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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:TFRC-UBXN7 (FusionGDB2 ID:90405) |
Fusion Gene Summary for TFRC-UBXN7 |
Fusion gene summary |
Fusion gene information | Fusion gene name: TFRC-UBXN7 | Fusion gene ID: 90405 | Hgene | Tgene | Gene symbol | TFRC | UBXN7 | Gene ID | 7037 | 26043 |
Gene name | transferrin receptor | UBX domain protein 7 | |
Synonyms | CD71|IMD46|T9|TFR|TFR1|TR|TRFR|p90 | UBXD7 | |
Cytomap | 3q29 | 3q29 | |
Type of gene | protein-coding | protein-coding | |
Description | transferrin receptor protein 1 | UBX domain-containing protein 7UBX domain containing 7 | |
Modification date | 20200313 | 20200327 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000540528, ENST00000535031, ENST00000392396, ENST00000420415, ENST00000360110, ENST00000465288, | ENST00000296328, ENST00000428095, ENST00000535858, | |
Fusion gene scores | * DoF score | 11 X 12 X 8=1056 | 8 X 8 X 4=256 |
# samples | 15 | 8 | |
** MAII score | log2(15/1056*10)=-2.81557542886257 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(8/256*10)=-1.67807190511264 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: TFRC [Title/Abstract] AND UBXN7 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | TFRC(195796326)-UBXN7(196089558), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | TFRC-UBXN7 seems lost the major protein functional domain in Hgene partner, which is a CGC due to the frame-shifted ORF. TFRC-UBXN7 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | TFRC | GO:0006826 | iron ion transport | 7556058 |
Hgene | TFRC | GO:0030890 | positive regulation of B cell proliferation | 26642240 |
Hgene | TFRC | GO:0031623 | receptor internalization | 26642240 |
Hgene | TFRC | GO:0033572 | transferrin transport | 26642240 |
Hgene | TFRC | GO:0035690 | cellular response to drug | 16254249 |
Hgene | TFRC | GO:0042102 | positive regulation of T cell proliferation | 26642240 |
Hgene | TFRC | GO:0045830 | positive regulation of isotype switching | 26642240 |
Fusion gene breakpoints across TFRC (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across UBXN7 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | OV | TCGA-13-1511-01A | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
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Fusion Gene ORF analysis for TFRC-UBXN7 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
3UTR-3CDS | ENST00000540528 | ENST00000296328 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
3UTR-3CDS | ENST00000540528 | ENST00000428095 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
3UTR-3CDS | ENST00000540528 | ENST00000535858 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
5UTR-3CDS | ENST00000535031 | ENST00000296328 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
5UTR-3CDS | ENST00000535031 | ENST00000428095 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
5UTR-3CDS | ENST00000535031 | ENST00000535858 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
Frame-shift | ENST00000392396 | ENST00000296328 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
Frame-shift | ENST00000392396 | ENST00000428095 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
Frame-shift | ENST00000392396 | ENST00000535858 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
Frame-shift | ENST00000420415 | ENST00000296328 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
Frame-shift | ENST00000420415 | ENST00000428095 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
Frame-shift | ENST00000420415 | ENST00000535858 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
In-frame | ENST00000360110 | ENST00000296328 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
In-frame | ENST00000360110 | ENST00000428095 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
In-frame | ENST00000360110 | ENST00000535858 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
intron-3CDS | ENST00000465288 | ENST00000296328 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
intron-3CDS | ENST00000465288 | ENST00000428095 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
intron-3CDS | ENST00000465288 | ENST00000535858 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000360110 | TFRC | chr3 | 195796326 | - | ENST00000296328 | UBXN7 | chr3 | 196089558 | - | 10630 | 971 | 170 | 1606 | 478 |
ENST00000360110 | TFRC | chr3 | 195796326 | - | ENST00000428095 | UBXN7 | chr3 | 196089558 | - | 1674 | 971 | 170 | 1606 | 478 |
ENST00000360110 | TFRC | chr3 | 195796326 | - | ENST00000535858 | UBXN7 | chr3 | 196089558 | - | 1655 | 971 | 170 | 1606 | 478 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000360110 | ENST00000296328 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - | 8.98E-05 | 0.9999101 |
ENST00000360110 | ENST00000428095 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - | 0.001217761 | 0.9987822 |
ENST00000360110 | ENST00000535858 | TFRC | chr3 | 195796326 | - | UBXN7 | chr3 | 196089558 | - | 0.001382164 | 0.9986179 |
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Fusion Genomic Features for TFRC-UBXN7 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for TFRC-UBXN7 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr3:195796326/chr3:196089558) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TFRC | chr3:195796326 | chr3:196089558 | ENST00000360110 | - | 7 | 19 | 58_61 | 267 | 761.0 | Motif | Stop-transfer sequence |
Hgene | TFRC | chr3:195796326 | chr3:196089558 | ENST00000392396 | - | 7 | 19 | 58_61 | 267 | 761.0 | Motif | Stop-transfer sequence |
Hgene | TFRC | chr3:195796326 | chr3:196089558 | ENST00000360110 | - | 7 | 19 | 68_88 | 267 | 761.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Hgene | TFRC | chr3:195796326 | chr3:196089558 | ENST00000392396 | - | 7 | 19 | 68_88 | 267 | 761.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Tgene | UBXN7 | chr3:195796326 | chr3:196089558 | ENST00000296328 | 7 | 11 | 337_342 | 278 | 490.0 | Compositional bias | Note=Poly-Glu | |
Tgene | UBXN7 | chr3:195796326 | chr3:196089558 | ENST00000296328 | 7 | 11 | 285_304 | 278 | 490.0 | Domain | Note=UIM | |
Tgene | UBXN7 | chr3:195796326 | chr3:196089558 | ENST00000296328 | 7 | 11 | 408_485 | 278 | 490.0 | Domain | UBX |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TFRC | chr3:195796326 | chr3:196089558 | ENST00000360110 | - | 7 | 19 | 223_313 | 267 | 761.0 | Domain | Note=PA |
Hgene | TFRC | chr3:195796326 | chr3:196089558 | ENST00000392396 | - | 7 | 19 | 223_313 | 267 | 761.0 | Domain | Note=PA |
Hgene | TFRC | chr3:195796326 | chr3:196089558 | ENST00000360110 | - | 7 | 19 | 646_648 | 267 | 761.0 | Motif | Note=Cell attachment site%3B required for binding to transferrin |
Hgene | TFRC | chr3:195796326 | chr3:196089558 | ENST00000392396 | - | 7 | 19 | 646_648 | 267 | 761.0 | Motif | Note=Cell attachment site%3B required for binding to transferrin |
Hgene | TFRC | chr3:195796326 | chr3:196089558 | ENST00000360110 | - | 7 | 19 | 569_760 | 267 | 761.0 | Region | Note=Ligand-binding |
Hgene | TFRC | chr3:195796326 | chr3:196089558 | ENST00000392396 | - | 7 | 19 | 569_760 | 267 | 761.0 | Region | Note=Ligand-binding |
Hgene | TFRC | chr3:195796326 | chr3:196089558 | ENST00000360110 | - | 7 | 19 | 89_760 | 267 | 761.0 | Topological domain | Extracellular |
Hgene | TFRC | chr3:195796326 | chr3:196089558 | ENST00000392396 | - | 7 | 19 | 89_760 | 267 | 761.0 | Topological domain | Extracellular |
Tgene | UBXN7 | chr3:195796326 | chr3:196089558 | ENST00000296328 | 7 | 11 | 2_54 | 278 | 490.0 | Domain | Note=UBA |
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Fusion Gene Sequence for TFRC-UBXN7 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>90405_90405_1_TFRC-UBXN7_TFRC_chr3_195796326_ENST00000360110_UBXN7_chr3_196089558_ENST00000296328_length(transcript)=10630nt_BP=971nt CTCGCGAGCGTACGTGCCTCAGGAAGTGACGCACAGCCCCCCTGGGGGCCGGGGGCGGGGCCAGGCTATAAACCGCCGGTTAGGGGCCGC CATCCCCTCAGAGCGTCGGGATATCGGGTGGCGGCTCGGGACGGAGGACGCGCTAGTGTTCTTCTGTGTGGCAGTTCAGAATGATGGATC AAGCTAGATCAGCATTCTCTAACTTGTTTGGTGGAGAACCATTGTCATATACCCGGTTCAGCCTGGCTCGGCAAGTAGATGGCGATAACA GTCATGTGGAGATGAAACTTGCTGTAGATGAAGAAGAAAATGCTGACAATAACACAAAGGCCAATGTCACAAAACCAAAAAGGTGTAGTG GAAGTATCTGCTATGGGACTATTGCTGTGATCGTCTTTTTCTTGATTGGATTTATGATTGGCTACTTGGGCTATTGTAAAGGGGTAGAAC CAAAAACTGAGTGTGAGAGACTGGCAGGAACCGAGTCTCCAGTGAGGGAGGAGCCAGGAGAGGACTTCCCTGCAGCACGTCGCTTATATT GGGATGACCTGAAGAGAAAGTTGTCGGAGAAACTGGACAGCACAGACTTCACCGGCACCATCAAGCTGCTGAATGAAAATTCATATGTCC CTCGTGAGGCTGGATCTCAAAAAGATGAAAATCTTGCGTTGTATGTTGAAAATCAATTTCGTGAATTTAAACTCAGCAAAGTCTGGCGTG ATCAACATTTTGTTAAGATTCAGGTCAAAGACAGCGCTCAAAACTCGGTGATCATAGTTGATAAGAACGGTAGACTTGTTTACCTGGTGG AGAATCCTGGGGGTTATGTGGCGTATAGTAAGGCTGCAACAGTTACTGGTAAACTGGTCCATGCTAATTTTGGTACTAAAAAAGATTTTG AGGATTTATACACTCCTGTGAATGGATCTATAGTGATTGTCAGAGCAGGGAAAATCACCTTTGCAGAAAAGGAGAGCCTTATAGATGCAA GTGAAGACAGCCAGCTAGAAGCTGCCATCAGAGCCTCCTTACAAGAAACACATTTTGATTCAACACAGACAAAACAGGATAGCCGCTCAG ATGAAGAATCTGAATCTGAACTTTTTTCTGGCAGTGAGGAGTTCATATCCGTTTGTGGCTCTGATGAAGAAGAAGAGGTAGAGAATCTTG CCAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCATAGAAAAGAGGAGAATAGAAGGCCGCTGACTGAGCCACCAGTCAGAACTGATC CTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGGAGATGCCACCTGAAAAAGCAGATGGAGTAGTGGAGG GGATAGATGTAAATGGACCAAAAGCACAGCTGATGTTGCGGTATCCAGATGGAAAAAGGGAACAGATCACTCTTCCAGAGCAAGCTAAAC TGCTAGCTTTGGTGAAGCACGTGCAGTCTAAAGGATACCCAAATGAACGTTTTGAACTTCTCACCAACTTTCCTCGAAGGAAATTATCTC ATCTGGACTATGATATTACATTGCAAGAGGCAGGCCTTTGTCCTCAAGAGACTGTCTTTGTACAGGAAAGAAATTAACACCATGGCTTGA CCTCTCTCAGCTTACCCCTTTTTTCCCTTTTCCTGTGAGATACATGTCACTAAGTATGCATTTTGGCTCATAGGACCACAGAGCCAAAGT TGGGCAAGCAAGTCACCTTCCTTCTCTTATTTCTTGATCTCTCCTATAATCAGTCTCTTTCTCCCCCTTTGTTTCTTTCTCCTCTTCTGT TTTCTCGCTCCCCACTCCGTACCCTTCTGCCTCCCCCTCCCCCCACACTTTTCTTTCTTACCTAATCTGGTGACCAAACTGAAGTGTAAG GATAAGACCTCTCCTAGTACTAGCAGCAGGAATTGTGTGTTCCAGTAAGTGGTCTCTTGCACGGCACTTTTTTGGGATCAAATGTTAACG TTACTCCCCAGACTCTTCGGGCAAAGGAATGGCTAGATTCAGAGTAAGAACAACCCTCCCTTTTTTGTAAGTCCCCGTGTTTAGCAGGGA GAAGAAATTCTCTAACATGGGTTTGGTTTTGTTGTGTTCTTCATGTGGAAATGTCGCTTAACAAAATATCCAGGCTTTTGTTTACGTGGA AAAAGCATCCCTTGTAATGATTGCTCATCATACTTAAAAACCTTTTTCAAAGGATTTTCATGTTCCCAGCTATAAGGACTATTTCCATGA CATGTGTTATTGGCAGAATGAGTGTTAAATATGGAGCATATAGCATGGGGTGACTTTCATTGTCCTAACCTGAGACAGTTTTCCTTATTA CTCTGTATTGATCCTGCTAGTCCAAGAATGGACATGAAGTGAACCTATCGTGGTGACTGGGATAGGAAGGTGCTTGCTATTTTTGCCAGC ACAGCATATTAGTTCCTTTGGAGCCCTCCATTGTCTGAGTCTGCAGTGATCTGTAGGAAGGCAGCTGGTCAATAATCATGTAGTACAATG GCTTGGAATTGTAACCACTATGGTTATTGATTGTCCTGTGTTGTTTCAGGCATACTTAGGTATGTCCCTGGGGAAAAAGAAAACCATTCA GCTGAGAGTTGCTAACCATGTTCTTTTGGTTAGAAATAATGGTTCATTTTTTGCCCCTGGTTGGAATAGTCTCTAAAAGGCTCTGGTGAC TGAATTGAACATGAGTCCGCATGCTGTTTTCTTTCAAAAGGTATCAAAACGGAAAGCCTCTCTAAGGGGAAGACCTTTCAACTCCATTCA GAAGACAACATTTAGTAAGGAGGATGGCGGAGGTTACTAGTAATTTTCAGATGTCTTGGGCTTTTTCTGCCAACAAAACCCAAAATCAAA TTAGAGTTGGTGAAAGCTTTCTTCAGTGTTTTTAGAAGAGGCCATCTTGAATCTGTAGAATACCATTTACACATCAACTTCACCCTATGC TCATTTCGTATTTTGAGCTTAAATGGAGTCCTCTGAAGGGGGGGTAGTCGTGATTCTGGTGGCAAAACTAGAACTTTTAACTTGTAAAAT GAAAAATATTAAATGGACCTTTTTGTCAGTTGAGGATTTAGATTGATTCTTTTATCTGAGGAGCGTATGTTCCTCAGATGTTGCGTAGAG ACCTTTAGGTTTTCATCTACTTTAAGATTGCTCTCTTGGCAATTAGGGGATTTGGGAAAAGAAGAAAAAAAGATGCCATGTGTTGCTAGT ACACAGTTATAGGATATGGTTTCTAATGGTTGAATTTTGAGGAACTCTCCCTAAAGAATGAGTTTTATATCTCCTCAAGGAAATCATGGA AAAATCTGTTTATTCTTCAGTGAGTCCTTTTGAATTAATGTTCTTAAATTTTTTTCTAAGTCTGTGTAAGTGCTTATGTATAAGTATATA ATTGTATAAATATTTATAAATATATTTATATAATTACGGTTTCATTTCTACCTTGAGTCAAAGTTCTGTCTTTAGATTGGTGACTGAGTA ATACTTACACTTTGGTGTTTTTTCTTAGGTTCTTGAGGCTTACTTAACTAGCAGCTTCTGATTTATTGAGTGAAAGATGGTTTTCATGTT AATTCCTCAGTTGCATCTCTGAACTTGGATAACATACTTGCCGTTTGAAAAATAGAGCTGTATACTGTCAAAGGTGCACTGGAGGGTAAA ACATTTGTTGGTAGTAGACAAGCTCAGAAATCCAAAAATTCAGGGAGGGCACAGGGTAAGAAGAGAGGTTTGCTCAGCTTTGTGCTCTGA TGGCACCCATCTGTACTCCAGCAAAGTCATAGCTGAAGCCCAAATCGCTCAAACGTGTGAAGTCAATCATTTTTCCTATAGGGCTCTGTT TCCTTTTCTTTACCTTCTAGCTTCTCTTGATAAAACAGTTGGGAGAACTGCCAACGTGTTCATCAGTGAGAGGGTGTGGTTCTTTCCGAT ATGTTCAGCACGTGCATATTCATTTATGAGAAACCAAAGTAACTTCTTCAACTCGGGTTACTGTGGGATGATTAAGTAGATATAAAGTGA TTTAAAAGACAGCATGGTACTTTCACTCAGCTTAACATGCAGCTGGGATGTCTACAATACAAGATGTGGTGGGTTTTATTTTATTTTATT TTGAGGCAGGAGTGTAATTATCTTAGGGTTGATATAAAGGCCCATGGGAAGAGTTACGGATTGTACATGGGAAGAATCCATAAGGAGTAT TGCCTTGCTCAAGAATTTAATCCGCTGACAGTATGCTTCTTCCAGTTTGCCTTACTTCCTCTGCAAGTTTCTTTGCTCCTTAGGGCAGAG GTTTTATTGAATAGATTAAATGAGGTCAGTAAGATTAGTTAAAAATAGTCATTCCTTGTGGGTGTTGGACACAGCTTGAAAGGAGTGTTT AAAAAAAAAAAGCTAGGGAGGAAAAGAACAAGAAAGATAGACTTCGAGAGTGATAAGAGAAAAATACAGGGAGATGGAATGGAAACTACC AGGAAGGCCGGGCGCGGTGGCTCATGCCTGTAATCCCAACACTTTGGGAGGCGGAGGTGGGCAGATCACCTAAGGTCAGGAGATCGAGGC CAGCCTGAGCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTACCTGGGTGTGGTGGCGTGCACCTGTAATCCCAGCTACTC AGAGGCTGAGGCAGGGGAATGGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCGCACCATTACACTCCAGCCTGGGCGACAA AGCGACACTCCATCTCAAATTTAAAAAAAAAAAAGAAGAAGAAGAAGAAAACTAGTGGGAAAAAAGTGAGAGGAATACTTTTTTGAAATT GGTATCGGAAGGAACTGGAGAAGAGAAAACAACAGTGCCAAATGAGAAAAGAACAGGAAACTTAATACTAATTGGCATGCACCAGATACT TTTGTGTACATTTGCCTCTTCAATCTCCCGAAGAATCGTACAAAATGTATACTTTCTTCCCATGTTAAGAAAACAGGTATAGAGAACTTA TTCAGGACTCATAGCTAGTGAGTGGCAAATCAGAATTGGAATCCAGAGTCCATGCTGTGGTCTCCTTCAGCAAGAGAATCAAGCTACCCA GATGATTCTCTTCTCATTGTTTGGCTTTGTAAAGTGTCACTTAGTTTTGTTCCCATAAATATAGAGGAAGTAGTTGGGTTAAAGTTGTGG GATTTGCACTATGCCTATACATTTTTATTTATGCCATTATTTTGAGAGGCTGATTATTGCTTTTTTAAAATGATGCACTGGTGAAGATGT GAAAGTAAAATTGCCACGTGGCATTATTTGCCAAGAATAAATGAAAAGGGTAAAAAAACAATTTTTTCTTTTTTTAAACATTTTTCAGAA AAGATACAATTACCTTTTTTAATAGGTGAGCGCCACCACGCCCGGCTAATTTTTGCATTTTTAGTAGAGACAGGGTTTCACCATGTTGGC CAGGATGGTCTCGATCTCTTGATCTCGTGTTCCGCCCACCTCGGCCTCCTAAAGTGCTGGGATTACAGGCATGAGCCACTGCGCCCGATC TACAATTCTGTTTTCTGTGTCCCATCCATACCAGATTATTGAACCCTCTGTGTGTATGTTTTTAAATCTTGTATATAATTCTACTTCCTT GACTTACAAGTCAACAATTAGCTATTGAGTTCTTTATAGAAGTTGGAAGTATTTTGAAATCTGAGATCTAATTCCTGGCCAGGTGTGGTG GCTCATGCCTGTAATCCCAATATTTTGGGAGGCCGAGGTGGGTGGATCACCTGAGGTTGGGAGTTCGAGATCAGCCTGGCCAACATGGTG AAACCCCATCTCTACTGAAAAATACAAAAATTAGCCAGGCATGGTGGCTGTCTGTAATCCCAGCTAATGGGGAGGCTGAGGCACAAGAAT CTCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCACACCACTGCACTCCATCCTGGGCAATGGAGCGAGACTCTGTCTCAAAA AATAATAAATAAGATATGATTCCTGCCTGTTTTATCCAGTTAGAGAGACACACTACACATGAAATAATTGGAGAGCATGTAAATGTTTAC CTATTAGTTCAAACTTAGAAAAAGGGAAGAATATGTTTTAGTTAGCAAAGTCTTAAACAAGACTGAAGTGGCAAGCACTGTAGCTCACGT TTTCTTTTGACTCACCTTTTTCTTTAGCTCCACCTTTTGTAACTTCTAGATTTGGGGCATGAAGTTCTGCCACTAAGGCATAACCAGTAC CCAAGTAGGAAAGGATTATTGATCCCTGGAGTAAAGATTCCTAGCTTGCGGGGATCTCACTATTGATCCCCCGGAGTAAAGATTCCTAGC TCGCAGGAATCTTACTTGCACACTTAGGGAAAATACCAGAGGGAGCCACTAGCAACCGAAAAATGAAGGAAAGATTTAATTTCTCTACCC AGGTACAAATCCAATGCATAGTATAGTATATGTTATATGCAGAAAGGGCACTGGAGGTGTGAGAGCCCTTTGGGTAACAGCTCTGCTAGT TGTTACCTTCACACTTCTCTTTCTTCTTAATCTCTGGTTTCTCGTCTGAAAAATGAGATAATTGGACTAGATTAATAGTTCTCAGCCTTT TCTAGAACAACAAATTAGATTATCTCTGAAGTCCTTTTCCAAAATTTCATGCTTCCAGTCTCTCCCCGTGATTGCGTATTATCCCTAGGC TAATTAAAAGTGTGCTGGTTAATCAGTTTCTTTACTTTTTTTTTCTCTCTTTTTTTTATTCTGTGTTCAGGTATCATTTGACCAACAACT TGCTCTTAATCTTACTGCGATGACTGAAATCTCCAAAGAGGAGAGTATAGTAGTTATAGGTCTAGTAATAATAATCTTGTAAACAATTCA TTATTTTTTAAAACTTAATGCTGTGTGCCTAATCAGTGTTGAGTATGACTAAAATGTAAATGAGAACCAAATATGACACTAACGCTGGCA CTAAATTTTATTTTTACTTGTGTACTTAAAGTACTTTACTGGCCTGTTGGGAAATTGATTTGTATAAGATTCACACCTGGTTTTGGCAGA AACAGCTTTTTAAAGATACAATTAGGCTGACTTAAAAATGTTTTTTATTCCACAGAATGTATCTTTATTATGTCATTCTTACCGTCTCTC TGCCTTTTTTGACCATCATGTAACTACGCAGTAGTAAATCATGGGGTGCAGGCTGATGAATTAGTAGTCTTTGTAAAACTAAAATGTAAT GAGCATAGGAAGAGACAGCTCTTCTGGTGAACATGGCAGTTTTCCGGTAATACCAGCCTTGATGAATAGGCTAAAGACAGCTGTGTACTA TGGACATTCAACTTCACTGGATTGCCTGGCTTAGCTTTTCAGTTATTGTCTTGCCGTGAAACATGGTGTTGCACTGTACACATTTTAGAA TAGTGGCAAGAATGTTCTTTAGAACTGCAGATAACCCAACAGAGAATACCATACCAATATATCGGTTTCTCCTGTTACATAGAGATTTGG TATTTCAGTGATGGTTATGGTTTTTGACTCACCTGTGTGTCAGTCCTGCTAGAGAGACAGTATAGAATCAAGAATTTCTTGATGTCTTTT TAAAAATAGAGATTATAATGGCCTTGCTAGTTGTCCTGTGAAGTGACAGACCCTTAATTAGAAATCTTTTAATCCTGCTTTCCATTTTAC TTCTCCACCATTTATTTTTAACATTCATTCTCTGAAAATAGTTATGATTTTTAGTGTAATTGGCTATGTTTAAGAAATTCCATTTCAAAG TCTTAATATGTAACAATCTTCATTTTTTATAAAATTGAAGGACATTTTTGAGGCAAACTTACTTTTATAGCTCATTTTCTCCCTAGTTAA GGAGAATTCTCTGGTTTCATATAGAGAATGGCTAGCTCTGTGATACCCCACCCTCTTTGTGGCCTACCAGTTGCTGTTGTGTTGCTTAAA ATTGCAGATATTCTCATAAACATGATGATTTTTGGCACAGGCCTTTCTTTGCTATTGATTTCAAAATAAAGTTGGGCAATCCAATTTGAA CTACTTTAATAAACATAATTTAGCATTCCTGTAATGAGAAAGTATTTTCAAAAGATAACCAGATTTATTTCTAGGATTAGAGATGGCAAA TACCAATGATAGTATTTTTCCCAAGAGCAATCACAGATTAATCTATAAATATGAGAAGTCGCATTATTGTACTTAATTCTTTGGCAACAA ACAGCAAGTTTTTATTGTTTAATTGTATTTCCTCTCTAGAGATCACAATACTCTGGGTATTTTATATCCCTTCTAAAGGTCATTTGGGTT TTCAAATGGGAAGAATAGTCAAGCTAAGCTGGACTAAACCTAAGTAATATTTTTTCTCATCAAAAGAAGTTATTAATCTAACTGGGTTAG CATGAGTCATTCATTTTTTAGACATGATAAATGGGAAACATATCAAATCATTAGATAAATTCTGACCTGGAATTGAATTCCCCCTTTCTT AAAATCTTTTTAATTTGCTTTTTTCATAGACTCAGTATGGAACTCTTAACTGATAAGGGAGAGATTCTTGATCTGGAACCGTTCCCTGCC ATTCTCCTTTTTTCTCTCTATCTAGGTAGCTGGTTCCATAGTGCCCGTCACGAGGGTCCATTTCAGTTTGATGACATTAGACTGCTTACA CTCAGCTGGATGCCTTGCTGTTTGCAGCAACATGATTTTACAGTATGCTTTTCTCAAAGCTTTGCATTCTTAATGGAGATATCAAATGGT GTAATTCCAAATATAAATATGTTTATGACACTAATCATATGCTTTTAACAATAACTTTTTGATAACTTATTGCCCTGTAAGTTAAACCTT ACACGGAGTGACTGTTGCCATCAGAAAATCCCCTTTCACCTGCTAGAGAGAGTGAAAGTAGTGCGTGGCCTCCACTTTTCAGTTAACGAG TAGCAAGCTTCTAGTAGGGGCTGCTTATCTGACCCATGTGGGGTCTTGGGCCTTGTTACTTTCCTGGGTTCGTCCCTTCAGCTGGAAAGG CTGTTGAAAACACTTGCCAGGAAACAGTAAAGCTGTGAGAGAATCTTCTAGTCTTAGATATAGAGAAATGAGTACCAGTTGATGCTAACA CGATACTTAGACTTTGAGGGGCTTCCATCCAAGCTTTGGCATGAATCTGTTAGACACGGTTTTCTTCACTCCTCTGATAATCTTTTTTTC CAGAATGGTTTTTTGTTGTTGTTGTTGTTAACAAATTCTAAACATCCAGTGTTACTTTTTGTTTTGTTTGTTTTGTTTTGTTTTGTTTTG TTTTGTTTGCCCTTCAGGAAAGTCCTTTTTCGAGTAGGTATTGATTGTTCCCTGGAAACTCTCAGCAGTGTCTGTGCAGGCTCTGTGCAT GCTTTGTATGAGTTCGGCTTGAACAATGCATTTGAAGTCACCTGGGATGTCCAGTTCTGGCATGTCTTCATTGATTGTGTTTTTAAACAT GTTTCATGTTTCATGTCATTTTCCAAACCTCACTTTACATCTTACTCAGAGAAGTTAATCAAGGAATGAAATTTCTAGGGGGATAGGGAT GATGAGGGTGGGTTGGGGGCTTGAGTGAAGTCAACTTGGGGTATTTGCTTTAAAGTGTTTTCTAAAGCAGTTCCTAACAGTATTTAGAGA TTCCCTGGGATGTTTGTGGCTCAACTTATTCTGGACAAAGTGTGTGTGGGGGTGGTCTTACTGAGATTTGCATTCTTAATGCAGGACAGG CTCTAAATTTCATCTGTACTCTAAATTTGTGATTGAATCCAAGAAGATAACAGAGACAGTGCTCCTGTTGTAATGTTTCTGGCAAGTGCT CCCTAAAATGCACATCGAATTCTGTTTTCTGGGCCTTTTCTCCAATGGTGCTAGGAGATACCGTTGATTTCTGCAGCTCTTCTCAGTGGT GGGAAGAAGTCTTTGGGATTGTTGAGCAAGGGGCAGCTGGACCATCCACTAAATTTTTTTGTTCAAGACACATTAGAGACCCTCCTGTAT ATCTAGTAAGTCATAATAAAGGTGCTTGGGAAAGCCTTAAATTTGAAGACACATGGAGGCGGTAGAAAATTAAACTTGTAAGAGGAGAAA AACATGCCATTAGGTAACGCAGAGTTGTAACTACTGGCTAAGACTCAATGGAACTTCCACTTGCTCTAAAACCAGGGAAATCTTAGATAA CTGGGTGTGATCTACCTATAGATCTACCTAGTCTATAGGTAATAATTTCCAGAAGGAGGATCTTGCTGTCAGTTGGGGATCCTCTGGTTT GGTCTGTACCAAATTGTGAATACTCTTGCTGTGTTGTACCCAGTTGCTTTATATTAATACTGCAACTTGAAACGGGGAGGGTGGGGGGAC AATGGGGTGGGGGAGGGAAGGGAGTGGGACGATAAGTCTTTTGAAGACATCAGCTCACTGTGCTGAGAGAGGGACCAAACTCAAGGAAAC CTCTGATCTATACATTCAACTGCTGCATTTTTTTATAAATACATGTAAATGTCCTGTTGTAATATTTGATCTTGGAAATAAAAACAAAAA >90405_90405_1_TFRC-UBXN7_TFRC_chr3_195796326_ENST00000360110_UBXN7_chr3_196089558_ENST00000296328_length(amino acids)=478AA_BP=267 MMDQARSAFSNLFGGEPLSYTRFSLARQVDGDNSHVEMKLAVDEEENADNNTKANVTKPKRCSGSICYGTIAVIVFFLIGFMIGYLGYCK GVEPKTECERLAGTESPVREEPGEDFPAARRLYWDDLKRKLSEKLDSTDFTGTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSK VWRDQHFVKIQVKDSAQNSVIIVDKNGRLVYLVENPGGYVAYSKAATVTGKLVHANFGTKKDFEDLYTPVNGSIVIVRAGKITFAEKESL IDASEDSQLEAAIRASLQETHFDSTQTKQDSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPV RTDPGTATNHQGLPAVDSEILEMPPEKADGVVEGIDVNGPKAQLMLRYPDGKREQITLPEQAKLLALVKHVQSKGYPNERFELLTNFPRR -------------------------------------------------------------- >90405_90405_2_TFRC-UBXN7_TFRC_chr3_195796326_ENST00000360110_UBXN7_chr3_196089558_ENST00000428095_length(transcript)=1674nt_BP=971nt CTCGCGAGCGTACGTGCCTCAGGAAGTGACGCACAGCCCCCCTGGGGGCCGGGGGCGGGGCCAGGCTATAAACCGCCGGTTAGGGGCCGC CATCCCCTCAGAGCGTCGGGATATCGGGTGGCGGCTCGGGACGGAGGACGCGCTAGTGTTCTTCTGTGTGGCAGTTCAGAATGATGGATC AAGCTAGATCAGCATTCTCTAACTTGTTTGGTGGAGAACCATTGTCATATACCCGGTTCAGCCTGGCTCGGCAAGTAGATGGCGATAACA GTCATGTGGAGATGAAACTTGCTGTAGATGAAGAAGAAAATGCTGACAATAACACAAAGGCCAATGTCACAAAACCAAAAAGGTGTAGTG GAAGTATCTGCTATGGGACTATTGCTGTGATCGTCTTTTTCTTGATTGGATTTATGATTGGCTACTTGGGCTATTGTAAAGGGGTAGAAC CAAAAACTGAGTGTGAGAGACTGGCAGGAACCGAGTCTCCAGTGAGGGAGGAGCCAGGAGAGGACTTCCCTGCAGCACGTCGCTTATATT GGGATGACCTGAAGAGAAAGTTGTCGGAGAAACTGGACAGCACAGACTTCACCGGCACCATCAAGCTGCTGAATGAAAATTCATATGTCC CTCGTGAGGCTGGATCTCAAAAAGATGAAAATCTTGCGTTGTATGTTGAAAATCAATTTCGTGAATTTAAACTCAGCAAAGTCTGGCGTG ATCAACATTTTGTTAAGATTCAGGTCAAAGACAGCGCTCAAAACTCGGTGATCATAGTTGATAAGAACGGTAGACTTGTTTACCTGGTGG AGAATCCTGGGGGTTATGTGGCGTATAGTAAGGCTGCAACAGTTACTGGTAAACTGGTCCATGCTAATTTTGGTACTAAAAAAGATTTTG AGGATTTATACACTCCTGTGAATGGATCTATAGTGATTGTCAGAGCAGGGAAAATCACCTTTGCAGAAAAGGAGAGCCTTATAGATGCAA GTGAAGACAGCCAGCTAGAAGCTGCCATCAGAGCCTCCTTACAAGAAACACATTTTGATTCAACACAGACAAAACAGGATAGCCGCTCAG ATGAAGAATCTGAATCTGAACTTTTTTCTGGCAGTGAGGAGTTCATATCCGTTTGTGGCTCTGATGAAGAAGAAGAGGTAGAGAATCTTG CCAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCATAGAAAAGAGGAGAATAGAAGGCCGCTGACTGAGCCACCAGTCAGAACTGATC CTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGGAGATGCCACCTGAAAAAGCAGATGGAGTAGTGGAGG GGATAGATGTAAATGGACCAAAAGCACAGCTGATGTTGCGGTATCCAGATGGAAAAAGGGAACAGATCACTCTTCCAGAGCAAGCTAAAC TGCTAGCTTTGGTGAAGCACGTGCAGTCTAAAGGATACCCAAATGAACGTTTTGAACTTCTCACCAACTTTCCTCGAAGGAAATTATCTC ATCTGGACTATGATATTACATTGCAAGAGGCAGGCCTTTGTCCTCAAGAGACTGTCTTTGTACAGGAAAGAAATTAACACCATGGCTTGA >90405_90405_2_TFRC-UBXN7_TFRC_chr3_195796326_ENST00000360110_UBXN7_chr3_196089558_ENST00000428095_length(amino acids)=478AA_BP=267 MMDQARSAFSNLFGGEPLSYTRFSLARQVDGDNSHVEMKLAVDEEENADNNTKANVTKPKRCSGSICYGTIAVIVFFLIGFMIGYLGYCK GVEPKTECERLAGTESPVREEPGEDFPAARRLYWDDLKRKLSEKLDSTDFTGTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSK VWRDQHFVKIQVKDSAQNSVIIVDKNGRLVYLVENPGGYVAYSKAATVTGKLVHANFGTKKDFEDLYTPVNGSIVIVRAGKITFAEKESL IDASEDSQLEAAIRASLQETHFDSTQTKQDSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPV RTDPGTATNHQGLPAVDSEILEMPPEKADGVVEGIDVNGPKAQLMLRYPDGKREQITLPEQAKLLALVKHVQSKGYPNERFELLTNFPRR -------------------------------------------------------------- >90405_90405_3_TFRC-UBXN7_TFRC_chr3_195796326_ENST00000360110_UBXN7_chr3_196089558_ENST00000535858_length(transcript)=1655nt_BP=971nt CTCGCGAGCGTACGTGCCTCAGGAAGTGACGCACAGCCCCCCTGGGGGCCGGGGGCGGGGCCAGGCTATAAACCGCCGGTTAGGGGCCGC CATCCCCTCAGAGCGTCGGGATATCGGGTGGCGGCTCGGGACGGAGGACGCGCTAGTGTTCTTCTGTGTGGCAGTTCAGAATGATGGATC AAGCTAGATCAGCATTCTCTAACTTGTTTGGTGGAGAACCATTGTCATATACCCGGTTCAGCCTGGCTCGGCAAGTAGATGGCGATAACA GTCATGTGGAGATGAAACTTGCTGTAGATGAAGAAGAAAATGCTGACAATAACACAAAGGCCAATGTCACAAAACCAAAAAGGTGTAGTG GAAGTATCTGCTATGGGACTATTGCTGTGATCGTCTTTTTCTTGATTGGATTTATGATTGGCTACTTGGGCTATTGTAAAGGGGTAGAAC CAAAAACTGAGTGTGAGAGACTGGCAGGAACCGAGTCTCCAGTGAGGGAGGAGCCAGGAGAGGACTTCCCTGCAGCACGTCGCTTATATT GGGATGACCTGAAGAGAAAGTTGTCGGAGAAACTGGACAGCACAGACTTCACCGGCACCATCAAGCTGCTGAATGAAAATTCATATGTCC CTCGTGAGGCTGGATCTCAAAAAGATGAAAATCTTGCGTTGTATGTTGAAAATCAATTTCGTGAATTTAAACTCAGCAAAGTCTGGCGTG ATCAACATTTTGTTAAGATTCAGGTCAAAGACAGCGCTCAAAACTCGGTGATCATAGTTGATAAGAACGGTAGACTTGTTTACCTGGTGG AGAATCCTGGGGGTTATGTGGCGTATAGTAAGGCTGCAACAGTTACTGGTAAACTGGTCCATGCTAATTTTGGTACTAAAAAAGATTTTG AGGATTTATACACTCCTGTGAATGGATCTATAGTGATTGTCAGAGCAGGGAAAATCACCTTTGCAGAAAAGGAGAGCCTTATAGATGCAA GTGAAGACAGCCAGCTAGAAGCTGCCATCAGAGCCTCCTTACAAGAAACACATTTTGATTCAACACAGACAAAACAGGATAGCCGCTCAG ATGAAGAATCTGAATCTGAACTTTTTTCTGGCAGTGAGGAGTTCATATCCGTTTGTGGCTCTGATGAAGAAGAAGAGGTAGAGAATCTTG CCAAGTCCAGAAAGTCTCCCCACAAAGATTTGGGGCATAGAAAAGAGGAGAATAGAAGGCCGCTGACTGAGCCACCAGTCAGAACTGATC CTGGAACAGCCACAAACCACCAAGGATTGCCAGCTGTGGATTCAGAGATACTGGAGATGCCACCTGAAAAAGCAGATGGAGTAGTGGAGG GGATAGATGTAAATGGACCAAAAGCACAGCTGATGTTGCGGTATCCAGATGGAAAAAGGGAACAGATCACTCTTCCAGAGCAAGCTAAAC TGCTAGCTTTGGTGAAGCACGTGCAGTCTAAAGGATACCCAAATGAACGTTTTGAACTTCTCACCAACTTTCCTCGAAGGAAATTATCTC ATCTGGACTATGATATTACATTGCAAGAGGCAGGCCTTTGTCCTCAAGAGACTGTCTTTGTACAGGAAAGAAATTAACACCATGGCTTGA >90405_90405_3_TFRC-UBXN7_TFRC_chr3_195796326_ENST00000360110_UBXN7_chr3_196089558_ENST00000535858_length(amino acids)=478AA_BP=267 MMDQARSAFSNLFGGEPLSYTRFSLARQVDGDNSHVEMKLAVDEEENADNNTKANVTKPKRCSGSICYGTIAVIVFFLIGFMIGYLGYCK GVEPKTECERLAGTESPVREEPGEDFPAARRLYWDDLKRKLSEKLDSTDFTGTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSK VWRDQHFVKIQVKDSAQNSVIIVDKNGRLVYLVENPGGYVAYSKAATVTGKLVHANFGTKKDFEDLYTPVNGSIVIVRAGKITFAEKESL IDASEDSQLEAAIRASLQETHFDSTQTKQDSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKSRKSPHKDLGHRKEENRRPLTEPPV RTDPGTATNHQGLPAVDSEILEMPPEKADGVVEGIDVNGPKAQLMLRYPDGKREQITLPEQAKLLALVKHVQSKGYPNERFELLTNFPRR -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for TFRC-UBXN7 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for TFRC-UBXN7 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for TFRC-UBXN7 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |