAGAGTCACTGAAAGAGTTTAAACATCTGTTCATGTTAAATGCTCTATGGA

>90310_90310_1_TFDP2-XRN1_TFDP2_chr3_141820576_ENST00000489671_XRN1_chr3_142103527_ENST00000264951_length(amino acids)=925AA_BP=1
MRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQVVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTG
EVQDSGDVITEGRIRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFNK
KNEEVPGYTKKVGSEWMYSSAAEQLLAEYLERAPELFSYIAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQI
LDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPVGLRGTIIGIKGANREADVLFE
VLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSRSETGNQKLTAIVKPQPAVHQHSSSSSVSSGHLGALNHSPQSLFVPTQVPTKDDD
EFCNIWQSLQGSGKMQYFQPTIQEKGAVLPQEISQVNQHHKSGFNDNSVKYQQRKHDPHRKFKEECKSPKAECWSQKMSNKQPNSGIENF
LASLNISKENEVQSSHHGEPPSEEHLSPQSFAMGTRMLKEILKIDGSNTVDHKNEIKQIANEIPVSSNRRDEYGLPSQPKQNKKLASYMN
KPHSANEYHNVQSMDNMCWPAPSQIPPVSTPVTELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQCHSENEAKEKAALFA
LQQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPTGWDHYGSNYALGAANIMPSSSHLFGSMPWGPSVPVPGKPFHHTLYSGTMPMA
GGIPGGVHNQFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRESSSASLKSSPIAQPASSFQVETASQGHSISHHK

--------------------------------------------------------------
>90310_90310_2_TFDP2-XRN1_TFDP2_chr3_141820576_ENST00000489671_XRN1_chr3_142103527_ENST00000392981_length(transcript)=3442nt_BP=446nt
AAAGCTCGCGCGGGGGAAGCGGGGCTGTAGCTGGGCAGGGAGAGGGCGGACGAAATCGGTAGCGATCTCGGCTGCGGCGCTGCCGCAGCT
GCCCGGCCCGCGGGGCGCGCCCTGACCCTTCATCTTTGGGCAGGCTCGAGGGCGCGCGCACGGTTGGCGTTCTGGGGCCTCAAACTCCTG
GGCCTTGACCGGGCAGGCCGCGTCTCCCCGGGTGTGAGTCCACCGGGACCCGGCCGCCGCCTAAGCGCGGGCGCCACAGAAGCGGCGGCG
CCCGAAGACGCGCTCCTGGCTCGGCCCGACAGCCTCGCTTGGCCGCCAGTTCTTCTGCAGCCGAAGGCGGTTGTTCTTTTAAAGAATTAT
TGAAGACGAAGGTTTTTTTCTTTTTATTTTTTTAATGGCTTTACAGAATCTTAAATAGAATACAGTTTGACATGACGGCAAAAAATCTAC
CTGAGAAGAAAAGGAATAATAATAAATGAAACATCTGCAGTTGTGTATGCTCAGTTACTCACAGGTCGTAAATATCAAATAAATCAAAAT
GGTGAAGTTCGTCTAGAGAAACAGTGGTCAAAACAAGTTGTTCCTTTTGTTTATCAAACTATTGTCAAGGACATCCGAGCTTTCGACTCC
CGTTTCTCCAATATCAAAACATTGGATGATTTGTTTCCTCTGAGAAGTATGGTCTTTATGCTGGGAACTCCCTATTATGGCTGCACTGGA
GAAGTTCAGGATTCAGGTGATGTGATTACAGAAGGTAGGATTCGTGTGATTTTCAGCATTCCATGTGAACCCAATCTTGATGCTTTAATA
CAGAACCAGCATAAATATTCTATAAAGTACAACCCAGGATATGTGTTGGCCAGTCGCCTTGGAGTGAGTGGATACCTTGTTTCAAGGTTT
ACAGGAAGTATTTTTATTGGAAGAGGATCTAGGAGAAACCCTCATGGAGACCATAAAGCAAATGTGGGTTTAAATCTCAAATTCAACAAG
AAAAATGAGGAGGTACCTGGATATACTAAGAAAGTTGGAAGTGAATGGATGTATTCATCTGCAGCAGAACAACTTCTGGCAGAGTACTTA
GAGAGAGCTCCAGAACTATTTAGTTATATAGCCAAAAATAGCCAAGAGGATGTGTTCTATGAAGATGACATTTGGCCTGGAGAAAATGAG
AATGGTGCTGAAAAAGTTCAAGAAATTATTACTTGGCTAAAAGGACATCCTGTCAGTACTTTATCTCGTTCTTCTTGTGATTTACAAATT
CTGGATGCAGCTATTGTTGAGAAAATTGAGGAAGAAGTCGAAAAGTGCAAGCAAAGAAAGAATAATAAGAAGGTGCGAGTAACAGTGAAA
CCCCATTTGCTATACAGACCTTTAGAACAGCAACATGGAGTCATTCCTGATCGGGATGCAGAATTTTGTCTTTTTGACCGTGTTGTAAAT
GTGAGAGAAAACTTCTCAGTTCCAGTTGGCCTTCGAGGCACCATCATAGGAATAAAAGGAGCTAATAGAGAAGCCGATGTACTATTTGAA
GTATTATTTGATGAAGAATTTCCTGGAGGGTTAACAATAAGATGCTCACCTGGTAGAGGTTATCGACTGCCAACAAGTGCCTTGGTGAAC
CTTTCTCATGGGAGTCGCTCTGAAACTGGAAATCAGAAGTTGACAGCCATCGTAAAACCACAACCAGCTGTACATCAACATAGCTCAAGT
TCATCAGTTTCCTCTGGGCATTTGGGAGCCCTCAACCATTCCCCTCAATCACTTTTTGTTCCTACTCAAGTACCTACTAAAGATGATGAT
GAATTCTGCAACATTTGGCAGTCCTTACAGGGATCTGGAAAGATGCAATACTTTCAGCCAACTATACAAGAGAAGGGTGCAGTTCTACCT
CAAGAAATAAGCCAAGTAAATCAACATCATAAATCTGGCTTTAATGACAACAGTGTTAAATATCAGCAAAGAAAACATGACCCTCACAGA
AAATTTAAAGAAGAGTGTAAGAGTCCTAAAGCTGAGTGTTGGTCCCAAAAAATGTCCAATAAGCAGCCTAACTCTGGAATTGAGAACTTT
TTAGCATCTTTGAATATCTCCAAAGAAAATGAAGTACAGTCATCTCATCATGGGGAGCCTCCAAGTGAAGAGCATTTGTCACCACAGTCA
TTTGCCATGAAGGGAACACGGATGCTTAAAGAAATTCTAAAAATTGATGGCTCTAACACTGTGGACCATAAGAATGAAATCAAACAGATT
GCTAATGAAATCCCTGTTTCCTCTAACAGAAGAGATGAATATGGATTACCCTCTCAGCCTAAACAAAATAAGAAATTAGCATCTTATATG
AACAAGCCTCACAGTGCTAATGAGTACCATAATGTTCAGTCTATGGACAATATGTGTTGGCCTGCCCCCAGCCAGATCCCTCCTGTATCC
ACACCAGTAACTGAACTTTCTCGAATTTGTTCCCTTGTTGGAATGCCACAACCTGATTTCTCCTTTCTTAGGATGCCACAGACAATGACC
GTTTGCCAAGTAAAATTATCTAATGGCTTACTGGTACATGGGCCACAGTGCCACTCTGAAAATGAAGCCAAAGAGAAAGCTGCACTTTTT
GCTTTACAACAGTTGGGCTCCTTAGGCATGAATTTCCCTTTGCCTTCACAAGTATTTGCAAATTATCCTTCAGCTGTACCACCTGGAACC
ATTCCTCCAGCCTTTCCCCCACCTACTGCTAATATAATGCCTTCGTCGTCTCATCTCTTTGGCTCAATGCCATGGGGACCATCGGTGCCA
GTTCCTGGGAAGCCCTTCCATCATACTTTATATTCTGGGACCATGCCCATGGCTGGGGGAATACCAGGGGGTGTGCACAATCAGTTTATA
CCTCTGCAGGTTACTAAAAAAAGGGTTGCAAACAAAAAGAACTTTGAGAATAAGGAAGCCCAGAGTTCTCAAGCCACTCCAGTTCAGACT
AGCCAGCCAGATTCTTCCAACATTGTCAAAGTAAGTCCACGGGAGAGCTCATCAGCTTCTTTGAAGTCCTCTCCGATTGCTCAACCTGCA
TCTTCTTTTCAAGTTGAAACTGCCTCTCAAGGCCATAGTATATCTCACCATAAGTCAACACCAATCTCTTCTTCAAGAAGAAAATCAAGA
AAACTGGCTGTTAATTTTGGTGTTTCTAAACCTTCTGAGTAAATTTGGCTCTTAGAATTAAGTTAATTTCTTCTCTTTCCATCTACCTTT
TTATAAATACATATCTATGTCTCATAAAAATTAGAATGTACTATTTTAAAATAATATGTGTAAATTGAAATTTTTTTCATTTTTAAGTTA
TCAGGCACTTTTCATGCTGTTTAAAAGACTGTGTATCAAATTGTGCACTTTAAGTATGTGCAGTTTGTTGTATGTCAATTATACCTCAAT

>90310_90310_2_TFDP2-XRN1_TFDP2_chr3_141820576_ENST00000489671_XRN1_chr3_142103527_ENST00000392981_length(amino acids)=913AA_BP=1
MRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWSKQVVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTG
EVQDSGDVITEGRIRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFNK
KNEEVPGYTKKVGSEWMYSSAAEQLLAEYLERAPELFSYIAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQI
LDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRVVNVRENFSVPVGLRGTIIGIKGANREADVLFE
VLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSRSETGNQKLTAIVKPQPAVHQHSSSSSVSSGHLGALNHSPQSLFVPTQVPTKDDD
EFCNIWQSLQGSGKMQYFQPTIQEKGAVLPQEISQVNQHHKSGFNDNSVKYQQRKHDPHRKFKEECKSPKAECWSQKMSNKQPNSGIENF
LASLNISKENEVQSSHHGEPPSEEHLSPQSFAMKGTRMLKEILKIDGSNTVDHKNEIKQIANEIPVSSNRRDEYGLPSQPKQNKKLASYM
NKPHSANEYHNVQSMDNMCWPAPSQIPPVSTPVTELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQCHSENEAKEKAALF
ALQQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPTANIMPSSSHLFGSMPWGPSVPVPGKPFHHTLYSGTMPMAGGIPGGVHNQFI
PLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRESSSASLKSSPIAQPASSFQVETASQGHSISHHKSTPISSSRRKSR

--------------------------------------------------------------

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Fusion Gene PPI Analysis for TFDP2-XRN1


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with
HgeneTFDP2chr3:141820576chr3:142103527ENST00000310282-11060_820387.0CEBPA
HgeneTFDP2chr3:141820576chr3:142103527ENST00000397991-11060_820.0419.0CEBPA
HgeneTFDP2chr3:141820576chr3:142103527ENST00000467072-21460_820387.0CEBPA
HgeneTFDP2chr3:141820576chr3:142103527ENST00000477292-1860_820311.0CEBPA
HgeneTFDP2chr3:141820576chr3:142103527ENST00000479040-11060_820386.0CEBPA
HgeneTFDP2chr3:141820576chr3:142103527ENST00000486111-11160_820387.0CEBPA
HgeneTFDP2chr3:141820576chr3:142103527ENST00000489671-21360_825.0447.0CEBPA
HgeneTFDP2chr3:141820576chr3:142103527ENST00000495310-11060_820350.0CEBPA
HgeneTFDP2chr3:141820576chr3:142103527ENST00000499676-21360_820387.0CEBPA


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for TFDP2-XRN1


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for TFDP2-XRN1


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource