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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:TMTC2-GNA14 (FusionGDB2 ID:92512)

Fusion Gene Summary for TMTC2-GNA14

check button Fusion gene summary
Fusion gene informationFusion gene name: TMTC2-GNA14
Fusion gene ID: 92512
HgeneTgene
Gene symbol

TMTC2

GNA14

Gene ID

160335

9630

Gene nametransmembrane O-mannosyltransferase targeting cadherins 2G protein subunit alpha 14
SynonymsIBDBP1-
Cytomap

12q21.31

9q21.2

Type of geneprotein-codingprotein-coding
Descriptionprotein O-mannosyl-transferase TMTC2transmembrane and TPR repeat-containing protein 2transmembrane and tetratricopeptide repeat containing 2guanine nucleotide-binding protein subunit alpha-14g alpha-14guanine nucleotide binding protein (G protein), alpha 14guanine nucleotide-binding protein 14
Modification date2020032920200313
UniProtAcc.

O95837

Ensembl transtripts involved in fusion geneENST00000321196, ENST00000548305, 
ENST00000549919, 
ENST00000464095, 
ENST00000341700, 
Fusion gene scores* DoF score11 X 7 X 5=3857 X 4 X 5=140
# samples 117
** MAII scorelog2(11/385*10)=-1.8073549220576
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(7/140*10)=-1
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: TMTC2 [Title/Abstract] AND GNA14 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointTMTC2(83290425)-GNA14(80144169), # samples:3
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across TMTC2 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across GNA14 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4SARCTCGA-DX-A48N-01ATMTC2chr12

83290425

-GNA14chr9

80144169

-
ChimerDB4SARCTCGA-DX-A48N-01ATMTC2chr12

83290425

+GNA14chr9

80144169

-
ChimerDB4SARCTCGA-DX-A48NTMTC2chr12

83290425

+GNA14chr9

80144169

-


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Fusion Gene ORF analysis for TMTC2-GNA14

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-intronENST00000321196ENST00000464095TMTC2chr12

83290425

+GNA14chr9

80144169

-
5CDS-intronENST00000548305ENST00000464095TMTC2chr12

83290425

+GNA14chr9

80144169

-
5CDS-intronENST00000549919ENST00000464095TMTC2chr12

83290425

+GNA14chr9

80144169

-
In-frameENST00000321196ENST00000341700TMTC2chr12

83290425

+GNA14chr9

80144169

-
In-frameENST00000548305ENST00000341700TMTC2chr12

83290425

+GNA14chr9

80144169

-
In-frameENST00000549919ENST00000341700TMTC2chr12

83290425

+GNA14chr9

80144169

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000321196TMTC2chr1283290425+ENST00000341700GNA14chr980144169-403421906503133827
ENST00000548305TMTC2chr1283290425+ENST00000341700GNA14chr980144169-391320695293012827
ENST00000549919TMTC2chr1283290425+ENST00000341700GNA14chr980144169-5114327016704213847

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000321196ENST00000341700TMTC2chr1283290425+GNA14chr980144169-0.000486870.99951315
ENST00000548305ENST00000341700TMTC2chr1283290425+GNA14chr980144169-0.0004567350.9995433
ENST00000549919ENST00000341700TMTC2chr1283290425+GNA14chr980144169-0.0002332870.99976677

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Fusion Genomic Features for TMTC2-GNA14


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for TMTC2-GNA14


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr12:83290425/chr9:80144169)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.GNA14

O95837

FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312462_492494837.0RepeatNote=TPR 1
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312108_128494837.0TransmembraneHelical
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312133_153494837.0TransmembraneHelical
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312163_183494837.0TransmembraneHelical
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312184_204494837.0TransmembraneHelical
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312222_241494837.0TransmembraneHelical
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312313_333494837.0TransmembraneHelical
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312400_420494837.0TransmembraneHelical
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312423_443494837.0TransmembraneHelical
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312450_470494837.0TransmembraneHelical
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+31285_105494837.0TransmembraneHelical
TgeneGNA14chr12:83290425chr9:80144169ENST0000034170007176_18241356.0Nucleotide bindingGTP
TgeneGNA14chr12:83290425chr9:80144169ENST0000034170007201_20541356.0Nucleotide bindingGTP
TgeneGNA14chr12:83290425chr9:80144169ENST0000034170007270_27341356.0Nucleotide bindingGTP
TgeneGNA14chr12:83290425chr9:80144169ENST000003417000742_4941356.0Nucleotide bindingGTP
TgeneGNA14chr12:83290425chr9:80144169ENST0000034170007174_18241356.0RegionG2 motif
TgeneGNA14chr12:83290425chr9:80144169ENST0000034170007197_20641356.0RegionG3 motif
TgeneGNA14chr12:83290425chr9:80144169ENST0000034170007266_27341356.0RegionG4 motif
TgeneGNA14chr12:83290425chr9:80144169ENST0000034170007325_33041356.0RegionG5 motif

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312493_526494837.0RepeatNote=TPR 2
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312527_560494837.0RepeatNote=TPR 3
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312562_594494837.0RepeatNote=TPR 4
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312606_639494837.0RepeatNote=TPR 5
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312643_676494837.0RepeatNote=TPR 6
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312677_710494837.0RepeatNote=TPR 7
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312712_744494837.0RepeatNote=TPR 8
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312746_778494837.0RepeatNote=TPR 9
HgeneTMTC2chr12:83290425chr9:80144169ENST00000321196+312779_812494837.0RepeatNote=TPR 10
TgeneGNA14chr12:83290425chr9:80144169ENST000003417000734_35541356.0DomainG-alpha
TgeneGNA14chr12:83290425chr9:80144169ENST000003417000737_5041356.0RegionG1 motif


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Fusion Gene Sequence for TMTC2-GNA14


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>92512_92512_1_TMTC2-GNA14_TMTC2_chr12_83290425_ENST00000321196_GNA14_chr9_80144169_ENST00000341700_length(transcript)=4034nt_BP=2190nt
GTCACGCAGGCGCGGGGGGCCGCGTCGAGAACCCCACGCGGGAGCTTCTGGAGTCTCCAGCCACCGCTTCTCACTTCACTGGAGAAGGGA
GCTGGGGCTGGGGCTGGGGCTGGGGCTGGGAGGGAGCTAATAAACATTGAATGTGCAGCAGCTGCCTTGGCGGCCGGAGTCCGCCCGAGC
GACACCGGAGCAGTGCGCCCGGGAGGCGGCGAGGGGAGGCGGTTCGCCTTGTCCCTCCCACCCGCGCCTCTTTCTCTCTCTTCCTCCAGC
TGGTCCCAGAGCCCGGCTTGGTCCGGTCCCTCTGCCCCCATCCCGCACCCTTCCACCTCCTCCGAGTCCCACTCCTCACCTAGGACGCCC
CAAACTGCCATGGGTTAGGGTGGGGATCGCGACCCGCGCGAAAGACCAGCCCTGCGCTTCCGCCGGGGGACGCGGAGCCCAAACGCCGCT
CACCGCTTGCGGGCGCCGGGCATGGGGAGTGTGGTGTGAGCCCGCACCCGGGGAGGACGCAGGAGCTGCGGAGACGGGCGCGAGGAGGAG
GAGAGGAGTCGTGGATTGGAAGGACCCGAGGGAGGGAGGGTGGGGAAGCGAGGGAAAAGTGAAGCTGGGAGGAGAAGGCGGCGGAAGGTG
GAGATTGATGCTTCTGTTTTTTGTTGCCGCTGCTGCCCTCGCGCTGGGAGCCGAGCCGGAGGGAAGGCGGTGGAGAGATGATTGCAGAGT
TGGTGAGCAGCGCTCTGGGGCTCGCCTTGTATCTCAACACCCTGAGTGCGGATTTCTGCTATGATGACAGCCGTGCTATCAAGACTAATC
AGGACCTTCTCCCAGAAACTCCATGGACGCACATTTTCTACAATGATTTTTGGGGGACTCTTCTAACCCACAGTGGCAGCCACAAGTCCT
ACCGGCCACTCTGCACTCTTTCTTTTCGCCTGAACCATGCCATTGGAGGGTTGAATCCCTGGAGCTACCATCTTGTCAATGTCCTGTTGC
ATGCAGCAGTCACTGGTCTCTTCACAAGCTTCTCCAAGATCCTCCTTGGTGATGGATACTGGACATTCATGGCTGGCTTGATGTTTGCTT
CTCACCCCATTCACACGGAGGCAGTGGCAGGAATCGTGGGACGAGCCGATGTCGGGGCCAGTCTCTTCTTTCTCCTCTCCTTGCTCTGCT
ACATTAAACACTGTTCTACAAGAGGCTACTCAGCCAGAACCTGGGGCTGGTTCCTGGGGTCAGGACTGTGCGCAGGATGCAGCATGTTGT
GGAAGGAACAAGGAGTGACTGTTCTCGCAGTTTCAGCAGTTTATGATGTCTTTGTCTTTCACAGGCTGAAAATAAAACAGATATTACCTA
CCATTTACAAAAGGAAGAACTTGTCGCTTTTCCTAAGCATTAGTTTGTTAATTTTCTGGGGTTCCTCCCTTTTGGGTGCCCGGTTATACT
GGATGGGAAACAAACCACCAAGCTTTTCCAACTCGGACAACCCCGCTGCTGATTCGGACAGCCTCCTCACCCGCACTCTCACCTTCTTCT
ACTTGCCAACCAAGAACCTCTGGCTGTTGCTATGTCCAGATACCCTCAGTTTTGATTGGTCAATGGATGCTGTGCCTCTGCTCAAAACAG
TTTGTGACTGGAGAAACCTACACACTGTGGCCTTCTATACTGGACTCCTTCTCCTTGCCTACTATGGTTTGAAGAGCCCGAGCGTAGACA
GAGAATGCAATGGGAAAACTGTAACAAATGGCAAGCAGAATGCAAATGGACATAGCTGCCTTTCAGATGTGGAGTACCAGAACTCAGAGA
CTAAGTCCAGCTTTGCATCCAAAGTAGAAAATGGCATTAAAAACGATGTATCACAGAGAACCCAGCTTCCTTCTACGGAGAACATTGTTG
TTCTGTCTTTATCTTTGTTAATCATACCCTTTGTTCCTGCCACGAACCTGTTTTTCTATGTCGGCTTTGTAATTGCAGAGCGAGTATTAT
ATATTCCTAGTATGGGCTTCTGCCTACTGATTACAGTGGGTGCTAGAGCCCTTTATGTCAAAGTCCAAAAGCGGTTCCTCAAGAGCTTGA
TTTTTTATGCTACAGCTACACTAATTGTTTTTTATGGACTCAAGACTGCGATCAGGAATGGAGACTGGCAGAATGAGGAAATGCTTTATA
GATCAGGGATAAAAGTAAACCCAGCTAAAGGAACTGGTGAAAGTGGGAAAAGCACCTTTATCAAGCAGATGAGAATTATCCATGGGTCTG
GTTACAGCGACGAAGACAGAAAGGGGTTCACGAAGCTGGTTTACCAAAACATATTCACCGCCATGCAAGCCATGATCAGAGCGATGGACA
CGCTAAGGATACAGTATGTGTGTGAACAGAATAAGGAAAATGCCCAGATAATCAGAGAAGTGGAAGTGGACAAGGTCTCCATGCTCTCCA
GGGAGCAGGTGGAGGCCATCAAGCAGCTCTGGCAAGATCCAGGCATCCAGGAGTGTTACGACAGGAGGAGGGAGTACCAGCTGTCGGACT
CTGCCAAATATTACCTGACTGACATTGACCGCATCGCCACACCATCATTCGTGCCTACCCAACAAGATGTGCTTCGCGTCCGAGTGCCCA
CCACCGGCATCATTGAGTATCCATTTGACTTGGAAAACATCATCTTTCGGATGGTGGATGTTGGTGGCCAACGATCGGAAAGACGGAAGT
GGATTCACTGCTTTGAGAGTGTCACCTCCATTATTTTCTTGGTTGCTCTGAGTGAATATGACCAGGTCCTGGCTGAGTGTGACAACGAGA
ATCGCATGGAAGAGAGCAAAGCCTTATTTAAAACCATCATCACCTACCCCTGGTTTCTGAATTCGTCTGTGATTTTATTCTTGAACAAGA
AGGATCTTTTGGAAGAGAAAATCATGTACTCTCATCTAATTAGCTATTTCCCAGAATACACAGGACCGAAACAGGATGTCAGAGCTGCCA
GAGACTTTATCCTGAAGCTTTACCAAGATCAGAATCCTGACAAAGAGAAAGTCATCTACTCTCACTTCACATGTGCTACAGATACAGACA
ATATTCGCTTTGTGTTTGCTGCTGTCAAAGACACAATTCTACAGCTAAACCTAAGGGAATTCAACCTTGTCTAAAAGCTGCTGCCCACTC
CTCCCCTATAACAGAAGATGTGATTTGCAAACTCCTTGTTTTATTTGCAAGTGCTTCTGACATCACCAGAGCCAGCCCCATGCCAGGAAC
TAAGGATGTCATGTAGATCGTGGGGACAGAGATGGGTGATGGAACTTGGAAGATATTTGAGTTTACCAACATACTTTAAAAGTCCTTACA
TCCCAAATTGTGTTTATAATTATTTTCTTGACTTTTGGCTATAAGATTTTGTGTAATTTTTGAATTTGGTGTTTTCTAGAATTTTTAAAA
GCCACTTTGATTTAGTTTTAAATATGTTTAAAAATAGCGATTAAAATTATGTAAGCAAGGAGCCTGTTAGTTTATAGATCATGCCTTCAA
ACCTCTAGAGTTAATTTGGGTGACTTTTTTAAAAATAAGAATGTTAATGGGTTTGAAGCTTTTTATTAAACCTTGTAATTTAGAGACATT
TTTAATTGTGTTTCTCACCTCATGCTGAAGGGTGACTCCTTTAACATGCCACCAAAGATTTTTTTTAAACACTTGGTTCTTTTTGTGTGT
TAACTTTCTAAGCCAAATTAATGGATATATAAGTATATCTAATTTAGCTTTGCCACAGTTTGATCACCAAGAAGCCAAAGCTGACATAGA
GTAAATGGGCTCTAGATAGCATATATGTTTTATTGGTGAAAAATGTGTGTGTGTGCACGTGTGTGTGTGTGTACATTTTTACCCCCAATG
TATATGACCAGATCTTAAAAATGTATGAAATGGCTAGAAGTCCACATTGTTTGACAAATGTTACGTAACCCTGCCAAAGTTCTGATGGCC

>92512_92512_1_TMTC2-GNA14_TMTC2_chr12_83290425_ENST00000321196_GNA14_chr9_80144169_ENST00000341700_length(amino acids)=827AA_BP=513
MLPLLPSRWEPSRREGGGEMIAELVSSALGLALYLNTLSADFCYDDSRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLCTL
SFRLNHAIGGLNPWSYHLVNVLLHAAVTGLFTSFSKILLGDGYWTFMAGLMFASHPIHTEAVAGIVGRADVGASLFFLLSLLCYIKHCST
RGYSARTWGWFLGSGLCAGCSMLWKEQGVTVLAVSAVYDVFVFHRLKIKQILPTIYKRKNLSLFLSISLLIFWGSSLLGARLYWMGNKPP
SFSNSDNPAADSDSLLTRTLTFFYLPTKNLWLLLCPDTLSFDWSMDAVPLLKTVCDWRNLHTVAFYTGLLLLAYYGLKSPSVDRECNGKT
VTNGKQNANGHSCLSDVEYQNSETKSSFASKVENGIKNDVSQRTQLPSTENIVVLSLSLLIIPFVPATNLFFYVGFVIAERVLYIPSMGF
CLLITVGARALYVKVQKRFLKSLIFYATATLIVFYGLKTAIRNGDWQNEEMLYRSGIKVNPAKGTGESGKSTFIKQMRIIHGSGYSDEDR
KGFTKLVYQNIFTAMQAMIRAMDTLRIQYVCEQNKENAQIIREVEVDKVSMLSREQVEAIKQLWQDPGIQECYDRRREYQLSDSAKYYLT
DIDRIATPSFVPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFESVTSIIFLVALSEYDQVLAECDNENRMEESK
ALFKTIITYPWFLNSSVILFLNKKDLLEEKIMYSHLISYFPEYTGPKQDVRAARDFILKLYQDQNPDKEKVIYSHFTCATDTDNIRFVFA

--------------------------------------------------------------
>92512_92512_2_TMTC2-GNA14_TMTC2_chr12_83290425_ENST00000548305_GNA14_chr9_80144169_ENST00000341700_length(transcript)=3913nt_BP=2069nt
GGGAGCTAATAAACATTGAATGTGCAGCAGCTGCCTTGGCGGCCGGAGTCCGCCCGAGCGACACCGGAGCAGTGCGCCCGGGAGGCGGCG
AGGGGAGGCGGTTCGCCTTGTCCCTCCCACCCGCGCCTCTTTCTCTCTCTTCCTCCAGCTGGTCCCAGAGCCCGGCTTGGTCCGGTCCCT
CTGCCCCCATCCCGCACCCTTCCACCTCCTCCGAGTCCCACTCCTCACCTAGGACGCCCCAAACTGCCATGGGTTAGGGTGGGGATCGCG
ACCCGCGCGAAAGACCAGCCCTGCGCTTCCGCCGGGGGACGCGGAGCCCAAACGCCGCTCACCGCTTGCGGGCGCCGGGCATGGGGAGTG
TGGTGTGAGCCCGCACCCGGGGAGGACGCAGGAGCTGCGGAGACGGGCGCGAGGAGGAGGAGAGGAGTCGTGGATTGGAAGGACCCGAGG
GAGGGAGGGTGGGGAAGCGAGGGAAAAGTGAAGCTGGGAGGAGAAGGCGGCGGAAGGTGGAGATTGATGCTTCTGTTTTTTGTTGCCGCT
GCTGCCCTCGCGCTGGGAGCCGAGCCGGAGGGAAGGCGGTGGAGAGATGATTGCAGAGTTGGTGAGCAGCGCTCTGGGGCTCGCCTTGTA
TCTCAACACCCTGAGTGCGGATTTCTGCTATGATGACAGCCGTGCTATCAAGACTAATCAGGACCTTCTCCCAGAAACTCCATGGACGCA
CATTTTCTACAATGATTTTTGGGGGACTCTTCTAACCCACAGTGGCAGCCACAAGTCCTACCGGCCACTCTGCACTCTTTCTTTTCGCCT
GAACCATGCCATTGGAGGGTTGAATCCCTGGAGCTACCATCTTGTCAATGTCCTGTTGCATGCAGCAGTCACTGGTCTCTTCACAAGCTT
CTCCAAGATCCTCCTTGGTGATGGATACTGGACATTCATGGCTGGCTTGATGTTTGCTTCTCACCCCATTCACACGGAGGCAGTGGCAGG
AATCGTGGGACGAGCCGATGTCGGGGCCAGTCTCTTCTTTCTCCTCTCCTTGCTCTGCTACATTAAACACTGTTCTACAAGAGGCTACTC
AGCCAGAACCTGGGGCTGGTTCCTGGGGTCAGGACTGTGCGCAGGATGCAGCATGTTGTGGAAGGAACAAGGAGTGACTGTTCTCGCAGT
TTCAGCAGTTTATGATGTCTTTGTCTTTCACAGGCTGAAAATAAAACAGATATTACCTACCATTTACAAAAGGAAGAACTTGTCGCTTTT
CCTAAGCATTAGTTTGTTAATTTTCTGGGGTTCCTCCCTTTTGGGTGCCCGGTTATACTGGATGGGAAACAAACCACCAAGCTTTTCCAA
CTCGGACAACCCCGCTGCTGATTCGGACAGCCTCCTCACCCGCACTCTCACCTTCTTCTACTTGCCAACCAAGAACCTCTGGCTGTTGCT
ATGTCCAGATACCCTCAGTTTTGATTGGTCAATGGATGCTGTGCCTCTGCTCAAAACAGTTTGTGACTGGAGAAACCTACACACTGTGGC
CTTCTATACTGGACTCCTTCTCCTTGCCTACTATGGTTTGAAGAGCCCGAGCGTAGACAGAGAATGCAATGGGAAAACTGTAACAAATGG
CAAGCAGAATGCAAATGGACATAGCTGCCTTTCAGATGTGGAGTACCAGAACTCAGAGACTAAGTCCAGCTTTGCATCCAAAGTAGAAAA
TGGCATTAAAAACGATGTATCACAGAGAACCCAGCTTCCTTCTACGGAGAACATTGTTGTTCTGTCTTTATCTTTGTTAATCATACCCTT
TGTTCCTGCCACGAACCTGTTTTTCTATGTCGGCTTTGTAATTGCAGAGCGAGTATTATATATTCCTAGTATGGGCTTCTGCCTACTGAT
TACAGTGGGTGCTAGAGCCCTTTATGTCAAAGTCCAAAAGCGGTTCCTCAAGAGCTTGATTTTTTATGCTACAGCTACACTAATTGTTTT
TTATGGACTCAAGACTGCGATCAGGAATGGAGACTGGCAGAATGAGGAAATGCTTTATAGATCAGGGATAAAAGTAAACCCAGCTAAAGG
AACTGGTGAAAGTGGGAAAAGCACCTTTATCAAGCAGATGAGAATTATCCATGGGTCTGGTTACAGCGACGAAGACAGAAAGGGGTTCAC
GAAGCTGGTTTACCAAAACATATTCACCGCCATGCAAGCCATGATCAGAGCGATGGACACGCTAAGGATACAGTATGTGTGTGAACAGAA
TAAGGAAAATGCCCAGATAATCAGAGAAGTGGAAGTGGACAAGGTCTCCATGCTCTCCAGGGAGCAGGTGGAGGCCATCAAGCAGCTCTG
GCAAGATCCAGGCATCCAGGAGTGTTACGACAGGAGGAGGGAGTACCAGCTGTCGGACTCTGCCAAATATTACCTGACTGACATTGACCG
CATCGCCACACCATCATTCGTGCCTACCCAACAAGATGTGCTTCGCGTCCGAGTGCCCACCACCGGCATCATTGAGTATCCATTTGACTT
GGAAAACATCATCTTTCGGATGGTGGATGTTGGTGGCCAACGATCGGAAAGACGGAAGTGGATTCACTGCTTTGAGAGTGTCACCTCCAT
TATTTTCTTGGTTGCTCTGAGTGAATATGACCAGGTCCTGGCTGAGTGTGACAACGAGAATCGCATGGAAGAGAGCAAAGCCTTATTTAA
AACCATCATCACCTACCCCTGGTTTCTGAATTCGTCTGTGATTTTATTCTTGAACAAGAAGGATCTTTTGGAAGAGAAAATCATGTACTC
TCATCTAATTAGCTATTTCCCAGAATACACAGGACCGAAACAGGATGTCAGAGCTGCCAGAGACTTTATCCTGAAGCTTTACCAAGATCA
GAATCCTGACAAAGAGAAAGTCATCTACTCTCACTTCACATGTGCTACAGATACAGACAATATTCGCTTTGTGTTTGCTGCTGTCAAAGA
CACAATTCTACAGCTAAACCTAAGGGAATTCAACCTTGTCTAAAAGCTGCTGCCCACTCCTCCCCTATAACAGAAGATGTGATTTGCAAA
CTCCTTGTTTTATTTGCAAGTGCTTCTGACATCACCAGAGCCAGCCCCATGCCAGGAACTAAGGATGTCATGTAGATCGTGGGGACAGAG
ATGGGTGATGGAACTTGGAAGATATTTGAGTTTACCAACATACTTTAAAAGTCCTTACATCCCAAATTGTGTTTATAATTATTTTCTTGA
CTTTTGGCTATAAGATTTTGTGTAATTTTTGAATTTGGTGTTTTCTAGAATTTTTAAAAGCCACTTTGATTTAGTTTTAAATATGTTTAA
AAATAGCGATTAAAATTATGTAAGCAAGGAGCCTGTTAGTTTATAGATCATGCCTTCAAACCTCTAGAGTTAATTTGGGTGACTTTTTTA
AAAATAAGAATGTTAATGGGTTTGAAGCTTTTTATTAAACCTTGTAATTTAGAGACATTTTTAATTGTGTTTCTCACCTCATGCTGAAGG
GTGACTCCTTTAACATGCCACCAAAGATTTTTTTTAAACACTTGGTTCTTTTTGTGTGTTAACTTTCTAAGCCAAATTAATGGATATATA
AGTATATCTAATTTAGCTTTGCCACAGTTTGATCACCAAGAAGCCAAAGCTGACATAGAGTAAATGGGCTCTAGATAGCATATATGTTTT
ATTGGTGAAAAATGTGTGTGTGTGCACGTGTGTGTGTGTGTACATTTTTACCCCCAATGTATATGACCAGATCTTAAAAATGTATGAAAT
GGCTAGAAGTCCACATTGTTTGACAAATGTTACGTAACCCTGCCAAAGTTCTGATGGCCACCACAGATTTGCTGTTTGAATTATGTATGC

>92512_92512_2_TMTC2-GNA14_TMTC2_chr12_83290425_ENST00000548305_GNA14_chr9_80144169_ENST00000341700_length(amino acids)=827AA_BP=513
MLPLLPSRWEPSRREGGGEMIAELVSSALGLALYLNTLSADFCYDDSRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLCTL
SFRLNHAIGGLNPWSYHLVNVLLHAAVTGLFTSFSKILLGDGYWTFMAGLMFASHPIHTEAVAGIVGRADVGASLFFLLSLLCYIKHCST
RGYSARTWGWFLGSGLCAGCSMLWKEQGVTVLAVSAVYDVFVFHRLKIKQILPTIYKRKNLSLFLSISLLIFWGSSLLGARLYWMGNKPP
SFSNSDNPAADSDSLLTRTLTFFYLPTKNLWLLLCPDTLSFDWSMDAVPLLKTVCDWRNLHTVAFYTGLLLLAYYGLKSPSVDRECNGKT
VTNGKQNANGHSCLSDVEYQNSETKSSFASKVENGIKNDVSQRTQLPSTENIVVLSLSLLIIPFVPATNLFFYVGFVIAERVLYIPSMGF
CLLITVGARALYVKVQKRFLKSLIFYATATLIVFYGLKTAIRNGDWQNEEMLYRSGIKVNPAKGTGESGKSTFIKQMRIIHGSGYSDEDR
KGFTKLVYQNIFTAMQAMIRAMDTLRIQYVCEQNKENAQIIREVEVDKVSMLSREQVEAIKQLWQDPGIQECYDRRREYQLSDSAKYYLT
DIDRIATPSFVPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFESVTSIIFLVALSEYDQVLAECDNENRMEESK
ALFKTIITYPWFLNSSVILFLNKKDLLEEKIMYSHLISYFPEYTGPKQDVRAARDFILKLYQDQNPDKEKVIYSHFTCATDTDNIRFVFA

--------------------------------------------------------------
>92512_92512_3_TMTC2-GNA14_TMTC2_chr12_83290425_ENST00000549919_GNA14_chr9_80144169_ENST00000341700_length(transcript)=5114nt_BP=3270nt
TCTAGAGTTATCAATCTGAATTATAAATTTTGTAAAATTATTCACAAAAGCACTTATTTTGTAAGTGTAGTGTAGAATGTTAGATGTATG
ACCTATAATTAATTCCATTAATCCTCAAATAAAACTGTGGAATCATTTTCCTTTCAAACAGCAGTTTAAATTCAAACTGTATTACCATTA
GCATAAGAATAGCTTTTAACAATAATTAAAATCCTAATGGTATCATGAAATAATTTTAGTTTAGTTATCCTTTTGATGTAAATATTTATC
CAGTGGGAGAACCTGATTTGTTAAACATTTTATATGAATTTGATTTGAGAAATGCACAGCACCATATAAATATATCACTGTAGGAGGCAG
TGTAGCCATAAGGAAAACATACCGGATTGAGTGTCAAGAACTGGTGTCTGTATGGTGCTGTACTGCACAAGCTTCATATGACCTTAATTT
CCGAGCATCAGTTTCATCATTGGTTAAAAAAAAAGAGATGACAGTATCAGACTTGCCTCACGGCTGTCTGCCAATTAAGTGAATTAGAAA
ATTATTTTCAATTATATAGTGCTGGGCAAGGTGAATGATTGCTATTACTGTTGTCATCACTGTTGTTTGAAGCACTGTGCTTTGGGAAGC
AAATCTGGTTCACATCTTTTGAACATTTAAATGAAGAGAATGTGTCTCAGTGCTCTAGTGTGTATTAAAACAGCCTTTTAACAAGAATGT
TTTGAACCCTGCCCAATACCTGCACATGCTTTTGTTAATACTTCATTACATAAAATGACCAAGAAGCTGTCATAAGAATTTAAAGGAACA
TTTACCCTCATCTTTAAAATGTATCTTAAAAGAGAGATAAGATTCTAATTACAAATTTTGAACAGTTTATTTTCTCTCTATGAAAAATTT
CCAAGAATGATACAAAAGCACTTTTATGTGAAGAGGATACACTGGAACATTGAGGTCTTGATCTCATTTTAGTAACTCTCTGATGTGATT
AATTCATAAGCACTGAGTTGTAGCTCATTCCTTCTGGCAAAATTCCAGCACTTGATTGTTACCTTATAAACTTTTAATAAGAGTAATTTT
AAAAACTGCACTTGACTCTTGCTTTATGAAAAGCTGGAAATGTAAAAAGTTAAAAATGCTTGACAATTTTTCTGAGCTCTAGTCAGAAAC
AGTGGCTATGCCCTTTTATAGATGACAGCCCAAAGGCGAGTTTGTAAAACGATAAATAAATTGTAAAGATCTATCGAGTGGCAACTTGGA
TGGTTTAATGCCTATGGGTTAGAAACCCAGGAGTTAATGTTTAAAGTGATTTGGATAAATGTGAACATGTTTAAATCTTTAGTATTATTC
CTTTAAGCCAAATGTGAACGATAGTTATTTTGACAAAGTTTGGGTTACCTCGATAGCCTGATTTTTACAGAAGTACCGTGTATCTCAAAT
TGTTAACTGATGAATGGGTGGTGCTGCTGGATTATTTCCTGTGTTTTGTGTTTTTCTTAGTTTTAATTTCTTTGTTATTCAAGTTATACT
ATCACCTCGTCCAAAGTTGGGTCTCAGGATTAGATTAATAAACTAACCAAGTAAATTTGGGAAGTATGACTAACTTACATAAAGAAAATA
ATTGGGGTTATTTTTTTGTATTATTATTTTAAAATATGTAATCAGCACTTTTGAGAAGCTCTCATTTTGTTGAATCTCTAGGCAGACCTT
TGTGGTTAAGCATCATCCTGGAAATTTTTTCTGACAGTCATTTGACCAGGTCTTTCTGTTTATACTCAGTGTCAAAACAACAACAACAAA
AATGCATGGAACCATCTAGTTGCAGGAAAACAAGCTCAGGACTCAGGACTCCCACTGATTATACATTATGCCGTGCTATCAAGACTAATC
AGGACCTTCTCCCAGAAACTCCATGGACGCACATTTTCTACAATGATTTTTGGGGGACTCTTCTAACCCACAGTGGCAGCCACAAGTCCT
ACCGGCCACTCTGCACTCTTTCTTTTCGCCTGAACCATGCCATTGGAGGGTTGAATCCCTGGAGCTACCATCTTGTCAATGTCCTGTTGC
ATGCAGCAGTCACTGGTCTCTTCACAAGCTTCTCCAAGATCCTCCTTGGTGATGGATACTGGACATTCATGGCTGGCTTGATGTTTGCTT
CTCACCCCATTCACACGGAGGCAGTGGCAGGAATCGTGGGACGAGCCGATGTCGGGGCCAGTCTCTTCTTTCTCCTCTCCTTGCTCTGCT
ACATTAAACACTGTTCTACAAGAGGCTACTCAGCCAGAACCTGGGGCTGGTTCCTGGGGTCAGGACTGTGCGCAGGATGCAGCATGTTGT
GGAAGGAACAAGGAGTGACTGTTCTCGCAGTTTCAGCAGTTTATGATGTCTTTGTCTTTCACAGGCTGAAAATAAAACAGATATTACCTA
CCATTTACAAAAGGAAGAACTTGTCGCTTTTCCTAAGCATTAGTTTGTTAATTTTCTGGGGTTCCTCCCTTTTGGGTGCCCGGTTATACT
GGATGGGAAACAAACCACCAAGCTTTTCCAACTCGGACAACCCCGCTGCTGATTCGGACAGCCTCCTCACCCGCACTCTCACCTTCTTCT
ACTTGCCAACCAAGAACCTCTGGCTGTTGCTATGTCCAGATACCCTCAGTTTTGATTGGTCAATGGATGCTGTGCCTCTGCTCAAAACAG
TTTGTGACTGGAGAAACCTACACACTGTGGCCTTCTATACTGGACTCCTTCTCCTTGCCTACTATGGTTTGAAGAGCCCGAGCGTAGACA
GAGAATGCAATGGGAAAACTGTAACAAATGGCAAGCAGAATGCAAATGGACATAGCTGCCTTTCAGATGTGGAGTACCAGAACTCAGAGA
CTAAGTCCAGCTTTGCATCCAAAGTAGAAAATGGCATTAAAAACGATGTATCACAGAGAACCCAGCTTCCTTCTACGGAGAACATTGTTG
TTCTGTCTTTATCTTTGTTAATCATACCCTTTGTTCCTGCCACGAACCTGTTTTTCTATGTCGGCTTTGTAATTGCAGAGCGAGTATTAT
ATATTCCTAGTATGGGCTTCTGCCTACTGATTACAGTGGGTGCTAGAGCCCTTTATGTCAAAGTCCAAAAGCGGTTCCTCAAGAGCTTGA
TTTTTTATGCTACAGCTACACTAATTGTTTTTTATGGACTCAAGACTGCGATCAGGAATGGAGACTGGCAGAATGAGGAAATGCTTTATA
GATCAGGGATAAAAGTAAACCCAGCTAAAGGAACTGGTGAAAGTGGGAAAAGCACCTTTATCAAGCAGATGAGAATTATCCATGGGTCTG
GTTACAGCGACGAAGACAGAAAGGGGTTCACGAAGCTGGTTTACCAAAACATATTCACCGCCATGCAAGCCATGATCAGAGCGATGGACA
CGCTAAGGATACAGTATGTGTGTGAACAGAATAAGGAAAATGCCCAGATAATCAGAGAAGTGGAAGTGGACAAGGTCTCCATGCTCTCCA
GGGAGCAGGTGGAGGCCATCAAGCAGCTCTGGCAAGATCCAGGCATCCAGGAGTGTTACGACAGGAGGAGGGAGTACCAGCTGTCGGACT
CTGCCAAATATTACCTGACTGACATTGACCGCATCGCCACACCATCATTCGTGCCTACCCAACAAGATGTGCTTCGCGTCCGAGTGCCCA
CCACCGGCATCATTGAGTATCCATTTGACTTGGAAAACATCATCTTTCGGATGGTGGATGTTGGTGGCCAACGATCGGAAAGACGGAAGT
GGATTCACTGCTTTGAGAGTGTCACCTCCATTATTTTCTTGGTTGCTCTGAGTGAATATGACCAGGTCCTGGCTGAGTGTGACAACGAGA
ATCGCATGGAAGAGAGCAAAGCCTTATTTAAAACCATCATCACCTACCCCTGGTTTCTGAATTCGTCTGTGATTTTATTCTTGAACAAGA
AGGATCTTTTGGAAGAGAAAATCATGTACTCTCATCTAATTAGCTATTTCCCAGAATACACAGGACCGAAACAGGATGTCAGAGCTGCCA
GAGACTTTATCCTGAAGCTTTACCAAGATCAGAATCCTGACAAAGAGAAAGTCATCTACTCTCACTTCACATGTGCTACAGATACAGACA
ATATTCGCTTTGTGTTTGCTGCTGTCAAAGACACAATTCTACAGCTAAACCTAAGGGAATTCAACCTTGTCTAAAAGCTGCTGCCCACTC
CTCCCCTATAACAGAAGATGTGATTTGCAAACTCCTTGTTTTATTTGCAAGTGCTTCTGACATCACCAGAGCCAGCCCCATGCCAGGAAC
TAAGGATGTCATGTAGATCGTGGGGACAGAGATGGGTGATGGAACTTGGAAGATATTTGAGTTTACCAACATACTTTAAAAGTCCTTACA
TCCCAAATTGTGTTTATAATTATTTTCTTGACTTTTGGCTATAAGATTTTGTGTAATTTTTGAATTTGGTGTTTTCTAGAATTTTTAAAA
GCCACTTTGATTTAGTTTTAAATATGTTTAAAAATAGCGATTAAAATTATGTAAGCAAGGAGCCTGTTAGTTTATAGATCATGCCTTCAA
ACCTCTAGAGTTAATTTGGGTGACTTTTTTAAAAATAAGAATGTTAATGGGTTTGAAGCTTTTTATTAAACCTTGTAATTTAGAGACATT
TTTAATTGTGTTTCTCACCTCATGCTGAAGGGTGACTCCTTTAACATGCCACCAAAGATTTTTTTTAAACACTTGGTTCTTTTTGTGTGT
TAACTTTCTAAGCCAAATTAATGGATATATAAGTATATCTAATTTAGCTTTGCCACAGTTTGATCACCAAGAAGCCAAAGCTGACATAGA
GTAAATGGGCTCTAGATAGCATATATGTTTTATTGGTGAAAAATGTGTGTGTGTGCACGTGTGTGTGTGTGTACATTTTTACCCCCAATG
TATATGACCAGATCTTAAAAATGTATGAAATGGCTAGAAGTCCACATTGTTTGACAAATGTTACGTAACCCTGCCAAAGTTCTGATGGCC

>92512_92512_3_TMTC2-GNA14_TMTC2_chr12_83290425_ENST00000549919_GNA14_chr9_80144169_ENST00000341700_length(amino acids)=847AA_BP=533
MRSSHFVESLGRPLWLSIILEIFSDSHLTRSFCLYSVSKQQQQKCMEPSSCRKTSSGLRTPTDYTLCRAIKTNQDLLPETPWTHIFYNDF
WGTLLTHSGSHKSYRPLCTLSFRLNHAIGGLNPWSYHLVNVLLHAAVTGLFTSFSKILLGDGYWTFMAGLMFASHPIHTEAVAGIVGRAD
VGASLFFLLSLLCYIKHCSTRGYSARTWGWFLGSGLCAGCSMLWKEQGVTVLAVSAVYDVFVFHRLKIKQILPTIYKRKNLSLFLSISLL
IFWGSSLLGARLYWMGNKPPSFSNSDNPAADSDSLLTRTLTFFYLPTKNLWLLLCPDTLSFDWSMDAVPLLKTVCDWRNLHTVAFYTGLL
LLAYYGLKSPSVDRECNGKTVTNGKQNANGHSCLSDVEYQNSETKSSFASKVENGIKNDVSQRTQLPSTENIVVLSLSLLIIPFVPATNL
FFYVGFVIAERVLYIPSMGFCLLITVGARALYVKVQKRFLKSLIFYATATLIVFYGLKTAIRNGDWQNEEMLYRSGIKVNPAKGTGESGK
STFIKQMRIIHGSGYSDEDRKGFTKLVYQNIFTAMQAMIRAMDTLRIQYVCEQNKENAQIIREVEVDKVSMLSREQVEAIKQLWQDPGIQ
ECYDRRREYQLSDSAKYYLTDIDRIATPSFVPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFESVTSIIFLVAL
SEYDQVLAECDNENRMEESKALFKTIITYPWFLNSSVILFLNKKDLLEEKIMYSHLISYFPEYTGPKQDVRAARDFILKLYQDQNPDKEK

--------------------------------------------------------------

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Fusion Gene PPI Analysis for TMTC2-GNA14


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for TMTC2-GNA14


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for TMTC2-GNA14


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource